ClCG10G012870.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G012870.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Chaperone protein dnaJ 8
Location	CG_Chr10: 26924054 .. 26925764 (+)
Sequence length	943
RNA-Seq Expression	ClCG10G012870.1
Synteny	ClCG10G012870.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTCCCCCCTTTCATCTCTCACTCTTCTTTCTTCCATTGATTTTTCTTCTCGCTTCTTAAACCCTCAACACTTTCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAATGGCTTCCGTTGCTACTTCTGGATTCATTGCTCGTAGTGGTTCTTCCTCTTCTTCGTCGTGGATTCGCCATAGGAATCGCCCGAAGAAGGATCGGAGTTCTACGAGTCAACTTAGGGTTTCTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTCATTGATCCTTATCGAACTCTTCGGATTCAACCTGGCGCCTCTGAATCTGAGGTCAAAAAAGCCTTCCGACATCTCGCTCTTCAGGTTCCTTTCCCTCTTTCGATTTCTCTATCTCTGTCTTCTCTTTTCTTCTCAGAATTTGGTTTATCTTACTCTTCCGATTTCGTCGATTTTTCAGTATCATCCTGACGTTTGTAGAGGAAGTAATTGTGGCGTGCAGTTTCATCAAATCAATGAAGCTTACGATGTACGTGATCATACTCCCTTTTTTAAAAAAAATTATTTACTTAAATTAGGACCAACTATTGGAATGAGGAATCGTTTTTTTTTTTCTTCCTTAAAATAATAATAATTGAGCAGCTATTACGATAACTAATTAAATATGTATTTAGAGGAGGAATATTTTGAATTTCACTATATATAGCGTGTGAAATTGAGTGTTTGGTTAGGTTTATGTCGGTTTCACAGAGTTTTGATCACTCTAACAGTGAATTTCCTATACCTATTTGTCGTATATCATGTTAGCTAAAATTACACAAATATATATTTTTGGACTTTGGCTTTTGCTTTCATTGGGACCCCTGAATGATCCAAAACTGTCAAAAGACAATTCAACCCATTTGGTCCTCTTATTGGGAGAAATTTAGAATTTAATCCTTTTGGTTCTTAAATTACTGATTGATGATTGATCCCAAAAGCTAACGGATCTCACTTACCTACTTTGATACCATCTTAAAATATGGATGGACCCAAAAGTTTACCTCTTTGAACCACCTAGGTGAGAAATTCATTGAATCATAGTTTATTTTTTGTGATAATTTTTATCAAACTATCCCAACTTTTCCCAAATTGTAGGGATTATATTTGTAATTTAATCAAATTTTACTGGTAACAAATAACAGCTACCAGTTATGAAGATAGTTCGGTATTTGCTAATGAGGTAACCGTTGTTTGGTGAAACAGATTGTGATGAATAACTTAAGAGGAATATCAACACCAATAGAGACATATGAGACATATGAGGAAGCGGTGGATGAACCGATGAGAGGAATGGAGGATCCAGATTGGGATTTATGGGAAGAATGGATGGGATGGGAAGGAGCAGGAATTCGTGATTATTCTTCTCATATCAATCCATACATTTAAAACCAAAAATTCAAATTAGGTTATGATTTGTTAATAGAATTGGTTCTTAATCTATCAACATCAACCAATGGTTGTGGTGGGTTTGGTTTGTTGTATATATAAATGGGAAAAGAGGGGAAATTGAAAATTGGTATTCATTAATGTTTACCCTTTTTTTCAAGTGTTATTTGTACATATGGTCAAGACAGAGCCTTCGGCTTTTAATAATATGAAAAGGCTTTCAAGATGCCCCATCGAAGTTGTGGGACATTTGTGTTTTTATCTTCATCCCTTATCTTTTTCTTT

mRNA sequence

AACTCCCCCCTTTCATCTCTCACTCTTCTTTCTTCCATTGATTTTTCTTCTCGCTTCTTAAACCCTCAACACTTTCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAATGGCTTCCGTTGCTACTTCTGGATTCATTGCTCGTAGTGGTTCTTCCTCTTCTTCGTCGTGGATTCGCCATAGGAATCGCCCGAAGAAGGATCGGAGTTCTACGAGTCAACTTAGGGTTTCTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTCATTGATCCTTATCGAACTCTTCGGATTCAACCTGGCGCCTCTGAATCTGAGGTCAAAAAAGCCTTCCGACATCTCGCTCTTCAGAATTTGGTTTATCTTACTCTTCCGATTTCGTCGATTTTTCAGTATCATCCTGACGTTTGTAGAGGAAGTAATTGTGGCGTGCAGTTTCATCAAATCAATGAAGCTTACGATATTGTGATGAATAACTTAAGAGGAATATCAACACCAATAGAGACATATGAGACATATGAGGAAGCGGTGGATGAACCGATGAGAGGAATGGAGGATCCAGATTGGGATTTATGGGAAGAATGGATGGGATGGGAAGGAGCAGGAATTCGTGATTATTCTTCTCATATCAATCCATACATTTAAAACCAAAAATTCAAATTAGGTTATGATTTGTTAATAGAATTGGTTCTTAATCTATCAACATCAACCAATGGTTGTGGTGGGTTTGGTTTGTTGTATATATAAATGGGAAAAGAGGGGAAATTGAAAATTGGTATTCATTAATGTTTACCCTTTTTTTCAAGTGTTATTTGTACATATGGTCAAGACAGAGCCTTCGGCTTTTAATAATATGAAAAGGCTTTCAAGATGCCCCATCGAAGTTGTGGGACATTTGTGTTTTTATCTTCATCCCTTATCTTTTTCTTT

Coding sequence (CDS)

ATGGCTTCCGTTGCTACTTCTGGATTCATTGCTCGTAGTGGTTCTTCCTCTTCTTCGTCGTGGATTCGCCATAGGAATCGCCCGAAGAAGGATCGGAGTTCTACGAGTCAACTTAGGGTTTCTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTCATTGATCCTTATCGAACTCTTCGGATTCAACCTGGCGCCTCTGAATCTGAGGTCAAAAAAGCCTTCCGACATCTCGCTCTTCAGAATTTGGTTTATCTTACTCTTCCGATTTCGTCGATTTTTCAGTATCATCCTGACGTTTGTAGAGGAAGTAATTGTGGCGTGCAGTTTCATCAAATCAATGAAGCTTACGATATTGTGATGAATAACTTAAGAGGAATATCAACACCAATAGAGACATATGAGACATATGAGGAAGCGGTGGATGAACCGATGAGAGGAATGGAGGATCCAGATTGGGATTTATGGGAAGAATGGATGGGATGGGAAGGAGCAGGAATTCGTGATTATTCTTCTCATATCAATCCATACATTTAA

Protein sequence

MASVATSGFIARSGSSSSSSWIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYRTLRIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI

Homology

[Close]

BLAST of ClCG10G012870.1 vs. NCBI nr
Match: XP_038906426.1 (chaperone protein dnaJ 8, chloroplastic [Benincasa hispida])

HSP 1 Score: 311.2 bits (796), Expect = 5.6e-81
Identity = 156/177 (88.14%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MASVATSGFIARSGSSSSSSWIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYRTLR 60
           MASVAT+GFIARSGSSSSSSWIRHRNRPKKD+SST+QLRVSCSSSSSS SSV+DPYRTLR
Sbjct: 1   MASVATAGFIARSGSSSSSSWIRHRNRPKKDQSSTNQLRVSCSSSSSSPSSVVDPYRTLR 60

Query: 61  IQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIVM 120
           IQPGASESEVKKAFRHLAL              QYHPDVCRGSNCGVQFHQINEAYDIVM
Sbjct: 61  IQPGASESEVKKAFRHLAL--------------QYHPDVCRGSNCGVQFHQINEAYDIVM 120

Query: 121 NNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           NNLRGISTPIETYETY+E VDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 NNLRGISTPIETYETYDEGVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 163

[Close]

BLAST of ClCG10G012870.1 vs. NCBI nr
Match: XP_008465135.1 (PREDICTED: chaperone protein dnaJ 8, chloroplastic [Cucumis melo] >TYK27005.1 chaperone protein dnaJ 8 [Cucumis melo var. makuwa])

HSP 1 Score: 273.5 bits (698), Expect = 1.3e-69
Identity = 145/179 (81.01%), Postives = 153/179 (85.47%), Query Frame = 0


Query: 1   MASVATSGFIAR-SGSSSSSSWIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYRTL 60
           MASVAT+GFIAR S SSSSSS IR+ NRPKK+R+S++QLRVSC    SSSSSV DPYRTL
Sbjct: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSC----SSSSSVADPYRTL 60

Query: 61  RIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIV 120
           RIQPGASESEVKKAFRHLAL              QYHPDVCRGSNCGVQFHQINEAYDIV
Sbjct: 61  RIQPGASESEVKKAFRHLAL--------------QYHPDVCRGSNCGVQFHQINEAYDIV 120

Query: 121 MNNLRGISTPIETYET-YEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           MNNLRGISTPIETYET Y+E +DEPMRGM DPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 MNNLRGISTPIETYETIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of ClCG10G012870.1 vs. NCBI nr
Match: XP_022983187.1 (chaperone protein dnaJ 8, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 261.5 bits (667), Expect = 5.1e-66
Identity = 136/178 (76.40%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 1   MASVATSGF-IARSGSSSSSSWIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYRTL 60
           MASVAT+G  IAR+GSSSSS WIRHRNR  KDRSS +++RV+C      SSS++DPY+TL
Sbjct: 1   MASVATAGISIARTGSSSSSFWIRHRNRSNKDRSSRNRVRVTC------SSSLLDPYQTL 60

Query: 61  RIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIV 120
           RIQPGASESEVKKAFR LAL              QYHPDVCRGSNCGVQFHQINEAYDIV
Sbjct: 61  RIQPGASESEVKKAFRRLAL--------------QYHPDVCRGSNCGVQFHQINEAYDIV 120

Query: 121 MNNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           MNNLRGISTPIET E+ EE VDE MRGMEDPDW+LWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 MNNLRGISTPIETCESCEEGVDEAMRGMEDPDWELWEEWMGWEGAGIRDYSSHINPYI 158

[Close]

BLAST of ClCG10G012870.1 vs. NCBI nr
Match: XP_022934104.1 (chaperone protein dnaJ 8, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 257.7 bits (657), Expect = 7.4e-65
Identity = 136/180 (75.56%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 1   MASVATSGF-IARSGSSSSSS--WIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYR 60
           MASVAT+G  IAR+GSSSSSS  WIRHRNR  KDRSS +++RV+C      SSS++DPY+
Sbjct: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTC------SSSLLDPYQ 60

Query: 61  TLRIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYD 120
           TLRIQPGASESEVKKAFR LAL              QYHPDVCRGSNCGVQFHQINEAYD
Sbjct: 61  TLRIQPGASESEVKKAFRRLAL--------------QYHPDVCRGSNCGVQFHQINEAYD 120

Query: 121 IVMNNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           IVMNNLRGISTPIET E+ EE VDE MRGM+DPDW+LWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 IVMNNLRGISTPIETRESCEEGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 160

[Close]

BLAST of ClCG10G012870.1 vs. NCBI nr
Match: XP_023526464.1 (chaperone protein dnaJ 8, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6581620.1 Chaperone protein dnaJ 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018119.1 Chaperone protein dnaJ 8, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.7 bits (657), Expect = 7.4e-65
Identity = 136/180 (75.56%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 1   MASVATSGF-IARSGSSSSSS--WIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYR 60
           MASVAT+G  IAR+GSSSSSS  WIRHRNR  KDRSS +++RV+C      SSS++DPY+
Sbjct: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTC------SSSLLDPYQ 60

Query: 61  TLRIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYD 120
           TLRIQPGASESEVKKAFR LAL              QYHPDVCRGSNCGVQFHQINEAYD
Sbjct: 61  TLRIQPGASESEVKKAFRRLAL--------------QYHPDVCRGSNCGVQFHQINEAYD 120

Query: 121 IVMNNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           IVMNNLRGISTPIET E+ EE VDE MRGM+DPDW+LWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 IVMNNLRGISTPIETRESCEEGVDEAMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 160

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy Swiss-Prot
Match: Q9SAG8 (Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-39
Identity = 91/176 (51.70%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 3   SVATSGFIARSGS--SSSSSWIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYRTLR 62
           ++  +GF    GS  SSSSS  R +N  +K+    ++ +V C    SSSSSV+DPY+TL+
Sbjct: 6   TIGGNGFSGLPGSSFSSSSSSFRLKNSRRKNTKMLNRSKVVC----SSSSSVMDPYKTLK 65

Query: 63  IQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIVM 122
           I+P +SE EVKKAFR LA               +YHPDVCRGSNCGVQF  INEAYDIV+
Sbjct: 66  IRPDSSEYEVKKAFRQLAK--------------KYHPDVCRGSNCGVQFQTINEAYDIVL 125

Query: 123 NNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPY 177
             ++      E +E + +  DE + GM DPD D WEEWMGWEGAG RDYSSH+NPY
Sbjct: 126 KQIKNQMEGTEEFEPF-DVYDEGLNGMNDPDCDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy Swiss-Prot
Match: A7NS65 (Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=383372 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.1e-05
Identity = 26/66 (39.39%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 54  DPYRTLRIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQIN 113
           D Y  L +Q  AS+ E+KKAFR LA               QYHPDV +  +   +F +IN
Sbjct: 6   DYYEVLGVQRNASQDEIKKAFRRLAR--------------QYHPDVNKAPDAEAKFKEIN 57

Query: 114 EAYDIV 120
           EAY+++
Sbjct: 66  EAYEVL 57

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy Swiss-Prot
Match: A5UYW4 (Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.1e-05
Identity = 26/66 (39.39%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 54  DPYRTLRIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQIN 113
           D Y  L +Q  AS+ E+KKAFR LA               QYHPDV +  +   +F +IN
Sbjct: 6   DYYEVLGVQRNASQDEIKKAFRRLAR--------------QYHPDVNKAPDAEAKFKEIN 57

Query: 114 EAYDIV 120
           EAY+++
Sbjct: 66  EAYEVL 57

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy Swiss-Prot
Match: O66921 (Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.0e-05
Identity = 25/72 (34.72%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 48  SSSSVIDPYRTLRIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGV 107
           +SS+  D Y  L +   AS+ E+KKA+R L              + +YHPD+C+   C  
Sbjct: 2   ASSTKKDYYEILGVPRNASQEEIKKAYRRL--------------VRKYHPDICKKPECEE 59

Query: 108 QFHQINEAYDIV 120
           +F +INEAY ++
Sbjct: 62  KFKEINEAYQVL 59

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy Swiss-Prot
Match: Q65U54 (Chaperone protein DnaJ OS=Mannheimia succiniciproducens (strain MBEL55E) OX=221988 GN=dnaJ PE=3 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 8.9e-05
Identity = 25/69 (36.23%), Postives = 38/69 (55.07%), Query Frame = 0


Query: 54  DPYRTLRIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQ-FHQI 113
           D Y TL +Q GA E E+K+A++ LA+              +YHPD   G     + F ++
Sbjct: 5   DYYETLGVQKGADEKEIKRAYKRLAM--------------KYHPDRTNGDKAAEEKFKEV 59

Query: 114 NEAYDIVMN 122
           NEAY+I+M+
Sbjct: 65  NEAYEILMD 59

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy TrEMBL
Match: A0A5D3DUL4 (Chaperone protein dnaJ 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold901G00100 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.3e-70
Identity = 145/179 (81.01%), Postives = 153/179 (85.47%), Query Frame = 0


Query: 1   MASVATSGFIAR-SGSSSSSSWIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYRTL 60
           MASVAT+GFIAR S SSSSSS IR+ NRPKK+R+S++QLRVSC    SSSSSV DPYRTL
Sbjct: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSC----SSSSSVADPYRTL 60

Query: 61  RIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIV 120
           RIQPGASESEVKKAFRHLAL              QYHPDVCRGSNCGVQFHQINEAYDIV
Sbjct: 61  RIQPGASESEVKKAFRHLAL--------------QYHPDVCRGSNCGVQFHQINEAYDIV 120

Query: 121 MNNLRGISTPIETYET-YEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           MNNLRGISTPIETYET Y+E +DEPMRGM DPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 MNNLRGISTPIETYETIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy TrEMBL
Match: A0A1S3CPN7 (chaperone protein dnaJ 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502812 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.3e-70
Identity = 145/179 (81.01%), Postives = 153/179 (85.47%), Query Frame = 0


Query: 1   MASVATSGFIAR-SGSSSSSSWIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYRTL 60
           MASVAT+GFIAR S SSSSSS IR+ NRPKK+R+S++QLRVSC    SSSSSV DPYRTL
Sbjct: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSC----SSSSSVADPYRTL 60

Query: 61  RIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIV 120
           RIQPGASESEVKKAFRHLAL              QYHPDVCRGSNCGVQFHQINEAYDIV
Sbjct: 61  RIQPGASESEVKKAFRHLAL--------------QYHPDVCRGSNCGVQFHQINEAYDIV 120

Query: 121 MNNLRGISTPIETYET-YEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           MNNLRGISTPIETYET Y+E +DEPMRGM DPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 MNNLRGISTPIETYETIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy TrEMBL
Match: A0A6J1IYK7 (chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481844 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66
Identity = 136/178 (76.40%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 1   MASVATSGF-IARSGSSSSSSWIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYRTL 60
           MASVAT+G  IAR+GSSSSS WIRHRNR  KDRSS +++RV+C      SSS++DPY+TL
Sbjct: 1   MASVATAGISIARTGSSSSSFWIRHRNRSNKDRSSRNRVRVTC------SSSLLDPYQTL 60

Query: 61  RIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIV 120
           RIQPGASESEVKKAFR LAL              QYHPDVCRGSNCGVQFHQINEAYDIV
Sbjct: 61  RIQPGASESEVKKAFRRLAL--------------QYHPDVCRGSNCGVQFHQINEAYDIV 120

Query: 121 MNNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           MNNLRGISTPIET E+ EE VDE MRGMEDPDW+LWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 MNNLRGISTPIETCESCEEGVDEAMRGMEDPDWELWEEWMGWEGAGIRDYSSHINPYI 158

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy TrEMBL
Match: A0A6J1F1M8 (chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441378 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.6e-65
Identity = 136/180 (75.56%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 1   MASVATSGF-IARSGSSSSSS--WIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYR 60
           MASVAT+G  IAR+GSSSSSS  WIRHRNR  KDRSS +++RV+C      SSS++DPY+
Sbjct: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTC------SSSLLDPYQ 60

Query: 61  TLRIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYD 120
           TLRIQPGASESEVKKAFR LAL              QYHPDVCRGSNCGVQFHQINEAYD
Sbjct: 61  TLRIQPGASESEVKKAFRRLAL--------------QYHPDVCRGSNCGVQFHQINEAYD 120

Query: 121 IVMNNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           IVMNNLRGISTPIET E+ EE VDE MRGM+DPDW+LWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 IVMNNLRGISTPIETRESCEEGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 160

[Close]

BLAST of ClCG10G012870.1 vs. ExPASy TrEMBL
Match: A0A6J1GC69 (chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452806 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 134/178 (75.28%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 1   MASVATSGFIARSGSSSSSSWIRHRNRPKK-DRSSTSQLRVSCSSSSSSSSSVIDPYRTL 60
           MASV+T+GFIAR+G   SSSWIR RNR  K  RSS +Q+R   S SS SSSS+ DPYRTL
Sbjct: 1   MASVSTAGFIARTG---SSSWIRQRNRANKLHRSSRNQVR--ASYSSYSSSSMADPYRTL 60

Query: 61  RIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIV 120
           RIQPGASESEVKKAFR LAL              QYHPDVC+GSNCGVQFHQINEAYDIV
Sbjct: 61  RIQPGASESEVKKAFRQLAL--------------QYHPDVCKGSNCGVQFHQINEAYDIV 120

Query: 121 MNNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 178
           MNNLRGIS PIETY+TY++  DEPMRGM DPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 MNNLRGISMPIETYDTYDDGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 159

[Close]

BLAST of ClCG10G012870.1 vs. TAIR 10
Match: AT1G80920.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-40
Identity = 91/176 (51.70%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 3   SVATSGFIARSGS--SSSSSWIRHRNRPKKDRSSTSQLRVSCSSSSSSSSSVIDPYRTLR 62
           ++  +GF    GS  SSSSS  R +N  +K+    ++ +V C    SSSSSV+DPY+TL+
Sbjct: 6   TIGGNGFSGLPGSSFSSSSSSFRLKNSRRKNTKMLNRSKVVC----SSSSSVMDPYKTLK 65

Query: 63  IQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEAYDIVM 122
           I+P +SE EVKKAFR LA               +YHPDVCRGSNCGVQF  INEAYDIV+
Sbjct: 66  IRPDSSEYEVKKAFRQLAK--------------KYHPDVCRGSNCGVQFQTINEAYDIVL 125

Query: 123 NNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPY 177
             ++      E +E + +  DE + GM DPD D WEEWMGWEGAG RDYSSH+NPY
Sbjct: 126 KQIKNQMEGTEEFEPF-DVYDEGLNGMNDPDCDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of ClCG10G012870.1 vs. TAIR 10
Match: AT1G72070.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-07
Identity = 36/108 (33.33%), Postives = 51/108 (47.22%), Query Frame = 0


Query: 56  YRTLRIQPGASESEVKKAFRHLALQNLVYLTLPISSIFQYHPDVCRGSNCGVQFHQINEA 115
           Y  L + P AS++EVK+AF+ LAL              +YHPDV +G +    F +I  A
Sbjct: 41  YTVLGLTPLASQTEVKRAFKRLAL--------------KYHPDVHKGQD--KDFKEIKSA 100

Query: 116 YDIVMNNLRGISTPIETYETYEEAVDEPMRGMEDPDWDLWEEWMGWEG 164
           Y+ +M   +                +E M   E  + D WEEWMG+EG
Sbjct: 101 YECLMQKFK--------------KEEEEMEITEMGEIDEWEEWMGFEG 118

[Close]

BLAST of ClCG10G012870.1 vs. TAIR 10
Match: AT5G59610.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05
Identity = 43/146 (29.45%), Postives = 65/146 (44.52%), Query Frame = 0


Query: 30  KDRSSTSQLRVSCSSSSSSSSSVIDPYRTLRIQPGASESEVKKAFRHLALQNLVYLTLPI 89
           K RSS  + R     + + SS    PY  L + P A+  ++K+A+R LAL          
Sbjct: 53  KRRSSIQRRRNRIFVTRARSS----PYEILGVSPSATPQDIKRAYRKLAL---------- 112

Query: 90  SSIFQYHPDVCRGSNCGVQFHQINEAYDIVMNN-----------LRGISTPIETYETYEE 149
               +YHPDV + +N   +F +I  AY  ++N+             G ST  +T      
Sbjct: 113 ----KYHPDVNKEANAQEKFLKIKHAYTTLINSDSRRKYGSDSRATGSSTG-QTSRKGNS 172

Query: 150 AVDEPMRGMEDPDWDLWEEWMGWEGA 165
            V+E   G+ D   DL EE+  WE +
Sbjct: 173 QVEEDFYGLGDFFKDLQEEYKNWEAS 179

The following BLAST results are available for this feature:

BLAST of ClCG10G012870.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906426.1	5.6e-81	88.14	chaperone protein dnaJ 8, chloroplastic [Benincasa hispida]	[more]
XP_008465135.1	1.3e-69	81.01	PREDICTED: chaperone protein dnaJ 8, chloroplastic [Cucumis melo] >TYK27005.1 ch...	[more]
XP_022983187.1	5.1e-66	76.40	chaperone protein dnaJ 8, chloroplastic-like [Cucurbita maxima]	[more]
XP_022934104.1	7.4e-65	75.56	chaperone protein dnaJ 8, chloroplastic-like [Cucurbita moschata]	[more]
XP_023526464.1	7.4e-65	75.56	chaperone protein dnaJ 8, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG65...	[more]

BLAST of ClCG10G012870.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAG8	1.5e-39	51.70	Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 ...	[more]
A7NS65	3.1e-05	39.39	Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=...	[more]
A5UYW4	3.1e-05	39.39	Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=dnaJ PE=3 S...	[more]
O66921	4.0e-05	34.72	Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=...	[more]
Q65U54	8.9e-05	36.23	Chaperone protein DnaJ OS=Mannheimia succiniciproducens (strain MBEL55E) OX=2219...	[more]

BLAST of ClCG10G012870.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DUL4	6.3e-70	81.01	Chaperone protein dnaJ 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CPN7	6.3e-70	81.01	chaperone protein dnaJ 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502812 ...	[more]
A0A6J1IYK7	2.5e-66	76.40	chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1F1M8	3.6e-65	75.56	chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1GC69	2.0e-63	75.28	chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of ClCG10G012870.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80920.1	1.0e-40	51.70	Chaperone DnaJ-domain superfamily protein	[more]
AT1G72070.1	1.5e-07	33.33	Chaperone DnaJ-domain superfamily protein	[more]
AT5G59610.1	3.1e-05	29.45	Chaperone DnaJ-domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 88..103 score: 26.71 coord: 104..124 score: 23.18 coord: 56..74 score: 39.56
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 53..124 e-value: 2.2E-7 score: 40.5
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 54..137 score: 13.191464
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 54..118 e-value: 2.69563E-12 score: 56.7849
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 38..142 e-value: 1.7E-13 score: 52.4
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 51..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR24074:SF37	HEAT SHOCK PROTEIN BINDING PROTEIN	coord: 5..177
None	No IPR available	PANTHER	PTHR24074	CO-CHAPERONE PROTEIN DJLA	coord: 5..177

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G012870	ClCG10G012870	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G012870.1-exon	ClCG10G012870.1-exon-CG_Chr10:26924054..26924417	exon
ClCG10G012870.1-exon	ClCG10G012870.1-exon-CG_Chr10:26924470..26924580	exon
ClCG10G012870.1-exon	ClCG10G012870.1-exon-CG_Chr10:26925297..26925764	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G012870.1-five_prime_utr	ClCG10G012870.1-five_prime_utr-CG_Chr10:26924054..26924177	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G012870.1-cds	ClCG10G012870.1-cds-CG_Chr10:26924178..26924417	CDS
ClCG10G012870.1-cds	ClCG10G012870.1-cds-CG_Chr10:26924470..26924580	CDS
ClCG10G012870.1-cds	ClCG10G012870.1-cds-CG_Chr10:26925297..26925479	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G012870.1-three_prime_utr	ClCG10G012870.1-three_prime_utr-CG_Chr10:26925480..26925764	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G012870.1	ClCG10G012870.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005634	nucleus