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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTGGTTCGCCAATAGGAAGACGATATTTGGTATATACTCAACGACGTCGTATGATTCTTCCGATACGTCGGCCATTCGGTAATTTTGATCTTTCGGACAAGAACTTTCAAAGGCCGTATCCTGATAATTGATAAGGGTCAAGCCAAGCCCAGTAGCCTCCTCTCTCCGTCACCGCTTCCTTTCCGATTCCGGCCGCCGCCTCCGCCTTCCCCTTCTTCTTCACTTCATGCCTTTCTTCTTCGTCTGTTAGTGAGGAAGCACCGTCTCGAGAATCCACCTGCAGAGTTCTGTTGA mRNA sequence ATGTGGTTCGCCAATAGGAAGACGATATTTGGCCGTATCCTGATAATTGATAAGGGTCAAGCCAAGCCCAGTAGCCTCCTCTCTCCGTCACCGCTTCCTTTCCGATTCCGGCCGCCGCCTCCGCCTTCCCCTTCTTCTTCACTTCATGCCTTTCTTCTTCGTCTGTTAGTGAGGAAGCACCGTCTCGAGAATCCACCTGCAGAGTTCTGTTGA Coding sequence (CDS) ATGTGGTTCGCCAATAGGAAGACGATATTTGGCCGTATCCTGATAATTGATAAGGGTCAAGCCAAGCCCAGTAGCCTCCTCTCTCCGTCACCGCTTCCTTTCCGATTCCGGCCGCCGCCTCCGCCTTCCCCTTCTTCTTCACTTCATGCCTTTCTTCTTCGTCTGTTAGTGAGGAAGCACCGTCTCGAGAATCCACCTGCAGAGTTCTGTTGA Protein sequence MWFANRKTIFGRILIIDKGQAKPSSLLSPSPLPFRFRPPPPPSPSSSLHAFLLRLLVRKHRLENPPAEFC
Homology
BLAST of ClCG10G012685.1 vs. NCBI nr
Match: KAA0052794.1 (uncharacterized protein E6C27_scaffold1614G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 3.4e-05 Identity = 31/48 (64.58%), Postives = 33/48 (68.75%), Query Frame = 0
Query: 23 PSSLLSPSPLPFRFRPPPPPSPSSSLHAFLLRLLVRKHRLENPPAEFC 71
P+ LLSP PLPFRFRPPP P S LH FLL V K+ L NPPA FC
Sbjct: 71 PTILLSPPPLPFRFRPPPLP---SLLHPFLLPPFVWKYSLHNPPAYFC 115
BLAST of ClCG10G012685.1 vs. ExPASy TrEMBL
Match: A0A5A7UBN5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1614G00060 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.6e-05 Identity = 31/48 (64.58%), Postives = 33/48 (68.75%), Query Frame = 0
Query: 23 PSSLLSPSPLPFRFRPPPPPSPSSSLHAFLLRLLVRKHRLENPPAEFC 71
P+ LLSP PLPFRFRPPP P S LH FLL V K+ L NPPA FC
Sbjct: 71 PTILLSPPPLPFRFRPPPLP---SLLHPFLLPPFVWKYSLHNPPAYFC 115
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0052794.1 | 3.4e-05 | 64.58 | uncharacterized protein E6C27_scaffold1614G00060 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UBN5 | 1.6e-05 | 64.58 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG10G012685.1-exon | ClCG10G012685.1-exon-CG_Chr10:26717197..26717378 | exon |
| ClCG10G012685.1-exon | ClCG10G012685.1-exon-CG_Chr10:26717462..26717492 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG10G012685.1-cds | ClCG10G012685.1-cds-CG_Chr10:26717197..26717378 | CDS |
| ClCG10G012685.1-cds | ClCG10G012685.1-cds-CG_Chr10:26717462..26717492 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG10G012685.1 | ClCG10G012685.1-protein | polypeptide |
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