ClCG11G002830.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G002830.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	ENT domain-containing protein
Location	CG_Chr11: 3006266 .. 3008240 (-)
Sequence length	969
RNA-Seq Expression	ClCG11G002830.2
Synteny	ClCG11G002830.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGAAGTGGTCACTATTATACTGTTAGATATGACAAGTTTGAGGGTGGCAGTAATCAAACTGTTGTGGAGAGGGTATCGCGTAAGGCAATTAGGCCTTGTCCACCTTCACAGGAAGTTTTAGAGAATTGGATCCCTGGTGATGTTGTGGAAGTATTTAATGACCGTTCTTGGAAAATAGCTACGGTTTCTGAGGTTTTGGGGAAGAACAACTATGTGGTCAGGTTACTTGGATCTTCTTGTGAATTTAAGGTCAGCAAATTCGACATTCGGGCAAGAAGATCTTGGCAAGATGACAAATGGGTTTTGATGCACAAGGTAGGTCGTACTTTCTCGATCACTTTTCAACTATAACTGTTTTTATTGTTAAAATATCAGATGTTAAGAAGTGTAAAATTTCAGAGGCTAGAATTTATTATATATTATCTTGGTCTTACTTTTCAGCTTGATTTTGCTTGCTTTTCTGCTGATAAACTAATAAGTCCATCAGCTAGTGCTTAAGTTTGTTTTAGAAAAAGCTCTATAACATTTAGTGTAGTGTAGATTCTCTTTTTTAAGGTTTGAGAATGATGTTTAGTTGAGTTTGCTTTCAATTTTAAATTTTAGTAAAATGGAAGCATGTATATCAATGTTGTTTGACCGAGGTTCCAAAATGGCTATAATGAGACTATGAGAGAGATTAAAAGCAATATTTTTTTTGTCTCCTTCATGCGATTTCATCTCACAATTCTTTGTCCCATTGTGTTTTGCGCATACAGAGGTCTGGCAATCATAGTGATGATAGCAAAGAAGATGAGAAAGCAAGCACTAGATTTTATGGTCTAAGCTCCCAAGTTCAGAAATGCCAAAATGTTCCTAATTTAGTAACCTGGAAAAGGGGACTAAACTATGAGTATTCTCAAGCTGAAACAATGGGCAGAGCTGGCTTGAAATGTAGAATGTTGAAGAAAAAGCGAAGGTATCATAGAGTTGTTGCTGGCAATCCATCCACATTGAACGAGCATGTAAAATCACTTGTTATCCAAAAAGGTATGCTGGGGGGAACATCTGGAGGTGCTTTTTTAGATAGAACCAAAATTTGTGAAATGAATGGCGATAGGAAGAAACAAATGGGTGTGGCTTACCATTCTTTTGAAGAGAACTTTGAACTAAATGATCCTGATAGAGCTACATGCTCAGTTGGTAGTTGCAGTATGTCTAACAGTGACGACCATGGGCTACCTTGTCATGTTACTATTGGCCGCAATGAAGATACAGACGGTTCTACAAGTGATGCTGAATCTTTTTGTCATTTGGGATATGGAACAGGCAATTTTCTTCTATCCAGAGACCAGCCATTGGAAGCTGAAGTCCATAGGTTAGAGTTACATGCCTATCGATGCACTATGGAGGCATTATATGCTTCAGGGCCTTTAAGTTGGGAAAAAGAATTATTGCTTACTGATCTACGCCTGTCCCTCCATATATCAAACGACGAGCATTTGATGGAAATAAAAAATTTAGTTTCCACAAGCATTTCAAGTAGATGACAAGTAAAATGCACTTCTCCTCTTCAAGTTTTAAAATTTTTCTGTAGAATGCAATAATGATTCTTGTGAATGGTTCCCTCTAATTGTAAAAAGGAATATGAGAATGATCTTTTTTTCTGTTATTTTATTTTACAATAGCTAGTGGTATAATTTTATAGTGTACAAACAGCTTTATTGAAATTGAATTTATCTTAGCTCCTGAAAGTGTTGTGCTCTTCTTCTTGTTGTCCATGGATTCATATTATTGCGGATGTTTATTTTAATATATGCTCAAGTTCAACAATGTTTTGGGCACAGTTCAAGGAAAACAGTATTGTAACAGCGCTTTGCCAGTTGTTTTGGATAATTCTCGGATGGAATTGTTTTTTCACCTTTTTCATGTGACCTTTTGCAGAATCTATCCTGCCATAGCTTTATCATCATTGTACCACTTGGAACTCTGA

mRNA sequence

ATGTCTGGAAGTGGTCACTATTATACTGTTAGATATGACAAGTTTGAGGGTGGCAGTAATCAAACTGTTGTGGAGAGGGTATCGCGTAAGGCAATTAGGCCTTGTCCACCTTCACAGGAAGTTTTAGAGAATTGGATCCCTGGTGATGTTGTGGAAGTATTTAATGACCGTTCTTGGAAAATAGCTACGGTTTCTGAGGTTTTGGGGAAGAACAACTATGTGGTCAGGTTACTTGGATCTTCTTGTGAATTTAAGGTCAGCAAATTCGACATTCGGGCAAGAAGATCTTGGCAAGATGACAAATGGGTTTTGATGCACAAGAGGTCTGGCAATCATAGTGATGATAGCAAAGAAGATGAGAAAGCAAGCACTAGATTTTATGGTCTAAGCTCCCAAGTTCAGAAATGCCAAAATGTTCCTAATTTAGTAACCTGGAAAAGGGGACTAAACTATGAGTATTCTCAAGCTGAAACAATGGGCAGAGCTGGCTTGAAATGTAGAATGTTGAAGAAAAAGCGAAGGTATCATAGAGTTGTTGCTGGCAATCCATCCACATTGAACGAGCATGTAAAATCACTTGTTATCCAAAAAGGTATGCTGGGGGGAACATCTGGAGGTGCTTTTTTAGATAGAACCAAAATTTGTGAAATGAATGGCGATAGGAAGAAACAAATGGGTGTGGCTTACCATTCTTTTGAAGAGAACTTTGAACTAAATGATCCTGATAGAGCTACATGCTCAGTTGGTAGTTGCAGTATGTCTAACAGTGACGACCATGGGCTACCTTGTCATGTTACTATTGGCCGCAATGAAGATACAGACGGTTCTACAAGTGATGCTGAATCTTTTTGTCATTTGGGATATGGAACAGGCAATTTTCTTCTATCCAGAGACCAGCCATTGGAAGCTGAAGTCCATAGAATCTATCCTGCCATAGCTTTATCATCATTGTACCACTTGGAACTCTGA

Coding sequence (CDS)

ATGTCTGGAAGTGGTCACTATTATACTGTTAGATATGACAAGTTTGAGGGTGGCAGTAATCAAACTGTTGTGGAGAGGGTATCGCGTAAGGCAATTAGGCCTTGTCCACCTTCACAGGAAGTTTTAGAGAATTGGATCCCTGGTGATGTTGTGGAAGTATTTAATGACCGTTCTTGGAAAATAGCTACGGTTTCTGAGGTTTTGGGGAAGAACAACTATGTGGTCAGGTTACTTGGATCTTCTTGTGAATTTAAGGTCAGCAAATTCGACATTCGGGCAAGAAGATCTTGGCAAGATGACAAATGGGTTTTGATGCACAAGAGGTCTGGCAATCATAGTGATGATAGCAAAGAAGATGAGAAAGCAAGCACTAGATTTTATGGTCTAAGCTCCCAAGTTCAGAAATGCCAAAATGTTCCTAATTTAGTAACCTGGAAAAGGGGACTAAACTATGAGTATTCTCAAGCTGAAACAATGGGCAGAGCTGGCTTGAAATGTAGAATGTTGAAGAAAAAGCGAAGGTATCATAGAGTTGTTGCTGGCAATCCATCCACATTGAACGAGCATGTAAAATCACTTGTTATCCAAAAAGGTATGCTGGGGGGAACATCTGGAGGTGCTTTTTTAGATAGAACCAAAATTTGTGAAATGAATGGCGATAGGAAGAAACAAATGGGTGTGGCTTACCATTCTTTTGAAGAGAACTTTGAACTAAATGATCCTGATAGAGCTACATGCTCAGTTGGTAGTTGCAGTATGTCTAACAGTGACGACCATGGGCTACCTTGTCATGTTACTATTGGCCGCAATGAAGATACAGACGGTTCTACAAGTGATGCTGAATCTTTTTGTCATTTGGGATATGGAACAGGCAATTTTCTTCTATCCAGAGACCAGCCATTGGAAGCTGAAGTCCATAGAATCTATCCTGCCATAGCTTTATCATCATTGTACCACTTGGAACTCTGA

Protein sequence

MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWKIATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDEKASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVAGNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELNDPDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQPLEAEVHRIYPAIALSSLYHLEL

Homology

[Close]

BLAST of ClCG11G002830.2 vs. NCBI nr
Match: XP_038891206.1 (uncharacterized protein LOC120080569 isoform X2 [Benincasa hispida])

HSP 1 Score: 630.2 bits (1624), Expect = 1.0e-176
Identity = 304/322 (94.41%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRS QDDKWVLMHKRSGNH DDSKEDE
Sbjct: 88  MATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSCQDDKWVLMHKRSGNHGDDSKEDE 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
           KASTRFYGLSSQVQKCQNVPNLVTWKRG NYEYSQAETMGR GLKCRM KKKRRYH VVA
Sbjct: 148 KASTRFYGLSSQVQKCQNVPNLVTWKRGPNYEYSQAETMGRDGLKCRMSKKKRRYHSVVA 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
           GNPS L+EHVKSLVIQ+GMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENF+LN+
Sbjct: 208 GNPSMLHEHVKSLVIQRGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFKLNN 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCSM++SDD GLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRD+P
Sbjct: 268 ADRATCSVGSCSMTDSDDRGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDKP 327

Query: 301 LEAEVHRIYPAIALSSLYHLEL 323
           LEAEVHRIYPA+ALSSLYHLEL
Sbjct: 328 LEAEVHRIYPAVALSSLYHLEL 349

[Close]

BLAST of ClCG11G002830.2 vs. NCBI nr
Match: XP_038891200.1 (uncharacterized protein LOC120080569 isoform X1 [Benincasa hispida] >XP_038891202.1 uncharacterized protein LOC120080569 isoform X1 [Benincasa hispida] >XP_038891203.1 uncharacterized protein LOC120080569 isoform X1 [Benincasa hispida] >XP_038891204.1 uncharacterized protein LOC120080569 isoform X1 [Benincasa hispida] >XP_038891205.1 uncharacterized protein LOC120080569 isoform X1 [Benincasa hispida])

HSP 1 Score: 602.8 bits (1553), Expect = 1.7e-168
Identity = 290/308 (94.16%), Postives = 299/308 (97.08%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRS QDDKWVLMHKRSGNH DDSKEDE
Sbjct: 88  MATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSCQDDKWVLMHKRSGNHGDDSKEDE 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
           KASTRFYGLSSQVQKCQNVPNLVTWKRG NYEYSQAETMGR GLKCRM KKKRRYH VVA
Sbjct: 148 KASTRFYGLSSQVQKCQNVPNLVTWKRGPNYEYSQAETMGRDGLKCRMSKKKRRYHSVVA 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
           GNPS L+EHVKSLVIQ+GMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENF+LN+
Sbjct: 208 GNPSMLHEHVKSLVIQRGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFKLNN 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCSM++SDD GLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRD+P
Sbjct: 268 ADRATCSVGSCSMTDSDDRGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDKP 327

Query: 301 LEAEVHRI 309
           LEAEVHR+
Sbjct: 328 LEAEVHRL 335

[Close]

BLAST of ClCG11G002830.2 vs. NCBI nr
Match: KAE8651525.1 (hypothetical protein Csa_019298 [Cucumis sativus])

HSP 1 Score: 582.8 bits (1501), Expect = 1.8e-162
Identity = 281/322 (87.27%), Postives = 295/322 (91.61%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFE GSNQTVVERVSRKAIRPCPPSQE+LENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEDGSNQTVVERVSRKAIRPCPPSQEILENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRS QDD+WVLMHK SGNH DDSKEDE
Sbjct: 88  MATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSSQDDRWVLMHKMSGNHGDDSKEDE 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
           KAS +FY LSSQVQKCQNVPNL+TWKR  N +YSQAETMGRAGLKCR+LKKKRR H  V 
Sbjct: 148 KASVKFYDLSSQVQKCQNVPNLITWKRRSNNDYSQAETMGRAGLKCRILKKKRRSHEAVG 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
           GNPS L+EHVKSLVIQ+G LGGTSGG F DRTKICE+NGDRKKQM V YHSF+EN ELND
Sbjct: 208 GNPSMLHEHVKSLVIQRGKLGGTSGGVFSDRTKICEVNGDRKKQMDVGYHSFDENVELND 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCSMSNSDD GLPCHVTIGRNEDTDGSTSDAESFC  GYG  +FLLSRD+P
Sbjct: 268 ADRATCSVGSCSMSNSDDRGLPCHVTIGRNEDTDGSTSDAESFCPSGYGIDDFLLSRDKP 327

Query: 301 LEAEVHRIYPAIALSSLYHLEL 323
           LEAEVHR+YP IALSSLYHLEL
Sbjct: 328 LEAEVHRVYPVIALSSLYHLEL 349

[Close]

BLAST of ClCG11G002830.2 vs. NCBI nr
Match: TYJ97795.1 (RNA binding protein, putative isoform 4 [Cucumis melo var. makuwa])

HSP 1 Score: 566.6 bits (1459), Expect = 1.4e-157
Identity = 273/308 (88.64%), Postives = 286/308 (92.86%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFE GSNQTVVERVSRKAIRPCPPSQE+LENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEDGSNQTVVERVSRKAIRPCPPSQEILENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRS QDD+WVLMHK SGNH DDSKEDE
Sbjct: 88  MATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSSQDDRWVLMHKMSGNHGDDSKEDE 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
           KASTRFYGLSSQVQKCQNVPNL+TWKRG N +YSQAETMGRAGLKCR+LKKKRR H VV 
Sbjct: 148 KASTRFYGLSSQVQKCQNVPNLITWKRGPNNDYSQAETMGRAGLKCRILKKKRRSHEVVG 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
           GNPS L+EHVKSLVIQ+GMLGGTSGG F D TKICE+NGD KKQMGV YHSFEEN ELND
Sbjct: 208 GNPSMLHEHVKSLVIQRGMLGGTSGGVFSDGTKICEVNGDMKKQMGVGYHSFEENVELND 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCSMSNSDD GLPCHVTIGRNEDTDGSTSDAESFC  GYG  +FLLSR++P
Sbjct: 268 ADRATCSVGSCSMSNSDDRGLPCHVTIGRNEDTDGSTSDAESFCPSGYGIDDFLLSREKP 327

Query: 301 LEAEVHRI 309
           LEAEVHR+
Sbjct: 328 LEAEVHRL 335

[Close]

BLAST of ClCG11G002830.2 vs. NCBI nr
Match: KAA0061586.1 (RNA binding protein, putative isoform 4 [Cucumis melo var. makuwa])

HSP 1 Score: 566.6 bits (1459), Expect = 1.4e-157
Identity = 273/308 (88.64%), Postives = 286/308 (92.86%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFE GSNQTVVERVSRKAIRPCPPSQE+LENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEDGSNQTVVERVSRKAIRPCPPSQEILENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRS QDD+WVLMHK SGNH DDSKEDE
Sbjct: 88  MATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSSQDDRWVLMHKMSGNHGDDSKEDE 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
           KASTRFYGLSSQVQKCQNVPNL+TWKRG N +YSQAETMGRAGLKCR+LKKKRR H VV 
Sbjct: 148 KASTRFYGLSSQVQKCQNVPNLITWKRGPNNDYSQAETMGRAGLKCRILKKKRRSHEVVG 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
           GNPS L+EHVKSLVIQ+GMLGGTSGG F D TKICE+NGD KKQMGV YHSFEEN ELND
Sbjct: 208 GNPSMLHEHVKSLVIQRGMLGGTSGGVFSDGTKICEVNGDMKKQMGVGYHSFEENVELND 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCSMSNSDD GLPCHVTIGRNEDTDGSTSDAESFC  GYG  +FLLSR++P
Sbjct: 268 ADRATCSVGSCSMSNSDDRGLPCHVTIGRNEDTDGSTSDAESFCPSGYGIDDFLLSREKP 327

Query: 301 LEAEVHRI 309
           LEAEVHR+
Sbjct: 328 LEAEVHRL 335

[Close]

BLAST of ClCG11G002830.2 vs. ExPASy TrEMBL
Match: A0A5D3BH42 (RNA binding protein, putative isoform 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00050 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 6.6e-158
Identity = 273/308 (88.64%), Postives = 286/308 (92.86%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFE GSNQTVVERVSRKAIRPCPPSQE+LENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEDGSNQTVVERVSRKAIRPCPPSQEILENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRS QDD+WVLMHK SGNH DDSKEDE
Sbjct: 88  MATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSSQDDRWVLMHKMSGNHGDDSKEDE 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
           KASTRFYGLSSQVQKCQNVPNL+TWKRG N +YSQAETMGRAGLKCR+LKKKRR H VV 
Sbjct: 148 KASTRFYGLSSQVQKCQNVPNLITWKRGPNNDYSQAETMGRAGLKCRILKKKRRSHEVVG 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
           GNPS L+EHVKSLVIQ+GMLGGTSGG F D TKICE+NGD KKQMGV YHSFEEN ELND
Sbjct: 208 GNPSMLHEHVKSLVIQRGMLGGTSGGVFSDGTKICEVNGDMKKQMGVGYHSFEENVELND 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCSMSNSDD GLPCHVTIGRNEDTDGSTSDAESFC  GYG  +FLLSR++P
Sbjct: 268 ADRATCSVGSCSMSNSDDRGLPCHVTIGRNEDTDGSTSDAESFCPSGYGIDDFLLSREKP 327

Query: 301 LEAEVHRI 309
           LEAEVHR+
Sbjct: 328 LEAEVHRL 335

[Close]

BLAST of ClCG11G002830.2 vs. ExPASy TrEMBL
Match: A0A5A7V522 (RNA binding protein, putative isoform 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001510 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 6.6e-158
Identity = 273/308 (88.64%), Postives = 286/308 (92.86%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFE GSNQTVVERVSRKAIRPCPPSQE+LENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEDGSNQTVVERVSRKAIRPCPPSQEILENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRS QDD+WVLMHK SGNH DDSKEDE
Sbjct: 88  MATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSSQDDRWVLMHKMSGNHGDDSKEDE 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
           KASTRFYGLSSQVQKCQNVPNL+TWKRG N +YSQAETMGRAGLKCR+LKKKRR H VV 
Sbjct: 148 KASTRFYGLSSQVQKCQNVPNLITWKRGPNNDYSQAETMGRAGLKCRILKKKRRSHEVVG 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
           GNPS L+EHVKSLVIQ+GMLGGTSGG F D TKICE+NGD KKQMGV YHSFEEN ELND
Sbjct: 208 GNPSMLHEHVKSLVIQRGMLGGTSGGVFSDGTKICEVNGDMKKQMGVGYHSFEENVELND 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCSMSNSDD GLPCHVTIGRNEDTDGSTSDAESFC  GYG  +FLLSR++P
Sbjct: 268 ADRATCSVGSCSMSNSDDRGLPCHVTIGRNEDTDGSTSDAESFCPSGYGIDDFLLSREKP 327

Query: 301 LEAEVHRI 309
           LEAEVHR+
Sbjct: 328 LEAEVHRL 335

[Close]

BLAST of ClCG11G002830.2 vs. ExPASy TrEMBL
Match: A0A6J1FH95 (uncharacterized protein LOC111444134 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444134 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 6.6e-158
Identity = 281/323 (87.00%), Postives = 294/323 (91.02%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPS EVLENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSLEVLENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNY+VRLLGSS EFKV KFDIRARRSWQDDKWVLMHKRSGN  DDSKED 
Sbjct: 88  MATVSEVLGKNNYLVRLLGSSSEFKVCKFDIRARRSWQDDKWVLMHKRSGNRGDDSKEDA 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
            AS RFYGLSSQ+QK QNVPNL TW+RG NYE SQAETMGRAGLKCR LKKK+RYH+VVA
Sbjct: 148 NASPRFYGLSSQIQKFQNVPNLDTWRRGSNYECSQAETMGRAGLKCRTLKKKQRYHKVVA 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
            NPSTL+EHVKSLVIQ+GMLGG  GGA LDRT I EMN DRKKQMGVAYHSF ENFELND
Sbjct: 208 RNPSTLHEHVKSLVIQRGMLGGNIGGA-LDRTIISEMNCDRKKQMGVAYHSFAENFELND 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCS+SNSD HGL C V+IG NEDTDGSTSDAESFCHLGY T NFLLSRD+P
Sbjct: 268 ADRATCSVGSCSVSNSDHHGLRCRVSIGHNEDTDGSTSDAESFCHLGYRTDNFLLSRDEP 327

Query: 301 LEAEVHRIYPAIAL-SSLYHLEL 323
           LEAE+HR+YPAIAL SSLYHLEL
Sbjct: 328 LEAEIHRVYPAIALSSSLYHLEL 349

[Close]

BLAST of ClCG11G002830.2 vs. ExPASy TrEMBL
Match: A0A1S3C6M8 (uncharacterized protein LOC103497445 OS=Cucumis melo OX=3656 GN=LOC103497445 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.5e-157
Identity = 272/308 (88.31%), Postives = 285/308 (92.53%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFE GSNQTVVERVSRKAIRPCPPSQE+LENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEDGSNQTVVERVSRKAIRPCPPSQEILENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRS QDD+WVLMHK SGNH DDSKEDE
Sbjct: 88  MATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSSQDDRWVLMHKMSGNHGDDSKEDE 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
           KASTRFYGLSSQVQKCQNVPNL+TWKRG N +YSQAETMGRAGLKCR+LKKKRR H VV 
Sbjct: 148 KASTRFYGLSSQVQKCQNVPNLITWKRGPNNDYSQAETMGRAGLKCRILKKKRRSHEVVG 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
           GNPS L+EHVKSLVIQ+GMLGGTSGG F D  KICE+NGD KKQMGV YHSFEEN ELND
Sbjct: 208 GNPSMLHEHVKSLVIQRGMLGGTSGGVFSDGAKICEVNGDMKKQMGVGYHSFEENVELND 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCSMSNSDD GLPCHVTIGRNEDTDGSTSDAESFC  GYG  +FLLSR++P
Sbjct: 268 ADRATCSVGSCSMSNSDDRGLPCHVTIGRNEDTDGSTSDAESFCPSGYGIDDFLLSREKP 327

Query: 301 LEAEVHRI 309
           LEAEVHR+
Sbjct: 328 LEAEVHRL 335

[Close]

BLAST of ClCG11G002830.2 vs. ExPASy TrEMBL
Match: A0A0A0LFX8 (ENT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006040 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.2e-155
Identity = 268/308 (87.01%), Postives = 282/308 (91.56%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           MSGSGHYYTVRYDKFE GSNQTVVERVSRKAIRPCPPSQE+LENWIPGDVVEVFNDRSWK
Sbjct: 28  MSGSGHYYTVRYDKFEDGSNQTVVERVSRKAIRPCPPSQEILENWIPGDVVEVFNDRSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +ATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRS QDD+WVLMHK SGNH DDSKEDE
Sbjct: 88  MATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSSQDDRWVLMHKMSGNHGDDSKEDE 147

Query: 121 KASTRFYGLSSQVQKCQNVPNLVTWKRGLNYEYSQAETMGRAGLKCRMLKKKRRYHRVVA 180
           KAS +FY LSSQVQKCQNVPNL+TWKR  N +YSQAETMGRAGLKCR+LKKKRR H  V 
Sbjct: 148 KASVKFYDLSSQVQKCQNVPNLITWKRRSNNDYSQAETMGRAGLKCRILKKKRRSHEAVG 207

Query: 181 GNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFELND 240
           GNPS L+EHVKSLVIQ+G LGGTSGG F DRTKICE+NGDRKKQM V YHSF+EN ELND
Sbjct: 208 GNPSMLHEHVKSLVIQRGKLGGTSGGVFSDRTKICEVNGDRKKQMDVGYHSFDENVELND 267

Query: 241 PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLGYGTGNFLLSRDQP 300
            DRATCSVGSCSMSNSDD GLPCHVTIGRNEDTDGSTSDAESFC  GYG  +FLLSRD+P
Sbjct: 268 ADRATCSVGSCSMSNSDDRGLPCHVTIGRNEDTDGSTSDAESFCPSGYGIDDFLLSRDKP 327

Query: 301 LEAEVHRI 309
           LEAEVHR+
Sbjct: 328 LEAEVHRL 335

[Close]

BLAST of ClCG11G002830.2 vs. TAIR 10
Match: AT4G32440.1 (Plant Tudor-like RNA-binding protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-32
Identity = 99/290 (34.14%), Postives = 147/290 (50.69%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           +SG+GH Y VR+  F+    + V+E+V RK IRPCPP  +V E W  G++VEV ++ SWK
Sbjct: 28  VSGNGHTYNVRFYSFQIEHEEAVMEKVPRKIIRPCPPLVDV-ERWDTGELVEVLDNFSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
            ATV E L  + YVVRLLG+  E    K ++RAR+SWQD++WV + K SG+    +    
Sbjct: 88  AATVREELSGHYYVVRLLGTPEELTFHKVNLRARKSWQDERWVAIGKISGSLKSSTLTGS 147

Query: 121 KASTRFYGLSSQVQKCQ-NVPNLVTWKRGLNYEYSQ-AETMGRAGLKCRMLKKKRRYHRV 180
               +     + +   + +V +    KR   Y +S+ AE+      K R L+K+ +  +V
Sbjct: 148 DVHQKLQPHRNSMPLHEPSVVSARLLKRPSPYNWSECAESCTGNPKKMRSLEKEGQQQKV 207

Query: 181 VAGNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFEL 240
            A +    N   KS V                +T  C++   R K        F E+   
Sbjct: 208 DAISCRPENRGGKSHV---------QASLNNHKTGYCQIVRVRSK-------GFSESVRA 267

Query: 241 ND-PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLG 288
           +D  D   CSVGSCS ++ D+  +P  +  G  +  D  +SDAES C LG
Sbjct: 268 DDCSDSDVCSVGSCSATSYDESNMPPCMLDGSTQQADSCSSDAESSCGLG 300

[Close]

BLAST of ClCG11G002830.2 vs. TAIR 10
Match: AT4G32440.2 (Plant Tudor-like RNA-binding protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-32
Identity = 99/290 (34.14%), Postives = 147/290 (50.69%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           +SG+GH Y VR+  F+    + V+E+V RK IRPCPP  +V E W  G++VEV ++ SWK
Sbjct: 28  VSGNGHTYNVRFYSFQIEHEEAVMEKVPRKIIRPCPPLVDV-ERWDTGELVEVLDNFSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
            ATV E L  + YVVRLLG+  E    K ++RAR+SWQD++WV + K SG+    +    
Sbjct: 88  AATVREELSGHYYVVRLLGTPEELTFHKVNLRARKSWQDERWVAIGKISGSLKSSTLTGS 147

Query: 121 KASTRFYGLSSQVQKCQ-NVPNLVTWKRGLNYEYSQ-AETMGRAGLKCRMLKKKRRYHRV 180
               +     + +   + +V +    KR   Y +S+ AE+      K R L+K+ +  +V
Sbjct: 148 DVHQKLQPHRNSMPLHEPSVVSARLLKRPSPYNWSECAESCTGNPKKMRSLEKEGQQQKV 207

Query: 181 VAGNPSTLNEHVKSLVIQKGMLGGTSGGAFLDRTKICEMNGDRKKQMGVAYHSFEENFEL 240
            A +    N   KS V                +T  C++   R K        F E+   
Sbjct: 208 DAISCRPENRGGKSHV---------QASLNNHKTGYCQIVRVRSK-------GFSESVRA 267

Query: 241 ND-PDRATCSVGSCSMSNSDDHGLPCHVTIGRNEDTDGSTSDAESFCHLG 288
           +D  D   CSVGSCS ++ D+  +P  +  G  +  D  +SDAES C LG
Sbjct: 268 DDCSDSDVCSVGSCSATSYDESNMPPCMLDGSTQQADSCSSDAESSCGLG 300

[Close]

BLAST of ClCG11G002830.2 vs. TAIR 10
Match: AT5G20030.1 (Plant Tudor-like RNA-binding protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-28
Identity = 60/120 (50.00%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           +SG+GHYYTV YD  +G       ERV RK++RP PP  +VL+ W PGD++EVF   SWK
Sbjct: 28  ISGNGHYYTVMYDHNDG------TERVPRKSMRPEPPRLQVLDAWCPGDILEVFQSCSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGNHSDDSKEDE 120
           +A VS+VLG   ++VRLLGSS +FKV+K DIR R+SWQD++W+++ + +   S  +   E
Sbjct: 88  MAIVSKVLGNGCFLVRLLGSSLKFKVTKSDIRVRQSWQDNEWIMIGQGTSRLSAQTSTGE 141

[Close]

BLAST of ClCG11G002830.2 vs. TAIR 10
Match: AT2G25590.1 (Plant Tudor-like protein )

HSP 1 Score: 115.9 bits (289), Expect = 5.9e-26
Identity = 58/110 (52.73%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVF-NDRSW 60
           +SG+GH Y VRY  FE  +N+ V +RV RK IRPCPP  +V + W  G++VEV  N+ SW
Sbjct: 28  ISGNGHTYNVRYYSFEIANNEVVEDRVPRKIIRPCPPQVDV-DRWEAGELVEVLDNNISW 87

Query: 61  KIATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRS 110
           K ATV EVL    YVVRLLG+  E  V K  +RAR+SWQD++WV++ K +
Sbjct: 88  KTATVLEVLSGRYYVVRLLGAKAELTVHKVYLRARQSWQDERWVMIGKET 136

[Close]

BLAST of ClCG11G002830.2 vs. TAIR 10
Match: AT4G32440.3 (Plant Tudor-like RNA-binding protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-24
Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 1   MSGSGHYYTVRYDKFEGGSNQTVVERVSRKAIRPCPPSQEVLENWIPGDVVEVFNDRSWK 60
           +SG+GH Y VR+  F+    + V+E+V RK IRPCPP  +V E W  G++VEV ++ SWK
Sbjct: 28  VSGNGHTYNVRFYSFQIEHEEAVMEKVPRKIIRPCPPLVDV-ERWDTGELVEVLDNFSWK 87

Query: 61  IATVSEVLGKNNYVVRLLGSSCEFKVSKFDIRARRSWQDDKWVLMHKRSGN 112
            ATV E L  + YVVRLLG+  E    K ++RAR+SWQD++WV + K SG+
Sbjct: 88  AATVREELSGHYYVVRLLGTPEELTFHKVNLRARKSWQDERWVAIGKISGS 137

The following BLAST results are available for this feature:

BLAST of ClCG11G002830.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891206.1	1.0e-176	94.41	uncharacterized protein LOC120080569 isoform X2 [Benincasa hispida]	[more]
XP_038891200.1	1.7e-168	94.16	uncharacterized protein LOC120080569 isoform X1 [Benincasa hispida] >XP_03889120...	[more]
KAE8651525.1	1.8e-162	87.27	hypothetical protein Csa_019298 [Cucumis sativus]	[more]
TYJ97795.1	1.4e-157	88.64	RNA binding protein, putative isoform 4 [Cucumis melo var. makuwa]	[more]
KAA0061586.1	1.4e-157	88.64	RNA binding protein, putative isoform 4 [Cucumis melo var. makuwa]	[more]

BLAST of ClCG11G002830.2 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG11G002830.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BH42	6.6e-158	88.64	RNA binding protein, putative isoform 4 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7V522	6.6e-158	88.64	RNA binding protein, putative isoform 4 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1FH95	6.6e-158	87.00	uncharacterized protein LOC111444134 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3C6M8	2.5e-157	88.31	uncharacterized protein LOC103497445 OS=Cucumis melo OX=3656 GN=LOC103497445 PE=...	[more]
A0A0A0LFX8	5.2e-155	87.01	ENT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006040 PE=4 SV...	[more]

BLAST of ClCG11G002830.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32440.1	1.4e-32	34.14	Plant Tudor-like RNA-binding protein	[more]
AT4G32440.2	1.4e-32	34.14	Plant Tudor-like RNA-binding protein	[more]
AT5G20030.1	1.7e-28	50.00	Plant Tudor-like RNA-binding protein	[more]
AT2G25590.1	5.9e-26	52.73	Plant Tudor-like protein	[more]
AT4G32440.3	1.5e-24	49.55	Plant Tudor-like RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014002	Agenet domain, plant type	SMART	SM00743	agenet_At_2	coord: 43..99 e-value: 3.6E-10 score: 49.8
IPR008395	Agenet-like domain	PFAM	PF05641	Agenet	coord: 4..37 e-value: 3.6E-4 score: 21.0
None	No IPR available	PANTHER	PTHR31917:SF39	PLANT TUDOR-LIKE RNA-BINDING PROTEIN	coord: 1..233
None	No IPR available	PANTHER	PTHR31917	AGENET DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..233

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG11G002830	ClCG11G002830	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG11G002830.2-exon	ClCG11G002830.2-exon-CG_Chr11:3006266..3006314	exon
ClCG11G002830.2-exon	ClCG11G002830.2-exon-CG_Chr11:3006881..3007479	exon
ClCG11G002830.2-exon	ClCG11G002830.2-exon-CG_Chr11:3007920..3008240	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG11G002830.2-cds	ClCG11G002830.2-cds-CG_Chr11:3006266..3006314	CDS
ClCG11G002830.2-cds	ClCG11G002830.2-cds-CG_Chr11:3006881..3007479	CDS
ClCG11G002830.2-cds	ClCG11G002830.2-cds-CG_Chr11:3007920..3008240	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG11G002830.2	ClCG11G002830.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus