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ClCG10G009130.2 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCACCAGTTCTTAATGGGGATATGGCCTATTGGAGCCATTGTTCATGATTCCAATGGCGATGTTGTGTTCGCCATGGAGGACCACTTTCTTTTGTCCAGTTCCATTGATCTTGCAGAAGCTATTGCCATGGATGAGAGCATGATCAATGCTCTTGAAGATAGTATAACTCCACCCTAGGCTAAAATTGATTCCTTGATTATGTGGAATTGCTTGACTAAAAAATCTAGATATGCTAACAAGGTTCAAGTTCTTGTTGATTCTCTCTGCAATTTGCATGAAGGTCATTGATTCACAACTTCCTTTTTGTCAATCGTAAGTGTAATTATGTTACTTAGGCCTTAGCTTCTCATACTCGTTGTCTCAAAGTTTCAGACATTTGGCTTCAAGAGTACCATACTTCATGGGTGGATTCTATTTTACTTACTAATTTGTTTAGTTCATAAGTTCTATTGTGTTCTTTTTATGCGTTGTACTAAAAAATGGTGATGCCAAGAAGAATATCGATGTCAAATAAAATGTCTAGGTCTCTACTTTACAAAAATGTTGATATGGATGAATATTTCAATTAGTAAAACAAAAAATAAAAATAAATAAAATAGTAAATAAATATTTTACACTCTTTTAAACAAATTAAAGGAAAATTATTATAAATAGAAAAAATATCAAACATTTACAAATATAGAAAAATTTAACCGTCTATCCGCGATAGACCGTGATAGGCTGTTATCTCTCAAGCGAATCGCAGTCTATCGCTCAAGCGACAGGAGTTTATCACGGTCTATCGCTAATAGACAGTGAAACTTTTCTATATTTGTAAATAGTTTGACCCATTTTGCTATATTTGAAAACAACCCCAAATTAAAATGTTTATTATTTATAGTATATTCACATTAGTGACATTTTGTTGCTTGTTATATATATATATATATATATATATATTTCATGAATTATTTACGATCTTACAAAAAATCGGTTTATCCTATATATATGTTGAACCTATGGAAATGTAAAAATAACGATGGAAATATTGACATGTCAATCAGAATTTATATCATGGATAAAACTCATGCACGTAGTACATGAATTTCCTCCCTCAAATCAACATCCACGTGCTAGTAAACATAAGAAACATATGCATGGTACAAGAGTTTTCCAATGAACTCGAGCACGTACATGAGCTTTGTTGCCATTTTTTTATAAAAAAAAACTGTTGTTCTTAGAATAATAAATGGTATTGGTAAAGTCTATAAAAAAAACAATACTTTTGTTCCAATAATTAAATTTGGTTGAATAATTTGAAAATTGATTGAAAGAAAATGAAGTTTGCCAAAAATTACAAAACAAAATTCAAAATAAGATAATTCATATGAATATTAGAACAAAATTAGATATCCATTATATAAATATGCCAAAATTAGATGTACATTATATAAATATGCTTAGTGGCTAAAGGCCATGTGTCTACTAATGACACATTCTTAGTGGCTAAAGGCCATGTGTCTACTGACACATTCTTAGTGGCTAAAGGCCATGTGTCTACTAATGCATCTTTGCGTATAAATAATGGCATAGGGTGAAGGTTCTCACTTACTGGGAGACGACTCTGAAAATTCTCAGAATCCTTCTCACAGGAGCATGAAATGGAGGCTGGTTATGGTGAGGGAGAATTTGTGCAGAGCTTTCGCCTCTTTAACTCGTTTCTCTCCTCTCTTTTGAATGGAGAAGCTTTGGACTATTTATAGGCGTCAAAAAGTTGAACTCATGATGACCTGACACCTTTATATTAAATTCCATGTCCTGCTGCGCAGACCTTTCACATCGTCGGCCCATTTGTTATGCCATGATTTGATAACGTGTTATCCTTTTGCATATTGACATGACAGCTTTTGCCCAGGCATCTGTATCTACTTTTTCTCAACGCATGGTCTCGACGCATGGGTTTCCACTTGTTCTCGCAACAGCTTCCTCTCTAGTACTTGGGTTATTCTTCTTAATCTTGTGTTAAGAACAAAAAAGCTCATAATTTTTCAGGTATTTTCTTTTGTAAATGGTGCCAACGCATGGTAATACATTTTACATAATTCAACTACCAAAATCATGCGTTTAGCTCTAAAGTTACTCTAATTAATTCAAATAATGACTATAATAACTTGTATTTCTACAAGTTATCAGTGGCCATGAAATGCAACTACCTACTTGCCAAATTGCCTTTAAATAGAGGATTTTGGTGGATATTGTAATACACACATTGGAGAGAAAAGAAGAGAAAAGATTGATGTTGAGAAACTTCATAAAATCTCACTTTCTTTATGTTAGTTTATTTTAAGTTTATTTTATTTAATTTGATTATTTTAATTACTTTTATATTATTTTATTATTTTATTATTATAATTTCTCGATTTTCGTGCTCCCGTTTTTCTGTCATTTTGCCCGTCAATTTTACAACACGTTATCAGCACAATCTCTTGTCGTTTTCCCGTAGAAGGTAGGTTTTGAAGGTATGTCATTTTCTATTTATTATAATTAGTAAATTAAACATTGTTTTGCATTCTTAGTATATATTAAATTGCTAATATAAATATAATTCTTTGTGATAGTGTTATCATGGCAAATCTTACGAAAATAGAATTTGCAGCCTTTGACATCAATGGAAATAATTATTTGTCATAGGTGCTTGATGCTGAAATACATCTAGATGCCATGAACCTAAGAGAAACAATTAAAGAGGGAAATGCAACATCCATTAAGGAAAAAGCAAAAGCTATGATTTTCCTTTGTCGTCATCTCCACAAGGGATTGAAGATGAAATATTTAACAATAAAAGATCCTTGTATCTTGTGGAAGAATTTAAAAAAGAAATATGATCATCAGAAAACAGTCATTCTTCCTAAAGCTCGTTATGAATGGATGCATTTGAGGCTTCAAGATTTCAAATCAGTTAGTGACTACAACTCCACGTTATTTAAAATCAGTTCAAAATTGCTATTATGCAGAGAGAAAATTACTGATGCAGATATGTTGGAGAAGACATTTTCTACATTTCATGCCTCGAATATGCTCCTGCAGCAGCAATGTCAAAAGAAAGGTTTTAAACAATATTCTGAATTAATTTTATATCTTCTCATGGTTGAACAAACTAATGAGCTATTGATGAAAAACCATGAATCTCGACCAACTGGAACAACACCATTCCCTGAAGTGAATGCTGTAAATTTTAATAGTCGTGGTCGTGGTCGTGACCGTGGCAGAGGAAGAAATAAATATTTTTTTCGTGGTGGTCATTCTAATCATCCAAATTTCAAAAGAACCACTCGAAATGATGATCATAAAGGAAAAGCTCCACAAGATAAAAATTCAAAAGATGATGAGCATAAATGCTTCCGATGCGAGATGACTAGTCACTAG ATGATGCACCAGTTCTTAATGGGGATATGGCCTATTGGAGCCATTGTTCATGATTCCAATGGCGATGTTGTGTTCGCCATGGAGGACCACTTTCTTTTGTCCAGTTCCATTGATCTTGCAGAAGCTATTGCCATGGATGAGAGCATGATCAATGCTCTTGAAGATAGTTCTCACTTACTGGGAGACGACTCTGAAAATTCTCAGAATCCTTCTCACAGGAGCATGAAATGGAGGCTGGTTATGGTGCTTGATGCTGAAATACATCTAGATGCCATGAACCTAAGAGAAACAATTAAAGAGGGAAATGCAACATCCATTAAGGAAAAAGCAAAAGCTATGATTTTCCTTTGTCGTCATCTCCACAAGGGATTGAAGATGAAATATTTAACAATAAAAGATCCTTGTATCTTGTGGAAGAATTTAAAAAAGAAATATGATCATCAGAAAACAGTCATTCTTCCTAAAGCTCGTTATGAATGGATGCATTTGAGGCTTCAAGATTTCAAATCAGTTAGTGACTACAACTCCACGTTATTTAAAATCAGTTCAAAATTGCTATTATGCAGAGAGAAAATTACTGATGCAGATATGTTGGAGAAGACATTTTCTACATTTCATGCCTCGAATATGCTCCTGCAGCAGCAATGTCAAAAGAAAGGTTTTAAACAATATTCTGAATTAATTTTATATCTTCTCATGGTTGAACAAACTAATGAGCTATTGATGAAAAACCATGAATCTCGACCAACTGGAACAACACCATTCCCTGAAGTGAATGCTGTAAATTTTAATAGTCGTGGTCGTGGTCGTGACCGTGGCAGAGGAAGAAATAAATATTTTTTTCGTGGTGGTCATTCTAATCATCCAAATTTCAAAAGAACCACTCGAAATGATGATCATAAAGGAAAAGCTCCACAAGATAAAAATTCAAAAGATGATGAGCATAAATGCTTCCGATGCGAGATGACTAGTCACTAG ATGATGCACCAGTTCTTAATGGGGATATGGCCTATTGGAGCCATTGTTCATGATTCCAATGGCGATGTTGTGTTCGCCATGGAGGACCACTTTCTTTTGTCCAGTTCCATTGATCTTGCAGAAGCTATTGCCATGGATGAGAGCATGATCAATGCTCTTGAAGATAGTTCTCACTTACTGGGAGACGACTCTGAAAATTCTCAGAATCCTTCTCACAGGAGCATGAAATGGAGGCTGGTTATGGTGCTTGATGCTGAAATACATCTAGATGCCATGAACCTAAGAGAAACAATTAAAGAGGGAAATGCAACATCCATTAAGGAAAAAGCAAAAGCTATGATTTTCCTTTGTCGTCATCTCCACAAGGGATTGAAGATGAAATATTTAACAATAAAAGATCCTTGTATCTTGTGGAAGAATTTAAAAAAGAAATATGATCATCAGAAAACAGTCATTCTTCCTAAAGCTCGTTATGAATGGATGCATTTGAGGCTTCAAGATTTCAAATCAGTTAGTGACTACAACTCCACGTTATTTAAAATCAGTTCAAAATTGCTATTATGCAGAGAGAAAATTACTGATGCAGATATGTTGGAGAAGACATTTTCTACATTTCATGCCTCGAATATGCTCCTGCAGCAGCAATGTCAAAAGAAAGGTTTTAAACAATATTCTGAATTAATTTTATATCTTCTCATGGTTGAACAAACTAATGAGCTATTGATGAAAAACCATGAATCTCGACCAACTGGAACAACACCATTCCCTGAAGTGAATGCTGTAAATTTTAATAGTCGTGGTCGTGGTCGTGACCGTGGCAGAGGAAGAAATAAATATTTTTTTCGTGGTGGTCATTCTAATCATCCAAATTTCAAAAGAACCACTCGAAATGATGATCATAAAGGAAAAGCTCCACAAGATAAAAATTCAAAAGATGATGAGCATAAATGCTTCCGATGCGAGATGACTAGTCACTAG MMHQFLMGIWPIGAIVHDSNGDVVFAMEDHFLLSSSIDLAEAIAMDESMINALEDSSHLLGDDSENSQNPSHRSMKWRLVMVLDAEIHLDAMNLRETIKEGNATSIKEKAKAMIFLCRHLHKGLKMKYLTIKDPCILWKNLKKKYDHQKTVILPKARYEWMHLRLQDFKSVSDYNSTLFKISSKLLLCREKITDADMLEKTFSTFHASNMLLQQQCQKKGFKQYSELILYLLMVEQTNELLMKNHESRPTGTTPFPEVNAVNFNSRGRGRDRGRGRNKYFFRGGHSNHPNFKRTTRNDDHKGKAPQDKNSKDDEHKCFRCEMTSH Homology
BLAST of ClCG10G009130.2 vs. NCBI nr
Match: WP_217833168.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 363.2 bits (931), Expect = 2.3e-96 Identity = 187/223 (83.86%), Postives = 198/223 (88.79%), Query Frame = 0
BLAST of ClCG10G009130.2 vs. NCBI nr
Match: XP_022144017.1 (uncharacterized protein LOC111013806 [Momordica charantia]) HSP 1 Score: 335.1 bits (858), Expect = 6.7e-88 Identity = 172/223 (77.13%), Postives = 189/223 (84.75%), Query Frame = 0
BLAST of ClCG10G009130.2 vs. NCBI nr
Match: XP_028787995.1 (uncharacterized protein LOC114743980 [Prosopis alba]) HSP 1 Score: 302.4 bits (773), Expect = 4.8e-78 Identity = 162/252 (64.29%), Postives = 193/252 (76.59%), Query Frame = 0
BLAST of ClCG10G009130.2 vs. NCBI nr
Match: XP_028767563.1 (uncharacterized protein LOC114725246 [Prosopis alba] >XP_028771288.1 uncharacterized protein LOC114728545 [Prosopis alba] >XP_028771292.1 uncharacterized protein LOC114728549 [Prosopis alba]) HSP 1 Score: 302.0 bits (772), Expect = 6.3e-78 Identity = 161/252 (63.89%), Postives = 193/252 (76.59%), Query Frame = 0
BLAST of ClCG10G009130.2 vs. NCBI nr
Match: AQY61301.1 (Gag [Vitis vinifera]) HSP 1 Score: 302.0 bits (772), Expect = 6.3e-78 Identity = 157/261 (60.15%), Postives = 195/261 (74.71%), Query Frame = 0
BLAST of ClCG10G009130.2 vs. ExPASy TrEMBL
Match: A0A6J1CSH6 (uncharacterized protein LOC111013806 OS=Momordica charantia OX=3673 GN=LOC111013806 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 3.2e-88 Identity = 172/223 (77.13%), Postives = 189/223 (84.75%), Query Frame = 0
BLAST of ClCG10G009130.2 vs. ExPASy TrEMBL
Match: A0A286QJ35 (Gag OS=Vitis vinifera OX=29760 GN=Gag PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 3.0e-78 Identity = 157/261 (60.15%), Postives = 195/261 (74.71%), Query Frame = 0
BLAST of ClCG10G009130.2 vs. ExPASy TrEMBL
Match: A0A438ID00 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1841 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77 Identity = 156/259 (60.23%), Postives = 198/259 (76.45%), Query Frame = 0
BLAST of ClCG10G009130.2 vs. ExPASy TrEMBL
Match: A5B4M9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_015758 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77 Identity = 156/259 (60.23%), Postives = 193/259 (74.52%), Query Frame = 0
BLAST of ClCG10G009130.2 vs. ExPASy TrEMBL
Match: A5AJ43 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006175 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77 Identity = 156/259 (60.23%), Postives = 193/259 (74.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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