ClCG11G007250.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG11G007250.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr11: 8136271 .. 8138844 (+)
Sequence length1152
RNA-Seq ExpressionClCG11G007250.1
SyntenyClCG11G007250.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAATTTGCATCTCAAAATTTCTAAAAGGACTTTTAAGTGTGGCCTCTCAGCTCAAAACGAAGACAAAAAGTGCGTAAGTGACAGTTTCAACCTCAGCTCGTCATACAGAGTGGATACAAGTGACATATATACTATACCACTAATTACAAAATCAAAATCAATTCACTATCCTATCAACAAACCCACTCTTTTACTCTCTCTTTTTCAATTTTTGTTGGTTTTATTAAAATGCGGGGTATGTATGCAGAAACAATGACTACTTGGCCAGTTTTTAAGATGCCAATCTTCATACTTTCTCTCTATCTATTCATTTCAACCATTTGTTCTTTTTATATACTAAAGAACACATTCCTTCCTCCGAAAACTAGAGAAGTGACATTAAAGTGAGAATCAAAAGACCAAACTTACCCAAATGGAAGAGCAAGTAGGAAAGTAACCACAGGGACAATGTTAACCAATGCACAAGCGAAAGTAGCAAATGTATGTTGAATTTCTAGAAGAAAGCATTATTGAGTTAGTGAAGCCTTGAATTAAGAACACAAACAACAAACCAATCAACAAATAAACGAAAAGAAAAACATGTAATTGCTATTTGCAGTTTGAAATTTAATGAAGAATAGAGGCTGGACTCACGAGAGGATGGAGACCGAGAGGCTGGACTCACGAGAGTGGAGAGTGAGACTGAGAGGCAAGAGGAGAGCGAGTGGAGAAGGAGACCGAAAGGCGAGAGGAGAGCGAGTGGAGAGGGAGACCGAGAGGCAACAGGAGAGCGAGACACCAGAGAGACCAAGAGGCGACAGGAGATCAATTGGAGAGGGAGACCGAGAGACGAGAAGAGAGCGAGACGCCAGAGAGACCAAGAGGCGACAGGAGATCGATTGGAGAGGGAGACCGAGAGACGAGAGGAGAGCGAGACGCCGTCAATGGTGGTCTGAGACGGGAGTGAAGGAGGCAATCGATGGAGGTTGAGACGGGAGTGAGCAGTCCAGTGAGAGGTGAAGGAGACCGGGAGCGGCGCGCACAGTCGAGGATATTTTGGCCAAATCAAAATAAAACCCTAAAAAATTAATAAATTTATAATAATATATTTAAAAAGTGATTTAAAAATTTAGATAATGTATTTTATATAACTAATTTTGTGAAGAAATAAAAAAGATAAGTTAAATAAATTAAATTGAAAAAAAAAACTAGATCAATTTTTTGTTTTTTTTTTTCTTGCACTCACAATTGCTCGAGCCACATCAAGCCAATCTCTCCACTTTACTCCCAATCTCTACATTTATTCAAATTCGTGCTCATATGTAAGCCCCGTACTTAATCTTGTGAGAAAGCAAGATAAGAAGAGACCAAGAGATGGGTGCTTGGGTAGGAGTAGTTGGCTGGAATGTGATTGGGGGCAGAAAATGGCTAAGTATCAGCTATGCGTTGGTGGCAACACGCCTTGATGGAAGTAGCTTTGGCGTGGACGCAAAGGTGAGGGAAGACTGTTAGGCGTTGAGGCCACGATGCGTTAAAGTCACAAGGCGTGGAGAGCCACCCTGCATCGAAGGTTATCTTGCGACAAACGCATTGAAGGCTGCAGGGCGTTGGAAGTTGAAGGCCACGAGGCGTTGAGAGCCAATTTGCAATGAGGCCACTATGCGGTGAACGCTACCATGCGTCGAAAGTGGGTATGCATTGGACAAAGAAGGTTGGCCAAGAGAGTAATGCGTTTGTTAACCATCTGGCGGGAGAGTTTTGAAAAGTAACACCATCAGAGGCTGTGTGTTGCTGAAGCTAAACATAGAAGGTATGCGTTGAATAGATTGTAGTATAGTGTTGAAATGGAGATTAAGTCGGTGGTATATATATATAAGTGGATCGAGAATTCAATTGTTTTGATTACATTTCAGAGCTCGAGTTGGGTCCATTTCGAAGCTAAACATTGGAGGGAGGTAGAAGGAGATGTTCATGTCAATTTGGAGTGGAAATCTCATCGTAACCGTGGAGGAAACTTGAGCTGGGCAGAGGACTCAGCTGATGTTACTCTCTCAAAGTAACGTTTGGTTTTGGAGGAAGAACGAACTGAAGAAATGGTGGTTAGGGCCAGAACTTCTGAGGTTAGTAAGTTAACTCAATTTTTAGCAAGTTTCATGAAGGGTGCTTGAGCTGAAATTGTATAAATGTGTGTCAAACTTCAGATAGAAGAGATTGGAGCTGAATTTGCCGGATGATTAGGAGCAACTTGGAGTTGTTGAAGGATATGCCCTAAACGGAGAGGATATTCTTCATGAAATTTTGAGGTAAGATGAAGGACTTCCACCTTAATAAGTTTGTAGAAGAAAGTAAGTTCTAAAATTGGCCGAAATGTGATGTTTAGCAGGTTGAAGAAGGAAGAGGAAAGGAAGAAGGAAATTGTTCTGCTGCAGCGGCAGTATCACTGAGAGAGCGAGAGAAAGGGCAACGAAACAAGTATCGCTGTAATGCAAGAGGGGCTTTGCGTCTCACAATTCTCGTTGAAGTATCGCTGGGTGTCGCTCCTCAGGTAGTCTCGCTAGTTACGTTCAACCTAGTGTCGCTGGTGCAGTAA

mRNA sequence

ATGGACAATTTGCATCTCAAAATTTCTAAAAGGACTTTTAAGTGTGGCCTCTCAGCTCAAAACGAAGACAAAAAGTGCAGGCTGGACTCACGAGAGGATGGAGACCGAGAGGCTGGACTCACGAGAGTGGAGAGTGAGACTGAGAGGCAAGAGGAGAGCGAGTGGAGAAGGAGACCGAAAGGCGAGAGGAGAGCGAGTGGAGAGGGAGACCGAGAGGCAACAGGAGAGCGAGACACCAGAGAGACCAAGAGGCGACAGGAGATCAATTGGAGAGGGAGACCGAGAGACGAGAAGAGAGCGAGACGCCAGAGAGACCAAGAGGCGACAGGAGATCGATTGGAGAGGGAGACCGAGAGACGAGAGGAGAGCGAGACGCCGAGGCAATCGATGGAGGTTGAGACGGGAGTGAGCAGTCCAGTGAGAGGTGAAGGAGACCGGGAGCGGCGCGCACACAAGATAAGAAGAGACCAAGAGATGGGTGCTTGGGTAGGAGTAGTTGGCTGGAATGTGATTGGGGGCAGAAAATGGCTAAGTATCAGCTATGCGTTGGTGGCAACACGCCTTGATGGAAGTAGCTTTGGCGTGGACGCAAAGGTGAGGGAAGACTTCACAAGGCGTGGAGAGCCACCCTGCATCGAAGGTTATCTTGCGACAAACGCATTGAAGGCTGCAGGGCGTTGGAAGTTGAAGGCCACGAGGCTTTTGAAAAGTAACACCATCAGAGGCTGTGTGTTGCTGAAGCTAAACATAGAAGCTAAACATTGGAGGGAGGTAGAAGGAGATGTTCATGTCAATTTGGAGTGGAAATCTCATCGTAACCGTGGAGGAAACTTGAGCTGGGCAGAGGACTCAGCTGATGAAGAACGAACTGAAGAAATGGTGGTTAGGGCCAGAACTTCTGAGGAGCAACTTGGAGTTGTTGAAGGATATGCCCTAAACGGAGAGGATATTCTTCATGAAATTTTGAGTTCTAAAATTGGCCGAAATGTGATGTTTAGCAGGTTGAAGAAGGAAGAGGAAAGGAAGAAGGAAATTGTTCTGCTGCAGCGGCAAGGGGCTTTGCGTCTCACAATTCTCGTTGAAGTATCGCTGGGTGTCGCTCCTCAGGTAGTCTCGCTAGTTACGTTCAACCTAGTGTCGCTGGTGCAGTAA

Coding sequence (CDS)

ATGGACAATTTGCATCTCAAAATTTCTAAAAGGACTTTTAAGTGTGGCCTCTCAGCTCAAAACGAAGACAAAAAGTGCAGGCTGGACTCACGAGAGGATGGAGACCGAGAGGCTGGACTCACGAGAGTGGAGAGTGAGACTGAGAGGCAAGAGGAGAGCGAGTGGAGAAGGAGACCGAAAGGCGAGAGGAGAGCGAGTGGAGAGGGAGACCGAGAGGCAACAGGAGAGCGAGACACCAGAGAGACCAAGAGGCGACAGGAGATCAATTGGAGAGGGAGACCGAGAGACGAGAAGAGAGCGAGACGCCAGAGAGACCAAGAGGCGACAGGAGATCGATTGGAGAGGGAGACCGAGAGACGAGAGGAGAGCGAGACGCCGAGGCAATCGATGGAGGTTGAGACGGGAGTGAGCAGTCCAGTGAGAGGTGAAGGAGACCGGGAGCGGCGCGCACACAAGATAAGAAGAGACCAAGAGATGGGTGCTTGGGTAGGAGTAGTTGGCTGGAATGTGATTGGGGGCAGAAAATGGCTAAGTATCAGCTATGCGTTGGTGGCAACACGCCTTGATGGAAGTAGCTTTGGCGTGGACGCAAAGGTGAGGGAAGACTTCACAAGGCGTGGAGAGCCACCCTGCATCGAAGGTTATCTTGCGACAAACGCATTGAAGGCTGCAGGGCGTTGGAAGTTGAAGGCCACGAGGCTTTTGAAAAGTAACACCATCAGAGGCTGTGTGTTGCTGAAGCTAAACATAGAAGCTAAACATTGGAGGGAGGTAGAAGGAGATGTTCATGTCAATTTGGAGTGGAAATCTCATCGTAACCGTGGAGGAAACTTGAGCTGGGCAGAGGACTCAGCTGATGAAGAACGAACTGAAGAAATGGTGGTTAGGGCCAGAACTTCTGAGGAGCAACTTGGAGTTGTTGAAGGATATGCCCTAAACGGAGAGGATATTCTTCATGAAATTTTGAGTTCTAAAATTGGCCGAAATGTGATGTTTAGCAGGTTGAAGAAGGAAGAGGAAAGGAAGAAGGAAATTGTTCTGCTGCAGCGGCAAGGGGCTTTGCGTCTCACAATTCTCGTTGAAGTATCGCTGGGTGTCGCTCCTCAGGTAGTCTCGCTAGTTACGTTCAACCTAGTGTCGCTGGTGCAGTAA

Protein sequence

MDNLHLKISKRTFKCGLSAQNEDKKCRLDSREDGDREAGLTRVESETERQEESEWRRRPKGERRASGEGDREATGERDTRETKRRQEINWRGRPRDEKRARRQRDQEATGDRLERETERREESETPRQSMEVETGVSSPVRGEGDRERRAHKIRRDQEMGAWVGVVGWNVIGGRKWLSISYALVATRLDGSSFGVDAKVREDFTRRGEPPCIEGYLATNALKAAGRWKLKATRLLKSNTIRGCVLLKLNIEAKHWREVEGDVHVNLEWKSHRNRGGNLSWAEDSADEERTEEMVVRARTSEEQLGVVEGYALNGEDILHEILSSKIGRNVMFSRLKKEEERKKEIVLLQRQGALRLTILVEVSLGVAPQVVSLVTFNLVSLVQ
Homology
The following BLAST results are available for this feature:
BLAST of ClCG11G007250.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG11G007250.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG11G007250.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG11G007250.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..152

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG11G007250ClCG11G007250gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8136271..8136348exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8136896..8137194exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8137224..8137298exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8137607..8137761exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8137792..8137884exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8138011..8138064exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8138193..8138296exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8138330..8138374exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8138493..8138557exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8138605..8138688exon
ClCG11G007250.1-exonClCG11G007250.1-exon-CG_Chr11:8138745..8138844exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8136271..8136348CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8136896..8137194CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8137224..8137298CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8137607..8137761CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8137792..8137884CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8138011..8138064CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8138193..8138296CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8138330..8138374CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8138493..8138557CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8138605..8138688CDS
ClCG11G007250.1-cdsClCG11G007250.1-cds-CG_Chr11:8138745..8138844CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG11G007250.1ClCG11G007250.1-proteinpolypeptide