ClCG10G018890.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G018890.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	F-box protein CPR30-like
Location	CG_Chr10: 33876407 .. 33881783 (+)
Sequence length	1533
RNA-Seq Expression	ClCG10G018890.2
Synteny	ClCG10G018890.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGTCTTGATGTGTTGATTGAGATTCTATCGAGGCTTTCGCCGGAACCTCTACTCCGATTCAAGTCTGTGAGTAAATTCTGGTACGCTCTAATCGATGACCCTAAATTTGTAGCAAAGCATTTATCAATTTCTCTTCAACAAAAACACCTTCATGTCAAGCGTATTGTGACGAACAACTCTGGGGAAAAGGAATTTGTATCCTCCATCCTTAAATTTCCCCTTGATCAATCTATGTCTGTTCTCGATGTCCATTTTCCATTCCATGATGACTACAAGTATTTACACTTTTTTGGCCATTCTCATGGTTTAATCTGTATCTGTGGGCGATATGATCTTTTTCTCTGTAATCTTGCTACTAGACAGTTTCGTAAACTCCCACCCTCAATTATTCTCCTCGATGAAATTCAGAATAAGCCTAAGGGCGACTGTTCAAGTAGGTATTTAATTTCGAGTATCACGGGATTTGGGTATGATGCGAGATCTAGGGATTTCAAGGTGGTTACAGTCATGCATTTTTCAGATGAAGTTTCAAGTATCAGTCCTCTAAGAGTGGAAATTTACGATATGAGCAAAGATAGATGGAGAGAAATTGAACCACTTATTTGTTGTAGTGTATTTTCGATGCCTTTATTTAACACGTTTCATGAAGGAAAATTTTACTGGTTGGGGACAGGCGTAACATTTGCTCCTTTGTATGAAATGATACTAACATTTGACATTAGCGAAGAGGTTTTTTGCCAAATTGTGTTACCAGAGAGTTTAAATCAGAAAGCGCATGATAGAAGTTTAGGGATTTTGAATGGATCTGTTGTTCTATTTAATTATCCATCTCGTGGTATGAATGAAAAAAGCTTCGACATTTAGGAGATGGAGAAGGATAAGTCTGGCACTATTTCGTGGTCGAAGCTATTTACAATTGGCCCTAATTTTGGAATTATGTTTCCAATGTTGTTCGTGAGCTCCGATGAACTTTTAATAGAGTGTAAAGAAGGACTAATGATTTTGTACAACATTAAAACTCAACAATTCATAAAGCTCTCAATAAAAGGTCATCCAGGATTAATAAGGAATGAAACTAGGTACGAAGCTAGTTTATTTGTTAAGAGTTTGTTGTCTGTAGAAGGAGGAAATAATATGAGGTATGAATTTTAGCATTCTCAATTTATTTAAGTTAGTTAAGTGCCAAAGCGAGCCTGGCTAGGTCGCTAGGCAGTAATTAGCATAACCTCTTATCCTAGAGGTGGAAGGTTTGAATCCCCCAATTATTATACTAAAAAAGGGTGTTAAGTCAAGATTATCAAACCTTCTACATATGTTTTGAAGTGATGATTTAGCTGTTACACAAAATTGTGTACTTCCTTTCCCATCATATAATAAAAATAAAAATAGTTACCCACAAAATATATATATATATATATATAATATTTGTTATTAATGTATTCCTCTAAAGAGTTAGATCCGTGCACATTTTAAAATCATTTTGCTTGAAAAAAAATTAAATAAATAAAAATCATTTTTAAATTGGATATCGAGAAAACAACGAAAATAATAGAACAACCTTTAAGAAAACTATATGAATATAGAAAAATGTTATTAGTTGAGTGGTAATTTACATGTTGTCTCATCCTCGAGGTCAATATCTATACATCAAAATAAAAAATCTAGTGTTGAACATATATGGGTTGTTCACCACAATAGCATTCTTGACAAAACTATATGATTTTTTTTTTTTTTTTTTGGTCAAAAAGTCGTAGCTTGTGTCTTTCTAGTACAATTGGCGGTAGGAGAATTCAAATCACACATTTATTTTTTTTTATTTTTTATTTTTTTGCTTCAAATCAATTTAGTTTGTAAATTAGATACTTTTTTAATATGACAATCTAAAATTAAATATTATTTATTCAACTAACATTGCTTTAGCAATTAATTCAAAATCAACTCAATTAAATAAAAAATATATATATTTTTTTTAAAATTTTGAAATGTAGATTTGATTAATATTAAATGGGTTGTTTTCAAATGTAGCAAAATATCATTGTCTATCATAGACAGCGATAGACACTGATATATTTACAAAAATAGCAAAATGTCAAATATTGGAAAAATATATTTAAAAAAAATTACCTTTTTTATTTTTTATTTTAAATGACAAAATTGCTAAAAATATTTAGAAATAAAAGCAAAATATTACAATTTATCTACAAAACATAAATAGTAGTCTATCGTGGTCTATCACAGATAGACGGTAAAATTTTGTTATATTTATAAATATTTTAGTTTATTTTTTTATATTTAAAAACAACTTATTATTTAATAATGTACTAAAACTCCTTGTTTGTATATTTGGACATTCATATGTGAGATTGAAAGATGAATTAACATAACATGGCACGATGAATTTTCACTACCTCAAAAACCAGACTTACATTACATAAGTGTTGACCAAATTTTACTAATTCGCAAAACCAAACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTCTTTCTTTTGGGCATCGTTTTTGTTTTTCATTTTTATTGGGATCATTTTGGGCATAGTCAAGTTTGGAAAAGGTACGAAATTGACGATTAAATAATTTAGCCAATATTCAAAGATTATAATATTAAAAAAATTTAAGAAAAAACGTATATGAAAATTTGAAAGTAATCCTGTTCGTTGATTGCTAGTGTGAGCACGCATACACCGTCTGATGAAGAAGATGATCTCTCTATAAATACCTCTCTTCTCATTCCGTATCGAGCCGAAACTTCAATTTTGCCGCTTTCAAAATCCCGCGTTTATTTCCCTCTCTGGCTCTCGTTGTTCGATCGATTCGACTGCCATTTCCGGCGAATTCTCCGATTGCTTTATCAGGTACTGTAGTTCTTCAGTTCTCTTTCGATTCTCCGTTCGATTGTTTTGAAATTTTCTTCCCCTTGTTTGGTCCAGTTTATTAGATTGAAGTGCAAGATGAAAATCTTCCGACTCTTTCCTTGTCTCGTCCTGTTTGTAACCAATGGTATATTATTTGTTTGTTTCGCGTCAAATTATGTCTAGACGTTTTCTAGCTTGGTCGGATTCGATTTTCTGATCATGGCCTGGGTTCCTGATTTGGTCCTTTTTGTGGAAGTAGAGAGTTAGAAGTTAGAACCCAATAGAAAGTGGAGAAATTTTCAACATTGCCGAAGCTGAAATAAGGGCTAACCCACAGTTATCATTATGCGTATTTTTATTGTTATAGTTAATTTTCCTTTCAAACACATGGGTTGCCCTAGTCTGAAAGAGCTTTGAGAGAATGGAGCCACCTACCTAGAATAGATGAGTGCATACAAAGTGGCAGAACACTGGTCCGTCAAAATTTCTTGGACTGATATCTGATAAACATTTTTGATATGTAGCAAATGGTTTTGGGTACAAATGTCAGAAGTAATTGTTTGGATCTCCCCACATTGGATTTTTGTAATGAGGAAGAAAAGTACTTGTGAAATGCTGTCTGCTAGTTATATAAACGCCACCGCAGATTTTTTTAATTGATTTGGTGTTCATGCCAAACAATTTCAAGCATTGCTAAGAATGGTGGAACAAGTTAGTTTTCCTTTTACTAGATGTTTGTCCTCTCTGAGAGATGTTCTTGTTCTTGGTGTTTTATAGATGGATACATCAAACCCTTCAGTTTTTGTCAATGCTGAGCTTTTGCGACTGTATATTGGAAGAAGAGTTCGGGCAGTGATTCAGGTACAGTCTGAAGGCAACGGAATCGTATTTGGTAAATCGACAGACGACAACCAGATCACTGTGAAAGGTTCCCCACCCTTTCCTCTTTCGAAGTTTGTCGAGGTCATTGGAGTTGCTGATACCGACAAATCCATACAAGCTGATGTATGGACAAATTTTGGTGATTCATTTGGTATGCTCTCTTCTTCAGCTATCCTTATTATAGAATGTCTTGAAGCATATGAAATCAATTAATGTTTGGATTAGCTGAAGAGGATCATGAATTGTGTTTTTAGCTAATCATTGTCTTTGGCGAAAGCAATGCTGAGTTTTGAATTTTTATATTTTATAAAAGTGCCTAGCTAAATCTGGCACTTGAAATTTCTGAAGCGTAACTTGGCTAGATCATAAGTTTGGAATCCGGATTATGCTTTTGCAGTTTGATCTCAATATTGAATTATAAGCCGGGAATTGGACATTAAGTATTTGACACTCATTTAATATCAAGTTGAAATTAAATCCATGGGGTTTTTGTACGAATACCCCTCTTGGAAGGCCCAAATGAAATTTGACCAAGTTTTAAAAAGTATGTTTTTTTGACCTTCTGCTTATTTCATATTACCAAAACGGAACATTGTGCATGTGGGTTGGATCTCTCTCTCTCCTCTCACTCCTTCAGCTTTAGATTTTCCCACTTTCCGCTCTCTTTATTTATTTATTATTTTTTTTAAAGGGGAGTGAATAGCAAAAGTAGCGGAGTCAAGAGTAAGGATTGAAGCTGAGGATGTATTAGTAGCAAGAATGGGAGTCGAGAGCCCAACATGCGTGCACAATAAGGTCGTTTCAACAATTTCGGTTGAACTTAAGTTTTAAAAAGTGAGGTAGATTCTATTTTGGACCCAAAATTTGGGTAACTGTACAATTATCTGATGGACCCCCAATGCACCAAGGTCTATACACTTGTAAATAAGAAAGACAGAATATACCAAATGATTTAATTGGTGACAAGTGAAAAACGTTATACGTGGGTGTGAGTGCTTTTGATTTTGTGGGCTCTTATGATGATTCCGTTAGTTGGGGAAGGGGTGTTAAGTAGGCTGAGGTAGGGAGTCTTTTATTATCTTTTGGCATATTTGTTTTGTAGTTCTTTTGAGCATAGAGAAGGGGGAGATCTCAAACTCCCTAAGCATTTTGCCAAAACAGTGAATATATAATTCGGGTTCTATCATTATCTCTTAAATCCGTCCAAGTTAGCTCACTTATTCTTAAGAGCTTGTTTCACCATGATGTTTTAAATATTCTTCTCCTTGGATGAGGAGCCTGAAAATGAGATATGCCAACAATGTAAGCATAAGTACTTGTAGAATAATCCCCTTTAGATTATATTTCAACATTCTTTGAGATTGGATGTGTTATTCAACTTTTGTTAACTATTATCAGAACAACTAGCATTCTGAATTCTTTGTTTAACCCTGTTTGCAGATACATCTACCTTCAATCAACTATGTCAGCTTGCTAATGGGGAGTTCAAACCCTTGTTTATCTGA

mRNA sequence

ATGGTGAGTCTTGATGTGTTGATTGAGATTCTATCGAGGCTTTCGCCGGAACCTCTACTCCGATTCAAGTCTGTGAGTAAATTCTGGTACGCTCTAATCGATGACCCTAAATTTGTAGCAAAGCATTTATCAATTTCTCTTCAACAAAAACACCTTCATGTCAAGCGTATTGTGACGAACAACTCTGGGGAAAAGGAATTTGTATCCTCCATCCTTAAATTTCCCCTTGATCAATCTATGTCTGTTCTCGATGTCCATTTTCCATTCCATGATGACTACAAGTATTTACACTTTTTTGGCCATTCTCATGGTTTAATCTGTATCTGTGGGCGATATGATCTTTTTCTCTGTAATCTTGCTACTAGACAGTTTCGTAAACTCCCACCCTCAATTATTCTCCTCGATGAAATTCAGAATAAGCCTAAGGGCGACTGTTCAAGTAGGTATTTAATTTCGAGTATCACGGGATTTGGGTATGATGCGAGATCTAGGGATTTCAAGGTGGTTACAGTCATGCATTTTTCAGATGAAGTTTCAAGTATCAGTCCTCTAAGAGTGGAAATTTACGATATGAGCAAAGATAGATGGAGAGAAATTGAACCACTTATTTGTTGTAGTGTATTTTCGATGCCTTTATTTAACACGTTTCATGAAGGAAAATTTTACTGGTTGGGGACAGGCGTAACATTTGCTCCTTTGTATGAAATGATACTAACATTTGACATTAGCGAAGAGGAGATGGAGAAGGATAAGTCTGGCACTATTTCGTGGTCGAAGCTATTTACAATTGGCCCTAATTTTGGAATTATGTTTCCAATGTTGTTCGTGAGCTCCGATGAACTTTTAATAGAGTGTAAAGAAGGACTAATGATTTTGTACAACATTAAAACTCAACAATTCATAAAGCTCTCAATAAAAGGTCATCCAGGATTAATAAGGAATGAAACTAGGTACGAAGCTAGTTTATTTGTTAAGAGTTTGTTGTCTGTAGAAGGAGGAAATAATATGAGTCAAGTTTGGAAAAGTGTGAGCACGCATACACCGTCTGATGAAGAAGATGATCTCTCTATAAATACCTCTCTTCTCATTCCGTATCGAGCCGAAACTTCAATTTTGCCGCTTTCAAAATCCCGCGTTTATTTCCCTCTCTGGCTCTCGTTGTTCGATCGATTCGACTGCCATTTCCGGCGAATTCTCCGATTGCTTTATCAGATGGATACATCAAACCCTTCAGTTTTTGTCAATGCTGAGCTTTTGCGACTGTATATTGGAAGAAGAGTTCGGGCAGTGATTCAGGTACAGTCTGAAGGCAACGGAATCGTATTTGGTAAATCGACAGACGACAACCAGATCACTGTGAAAGGTTCCCCACCCTTTCCTCTTTCGAAGTTTGTCGAGGTCATTGGAGTTGCTGATACCGACAAATCCATACAAGCTGATGTATGGACAAATTTTGGTGATTCATTTGATACATCTACCTTCAATCAACTATGTCAGCTTGCTAATGGGGAGTTCAAACCCTTGTTTATCTGA

Coding sequence (CDS)

ATGGTGAGTCTTGATGTGTTGATTGAGATTCTATCGAGGCTTTCGCCGGAACCTCTACTCCGATTCAAGTCTGTGAGTAAATTCTGGTACGCTCTAATCGATGACCCTAAATTTGTAGCAAAGCATTTATCAATTTCTCTTCAACAAAAACACCTTCATGTCAAGCGTATTGTGACGAACAACTCTGGGGAAAAGGAATTTGTATCCTCCATCCTTAAATTTCCCCTTGATCAATCTATGTCTGTTCTCGATGTCCATTTTCCATTCCATGATGACTACAAGTATTTACACTTTTTTGGCCATTCTCATGGTTTAATCTGTATCTGTGGGCGATATGATCTTTTTCTCTGTAATCTTGCTACTAGACAGTTTCGTAAACTCCCACCCTCAATTATTCTCCTCGATGAAATTCAGAATAAGCCTAAGGGCGACTGTTCAAGTAGGTATTTAATTTCGAGTATCACGGGATTTGGGTATGATGCGAGATCTAGGGATTTCAAGGTGGTTACAGTCATGCATTTTTCAGATGAAGTTTCAAGTATCAGTCCTCTAAGAGTGGAAATTTACGATATGAGCAAAGATAGATGGAGAGAAATTGAACCACTTATTTGTTGTAGTGTATTTTCGATGCCTTTATTTAACACGTTTCATGAAGGAAAATTTTACTGGTTGGGGACAGGCGTAACATTTGCTCCTTTGTATGAAATGATACTAACATTTGACATTAGCGAAGAGGAGATGGAGAAGGATAAGTCTGGCACTATTTCGTGGTCGAAGCTATTTACAATTGGCCCTAATTTTGGAATTATGTTTCCAATGTTGTTCGTGAGCTCCGATGAACTTTTAATAGAGTGTAAAGAAGGACTAATGATTTTGTACAACATTAAAACTCAACAATTCATAAAGCTCTCAATAAAAGGTCATCCAGGATTAATAAGGAATGAAACTAGGTACGAAGCTAGTTTATTTGTTAAGAGTTTGTTGTCTGTAGAAGGAGGAAATAATATGAGTCAAGTTTGGAAAAGTGTGAGCACGCATACACCGTCTGATGAAGAAGATGATCTCTCTATAAATACCTCTCTTCTCATTCCGTATCGAGCCGAAACTTCAATTTTGCCGCTTTCAAAATCCCGCGTTTATTTCCCTCTCTGGCTCTCGTTGTTCGATCGATTCGACTGCCATTTCCGGCGAATTCTCCGATTGCTTTATCAGATGGATACATCAAACCCTTCAGTTTTTGTCAATGCTGAGCTTTTGCGACTGTATATTGGAAGAAGAGTTCGGGCAGTGATTCAGGTACAGTCTGAAGGCAACGGAATCGTATTTGGTAAATCGACAGACGACAACCAGATCACTGTGAAAGGTTCCCCACCCTTTCCTCTTTCGAAGTTTGTCGAGGTCATTGGAGTTGCTGATACCGACAAATCCATACAAGCTGATGTATGGACAAATTTTGGTGATTCATTTGATACATCTACCTTCAATCAACTATGTCAGCTTGCTAATGGGGAGTTCAAACCCTTGTTTATCTGA

Protein sequence

MVSLDVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGEKEFVSSILKFPLDQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICGRYDLFLCNLATRQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSISPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWLGTGVTFAPLYEMILTFDISEEEMEKDKSGTISWSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIRNETRYEASLFVKSLLSVEGGNNMSQVWKSVSTHTPSDEEDDLSINTSLLIPYRAETSILPLSKSRVYFPLWLSLFDRFDCHFRRILRLLYQMDTSNPSVFVNAELLRLYIGRRVRAVIQVQSEGNGIVFGKSTDDNQITVKGSPPFPLSKFVEVIGVADTDKSIQADVWTNFGDSFDTSTFNQLCQLANGEFKPLFI

Homology

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BLAST of ClCG10G018890.2 vs. NCBI nr
Match: XP_038906036.1 (F-box protein CPR1-like [Benincasa hispida])

HSP 1 Score: 336.7 bits (862), Expect = 3.6e-88
Identity = 190/383 (49.61%), Postives = 239/383 (62.40%), Query Frame = 0


Query: 5   DVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGE 64
           +V+IEILSRL PE LLRFK V K WYALI+DPKF AKH S SLQ K + +KR+VT NSG 
Sbjct: 10  EVMIEILSRLPPESLLRFKCVRKSWYALINDPKFKAKHFSNSLQHKQVLLKRLVTKNSGN 69

Query: 65  KEFVSSILKFPL--DQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLAT 124
           KE + S LK PL  D+S+SV D+  PF +D+++    GHSHGL+C+   R D+FLCN +T
Sbjct: 70  KENIFSFLKLPLSIDRSVSVSDLDLPFDEDFRFFEIHGHSHGLLCLTDLRKDIFLCNPST 129

Query: 125 RQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSI 184
           R+F KLPPSI+LL E   +P G  SS    ++  GFGYD++SRDFKVV V+ F +     
Sbjct: 130 REFHKLPPSILLLTEPPAEPDGYDSS----TNAVGFGYDSKSRDFKVVRVVDFVEGPGYF 189

Query: 185 SPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWLG--TGVTFAPLYEMILT 244
            P RVEIYD+SKDRWREIE  +C  VF  P F  +HEG +YW     G T     E+I T
Sbjct: 190 HPPRVEIYDLSKDRWREIETPVCGHVFWAPCFEMYHEGTYYWWAETEGGT-----EIIQT 249

Query: 245 FDISEE---------------------------------------------EMEKDKSGT 304
           FD+SEE                                             EMEKD+SG 
Sbjct: 250 FDMSEEVFGRILVPESFQGTGDRYRSLGVLNGSIVLFHYPSRGDERSFDIWEMEKDESGG 309

Query: 305 ISWSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIRN 338
           +SWSKL TIGP  GI  P+LFVSSDELL+E  EG +ILYNI+TQQ  ++ +KGHP     
Sbjct: 310 VSWSKLLTIGPVSGIEKPLLFVSSDELLMEASEGQVILYNIRTQQLKEVPVKGHP----- 369

[Close]

BLAST of ClCG10G018890.2 vs. NCBI nr
Match: XP_022935692.1 (F-box protein CPR30-like [Cucurbita moschata])

HSP 1 Score: 333.2 bits (853), Expect = 4.0e-87
Identity = 189/383 (49.35%), Postives = 238/383 (62.14%), Query Frame = 0


Query: 5   DVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGE 64
           +V+IEILSRL PE LLRFK+V K WYALI++PKF  KH S SL+QKH+ +KR+VT NSG+
Sbjct: 10  EVMIEILSRLPPESLLRFKTVRKSWYALINNPKFATKHFSNSLKQKHVLLKRLVTKNSGK 69

Query: 65  KEFVSSILKF--PLDQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLAT 124
           KE + S LKF  PLD S+ V DV  PF +D++Y    GHSHGL+C+   R D+FLCN AT
Sbjct: 70  KENIFSFLKFPLPLDGSVPVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLCNPAT 129

Query: 125 RQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSI 184
           R+FRKLPPSI+LL E   +P G  SS    ++  GFGYD++SRDFKVV V++F +     
Sbjct: 130 REFRKLPPSILLLTEPPTEPDGYDSS----TNAVGFGYDSKSRDFKVVRVVNFVEGPGYF 189

Query: 185 SPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYW---LGTGVTFAPLYEMIL 244
            P RVEIYD+SKDRWREIE  IC  VF  P F  +HEG +YW      GV      E+I 
Sbjct: 190 HPPRVEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYWWADTNEGV------EIIQ 249

Query: 245 TFDISEE---------------------------------------------EMEKDKSG 304
           +FD+SEE                                              MEKD+ G
Sbjct: 250 SFDMSEEVFGQISMPESFEEKREKYRSLGVLNGSIVLFRYPSRGDEREFDIWGMEKDEFG 309

Query: 305 TISWSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIR 337
            +SWSKL  IGP  GI  P++FVS DELL+E  EG ++LYN +TQQ  +L I GHP    
Sbjct: 310 GVSWSKLLRIGPLRGIEKPLVFVSFDELLMEANEGQIVLYNARTQQLKELPINGHP---- 369

[Close]

BLAST of ClCG10G018890.2 vs. NCBI nr
Match: XP_022983805.1 (F-box protein CPR1-like [Cucurbita maxima])

HSP 1 Score: 331.3 bits (848), Expect = 1.5e-86
Identity = 186/380 (48.95%), Postives = 235/380 (61.84%), Query Frame = 0


Query: 5   DVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGE 64
           +V+IEILSRL PE LLRFK+V K WYALID+PKF  KH S SL+ KH+ +KR+VT NSG+
Sbjct: 10  EVMIEILSRLPPESLLRFKTVRKSWYALIDNPKFATKHFSNSLKHKHVLLKRLVTKNSGK 69

Query: 65  KEFVSSILKF--PLDQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLAT 124
           KE + S LKF  PLD S+ V DV +PF +D++Y    GHSHGL+C+   R D+FLCN AT
Sbjct: 70  KENIFSFLKFPLPLDGSVPVFDVDWPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLCNPAT 129

Query: 125 RQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSI 184
           R+FRKLP SI+LL E   +P G  SS    ++  GFGYD++S+DFKVV V++F +     
Sbjct: 130 REFRKLPQSILLLTEPPTEPDGYDSS----TNAVGFGYDSKSKDFKVVRVVNFVEGPGYF 189

Query: 185 SPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWLGTGVTFAPLYEMILTFD 244
            P R EIYD+SKDRWREIE  IC  VF  P F  +HEG +YW           E+I +FD
Sbjct: 190 HPPRAEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYW---WADTDDKEEIIQSFD 249

Query: 245 ISEE---------------------------------------------EMEKDKSGTIS 304
           +SEE                                              MEKD+ G +S
Sbjct: 250 MSEEVFRRIPVPESFEGERERYRSMGILNGSIVLFHYPSRGDEREFDIWGMEKDEFGGVS 309

Query: 305 WSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIRNET 337
           WSKL TIGP  GI  P++FVSSDELL+E  EG ++LYN + QQ  +L IKGHP       
Sbjct: 310 WSKLLTIGPLRGIEKPLVFVSSDELLMEANEGQIVLYNARIQQLKELPIKGHP------A 369

[Close]

BLAST of ClCG10G018890.2 vs. NCBI nr
Match: XP_023526117.1 (F-box protein CPR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.1 bits (845), Expect = 3.4e-86
Identity = 188/383 (49.09%), Postives = 239/383 (62.40%), Query Frame = 0


Query: 5   DVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGE 64
           +V+IEILSRL PE LLRFK+V K WYALID+PKF  KH S SL+QKH+ +KR+VT NSG+
Sbjct: 10  EVMIEILSRLPPESLLRFKTVRKSWYALIDNPKFATKHFSNSLKQKHVLLKRLVTKNSGK 69

Query: 65  KEFVSSILKF--PLDQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLAT 124
           KE + S LKF  PLD S+ V DV  PF +D++Y    GHSHGL+C+   R D+FLCN AT
Sbjct: 70  KENIFSFLKFPLPLDGSVPVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLCNPAT 129

Query: 125 RQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSI 184
           R+FRKLPPSI+LL +   +P G  SS    ++  GFGYD++SRDFKVV V++F +     
Sbjct: 130 REFRKLPPSILLLTKPPTEPDGYDSS----TNAVGFGYDSKSRDFKVVRVVNFVEGPGYF 189

Query: 185 SPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYW---LGTGVTFAPLYEMIL 244
              RVEIYD+SKDRWREIE  IC  VF  P F  +HEG +YW      GV      E+I 
Sbjct: 190 HLPRVEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYWWADTDEGV------EIIQ 249

Query: 245 TFDISEE---------------------------------------------EMEKDKSG 304
           +FD++EE                                             E+ KD+ G
Sbjct: 250 SFDMTEEVFRRISVPESFEGKRERYRSMGVLNGSIVLFHYPSRGDEREFDIWEIVKDEFG 309

Query: 305 TISWSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIR 337
            +SWSKL TIGP  GI  P++FVSSDELL+E  EG M+LYN +TQQ+ +L I GHP    
Sbjct: 310 GVSWSKLLTIGPLGGIEKPLVFVSSDELLMEANEGRMVLYNARTQQWKELPINGHP---- 369

[Close]

BLAST of ClCG10G018890.2 vs. NCBI nr
Match: XP_008443403.1 (PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053766.1 F-box protein CPR30-like [Cucumis melo var. makuwa])

HSP 1 Score: 314.3 bits (804), Expect = 1.9e-81
Identity = 176/382 (46.07%), Postives = 236/382 (61.78%), Query Frame = 0


Query: 6   VLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGEK 65
           V+IEILSRL PE LLRFK V K WYAL +DPKF AKH S SLQ KHL +KR+VT +SG+K
Sbjct: 11  VIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLKRLVTKDSGKK 70

Query: 66  EFVSSILKFPLD--QSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLATR 125
           E + SILK PL    S+S+ D+  PFH+D+++    GHSHGL+C+   R D+FLCN +TR
Sbjct: 71  ENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLRKDIFLCNPSTR 130

Query: 126 QFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSIS 185
           +F +LPPSI+LL E   +P    SS    ++  GFGYD++SRDFKVV V+ F +      
Sbjct: 131 EFHQLPPSILLLPEPSAEPDDYDSS----TNAVGFGYDSKSRDFKVVRVVDFVEGPGYFY 190

Query: 186 PLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWL--GTGVTFAPLYEMILTF 245
           P +VE+YD+SK+RWREI+  +   VF  P F  FHEG +YW     G T     E+ILTF
Sbjct: 191 PPKVEVYDLSKERWREIQTPVSGHVFWAPCFEVFHEGTYYWWADADGNT-----EIILTF 250

Query: 246 DISEE---------------------------------------------EMEKDKSGTI 305
           D+SEE                                             EM KD+SG +
Sbjct: 251 DMSEEVFGQIPVPESFQGTGDWYRSLGVLDGRIVLFHYPSRGDERRFDMWEMGKDESGGV 310

Query: 306 SWSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIRNE 338
           SWSK+ TIGP  GI  P+LF+SS+ELL+E   G +I+YNI++++  ++ IKG PG     
Sbjct: 311 SWSKVLTIGPVSGIEKPLLFISSEELLMEGNGGQLIVYNIRSEEVKEVPIKGSPG----- 370

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy Swiss-Prot
Match: Q6NLG7 (Replication protein A 14 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA3B PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 9.1e-34
Identity = 69/106 (65.09%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 405 MDTSNPSVFVNAELLRLYIGRRVRAVIQVQSEGNGIVFGKSTDDNQITVKGSPPFPLSKF 464
           MDTS+P+ FVN  LLR YIG++VRAVIQV     G V GKSTDD QI VKGSP  PL+ +
Sbjct: 1   MDTSSPAAFVNGALLRRYIGQKVRAVIQVIRSDVGSVIGKSTDDQQIVVKGSPQPPLTTY 60

Query: 465 VEVIGVADTDKSIQADVWTNFGDSFDTSTFNQLCQLANGEFKPLFI 511
           +EVIG+A+TD +I+A+VWTNFGDSFD   +N+LC+LANGEF+ LFI
Sbjct: 61  LEVIGIAETDNTIRAEVWTNFGDSFDVQNYNELCKLANGEFRHLFI 106

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy Swiss-Prot
Match: Q9LXK1 (Replication protein A 14 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA3A PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.9e-31
Identity = 66/107 (61.68%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 405 MDTSNPSVFVNAELLRLYIGRRVRAVIQVQSEGNGIVFGKSTDDNQITVKG-SPPFPLSK 464
           MDTS+PS FVN  LLR +IG++VR VIQV     G V GKSTDD QI V+G SPP PL+ 
Sbjct: 1   MDTSSPSAFVNGALLRRFIGQKVRTVIQVTGSEIGSVVGKSTDDLQIVVRGSSPPSPLTT 60

Query: 465 FVEVIGVADTDKSIQADVWTNFGDSFDTSTFNQLCQLANGEFKPLFI 511
           ++EVIG+A++D +I+A+ WTNFG++FDT  +N+LC+LANGEFK LFI
Sbjct: 61  YLEVIGIAESDNAIRAETWTNFGNTFDTQNYNELCKLANGEFKHLFI 107

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy Swiss-Prot
Match: Q9SDK9 (Replication protein A 14 kDa subunit OS=Oryza sativa subsp. japonica OX=39947 GN=RPA3 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.0e-28
Identity = 54/106 (50.94%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 405 MDTSNPSVFVNAELLRLYIGRRVRAVIQVQSEGNGIVFGKSTDDNQITVKGSPPFPLSKF 464
           MDTS P+ FVN E+L++++GRRVR V+Q Q E  G++ G+STD +Q+T+KG+   P+S +
Sbjct: 1   MDTSGPAAFVNGEILKMFVGRRVRTVVQAQREEGGLLIGQSTDGHQLTIKGASGAPMSHY 60

Query: 465 VEVIGVADTDKSIQADVWTNFGDSFDTSTFNQLCQLANGEFKPLFI 511
           VE+IG+A+ +++I+A+V T+FG++FD + FN LC+LANG+ K LF+
Sbjct: 61  VEIIGIAEPNQAIRAEVCTDFGENFDPAPFNGLCKLANGQMKDLFL 106

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy Swiss-Prot
Match: Q9SU30 (F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 7.0e-18
Identity = 99/393 (25.19%), Postives = 164/393 (41.73%), Query Frame = 0


Query: 2   VSLDVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNN 61
           + +D++ +I  RL  + L+R +++SK  Y LI+DP F+  HL   LQ    H+  ++   
Sbjct: 4   IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGD-HLMILLRG- 63

Query: 62  SGEKEFVSSILKFPLDQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICGR-YDLFLCNLA 121
                    +    LD   SV DV  P          FG S+GLI +     DL + N +
Sbjct: 64  ------ALRLYSVDLDSLDSVSDVEHPMKRGGP-TEVFGSSNGLIGLSNSPTDLAVFNPS 123

Query: 122 TRQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHF----SD 181
           TRQ  +LPPS I L      P G  +  Y+     G GYD+ S D+KVV ++ F     D
Sbjct: 124 TRQIHRLPPSSIDL------PDGSSTRGYV---FYGLGYDSVSDDYKVVRMVQFKIDSED 183

Query: 182 EVSSISPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWLGTGVTFAP---- 241
           E+    P  V+++ + K+ W+ IE +      S+ L   F+    Y  G GV        
Sbjct: 184 ELGCSFPYEVKVFSLKKNSWKRIESV----ASSIQLLFYFYYHLLYRRGYGVLAGNSLHW 243

Query: 242 ---------LYEMILTFDISEEEME----------------------------------- 301
                     + +I+ FD++ EE E                                   
Sbjct: 244 VLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQS 303

Query: 302 -------KDKSGTISWSKLFTIG-----PNFGIMFPMLF-VSSDELLIECKEGLMILYNI 329
                  K+ +   SW+K+FT+       +F  M P+++     ++L+E     ++ +++
Sbjct: 304 YVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDL 363

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy Swiss-Prot
Match: Q8GXC7 (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.7e-12
Identity = 90/402 (22.39%), Postives = 157/402 (39.05%), Query Frame = 0


Query: 5   DVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQ---KHLHVKRIVTNN 64
           +++ EIL RL  + + RF+ VSK +  L  DP F   HL + L+    + LH K IV+++
Sbjct: 39  EIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIVSSH 98

Query: 65  S-----------GEKEFVSSILKFPLDQSMSVLD------VHFPFHDDYK---------- 124
           +           G ++  +    +PL    S+        V    +DD +          
Sbjct: 99  NLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNAKSY 158

Query: 125 ---YLHFFGHSHGLICIC-GRYDLFLCNLATRQFRKLPPSIILLDEIQNKPKGDCSSRYL 184
              ++   G S+GL+CI  G   +FL N  T   ++LP +         +PK     R  
Sbjct: 159 RRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENF--------RPKSVEYERDN 218

Query: 185 ISSITGFGYDARSRDFKVVTVMHFSDEVSSISPLRVEIYDMSKDRWREIEPLICCSVFSM 244
             +  GFG+D  + D+K+V ++  S+++     L   +Y +  D WR I  L        
Sbjct: 219 FQTY-GFGFDGLTDDYKLVKLVATSEDI-----LDASVYSLKADSWRRICNLNYEHNDGS 278

Query: 245 PLFNTFHEGKFYWLGTGVTFAPLYEMILTFDISEEEMEK--------------------- 304
                   G  +W+ T         +++ FDI  EE  +                     
Sbjct: 279 YTSGVHFNGAIHWVFTESRHN--QRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGS 338

Query: 305 ----------------------DKSGTISWSKLFTIGPNFGIMFPMLFVSSDELLIECKE 330
                                 +     SWS++  I   +  M P+    +DE ++   +
Sbjct: 339 LNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSRI-RINLLYRSMKPLCSTKNDEEVLLELD 398

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy TrEMBL
Match: A0A6J1F6B1 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.9e-87
Identity = 189/383 (49.35%), Postives = 238/383 (62.14%), Query Frame = 0


Query: 5   DVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGE 64
           +V+IEILSRL PE LLRFK+V K WYALI++PKF  KH S SL+QKH+ +KR+VT NSG+
Sbjct: 10  EVMIEILSRLPPESLLRFKTVRKSWYALINNPKFATKHFSNSLKQKHVLLKRLVTKNSGK 69

Query: 65  KEFVSSILKF--PLDQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLAT 124
           KE + S LKF  PLD S+ V DV  PF +D++Y    GHSHGL+C+   R D+FLCN AT
Sbjct: 70  KENIFSFLKFPLPLDGSVPVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLCNPAT 129

Query: 125 RQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSI 184
           R+FRKLPPSI+LL E   +P G  SS    ++  GFGYD++SRDFKVV V++F +     
Sbjct: 130 REFRKLPPSILLLTEPPTEPDGYDSS----TNAVGFGYDSKSRDFKVVRVVNFVEGPGYF 189

Query: 185 SPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYW---LGTGVTFAPLYEMIL 244
            P RVEIYD+SKDRWREIE  IC  VF  P F  +HEG +YW      GV      E+I 
Sbjct: 190 HPPRVEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYWWADTNEGV------EIIQ 249

Query: 245 TFDISEE---------------------------------------------EMEKDKSG 304
           +FD+SEE                                              MEKD+ G
Sbjct: 250 SFDMSEEVFGQISMPESFEEKREKYRSLGVLNGSIVLFRYPSRGDEREFDIWGMEKDEFG 309

Query: 305 TISWSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIR 337
            +SWSKL  IGP  GI  P++FVS DELL+E  EG ++LYN +TQQ  +L I GHP    
Sbjct: 310 GVSWSKLLRIGPLRGIEKPLVFVSFDELLMEANEGQIVLYNARTQQLKELPINGHP---- 369

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy TrEMBL
Match: A0A6J1J6Y5 (F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 7.3e-87
Identity = 186/380 (48.95%), Postives = 235/380 (61.84%), Query Frame = 0


Query: 5   DVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGE 64
           +V+IEILSRL PE LLRFK+V K WYALID+PKF  KH S SL+ KH+ +KR+VT NSG+
Sbjct: 10  EVMIEILSRLPPESLLRFKTVRKSWYALIDNPKFATKHFSNSLKHKHVLLKRLVTKNSGK 69

Query: 65  KEFVSSILKF--PLDQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLAT 124
           KE + S LKF  PLD S+ V DV +PF +D++Y    GHSHGL+C+   R D+FLCN AT
Sbjct: 70  KENIFSFLKFPLPLDGSVPVFDVDWPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLCNPAT 129

Query: 125 RQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSI 184
           R+FRKLP SI+LL E   +P G  SS    ++  GFGYD++S+DFKVV V++F +     
Sbjct: 130 REFRKLPQSILLLTEPPTEPDGYDSS----TNAVGFGYDSKSKDFKVVRVVNFVEGPGYF 189

Query: 185 SPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWLGTGVTFAPLYEMILTFD 244
            P R EIYD+SKDRWREIE  IC  VF  P F  +HEG +YW           E+I +FD
Sbjct: 190 HPPRAEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYW---WADTDDKEEIIQSFD 249

Query: 245 ISEE---------------------------------------------EMEKDKSGTIS 304
           +SEE                                              MEKD+ G +S
Sbjct: 250 MSEEVFRRIPVPESFEGERERYRSMGILNGSIVLFHYPSRGDEREFDIWGMEKDEFGGVS 309

Query: 305 WSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIRNET 337
           WSKL TIGP  GI  P++FVSSDELL+E  EG ++LYN + QQ  +L IKGHP       
Sbjct: 310 WSKLLTIGPLRGIEKPLVFVSSDELLMEANEGQIVLYNARIQQLKELPIKGHP------A 369

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy TrEMBL
Match: A0A5A7UHP3 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001510 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 9.3e-82
Identity = 176/382 (46.07%), Postives = 236/382 (61.78%), Query Frame = 0


Query: 6   VLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGEK 65
           V+IEILSRL PE LLRFK V K WYAL +DPKF AKH S SLQ KHL +KR+VT +SG+K
Sbjct: 11  VIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLKRLVTKDSGKK 70

Query: 66  EFVSSILKFPLD--QSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLATR 125
           E + SILK PL    S+S+ D+  PFH+D+++    GHSHGL+C+   R D+FLCN +TR
Sbjct: 71  ENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLRKDIFLCNPSTR 130

Query: 126 QFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSIS 185
           +F +LPPSI+LL E   +P    SS    ++  GFGYD++SRDFKVV V+ F +      
Sbjct: 131 EFHQLPPSILLLPEPSAEPDDYDSS----TNAVGFGYDSKSRDFKVVRVVDFVEGPGYFY 190

Query: 186 PLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWL--GTGVTFAPLYEMILTF 245
           P +VE+YD+SK+RWREI+  +   VF  P F  FHEG +YW     G T     E+ILTF
Sbjct: 191 PPKVEVYDLSKERWREIQTPVSGHVFWAPCFEVFHEGTYYWWADADGNT-----EIILTF 250

Query: 246 DISEE---------------------------------------------EMEKDKSGTI 305
           D+SEE                                             EM KD+SG +
Sbjct: 251 DMSEEVFGQIPVPESFQGTGDWYRSLGVLDGRIVLFHYPSRGDERRFDMWEMGKDESGGV 310

Query: 306 SWSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIRNE 338
           SWSK+ TIGP  GI  P+LF+SS+ELL+E   G +I+YNI++++  ++ IKG PG     
Sbjct: 311 SWSKVLTIGPVSGIEKPLLFISSEELLMEGNGGQLIVYNIRSEEVKEVPIKGSPG----- 370

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy TrEMBL
Match: A0A5D3DPN6 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007960 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 9.3e-82
Identity = 176/382 (46.07%), Postives = 236/382 (61.78%), Query Frame = 0


Query: 6   VLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGEK 65
           V+IEILSRL PE LLRFK V K WYAL +DPKF AKH S SLQ KHL +KR+VT +SG+K
Sbjct: 11  VIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLKRLVTKDSGKK 70

Query: 66  EFVSSILKFPLD--QSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLATR 125
           E + SILK PL    S+S+ D+  PFH+D+++    GHSHGL+C+   R D+FLCN +TR
Sbjct: 71  ENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLRKDIFLCNPSTR 130

Query: 126 QFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSIS 185
           +F +LPPSI+LL E   +P    SS    ++  GFGYD++SRDFKVV V+ F +      
Sbjct: 131 EFHQLPPSILLLPEPSAEPDDYDSS----TNAVGFGYDSKSRDFKVVRVVDFVEGPGYFY 190

Query: 186 PLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWL--GTGVTFAPLYEMILTF 245
           P +VE+YD+SK+RWREI+  +   VF  P F  FHEG +YW     G T     E+ILTF
Sbjct: 191 PPKVEVYDLSKERWREIQTPVSGHVFWAPCFEVFHEGTYYWWADADGNT-----EIILTF 250

Query: 246 DISEE---------------------------------------------EMEKDKSGTI 305
           D+SEE                                             EM KD+SG +
Sbjct: 251 DMSEEVFGQIPVPESFQGTGDWYRSLGVLDGCIVLFHYPSRGDERRFDMWEMGKDESGGV 310

Query: 306 SWSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIRNE 338
           SWSK+ TIGP  GI  P+LF+SS+ELL+E   G +I+YNI++++  ++ IKG PG     
Sbjct: 311 SWSKVLTIGPVSGIEKPLLFISSEELLMEGNGGQLIVYNIRSEEVKEVPIKGSPG----- 370

[Close]

BLAST of ClCG10G018890.2 vs. ExPASy TrEMBL
Match: A0A1S3B7G6 (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486997 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 9.3e-82
Identity = 176/382 (46.07%), Postives = 236/382 (61.78%), Query Frame = 0


Query: 6   VLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNNSGEK 65
           V+IEILSRL PE LLRFK V K WYAL +DPKF AKH S SLQ KHL +KR+VT +SG+K
Sbjct: 11  VIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLKRLVTKDSGKK 70

Query: 66  EFVSSILKFPLD--QSMSVLDVHFPFHDDYKYLHFFGHSHGLICICG-RYDLFLCNLATR 125
           E + SILK PL    S+S+ D+  PFH+D+++    GHSHGL+C+   R D+FLCN +TR
Sbjct: 71  ENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLRKDIFLCNPSTR 130

Query: 126 QFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHFSDEVSSIS 185
           +F +LPPSI+LL E   +P    SS    ++  GFGYD++SRDFKVV V+ F +      
Sbjct: 131 EFHQLPPSILLLPEPSAEPDDYDSS----TNAVGFGYDSKSRDFKVVRVVDFVEGPGYFY 190

Query: 186 PLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWL--GTGVTFAPLYEMILTF 245
           P +VE+YD+SK+RWREI+  +   VF  P F  FHEG +YW     G T     E+ILTF
Sbjct: 191 PPKVEVYDLSKERWREIQTPVSGHVFWAPCFEVFHEGTYYWWADADGNT-----EIILTF 250

Query: 246 DISEE---------------------------------------------EMEKDKSGTI 305
           D+SEE                                             EM KD+SG +
Sbjct: 251 DMSEEVFGQIPVPESFQGTGDWYRSLGVLDGRIVLFHYPSRGDERRFDMWEMGKDESGGV 310

Query: 306 SWSKLFTIGPNFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQFIKLSIKGHPGLIRNE 338
           SWSK+ TIGP  GI  P+LF+SS+ELL+E   G +I+YNI++++  ++ IKG PG     
Sbjct: 311 SWSKVLTIGPVSGIEKPLLFISSEELLMEGNGGQLIVYNIRSEEVKEVPIKGSPG----- 370

[Close]

BLAST of ClCG10G018890.2 vs. TAIR 10
Match: AT4G18590.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 146.4 bits (368), Expect = 6.4e-35
Identity = 69/106 (65.09%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 405 MDTSNPSVFVNAELLRLYIGRRVRAVIQVQSEGNGIVFGKSTDDNQITVKGSPPFPLSKF 464
           MDTS+P+ FVN  LLR YIG++VRAVIQV     G V GKSTDD QI VKGSP  PL+ +
Sbjct: 1   MDTSSPAAFVNGALLRRYIGQKVRAVIQVIRSDVGSVIGKSTDDQQIVVKGSPQPPLTTY 60

Query: 465 VEVIGVADTDKSIQADVWTNFGDSFDTSTFNQLCQLANGEFKPLFI 511
           +EVIG+A+TD +I+A+VWTNFGDSFD   +N+LC+LANGEF+ LFI
Sbjct: 61  LEVIGIAETDNTIRAEVWTNFGDSFDVQNYNELCKLANGEFRHLFI 106

[Close]

BLAST of ClCG10G018890.2 vs. TAIR 10
Match: AT3G52630.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-32
Identity = 66/107 (61.68%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 405 MDTSNPSVFVNAELLRLYIGRRVRAVIQVQSEGNGIVFGKSTDDNQITVKG-SPPFPLSK 464
           MDTS+PS FVN  LLR +IG++VR VIQV     G V GKSTDD QI V+G SPP PL+ 
Sbjct: 1   MDTSSPSAFVNGALLRRFIGQKVRTVIQVTGSEIGSVVGKSTDDLQIVVRGSSPPSPLTT 60

Query: 465 FVEVIGVADTDKSIQADVWTNFGDSFDTSTFNQLCQLANGEFKPLFI 511
           ++EVIG+A++D +I+A+ WTNFG++FDT  +N+LC+LANGEFK LFI
Sbjct: 61  YLEVIGIAESDNAIRAETWTNFGNTFDTQNYNELCKLANGEFKHLFI 107

[Close]

BLAST of ClCG10G018890.2 vs. TAIR 10
Match: AT3G52630.2 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-32
Identity = 66/107 (61.68%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 405 MDTSNPSVFVNAELLRLYIGRRVRAVIQVQSEGNGIVFGKSTDDNQITVKG-SPPFPLSK 464
           MDTS+PS FVN  LLR +IG++VR VIQV     G V GKSTDD QI V+G SPP PL+ 
Sbjct: 1   MDTSSPSAFVNGALLRRFIGQKVRTVIQVTGSEIGSVVGKSTDDLQIVVRGSSPPSPLTT 60

Query: 465 FVEVIGVADTDKSIQADVWTNFGDSFDTSTFNQLCQLANGEFKPLFI 511
           ++EVIG+A++D +I+A+ WTNFG++FDT  +N+LC+LANGEFK LFI
Sbjct: 61  YLEVIGIAESDNAIRAETWTNFGNTFDTQNYNELCKLANGEFKHLFI 107

[Close]

BLAST of ClCG10G018890.2 vs. TAIR 10
Match: AT4G12560.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 93.6 bits (231), Expect = 5.0e-19
Identity = 99/393 (25.19%), Postives = 164/393 (41.73%), Query Frame = 0


Query: 2   VSLDVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNN 61
           + +D++ +I  RL  + L+R +++SK  Y LI+DP F+  HL   LQ    H+  ++   
Sbjct: 4   IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGD-HLMILLRG- 63

Query: 62  SGEKEFVSSILKFPLDQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICGR-YDLFLCNLA 121
                    +    LD   SV DV  P          FG S+GLI +     DL + N +
Sbjct: 64  ------ALRLYSVDLDSLDSVSDVEHPMKRGGP-TEVFGSSNGLIGLSNSPTDLAVFNPS 123

Query: 122 TRQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHF----SD 181
           TRQ  +LPPS I L      P G  +  Y+     G GYD+ S D+KVV ++ F     D
Sbjct: 124 TRQIHRLPPSSIDL------PDGSSTRGYV---FYGLGYDSVSDDYKVVRMVQFKIDSED 183

Query: 182 EVSSISPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWLGTGVTFAP---- 241
           E+    P  V+++ + K+ W+ IE +      S+ L   F+    Y  G GV        
Sbjct: 184 ELGCSFPYEVKVFSLKKNSWKRIESV----ASSIQLLFYFYYHLLYRRGYGVLAGNSLHW 243

Query: 242 ---------LYEMILTFDISEEEME----------------------------------- 301
                     + +I+ FD++ EE E                                   
Sbjct: 244 VLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQS 303

Query: 302 -------KDKSGTISWSKLFTIG-----PNFGIMFPMLF-VSSDELLIECKEGLMILYNI 329
                  K+ +   SW+K+FT+       +F  M P+++     ++L+E     ++ +++
Sbjct: 304 YVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDL 363

[Close]

BLAST of ClCG10G018890.2 vs. TAIR 10
Match: AT4G12560.2 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 93.6 bits (231), Expect = 5.0e-19
Identity = 99/393 (25.19%), Postives = 164/393 (41.73%), Query Frame = 0


Query: 2   VSLDVLIEILSRLSPEPLLRFKSVSKFWYALIDDPKFVAKHLSISLQQKHLHVKRIVTNN 61
           + +D++ +I  RL  + L+R +++SK  Y LI+DP F+  HL   LQ    H+  ++   
Sbjct: 4   IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGD-HLMILLRG- 63

Query: 62  SGEKEFVSSILKFPLDQSMSVLDVHFPFHDDYKYLHFFGHSHGLICICGR-YDLFLCNLA 121
                    +    LD   SV DV  P          FG S+GLI +     DL + N +
Sbjct: 64  ------ALRLYSVDLDSLDSVSDVEHPMKRGGP-TEVFGSSNGLIGLSNSPTDLAVFNPS 123

Query: 122 TRQFRKLPPSIILLDEIQNKPKGDCSSRYLISSITGFGYDARSRDFKVVTVMHF----SD 181
           TRQ  +LPPS I L      P G  +  Y+     G GYD+ S D+KVV ++ F     D
Sbjct: 124 TRQIHRLPPSSIDL------PDGSSTRGYV---FYGLGYDSVSDDYKVVRMVQFKIDSED 183

Query: 182 EVSSISPLRVEIYDMSKDRWREIEPLICCSVFSMPLFNTFHEGKFYWLGTGVTFAP---- 241
           E+    P  V+++ + K+ W+ IE +      S+ L   F+    Y  G GV        
Sbjct: 184 ELGCSFPYEVKVFSLKKNSWKRIESV----ASSIQLLFYFYYHLLYRRGYGVLAGNSLHW 243

Query: 242 ---------LYEMILTFDISEEEME----------------------------------- 301
                     + +I+ FD++ EE E                                   
Sbjct: 244 VLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQS 303

Query: 302 -------KDKSGTISWSKLFTIG-----PNFGIMFPMLF-VSSDELLIECKEGLMILYNI 329
                  K+ +   SW+K+FT+       +F  M P+++     ++L+E     ++ +++
Sbjct: 304 YVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDL 363

The following BLAST results are available for this feature:

BLAST of ClCG10G018890.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906036.1	3.6e-88	49.61	F-box protein CPR1-like [Benincasa hispida]	[more]
XP_022935692.1	4.0e-87	49.35	F-box protein CPR30-like [Cucurbita moschata]	[more]
XP_022983805.1	1.5e-86	48.95	F-box protein CPR1-like [Cucurbita maxima]	[more]
XP_023526117.1	3.4e-86	49.09	F-box protein CPR1-like [Cucurbita pepo subsp. pepo]	[more]
XP_008443403.1	1.9e-81	46.07	PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053766.1 F-box protein C...	[more]

BLAST of ClCG10G018890.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLG7	9.1e-34	65.09	Replication protein A 14 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA3B ...	[more]
Q9LXK1	1.9e-31	61.68	Replication protein A 14 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA3A ...	[more]
Q9SDK9	2.0e-28	50.94	Replication protein A 14 kDa subunit OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q9SU30	7.0e-18	25.19	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2	[more]
Q8GXC7	5.7e-12	22.39	F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g0624...	[more]

BLAST of ClCG10G018890.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6B1	1.9e-87	49.35	F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1	[more]
A0A6J1J6Y5	7.3e-87	48.95	F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1	[more]
A0A5A7UHP3	9.3e-82	46.07	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3DPN6	9.3e-82	46.07	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B7G6	9.3e-82	46.07	F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486997 PE=4 SV=1	[more]

BLAST of ClCG10G018890.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18590.1	6.4e-35	65.09	Nucleic acid-binding, OB-fold-like protein	[more]
AT3G52630.1	1.3e-32	61.68	Nucleic acid-binding, OB-fold-like protein	[more]
AT3G52630.2	1.3e-32	61.68	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G12560.1	5.0e-19	25.19	F-box and associated interaction domains-containing protein	[more]
AT4G12560.2	5.0e-19	25.19	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 2..42 e-value: 9.1E-7 score: 38.5
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 2..42 e-value: 5.7E-8 score: 32.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..43 score: 8.676143
None	No IPR available	GENE3D	2.40.50.140		coord: 405..510 e-value: 2.1E-19 score: 71.5
None	No IPR available	GENE3D	1.20.1280.50		coord: 3..38 e-value: 2.6E-5 score: 26.2
None	No IPR available	PANTHER	PTHR47058	REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED	coord: 403..510
None	No IPR available	CDD	cd04479	RPA3	coord: 410..509 e-value: 6.52885E-23 score: 91.1705
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 101..248 e-value: 3.3E-13 score: 47.4
IPR013970	Replication factor A protein 3	PFAM	PF08661	Rep_fac-A_3	coord: 405..504 e-value: 4.0E-19 score: 68.9
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 82..333
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 4..52
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 409..509

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G018890	ClCG10G018890	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G018890.2-exon	ClCG10G018890.2-exon-CG_Chr10:33876407..33877141	exon
ClCG10G018890.2-exon	ClCG10G018890.2-exon-CG_Chr10:33877277..33877551	exon
ClCG10G018890.2-exon	ClCG10G018890.2-exon-CG_Chr10:33879081..33879095	exon
ClCG10G018890.2-exon	ClCG10G018890.2-exon-CG_Chr10:33879210..33879396	exon
ClCG10G018890.2-exon	ClCG10G018890.2-exon-CG_Chr10:33880174..33880429	exon
ClCG10G018890.2-exon	ClCG10G018890.2-exon-CG_Chr10:33881719..33881783	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G018890.2-cds	ClCG10G018890.2-cds-CG_Chr10:33876407..33877141	CDS
ClCG10G018890.2-cds	ClCG10G018890.2-cds-CG_Chr10:33877277..33877551	CDS
ClCG10G018890.2-cds	ClCG10G018890.2-cds-CG_Chr10:33879081..33879095	CDS
ClCG10G018890.2-cds	ClCG10G018890.2-cds-CG_Chr10:33879210..33879396	CDS
ClCG10G018890.2-cds	ClCG10G018890.2-cds-CG_Chr10:33880174..33880429	CDS
ClCG10G018890.2-cds	ClCG10G018890.2-cds-CG_Chr10:33881719..33881783	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G018890.2	ClCG10G018890.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding