ClCG10G013320.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G013320.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	GATA transcription factor 12-like
Location	CG_Chr10: 27544838 .. 27545775 (-)
Sequence length	849
RNA-Seq Expression	ClCG10G013320.1
Synteny	ClCG10G013320.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGATTAACAGCGAATATGAGCAAGACGACTGTTCTAAACTTGGTGCCGAGTTTTCTTCCACTCTCGATGATGACCTCTATTCTTCACAGGCGACGACAATGGTATGTCATTTTAAAATCCATTGCTTTTCTTTGCTTTGCTTGCCTTGTTCTCATCTCACCAATGTTGAGTGTTTCATTTGATGAAACAGGAGGTTGATGTAAGCTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAACCAAAGGAAGCACCCTCCCCCTCCCACCTCCACAACTATCCACACAGCTTAACGATCCCCCTACAAAACCAACTTCACTTTCTCAGCCCGCACTCCCTTCTTCAAACTCGTCGTTCACCCACTTTCCTGCAGTCCCCGGCAAGGCCAGAAGCAAGAGAGGACGACGAGTGCCCTCCAAAACGATCATTCGCCCTCTCGTTGGTCAACAGCTCCGTCAACTAAACCTGCTGCAGAACAAACATTCCTTACAGTTAACATCCTCTACAGACCCCCTTCTGTTGCAACAGACCTATTGGTTGGCCGATAGCGAGCTCTTACTTCCACCTAAGGTTCAAGGAGGAGGAGGCGAAAGAGAGAAGATGGTAGACATGGATCAAATAGAGCCAACAGCCAAGGAGAGTTTGAAGAAGCAGCAGCAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAAGCACAGAGGACTCCACAGTGGAGAAGTGGACCATTGGGGCCCAAGACATTATGCAATGCATGTGGAGTTAGATACAAAAAGTCAGGAAGATTATTACCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTATTGCATTCCAATTCACACAAGAGAGTTATGGAGATGAGAATGATGAATGCCTCTTCTTCTACTTCATCTACCTTTCCCTCCTCTTCGTAA

mRNA sequence

ATGGCGTCGATTAACAGCGAATATGAGCAAGACGACTGTTCTAAACTTGGTGCCGAGTTTTCTTCCACTCTCGATGATGACCTCTATTCTTCACAGGCGACGACAATGGAGGTTGATGTAAGCTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAACCAAAGGAAGCACCCTCCCCCTCCCACCTCCACAACTATCCACACAGCTTAACGATCCCCCTACAAAACCAACTTCACTTTCTCAGCCCGCACTCCCTTCTTCAAACTCGTCGTTCACCCACTTTCCTGCAGTCCCCGGCAAGGCCAGAAGCAAGAGAGGACGACGAGTGCCCTCCAAAACGATCATTCGCCCTCTCGTTGGTCAACAGCTCCGTCAACTAAACCTGCTGCAGAACAAACATTCCTTACAGTTAACATCCTCTACAGACCCCCTTCTGTTGCAACAGACCTATTGGTTGGCCGATAGCGAGCTCTTACTTCCACCTAAGGTTCAAGGAGGAGGAGGCGAAAGAGAGAAGATGGTAGACATGGATCAAATAGAGCCAACAGCCAAGGAGAGTTTGAAGAAGCAGCAGCAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAAGCACAGAGGACTCCACAGTGGAGAAGTGGACCATTGGGGCCCAAGACATTATGCAATGCATGTGGAGTTAGATACAAAAAGTCAGGAAGATTATTACCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTATTGCATTCCAATTCACACAAGAGAGTTATGGAGATGAGAATGATGAATGCCTCTTCTTCTACTTCATCTACCTTTCCCTCCTCTTCGTAA

Coding sequence (CDS)

ATGGCGTCGATTAACAGCGAATATGAGCAAGACGACTGTTCTAAACTTGGTGCCGAGTTTTCTTCCACTCTCGATGATGACCTCTATTCTTCACAGGCGACGACAATGGAGGTTGATGTAAGCTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAACCAAAGGAAGCACCCTCCCCCTCCCACCTCCACAACTATCCACACAGCTTAACGATCCCCCTACAAAACCAACTTCACTTTCTCAGCCCGCACTCCCTTCTTCAAACTCGTCGTTCACCCACTTTCCTGCAGTCCCCGGCAAGGCCAGAAGCAAGAGAGGACGACGAGTGCCCTCCAAAACGATCATTCGCCCTCTCGTTGGTCAACAGCTCCGTCAACTAAACCTGCTGCAGAACAAACATTCCTTACAGTTAACATCCTCTACAGACCCCCTTCTGTTGCAACAGACCTATTGGTTGGCCGATAGCGAGCTCTTACTTCCACCTAAGGTTCAAGGAGGAGGAGGCGAAAGAGAGAAGATGGTAGACATGGATCAAATAGAGCCAACAGCCAAGGAGAGTTTGAAGAAGCAGCAGCAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAAGCACAGAGGACTCCACAGTGGAGAAGTGGACCATTGGGGCCCAAGACATTATGCAATGCATGTGGAGTTAGATACAAAAAGTCAGGAAGATTATTACCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTATTGCATTCCAATTCACACAAGAGAGTTATGGAGATGAGAATGATGAATGCCTCTTCTTCTACTTCATCTACCTTTCCCTCCTCTTCGTAA

Protein sequence

MASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGSTLPLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTIIRPLVGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPKVQGGGGEREKMVDMDQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSSTFPSSS

Homology

[Close]

BLAST of ClCG10G013320.1 vs. NCBI nr
Match: XP_038903903.1 (GATA transcription factor 12-like [Benincasa hispida])

HSP 1 Score: 482.3 bits (1240), Expect = 2.9e-132
Identity = 250/283 (88.34%), Postives = 259/283 (91.52%), Query Frame = 0


Query: 1   MASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECL-STKGST 60
           M S+N +YEQDDCSKLGAEFSSTLDD LYSSQ  TM+VDVSLEWLSAFVEECL STKGST
Sbjct: 7   MVSVNCQYEQDDCSKLGAEFSSTLDDALYSSQGMTMDVDVSLEWLSAFVEECLSSTKGST 66

Query: 61  LPLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTIIRP 120
           LPLPP QLSTQLN P TKP+SLS PA PSSNSSFTHFPAVPGKARSKR RR PSK IIRP
Sbjct: 67  LPLPPLQLSTQLNSPSTKPSSLSHPAPPSSNSSFTHFPAVPGKARSKRRRRAPSKAIIRP 126

Query: 121 LVGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPKVQGGGGEREKMVDMD 180
           LVGQ L QLNLLQNKH LQLTSS DPLLLQQTYWLADSELLLPPK +GGGGE EK +DMD
Sbjct: 127 LVGQHLHQLNLLQNKHFLQLTSSADPLLLQQTYWLADSELLLPPKARGGGGETEKTIDMD 186

Query: 181 QIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL 240
           QIE T K+S+KKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL
Sbjct: 187 QIETTVKKSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL 246

Query: 241 PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSSTFPSSS 283
           PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSST +TFPSSS
Sbjct: 247 PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTPTTFPSSS 289

[Close]

BLAST of ClCG10G013320.1 vs. NCBI nr
Match: XP_004141141.1 (GATA transcription factor 9 [Cucumis sativus] >KGN59763.1 hypothetical protein Csa_001643 [Cucumis sativus])

HSP 1 Score: 450.7 bits (1158), Expect = 9.5e-123
Identity = 240/285 (84.21%), Postives = 255/285 (89.47%), Query Frame = 0


Query: 2   ASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGSTLP 61
           AS+N + EQDDCS L AEFSST+DD LYSSQA TM+VDVSLEWLSAFVEECLSTKGSTLP
Sbjct: 8   ASVNYKCEQDDCSNLEAEFSSTIDDILYSSQAMTMDVDVSLEWLSAFVEECLSTKGSTLP 67

Query: 62  LPPP-QLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTIIRPL 121
           LPPP QLSTQLN+PPTKP+SLSQ    SSNS F HFPAVPGKARSKR RR PSK  + PL
Sbjct: 68  LPPPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFAHFPAVPGKARSKRRRRTPSKMSVLPL 127

Query: 122 VGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPKVQGGGGEREKMVDMDQ 181
           + ++LRQLNLLQNKHSLQLT+STDPLLLQQTYWLADSELLLPPK +  GGEREK VDM Q
Sbjct: 128 ISRRLRQLNLLQNKHSLQLTTSTDPLLLQQTYWLADSELLLPPKAR--GGEREKTVDMGQ 187

Query: 182 IEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLLP 241
           IE T + S+KKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLLP
Sbjct: 188 IETTVENSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLLP 247

Query: 242 EYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTS---STFPSSS 283
           EYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTS   +TFPSSS
Sbjct: 248 EYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTSTTTFPSSS 290

[Close]

BLAST of ClCG10G013320.1 vs. NCBI nr
Match: XP_008465326.1 (PREDICTED: GATA transcription factor 12-like [Cucumis melo] >KAA0051278.1 GATA transcription factor 12-like [Cucumis melo var. makuwa] >TYK29983.1 GATA transcription factor 12-like [Cucumis melo var. makuwa])

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117
Identity = 237/286 (82.87%), Postives = 254/286 (88.81%), Query Frame = 0


Query: 2   ASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGSTLP 61
           AS+N + EQDDCS L AEFSST+DD LYSSQA TM+VDVSLEWLSAFVEECLSTKGST P
Sbjct: 8   ASVNYKCEQDDCSNLEAEFSSTVDDILYSSQAMTMDVDVSLEWLSAFVEECLSTKGSTHP 67

Query: 62  LPPP-QLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPS-KTIIRP 121
           LPPP QLSTQLN+PPTKP+SLSQ    SSNS FTHFPAVPGKARSKR RR PS K  + P
Sbjct: 68  LPPPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFTHFPAVPGKARSKRRRRTPSNKMSVLP 127

Query: 122 LVGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPKVQGGGGEREKMVDMD 181
           L+ ++LRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPP+ +  GGEREK VDM 
Sbjct: 128 LISRRLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPEAR--GGEREKTVDMG 187

Query: 182 QIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL 241
           QI+ T ++S+KK QQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL
Sbjct: 188 QIKTTVEKSVKK-QQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL 247

Query: 242 PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSS---TFPSSS 283
           PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTS+   T PSSS
Sbjct: 248 PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTPTPTCPSSS 290

[Close]

BLAST of ClCG10G013320.1 vs. NCBI nr
Match: XP_023540763.1 (GATA transcription factor 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.7 bits (1062), Expect = 1.3e-111
Identity = 224/284 (78.87%), Postives = 242/284 (85.21%), Query Frame = 0


Query: 1   MASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGSTL 60
           M S+NSEYEQDDCSKL +E SSTLDDDL S Q TTMEVDV+LEWLSAFVEECLS KGS+L
Sbjct: 7   MVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSL 66

Query: 61  PLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTIIRPL 120
           PLPPPQLST LN+PP  P SLS P   SS+S F+HF AVP KARSKR R+ P+ T IRPL
Sbjct: 67  PLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKR-RQAPANTSIRPL 126

Query: 121 VGQ-QLRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPKVQGGGG-EREKMVD 180
           +GQ  L QLNLL +K SLQLTSS+ D LLLQQTYWLADSELLLP K QGGGG EREK VD
Sbjct: 127 IGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGEEREKKVD 186

Query: 181 MDQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGR 240
           MDQ + T K+SL  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNACGVRYKKSGR
Sbjct: 187 MDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGR 246

Query: 241 LLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSSTFPSS 282
           L+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTS+ F SS
Sbjct: 247 LVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 289

[Close]

BLAST of ClCG10G013320.1 vs. NCBI nr
Match: XP_022972249.1 (GATA transcription factor 12-like [Cucurbita maxima])

HSP 1 Score: 407.1 bits (1045), Expect = 1.2e-109
Identity = 220/283 (77.74%), Postives = 239/283 (84.45%), Query Frame = 0


Query: 1   MASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGSTL 60
           M S+NSEYEQDDCSKL +E SSTLDDDL S Q TTMEVD +LEWLSAFVEECLS KGS+L
Sbjct: 7   MVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDGNLEWLSAFVEECLSAKGSSL 66

Query: 61  PLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTIIRPL 120
           PLPPPQLST LN+PP  P SLS P   SS+S F+HF AVP KARSKR R+ P+ T I PL
Sbjct: 67  PLPPPQLSTHLNNPPPPPNSLSHPIPSSSDSPFSHFSAVPSKARSKR-RQAPANTSICPL 126

Query: 121 VGQ-QLRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPKVQGGGGEREKMVDM 180
           +GQ  L QLNLL NK SLQLTSS+ D LLLQQTYWLADSELLLP K +GGG EREK V+M
Sbjct: 127 IGQHHLDQLNLLPNKQSLQLTSSSADILLLQQTYWLADSELLLPHKARGGGEEREKKVEM 186

Query: 181 DQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRL 240
           DQ + T K+SL  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNACGVRYKKSGRL
Sbjct: 187 DQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRL 246

Query: 241 LPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSSTFPSS 282
           +PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTS+ F SS
Sbjct: 247 VPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 288

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy Swiss-Prot
Match: O82632 (GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.2e-28
Identity = 93/231 (40.26%), Postives = 112/231 (48.48%), Query Frame = 0


Query: 42  LEWLSAFVEECLSTKGSTLPLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFP---- 101
           LEWLS FVEE  + +          L + L +P T  ++L+    P              
Sbjct: 80  LEWLSNFVEESFAGEDQ----DKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQFIDIDES 139

Query: 102 --AVPGKARSKRGRRVPSKTIIRPLVGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLA 161
             AVP KARSKR R   S    R L                                 LA
Sbjct: 140 NVAVPAKARSKRSRSAASTWASRLLS--------------------------------LA 199

Query: 162 DSELLLPPKVQGGGGEREKMVDMDQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWR 221
           DS+   P K Q    E++   DMD       ES         G GRRC HC  ++TPQWR
Sbjct: 200 DSDETNPKKKQRRVKEQDFAGDMD---VDCGES---------GGGRRCLHCATEKTPQWR 259

Query: 222 SGPLGPKTLCNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMR 267
           +GP+GPKTLCNACGVRY KSGRL+PEYRPA+SPTFV   HSNSH++VME+R
Sbjct: 260 TGPMGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVMARHSNSHRKVMELR 261

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy Swiss-Prot
Match: P69781 (GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-26
Identity = 96/244 (39.34%), Postives = 118/244 (48.36%), Query Frame = 0


Query: 42  LEWLSAFVEECLSTKGSTLPLPPPQLSTQLNDPPTKPTSLSQPALPSSNSS-FTHFPAVP 101
           LEWLS  V+E LS +     +   +L +     P   +    P  P+S+S  FT   +VP
Sbjct: 82  LEWLSNIVDESLSPE----DVHKLELISGFKSRPDPKSDTGSPENPNSSSPIFTTDVSVP 141

Query: 102 GKARSKRGRRVPSKTIIRPLVGQQL------RQLNLLQNKHSLQLTSSTDPLLLQQTYWL 161
            KARSKR R        R L+ +         +  L   +H   L+  T P LL      
Sbjct: 142 AKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSSQQH---LSPPTSPPLLMAP--- 201

Query: 162 ADSELLLPPKVQGGGGEREKMVDMDQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQW 221
                 L  K    GG R K    D   P          + G    RRC HC   +TPQW
Sbjct: 202 ------LGKKQAVDGGHRRK---KDVSSP----------ESGGAEERRCLHCATDKTPQW 261

Query: 222 RSGPLGPKTLCNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSST 279
           R+GP+GPKTLCNACGVRY KSGRL+PEYRPA SPTFV   HSNSH++VME+R     S  
Sbjct: 262 RTGPMGPKTLCNACGVRY-KSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQKEMSRA 295

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy Swiss-Prot
Match: Q8LAU9 (GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 8.6e-26
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 200 GRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSH 259
           GR+C HC A++TPQWR+GP GPKTLCNACGVRY KSGRL+PEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 260 KRVMEMR 267
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy Swiss-Prot
Match: O49741 (GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 59/104 (56.73%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 180 QIEPTAKESLKKQQQQGAGSG-----------------RRCSHCQAQRTPQWRSGPLGPK 239
           Q+   AK   KK+Q  G G G                 RRC+HC +++TPQWR+GPLGPK
Sbjct: 141 QLHSAAKFKPKKEQSGGGGGGGGRHQSSSSETTEGGGMRRCTHCASEKTPQWRTGPLGPK 200

Query: 240 TLCNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMR 267
           TLCNACGVR+ KSGRL+PEYRPA+SPTFV   HSNSH++VME+R
Sbjct: 201 TLCNACGVRF-KSGRLVPEYRPASSPTFVLTQHSNSHRKVMELR 243

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy Swiss-Prot
Match: Q9FH57 (GATA transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=GATA5 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.6e-25
Identity = 96/281 (34.16%), Postives = 134/281 (47.69%), Query Frame = 0


Query: 1   MASINSEYEQDDCSKL--GAEFSSTLDDDLYSSQATTMEVD--VSLEWLSAFVEECLSTK 60
           M  ++SE   DD   L   ++FS   D     +   ++  D   +LEWLS FVE+  +  
Sbjct: 68  MVRVSSEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEWLSHFVEDSFTEY 127

Query: 61  GSTLPLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTI 120
                   P L+    + P   T   +  + +          VP KARSKR R       
Sbjct: 128 SG------PNLTGTPTEKPAWLTGDRKHPVTAVTEETCFKSPVPAKARSKRNRN------ 187

Query: 121 IRPLVGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPKVQGGGGEREKMV 180
                G ++  L    +       S++       + W + +ELL P          E+  
Sbjct: 188 -----GLKVWSLGSSSSSGPSSSGSTSSSSSGPSSPWFSGAELLEPVVTS------ERPP 247

Query: 181 DMDQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSG 240
              + +  + ES+   + Q     R+CSHC  Q+TPQWR+GP+G KTLCNACGVRY KSG
Sbjct: 248 FPKKHKKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRY-KSG 307

Query: 241 RLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSST 278
           RLLPEYRPA SPTF S LHSN H++V+EMR     +S + T
Sbjct: 308 RLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKEPTSDNET 324

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy TrEMBL
Match: A0A0A0LD86 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G843820 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 4.6e-123
Identity = 240/285 (84.21%), Postives = 255/285 (89.47%), Query Frame = 0


Query: 2   ASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGSTLP 61
           AS+N + EQDDCS L AEFSST+DD LYSSQA TM+VDVSLEWLSAFVEECLSTKGSTLP
Sbjct: 8   ASVNYKCEQDDCSNLEAEFSSTIDDILYSSQAMTMDVDVSLEWLSAFVEECLSTKGSTLP 67

Query: 62  LPPP-QLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTIIRPL 121
           LPPP QLSTQLN+PPTKP+SLSQ    SSNS F HFPAVPGKARSKR RR PSK  + PL
Sbjct: 68  LPPPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFAHFPAVPGKARSKRRRRTPSKMSVLPL 127

Query: 122 VGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPKVQGGGGEREKMVDMDQ 181
           + ++LRQLNLLQNKHSLQLT+STDPLLLQQTYWLADSELLLPPK +  GGEREK VDM Q
Sbjct: 128 ISRRLRQLNLLQNKHSLQLTTSTDPLLLQQTYWLADSELLLPPKAR--GGEREKTVDMGQ 187

Query: 182 IEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLLP 241
           IE T + S+KKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLLP
Sbjct: 188 IETTVENSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLLP 247

Query: 242 EYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTS---STFPSSS 283
           EYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTS   +TFPSSS
Sbjct: 248 EYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTSTTTFPSSS 290

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy TrEMBL
Match: A0A5A7U7L1 (GATA transcription factor 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00120 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.8e-118
Identity = 237/286 (82.87%), Postives = 254/286 (88.81%), Query Frame = 0


Query: 2   ASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGSTLP 61
           AS+N + EQDDCS L AEFSST+DD LYSSQA TM+VDVSLEWLSAFVEECLSTKGST P
Sbjct: 8   ASVNYKCEQDDCSNLEAEFSSTVDDILYSSQAMTMDVDVSLEWLSAFVEECLSTKGSTHP 67

Query: 62  LPPP-QLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPS-KTIIRP 121
           LPPP QLSTQLN+PPTKP+SLSQ    SSNS FTHFPAVPGKARSKR RR PS K  + P
Sbjct: 68  LPPPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFTHFPAVPGKARSKRRRRTPSNKMSVLP 127

Query: 122 LVGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPKVQGGGGEREKMVDMD 181
           L+ ++LRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPP+ +  GGEREK VDM 
Sbjct: 128 LISRRLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPEAR--GGEREKTVDMG 187

Query: 182 QIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL 241
           QI+ T ++S+KK QQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL
Sbjct: 188 QIKTTVEKSVKK-QQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL 247

Query: 242 PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSS---TFPSSS 283
           PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTS+   T PSSS
Sbjct: 248 PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTPTPTCPSSS 290

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy TrEMBL
Match: A0A1S3CNM0 (GATA transcription factor 12-like OS=Cucumis melo OX=3656 GN=LOC103502974 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.8e-118
Identity = 237/286 (82.87%), Postives = 254/286 (88.81%), Query Frame = 0


Query: 2   ASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGSTLP 61
           AS+N + EQDDCS L AEFSST+DD LYSSQA TM+VDVSLEWLSAFVEECLSTKGST P
Sbjct: 8   ASVNYKCEQDDCSNLEAEFSSTVDDILYSSQAMTMDVDVSLEWLSAFVEECLSTKGSTHP 67

Query: 62  LPPP-QLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPS-KTIIRP 121
           LPPP QLSTQLN+PPTKP+SLSQ    SSNS FTHFPAVPGKARSKR RR PS K  + P
Sbjct: 68  LPPPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFTHFPAVPGKARSKRRRRTPSNKMSVLP 127

Query: 122 LVGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPKVQGGGGEREKMVDMD 181
           L+ ++LRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPP+ +  GGEREK VDM 
Sbjct: 128 LISRRLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPEAR--GGEREKTVDMG 187

Query: 182 QIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL 241
           QI+ T ++S+KK QQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL
Sbjct: 188 QIKTTVEKSVKK-QQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLL 247

Query: 242 PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSS---TFPSSS 283
           PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTS+   T PSSS
Sbjct: 248 PEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTPTPTCPSSS 290

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy TrEMBL
Match: A0A6J1IAY5 (GATA transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=LOC111470835 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 5.8e-110
Identity = 220/283 (77.74%), Postives = 239/283 (84.45%), Query Frame = 0


Query: 1   MASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGSTL 60
           M S+NSEYEQDDCSKL +E SSTLDDDL S Q TTMEVD +LEWLSAFVEECLS KGS+L
Sbjct: 7   MVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDGNLEWLSAFVEECLSAKGSSL 66

Query: 61  PLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTIIRPL 120
           PLPPPQLST LN+PP  P SLS P   SS+S F+HF AVP KARSKR R+ P+ T I PL
Sbjct: 67  PLPPPQLSTHLNNPPPPPNSLSHPIPSSSDSPFSHFSAVPSKARSKR-RQAPANTSICPL 126

Query: 121 VGQ-QLRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPKVQGGGGEREKMVDM 180
           +GQ  L QLNLL NK SLQLTSS+ D LLLQQTYWLADSELLLP K +GGG EREK V+M
Sbjct: 127 IGQHHLDQLNLLPNKQSLQLTSSSADILLLQQTYWLADSELLLPHKARGGGEEREKKVEM 186

Query: 181 DQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRL 240
           DQ + T K+SL  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNACGVRYKKSGRL
Sbjct: 187 DQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRL 246

Query: 241 LPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSSTFPSS 282
           +PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTS+ F SS
Sbjct: 247 VPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 288

[Close]

BLAST of ClCG10G013320.1 vs. ExPASy TrEMBL
Match: A0A6J1EXX1 (GATA transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111439211 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 4.2e-108
Identity = 221/286 (77.27%), Postives = 241/286 (84.27%), Query Frame = 0


Query: 1   MASINSEYEQDDCSKLGAEFSSTLDDDLYSSQATTMEVDVSLEWLSAFVEECLSTKGST- 60
           M S+NSE EQDDCSKL +E SSTLDDDL S Q TTMEVDV+LEWLSAFVEECLS KGS+ 
Sbjct: 7   MVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSL 66

Query: 61  -LPLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTIIR 120
            LPLPPPQLST LN+PP  P SLS+P   SS+S F+HF AVP KARSKR R+ P+ T IR
Sbjct: 67  PLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKR-RQAPANTSIR 126

Query: 121 PLVGQ-QLRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPKVQGGG-GEREKM 180
           PL+GQ  L QLNLL +K SLQLTSS+ D LLLQQTYWLADSELLLP K +GGG  EREK 
Sbjct: 127 PLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGEEEREKK 186

Query: 181 VDMDQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKS 240
           VDMDQ + T K+SL  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNACGVRYKKS
Sbjct: 187 VDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKS 246

Query: 241 GRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSSTFPSS 282
           GRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTS+ F SS
Sbjct: 247 GRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 291

[Close]

BLAST of ClCG10G013320.1 vs. TAIR 10
Match: AT4G32890.1 (GATA transcription factor 9 )

HSP 1 Score: 125.6 bits (314), Expect = 6.5e-29
Identity = 93/231 (40.26%), Postives = 112/231 (48.48%), Query Frame = 0


Query: 42  LEWLSAFVEECLSTKGSTLPLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFP---- 101
           LEWLS FVEE  + +          L + L +P T  ++L+    P              
Sbjct: 80  LEWLSNFVEESFAGEDQ----DKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQFIDIDES 139

Query: 102 --AVPGKARSKRGRRVPSKTIIRPLVGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLA 161
             AVP KARSKR R   S    R L                                 LA
Sbjct: 140 NVAVPAKARSKRSRSAASTWASRLLS--------------------------------LA 199

Query: 162 DSELLLPPKVQGGGGEREKMVDMDQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWR 221
           DS+   P K Q    E++   DMD       ES         G GRRC HC  ++TPQWR
Sbjct: 200 DSDETNPKKKQRRVKEQDFAGDMD---VDCGES---------GGGRRCLHCATEKTPQWR 259

Query: 222 SGPLGPKTLCNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMR 267
           +GP+GPKTLCNACGVRY KSGRL+PEYRPA+SPTFV   HSNSH++VME+R
Sbjct: 260 TGPMGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVMARHSNSHRKVMELR 261

[Close]

BLAST of ClCG10G013320.1 vs. TAIR 10
Match: AT5G25830.1 (GATA transcription factor 12 )

HSP 1 Score: 122.1 bits (305), Expect = 7.2e-28
Identity = 96/244 (39.34%), Postives = 118/244 (48.36%), Query Frame = 0


Query: 42  LEWLSAFVEECLSTKGSTLPLPPPQLSTQLNDPPTKPTSLSQPALPSSNSS-FTHFPAVP 101
           LEWLS  V+E LS +     +   +L +     P   +    P  P+S+S  FT   +VP
Sbjct: 82  LEWLSNIVDESLSPE----DVHKLELISGFKSRPDPKSDTGSPENPNSSSPIFTTDVSVP 141

Query: 102 GKARSKRGRRVPSKTIIRPLVGQQL------RQLNLLQNKHSLQLTSSTDPLLLQQTYWL 161
            KARSKR R        R L+ +         +  L   +H   L+  T P LL      
Sbjct: 142 AKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSSQQH---LSPPTSPPLLMAP--- 201

Query: 162 ADSELLLPPKVQGGGGEREKMVDMDQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQW 221
                 L  K    GG R K    D   P          + G    RRC HC   +TPQW
Sbjct: 202 ------LGKKQAVDGGHRRK---KDVSSP----------ESGGAEERRCLHCATDKTPQW 261

Query: 222 RSGPLGPKTLCNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSST 279
           R+GP+GPKTLCNACGVRY KSGRL+PEYRPA SPTFV   HSNSH++VME+R     S  
Sbjct: 262 RTGPMGPKTLCNACGVRY-KSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQKEMSRA 295

[Close]

BLAST of ClCG10G013320.1 vs. TAIR 10
Match: AT3G24050.1 (GATA transcription factor 1 )

HSP 1 Score: 119.0 bits (297), Expect = 6.1e-27
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 200 GRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSH 259
           GR+C HC A++TPQWR+GP GPKTLCNACGVRY KSGRL+PEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 260 KRVMEMR 267
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]

BLAST of ClCG10G013320.1 vs. TAIR 10
Match: AT2G45050.1 (GATA transcription factor 2 )

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-26
Identity = 59/104 (56.73%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 180 QIEPTAKESLKKQQQQGAGSG-----------------RRCSHCQAQRTPQWRSGPLGPK 239
           Q+   AK   KK+Q  G G G                 RRC+HC +++TPQWR+GPLGPK
Sbjct: 141 QLHSAAKFKPKKEQSGGGGGGGGRHQSSSSETTEGGGMRRCTHCASEKTPQWRTGPLGPK 200

Query: 240 TLCNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMR 267
           TLCNACGVR+ KSGRL+PEYRPA+SPTFV   HSNSH++VME+R
Sbjct: 201 TLCNACGVRF-KSGRLVPEYRPASSPTFVLTQHSNSHRKVMELR 243

[Close]

BLAST of ClCG10G013320.1 vs. TAIR 10
Match: AT5G66320.1 (GATA transcription factor 5 )

HSP 1 Score: 116.3 bits (290), Expect = 3.9e-26
Identity = 96/281 (34.16%), Postives = 134/281 (47.69%), Query Frame = 0


Query: 1   MASINSEYEQDDCSKL--GAEFSSTLDDDLYSSQATTMEVD--VSLEWLSAFVEECLSTK 60
           M  ++SE   DD   L   ++FS   D     +   ++  D   +LEWLS FVE+  +  
Sbjct: 68  MVRVSSEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEWLSHFVEDSFTEY 127

Query: 61  GSTLPLPPPQLSTQLNDPPTKPTSLSQPALPSSNSSFTHFPAVPGKARSKRGRRVPSKTI 120
                   P L+    + P   T   +  + +          VP KARSKR R       
Sbjct: 128 SG------PNLTGTPTEKPAWLTGDRKHPVTAVTEETCFKSPVPAKARSKRNRN------ 187

Query: 121 IRPLVGQQLRQLNLLQNKHSLQLTSSTDPLLLQQTYWLADSELLLPPKVQGGGGEREKMV 180
                G ++  L    +       S++       + W + +ELL P          E+  
Sbjct: 188 -----GLKVWSLGSSSSSGPSSSGSTSSSSSGPSSPWFSGAELLEPVVTS------ERPP 247

Query: 181 DMDQIEPTAKESLKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSG 240
              + +  + ES+   + Q     R+CSHC  Q+TPQWR+GP+G KTLCNACGVRY KSG
Sbjct: 248 FPKKHKKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRY-KSG 307

Query: 241 RLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSST 278
           RLLPEYRPA SPTF S LHSN H++V+EMR     +S + T
Sbjct: 308 RLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKEPTSDNET 324

The following BLAST results are available for this feature:

BLAST of ClCG10G013320.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903903.1	2.9e-132	88.34	GATA transcription factor 12-like [Benincasa hispida]	[more]
XP_004141141.1	9.5e-123	84.21	GATA transcription factor 9 [Cucumis sativus] >KGN59763.1 hypothetical protein C...	[more]
XP_008465326.1	1.2e-117	82.87	PREDICTED: GATA transcription factor 12-like [Cucumis melo] >KAA0051278.1 GATA t...	[more]
XP_023540763.1	1.3e-111	78.87	GATA transcription factor 12-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972249.1	1.2e-109	77.74	GATA transcription factor 12-like [Cucurbita maxima]	[more]

BLAST of ClCG10G013320.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82632	9.2e-28	40.26	GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1	[more]
P69781	1.0e-26	39.34	GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1	[more]
Q8LAU9	8.6e-26	76.12	GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2	[more]
O49741	1.5e-25	56.73	GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1	[more]
Q9FH57	5.6e-25	34.16	GATA transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=GATA5 PE=2 SV=1	[more]

BLAST of ClCG10G013320.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD86	4.6e-123	84.21	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G843820 P...	[more]
A0A5A7U7L1	5.8e-118	82.87	GATA transcription factor 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CNM0	5.8e-118	82.87	GATA transcription factor 12-like OS=Cucumis melo OX=3656 GN=LOC103502974 PE=4 S...	[more]
A0A6J1IAY5	5.8e-110	77.74	GATA transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=LOC111470835 PE...	[more]
A0A6J1EXX1	4.2e-108	77.27	GATA transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111439211 ...	[more]

BLAST of ClCG10G013320.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32890.1	6.5e-29	40.26	GATA transcription factor 9	[more]
AT5G25830.1	7.2e-28	39.34	GATA transcription factor 12	[more]
AT3G24050.1	6.1e-27	76.12	GATA transcription factor 1	[more]
AT2G45050.1	1.0e-26	56.73	GATA transcription factor 2	[more]
AT5G66320.1	3.9e-26	34.16	GATA transcription factor 5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 197..248 e-value: 1.0E-17 score: 74.9
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 203..237 e-value: 3.5E-16 score: 58.5
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 203..228
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 197..257 score: 13.098789
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 202..250 e-value: 1.21844E-14 score: 65.0866
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 198..273 e-value: 8.3E-17 score: 63.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..96
None	No IPR available	PANTHER	PTHR45658:SF85	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 15..273
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 15..273
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 199..262

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G013320	ClCG10G013320	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G013320.1-exon	ClCG10G013320.1-exon-CG_Chr10:27544838..27545578	exon
ClCG10G013320.1-exon	ClCG10G013320.1-exon-CG_Chr10:27545668..27545775	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G013320.1-cds	ClCG10G013320.1-cds-CG_Chr10:27544838..27545578	CDS
ClCG10G013320.1-cds	ClCG10G013320.1-cds-CG_Chr10:27545668..27545775	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G013320.1	ClCG10G013320.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0030154	cell differentiation
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding