ClCG10G013800.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G013800.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr10: 28087257 .. 28087602 (+)
Sequence length	252
RNA-Seq Expression	ClCG10G013800.1
Synteny	ClCG10G013800.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGCAAAAGATGTAATTTCATGGAGCTCCTTCATTGCTTATGTTCTACCAATGGCAGCACTAAATCCTTTCAATGAATTATTAATAGGAAAACCAAATTTAATTCAATCACAGTGACAGGTGCATTGCAGGCATGAGCAATTGCATCTAACTTGGAAGAGGAAAAGAGGATCCATGAACTTGTTGCCAGTAAAGGTTTGGAGTTGGATGTTTCAATTTCCACAGCTCTGATTATTTGATTAATGCAACATGAAATGCTTTTCACCTGAAGAACCCCTTGACGTGCTTGAAAAAATGCCGTGGTTACTTGGGCTGCCTTGCTAGGTGGATATTCCCCAAATGA

mRNA sequence

ATGCTGGCAAAAGATGTAATTTCATGGAGCTCCTTCATTGCTTATGTTCTACCAATGGCAGCACTAAATCCTTTCAATGAATTATTAATAGGAAAACCAAATTTAATTCAATCACAGCATGAGCAATTGCATCTAACTTGGAAGAGGAAAAGAGGATCCATGAACTTGTTGCCAGTAAAGAACCCCTTGACGTGCTTGAAAAAATGCCGTGGTTACTTGGGCTGCCTTGCTAGGTGGATATTCCCCAAATGA

Coding sequence (CDS)

ATGCTGGCAAAAGATGTAATTTCATGGAGCTCCTTCATTGCTTATGTTCTACCAATGGCAGCACTAAATCCTTTCAATGAATTATTAATAGGAAAACCAAATTTAATTCAATCACAGCATGAGCAATTGCATCTAACTTGGAAGAGGAAAAGAGGATCCATGAACTTGTTGCCAGTAAAGAACCCCTTGACGTGCTTGAAAAAATGCCGTGGTTACTTGGGCTGCCTTGCTAGGTGGATATTCCCCAAATGA

Protein sequence

MLAKDVISWSSFIAYVLPMAALNPFNELLIGKPNLIQSQHEQLHLTWKRKRGSMNLLPVKNPLTCLKKCRGYLGCLARWIFPK

Homology

The following BLAST results are available for this feature:

BLAST of ClCG10G013800.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G013800.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G013800.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G013800.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G013800	ClCG10G013800	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G013800.1-exon	ClCG10G013800.1-exon-CG_Chr10:28087257..28087372	exon
ClCG10G013800.1-exon	ClCG10G013800.1-exon-CG_Chr10:28087391..28087454	exon
ClCG10G013800.1-exon	ClCG10G013800.1-exon-CG_Chr10:28087531..28087602	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G013800.1-cds	ClCG10G013800.1-cds-CG_Chr10:28087257..28087372	CDS
ClCG10G013800.1-cds	ClCG10G013800.1-cds-CG_Chr10:28087391..28087454	CDS
ClCG10G013800.1-cds	ClCG10G013800.1-cds-CG_Chr10:28087531..28087602	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G013800.1	ClCG10G013800.1-protein	polypeptide