ClCG10G007450.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G007450.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	zinc finger CCCH domain-containing protein 5
Location	CG_Chr10: 10949947 .. 10952357 (-)
Sequence length	855
RNA-Seq Expression	ClCG10G007450.1
Synteny	ClCG10G007450.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAACCTAAACTCATAGGAGAGGAAGAAGAGAAGCCATGTACGATGGAAAATCTATGCAGGAAGGAGAAGAGGAAAGCGTTGAAGAAGATCAAACGGAAGCAATTAAGAAAAGAAGTGGCGCTGAAAAAGCTACAGGAAGAGGAGGCGCGGTTGAACGACCCTGAAGAGCAGAGGAGGATTCGGTTGATGGAGCTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTCGAGGAGCGTGAAAGGGCATGGATGGAGGCTATGGAGTTGAAGAAGAAGAAGATGGCTGAGGAGGAAGAAGAAGAGCAGCAACGGAGAGCGCTGGAAGAAGAATCGACGGCGCGGCAGGTTTTTCTTTCCCTTCTTGTGATTCTCTAGTGGCTATCTGCTATTTTATTTTACTTTATTCTAATTTTGCTTTGTTGTTGAACAGTACTCGTAGCCTTTTTATAGATTTCTAGTTAGATTTCAACTTTATAGTGCATGATTACTGACTCAGGTTCCTCAATACATAAAAAACATCATTTGAAATTCTTGCAACAGAAACTGCAATCGCTTTCTATTGCTATGTCGTGGGTCACATATCTCCTCTTGTTTTAGCGGAGGAAAATTGTTCACTCCAACAGTTTGCAACCTTCTTTTGTAGGCTGAAAATGAAAACGAGTTTAATGGGGAAGATGGTTGGGAATACATTGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGAAGAGATAATTTTGAAGAAGAAACTGATTAAGGTTCCCAAGAAAGGCGTTGCACCTGAGAAAAGCCTTGAGGTATTCATTCTGCAACCAGGCTATTATTGTTTTCTAGATCATCATTGTTTATGTTAAAAGAAAATTTCCTGGGACATGTTGGAATGAAAAGTCTTATGATCATAGATATTTATATATACTCTTTTTTGTAGGATGCTCATAGGCCTACATCAAACCCTCTTCCTCCGCAATCGGAAGCTTTTACAGATTATAAGAATGCACCAATTTCAACTAGACAAGTGATTGAGGATGTTGCAAGCCAAGTGCCAAACTTTGGAACTGAACAGGCATTTCTCCTTCTCTTCCTCTGTATACCTACTATCTGTATATACCTATTCCTTCTCTAGTAGTTTTATAGTTATTCAATTGTCATCTTAATAAATCTTATCCAAAAAAATTGGCATCTTAATAAATAACCTTTACCTATTATCTTTTTATTACGACAGGATAAATCACATTGTCCATTTCATCTTAAAACTGGAGCTTGTCGATTTGGTCAACGTTGTAGCAGAATTCACTTCTACCCTGACAAATCGTGTACATTACTTATCAAGAACATGTATAATGGTCCTGGCCTTGCTTGGGAGCAAGATGAGGGGCTGGAGGTCTGTTAATGATGCTCATACAATTATTGTATCCTCAAAATGAATTTGAAGTTTTGCTATTGCATCAGTTATCCCTATATAATTGTTACTATGGTTGGATTAGTAAGCATTAATGAGTAGAATTAGATTAACTTGTTCAGGTACATTTTATGACCAGAGAATTCACCAAACTAAATATAATGCTGTTAGTTTTGTGGTCATCACACGTTCATTTTGAGTGGAAGAAAAGAGGGCTGTCATCCTTTTTCTGGTGTTCTTGGGTTAATATATTGTTTCTTTATCAAGACATTTTGATTGAAGCTGGTAAAATTAAGAATGGATTTATCAGTTTATTGTAATTTCACCTTACATCGTAAATGGATTACACTTTGGGTACAAGGCCTGATCTTTGATGAAATAATTTACGATGCTTAGTTCTTGGCAATTTGGCGGCTGGAAAAAATTATCTTCATATTCAATTCTTCCATAGATGCCTAATGCAACCGTTATACTGAGTTTCATCATGTTGTGATTATTAGTGGTTTTGATATTTAGTATCCTGCTTTTATTTTTATATTGAATTTCTTGACCTACTTTGTATCAGAGACTTACTGCAAGAATTGTGTCAAATTGTCATGGAGGGTTACAGTTTTGCTCTTGAGTCCCTTTGGAGTTGATAATACGAAAGCAAATTTTGTATCCTACTGCATTGTCTTTTTAACTATCACGTAGTCTTTTACCTGCAAGCTTGTAGTTAGTAATAGCATATTGCATTCTTTTTGCTAATTTTCCCGTTCTGTCTCTGTTGAAGGAGTTTTATTTATATTATTTTTGTGAACTCTATGTATATATTTTCTGCATGCAGTCTAAGGACATTTAATTGTAATAGCCGTAATTTTTTTTATGAACCATAACAAGTTCCTTATTTATACTTTGTGAGCATTGTTAGTCAGTATATGAACAATCCAGATGAATGTCAAGGAGAATTGTATTCTCCCGGGAGATTTCCGATGAAACTTTACCTTTCTCCGATGACCCTCTGA

mRNA sequence

ATGGAGGAACCTAAACTCATAGGAGAGGAAGAAGAGAAGCCATGTACGATGGAAAATCTATGCAGGAAGGAGAAGAGGAAAGCGTTGAAGAAGATCAAACGGAAGCAATTAAGAAAAGAAGTGGCGCTGAAAAAGCTACAGGAAGAGGAGGCGCGGTTGAACGACCCTGAAGAGCAGAGGAGGATTCGGTTGATGGAGCTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTCGAGGAGCGTGAAAGGGCATGGATGGAGGCTATGGAGTTGAAGAAGAAGAAGATGGCTGAGGAGGAAGAAGAAGAGCAGCAACGGAGAGCGCTGGAAGAAGAATCGACGGCGCGGCAGGCTGAAAATGAAAACGAGTTTAATGGGGAAGATGGTTGGGAATACATTGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGAAGAGATAATTTTGAAGAAGAAACTGATTAAGGTTCCCAAGAAAGGCGTTGCACCTGAGAAAAGCCTTGAGGATGCTCATAGGCCTACATCAAACCCTCTTCCTCCGCAATCGGAAGCTTTTACAGATTATAAGAATGCACCAATTTCAACTAGACAAGTGATTGAGGATGATAAATCACATTGTCCATTTCATCTTAAAACTGGAGCTTGTCGATTTGGTCAACGTTGTAGCAGAATTCACTTCTACCCTGACAAATCGTGTACATTACTTATCAAGAACATGTATAATGGTCCTGGCCTTGCTTGGGAGCAAGATGAGGGGCTGGAGTATATGAACAATCCAGATGAATGTCAAGGAGAATTGTATTCTCCCGGGAGATTTCCGATGAAACTTTACCTTTCTCCGATGACCCTCTGA

Coding sequence (CDS)

ATGGAGGAACCTAAACTCATAGGAGAGGAAGAAGAGAAGCCATGTACGATGGAAAATCTATGCAGGAAGGAGAAGAGGAAAGCGTTGAAGAAGATCAAACGGAAGCAATTAAGAAAAGAAGTGGCGCTGAAAAAGCTACAGGAAGAGGAGGCGCGGTTGAACGACCCTGAAGAGCAGAGGAGGATTCGGTTGATGGAGCTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTCGAGGAGCGTGAAAGGGCATGGATGGAGGCTATGGAGTTGAAGAAGAAGAAGATGGCTGAGGAGGAAGAAGAAGAGCAGCAACGGAGAGCGCTGGAAGAAGAATCGACGGCGCGGCAGGCTGAAAATGAAAACGAGTTTAATGGGGAAGATGGTTGGGAATACATTGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGAAGAGATAATTTTGAAGAAGAAACTGATTAAGGTTCCCAAGAAAGGCGTTGCACCTGAGAAAAGCCTTGAGGATGCTCATAGGCCTACATCAAACCCTCTTCCTCCGCAATCGGAAGCTTTTACAGATTATAAGAATGCACCAATTTCAACTAGACAAGTGATTGAGGATGATAAATCACATTGTCCATTTCATCTTAAAACTGGAGCTTGTCGATTTGGTCAACGTTGTAGCAGAATTCACTTCTACCCTGACAAATCGTGTACATTACTTATCAAGAACATGTATAATGGTCCTGGCCTTGCTTGGGAGCAAGATGAGGGGCTGGAGTATATGAACAATCCAGATGAATGTCAAGGAGAATTGTATTCTCCCGGGAGATTTCCGATGAAACTTTACCTTTCTCCGATGACCCTCTGA

Protein sequence

MEEPKLIGEEEEKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIEDDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNPDECQGELYSPGRFPMKLYLSPMTL

Homology

[Close]

BLAST of ClCG10G007450.1 vs. NCBI nr
Match: XP_038905961.1 (zinc finger CCCH domain-containing protein 5 isoform X2 [Benincasa hispida] >XP_038905962.1 zinc finger CCCH domain-containing protein 5 isoform X2 [Benincasa hispida])

HSP 1 Score: 458.8 bits (1179), Expect = 3.5e-125
Identity = 248/267 (92.88%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MEEPKLIGEEEEKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQR 60
           MEEP LIGEEEEKPC+MENLCRKEKRKALKKIKRKQLRKEVALK LQEEEARLNDPEEQR
Sbjct: 1   MEEPNLIGEEEEKPCSMENLCRKEKRKALKKIKRKQLRKEVALKMLQEEEARLNDPEEQR 60

Query: 61  RIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQA 120
           RIRLMELEEEERSERERKLFEE ERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQA
Sbjct: 61  RIRLMELEEEERSERERKLFEESERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQA 120

Query: 121 ENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLP 180
           ENENEFN EDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGV PEKSLEDAHRPTSNPLP
Sbjct: 121 ENENEFNEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVQPEKSLEDAHRPTSNPLP 180

Query: 181 PQSEAFTDYKNAPISTRQVIED------------DKSHCPFHLKTGACRFGQRCSRIHFY 240
           PQSEAFTDY NAPISTRQVIED            DKSHCPFHLKTGACRFGQRCSRIHFY
Sbjct: 181 PQSEAFTDYMNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFY 240

Query: 241 PDKSCTLLIKNMYNGPGLAWEQDEGLE 256
           PDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 PDKSCTLLIKNMYNGPGLAWEQDEGLE 267

[Close]

BLAST of ClCG10G007450.1 vs. NCBI nr
Match: XP_038905963.1 (zinc finger CCCH domain-containing protein 5 isoform X3 [Benincasa hispida] >XP_038905964.1 zinc finger CCCH domain-containing protein 5 isoform X3 [Benincasa hispida])

HSP 1 Score: 458.8 bits (1179), Expect = 3.5e-125
Identity = 248/267 (92.88%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MEEPKLIGEEEEKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQR 60
           MEEP LIGEEEEKPC+MENLCRKEKRKALKKIKRKQLRKEVALK LQEEEARLNDPEEQR
Sbjct: 1   MEEPNLIGEEEEKPCSMENLCRKEKRKALKKIKRKQLRKEVALKMLQEEEARLNDPEEQR 60

Query: 61  RIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQA 120
           RIRLMELEEEERSERERKLFEE ERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQA
Sbjct: 61  RIRLMELEEEERSERERKLFEESERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQA 120

Query: 121 ENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLP 180
           ENENEFN EDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGV PEKSLEDAHRPTSNPLP
Sbjct: 121 ENENEFNEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVQPEKSLEDAHRPTSNPLP 180

Query: 181 PQSEAFTDYKNAPISTRQVIED------------DKSHCPFHLKTGACRFGQRCSRIHFY 240
           PQSEAFTDY NAPISTRQVIED            DKSHCPFHLKTGACRFGQRCSRIHFY
Sbjct: 181 PQSEAFTDYMNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFY 240

Query: 241 PDKSCTLLIKNMYNGPGLAWEQDEGLE 256
           PDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 PDKSCTLLIKNMYNGPGLAWEQDEGLE 267

[Close]

BLAST of ClCG10G007450.1 vs. NCBI nr
Match: XP_008452219.1 (PREDICTED: zinc finger CCCH domain-containing protein 5 [Cucumis melo])

HSP 1 Score: 446.8 bits (1148), Expect = 1.4e-121
Identity = 244/291 (83.85%), Postives = 255/291 (87.63%), Query Frame = 0


Query: 1   MEEPKLIG----------EEEEKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEE 60
           MEEPKL G          EEE KPC+++NLCRKEKRKALKKIKRKQLRKE+ALK+LQEEE
Sbjct: 1   MEEPKLGGGGGGGEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQEEE 60

Query: 61  ARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRA 120
           ARLNDPEEQRR++LMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRA
Sbjct: 61  ARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRA 120

Query: 121 LEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLED 180
           LEEEST RQAENENEFN EDGWEYIEGPAE+IWKGEEIILKKKLIKVPKKGV PEKSLED
Sbjct: 121 LEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKSLED 180

Query: 181 AHRPTSNPLPPQSEAFTDYKNAPISTRQVIED------------DKSHCPFHLKTGACRF 240
           AHRPTSNPLPPQSEAFTDYKN PISTRQVIED            DKSHCPFHLKTGACRF
Sbjct: 181 AHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRF 240

Query: 241 GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNP-DECQGELY 269
           GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE+ +   + C  E Y
Sbjct: 241 GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEFTDEEVERCYEEFY 291

[Close]

BLAST of ClCG10G007450.1 vs. NCBI nr
Match: XP_031738076.1 (zinc finger CCCH domain-containing protein 5 isoform X3 [Cucumis sativus])

HSP 1 Score: 442.6 bits (1137), Expect = 2.6e-120
Identity = 240/283 (84.81%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 1   MEEPKLIGEEEE--KPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEE 60
           MEE +LIGEEEE  KPC++ENLCRKEKRKALKKIKRKQLRKE+ALK+LQEEE RLNDPEE
Sbjct: 1   MEELELIGEEEEEVKPCSVENLCRKEKRKALKKIKRKQLRKELALKRLQEEEVRLNDPEE 60

Query: 61  QRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTAR 120
           QRRI+LMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEEST R
Sbjct: 61  QRRIQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPR 120

Query: 121 QAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNP 180
           +AENENEFN EDGWEYIEGPAE+IWKGEEIILKKKLIKVPKK V PEKS EDAHRPTSNP
Sbjct: 121 EAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKSVEPEKSFEDAHRPTSNP 180

Query: 181 LPPQSEAFTDYKNAPISTRQVIED------------DKSHCPFHLKTGACRFGQRCSRIH 240
           LPPQSEAFTDYKN PIST+QVIED            DKSHCPFHLKTGACRFGQRCSRIH
Sbjct: 181 LPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIH 240

Query: 241 FYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNP-DECQGELY 269
           FYP+KSCTLLIKNMYNGPGLAWEQDEGLE+ +   + C  E Y
Sbjct: 241 FYPEKSCTLLIKNMYNGPGLAWEQDEGLEFTDEEVERCYEEFY 283

[Close]

BLAST of ClCG10G007450.1 vs. NCBI nr
Match: XP_004134259.1 (zinc finger CCCH domain-containing protein 5 isoform X2 [Cucumis sativus] >KAE8650193.1 hypothetical protein Csa_009557 [Cucumis sativus])

HSP 1 Score: 442.6 bits (1137), Expect = 2.6e-120
Identity = 240/283 (84.81%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 1   MEEPKLIGEEEE--KPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEE 60
           MEE +LIGEEEE  KPC++ENLCRKEKRKALKKIKRKQLRKE+ALK+LQEEE RLNDPEE
Sbjct: 1   MEELELIGEEEEEVKPCSVENLCRKEKRKALKKIKRKQLRKELALKRLQEEEVRLNDPEE 60

Query: 61  QRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTAR 120
           QRRI+LMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEEST R
Sbjct: 61  QRRIQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPR 120

Query: 121 QAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNP 180
           +AENENEFN EDGWEYIEGPAE+IWKGEEIILKKKLIKVPKK V PEKS EDAHRPTSNP
Sbjct: 121 EAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKSVEPEKSFEDAHRPTSNP 180

Query: 181 LPPQSEAFTDYKNAPISTRQVIED------------DKSHCPFHLKTGACRFGQRCSRIH 240
           LPPQSEAFTDYKN PIST+QVIED            DKSHCPFHLKTGACRFGQRCSRIH
Sbjct: 181 LPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIH 240

Query: 241 FYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNP-DECQGELY 269
           FYP+KSCTLLIKNMYNGPGLAWEQDEGLE+ +   + C  E Y
Sbjct: 241 FYPEKSCTLLIKNMYNGPGLAWEQDEGLEFTDEEVERCYEEFY 283

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy Swiss-Prot
Match: Q9SY74 (Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=At1g10320 PE=2 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 4.0e-63
Identity = 156/294 (53.06%), Postives = 197/294 (67.01%), Query Frame = 0


Query: 3   EPKLIGEEEEKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRI 62
           E +   E +EK   M    RKEKRKA+KK+KRKQ+RKE+A K+ +E +A+LNDP EQ R+
Sbjct: 19  EKESFEESKEKAAEMS---RKEKRKAMKKLKRKQVRKEIAAKEREEAKAKLNDPAEQERL 78

Query: 63  RLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEE----EEEEQQRRALEEESTAR 122
           + +E E+  R E+E K FEE ERAW EAME+K+KK  EE    EEEE++ + LEE     
Sbjct: 79  KAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEAKREEEERRWKDLEELRKLE 138

Query: 123 QAENENEFNGEDG-WEYI-EGPAEVIWKGEEIILKKKLIKVPKKGVA---------PEKS 182
            + N+     EDG +EYI EGP E+I++G EIILKK  ++VPKK V           E  
Sbjct: 139 ASGNDECGEDEDGEYEYIEEGPPEIIFQGNEIILKKNKVRVPKKSVVQVDGHESSNAEFV 198

Query: 183 LEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVI------------EDDKSHCPFHLKTGA 242
           L+ + RPTSNPLPP SEA  +Y+N   S +Q++            E DK+HCPFHLKTGA
Sbjct: 199 LQISDRPTSNPLPPGSEASANYQNVS-SAQQILESVAQEVPNFGTEQDKAHCPFHLKTGA 258

Query: 243 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNPDE-CQGELY 269
           CRFGQRCSR+HFYP+KSCTLL+KNMYNGPG+ WEQDEGLEY +   E C  E Y
Sbjct: 259 CRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLEYTDEEAELCYEEFY 308

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy Swiss-Prot
Match: Q6YVX9 (Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0557500 PE=2 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 8.6e-42
Identity = 109/235 (46.38%), Postives = 142/235 (60.43%), Query Frame = 0


Query: 22  RKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFE 81
           RKE+R+  KK +R++ R+E A    +  EA   DPEE+RR+R +E  E + SER R+ FE
Sbjct: 18  RKERRRERKKERRRRARREAAEAARKAAEALAADPEEERRLRELEEAEADASERARRAFE 77

Query: 82  ERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQAENENEFNGEDGWEYIE-GPAE 141
           + ER W+EA   +  + A    EE    A E+ S   + ++ N    +D WEY+E GPAE
Sbjct: 78  DAERRWLEAAAARAAEKAAAAREES--TAPEDSSREYKDDHGNGTEEDDEWEYVEDGPAE 137

Query: 142 VIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVI 201
           +IW+G EI +KKK++KVPKK                                     Q I
Sbjct: 138 IIWEGNEITVKKKMVKVPKKA---------------------------------KENQPI 197

Query: 202 EDDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 256
           + DK+HCPFHLKTGACRFG RCSR+HFYPDKSCTLL++NMY+GPGLA EQDEGLE
Sbjct: 198 QQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALEQDEGLE 217

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy Swiss-Prot
Match: Q15696 (U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Homo sapiens OX=9606 GN=ZRSR2 PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 3.2e-12
Identity = 92/259 (35.52%), Postives = 131/259 (50.58%), Query Frame = 0


Query: 12  EKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEE 71
           EK    E    K+ R ALKK KRK+ R+E+A  +L++      + EE   I   +LEEE+
Sbjct: 5   EKMTFPEKPSHKKYRAALKKEKRKKRRQELA--RLRDSGLSQKEEEEDTFIEEQQLEEEK 64

Query: 72  RSERER-KLFEE---RERAWMEAMELKKKK--MAEEEEEEQQRRALE--EESTARQAENE 131
             ERER +L EE   RE+   E   +KK+K   A++ +EEQ+R+  E  EE   ++ E E
Sbjct: 65  LLERERQRLHEEWLLREQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQRKEREEE 124

Query: 132 NEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQS 191
            +   E              K +E  L+K L +        E  LE+      NP PP  
Sbjct: 125 EQKRQEK-------------KEKEEALQKMLDQA-------ENELENG-TTWQNPEPP-- 184

Query: 192 EAFTDYKNAPISTRQVIEDDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNG 251
               D++        V+E D+++CPF+ KTGACRFG RCSR H +P  S TLLIK+M+  
Sbjct: 185 ---VDFR--------VMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTT 227

Query: 252 PGLA------WEQDEGLEY 257
            G+       ++ D  LEY
Sbjct: 245 FGMEQCRRDDYDPDASLEY 227

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy Swiss-Prot
Match: Q15695 (Putative U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 OS=Homo sapiens OX=9606 GN=ZRSR2P1 PE=5 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10
Identity = 84/251 (33.47%), Postives = 123/251 (49.00%), Query Frame = 0


Query: 18  ENLCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERER 77
           E    K+ R ALKK KRK+ R+E+A  +   +     + EE   I   +LEEE+  ERER
Sbjct: 17  EKPSHKKYRAALKKEKRKKRRQELARLR---DSGLSQEEEEDTFIEEQQLEEEKLLERER 76

Query: 78  -KLFEE---RERAWMEAMELKKKK--MAEEEEEEQQRRALEEESTARQAENENEFNGEDG 137
            +L EE   RE+   E   +KK+K   A++  EEQ+R+  E+    ++ E E E      
Sbjct: 77  ERLHEEWLLREQKAQEEFRIKKEKEEAAKKWLEEQERKLKEQWKEQQRKEREEE------ 136

Query: 138 WEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKN 197
                              ++K  +  +K  A +K L+ A     N    Q+        
Sbjct: 137 -------------------EQKQQEKKEKEEAVQKMLDQAENDLENSTTWQN------PE 196

Query: 198 APISTRQVIEDDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLA---- 257
            P+  R V+E D+++CPF+ KTGACRFG RCSR H +P  S TLLIK+M+   G+     
Sbjct: 197 PPVDFR-VMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRR 232

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy Swiss-Prot
Match: Q62377 (U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Mus musculus OX=10090 GN=Zrsr2 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09
Identity = 79/240 (32.92%), Postives = 124/240 (51.67%), Query Frame = 0


Query: 23  KEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFEE 82
           ++K  AL+K +R++ R++ AL +L+E E    + EE        L EE+R E ER L EE
Sbjct: 19  RKKYLALRKKERRKRRRQ-ALARLREAELAQKEEEED------PLAEEKRLEEERLLEEE 78

Query: 83  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQAENENEFNGEDGWEYIEGPAEVI 142
           R+R   E + L+++K    +EE + ++  EEE+  R+ E E +   E  WE  +      
Sbjct: 79  RQRLHEEWL-LREEK---AQEEFRAKKKKEEEARKRKEELERKLKAE--WEEQQ------ 138

Query: 143 WKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIED 202
            + E    ++K  +  ++  A +K L+ A     N         T     P    +V+E 
Sbjct: 139 -RKEREEEEQKRQEKREREEAVQKMLDQAENELEN-------GGTWQNPEPPMDIRVLEK 198

Query: 203 DKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLA------WEQDEGLEY 257
           D+++CPF+ KTGACRFG RCSR H +P  S TLLIK M+   G+       ++ D  LE+
Sbjct: 199 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSLEF 231

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy TrEMBL
Match: A0A1S3BUH0 (zinc finger CCCH domain-containing protein 5 OS=Cucumis melo OX=3656 GN=LOC103493302 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.7e-122
Identity = 244/291 (83.85%), Postives = 255/291 (87.63%), Query Frame = 0


Query: 1   MEEPKLIG----------EEEEKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEE 60
           MEEPKL G          EEE KPC+++NLCRKEKRKALKKIKRKQLRKE+ALK+LQEEE
Sbjct: 1   MEEPKLGGGGGGGEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQEEE 60

Query: 61  ARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRA 120
           ARLNDPEEQRR++LMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRA
Sbjct: 61  ARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRA 120

Query: 121 LEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLED 180
           LEEEST RQAENENEFN EDGWEYIEGPAE+IWKGEEIILKKKLIKVPKKGV PEKSLED
Sbjct: 121 LEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKSLED 180

Query: 181 AHRPTSNPLPPQSEAFTDYKNAPISTRQVIED------------DKSHCPFHLKTGACRF 240
           AHRPTSNPLPPQSEAFTDYKN PISTRQVIED            DKSHCPFHLKTGACRF
Sbjct: 181 AHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRF 240

Query: 241 GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNP-DECQGELY 269
           GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE+ +   + C  E Y
Sbjct: 241 GQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEFTDEEVERCYEEFY 291

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy TrEMBL
Match: A0A6J1J5M6 (zinc finger CCCH domain-containing protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111482827 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 6.2e-120
Identity = 239/286 (83.57%), Postives = 251/286 (87.76%), Query Frame = 0


Query: 1   MEEPKLIGEEE-----------EKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEE 60
           M+EP+ +GEEE           EKPC++ENLCRKEKRKALKKIKRKQLRKE ALKKLQEE
Sbjct: 1   MKEPEFVGEEEEKPQGTEAGPLEKPCSLENLCRKEKRKALKKIKRKQLRKEEALKKLQEE 60

Query: 61  EARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRR 120
           E RLNDPEE+RRIRLMELEEEERSERERKLFEERERAW+EAMELKKKKMAEEEEEEQ+RR
Sbjct: 61  EVRLNDPEEKRRIRLMELEEEERSERERKLFEERERAWLEAMELKKKKMAEEEEEEQRRR 120

Query: 121 ALEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSLE 180
           ALEEESTARQAENENE N EDGWEYIEGPAEVIWKGEEIILKKKLIK+PKKGV PEKSLE
Sbjct: 121 ALEEESTARQAENENELNEEDGWEYIEGPAEVIWKGEEIILKKKLIKIPKKGVEPEKSLE 180

Query: 181 DAHRPTSNPLPPQSEAFTDYKNAPISTRQVIED------------DKSHCPFHLKTGACR 240
           DAHRPTSNPLPPQSE FTD KNAPISTRQVI+D            DKSHCPFHLKTGACR
Sbjct: 181 DAHRPTSNPLPPQSEDFTDCKNAPISTRQVIDDVASQVPNFGTEQDKSHCPFHLKTGACR 240

Query: 241 FGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNPDEC 264
           FGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE+ +   EC
Sbjct: 241 FGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEFADEEVEC 286

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy TrEMBL
Match: A0A6J1ERZ7 (zinc finger CCCH domain-containing protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111435982 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 5.3e-119
Identity = 241/287 (83.97%), Postives = 251/287 (87.46%), Query Frame = 0


Query: 1   MEEPKLIGEEE-----------EKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEE 60
           MEEP+ +GEEE           EKPC++ENLCRKEKRKALKKIKRKQLRKE ALKKLQEE
Sbjct: 1   MEEPEFVGEEEEKPQGTEAGSIEKPCSLENLCRKEKRKALKKIKRKQLRKEEALKKLQEE 60

Query: 61  EARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMEL-KKKKMAEEEEEEQQR 120
           EARLNDPEEQRRIRLMELEEEERSERERKLFEERERAW+EAMEL KKKKMAEEEEEEQ+R
Sbjct: 61  EARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWLEAMELNKKKKMAEEEEEEQRR 120

Query: 121 RALEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSL 180
           RALEEESTARQAENENE N EDGWEYIEGPAEVIWKG+EIILKKKLIKVPKKGV PEKSL
Sbjct: 121 RALEEESTARQAENENELNEEDGWEYIEGPAEVIWKGDEIILKKKLIKVPKKGVEPEKSL 180

Query: 181 EDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIED------------DKSHCPFHLKTGAC 240
           EDAHRPTSNPLPPQSE  TD KNAPISTRQVI+D            DKSHCPFHLKTGAC
Sbjct: 181 EDAHRPTSNPLPPQSEDITDCKNAPISTRQVIDDVASQVPNFGTEQDKSHCPFHLKTGAC 240

Query: 241 RFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNPDEC 264
           RFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE+ +   EC
Sbjct: 241 RFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEFADEEVEC 287

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy TrEMBL
Match: A0A6J1C8M8 (zinc finger CCCH domain-containing protein 5 OS=Momordica charantia OX=3673 GN=LOC111008443 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 3.0e-114
Identity = 234/293 (79.86%), Postives = 243/293 (82.94%), Query Frame = 0


Query: 1   MEEPKLIGEEE------------EKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQE 60
           MEEPK  GEEE            EKPC  +NLCRKEKRKALKK+KRKQLRKEVALKKLQE
Sbjct: 1   MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQE 60

Query: 61  EEARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQR 120
           EEAR NDP+EQRRIRLMELEEEERSERERK FEERERAWME MELKKK MAEEEEEEQ+R
Sbjct: 61  EEARSNDPDEQRRIRLMELEEEERSERERKFFEERERAWMEVMELKKKNMAEEEEEEQRR 120

Query: 121 RALEEESTARQAENENEFNGEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVAPEKSL 180
             LEEESTA Q ENENEF  EDGWEYIEGPAEVIWKGEEIILKKKLIKVPKK V P+KSL
Sbjct: 121 SVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSL 180

Query: 181 EDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIED------------DKSHCPFHLKTGAC 240
           EDAHRPTSNPLPPQSEAFTDYKNA IS+RQVIED            DKSHCPFHLKTGAC
Sbjct: 181 EDAHRPTSNPLPPQSEAFTDYKNATISSRQVIEDVASQVPNFGTEQDKSHCPFHLKTGAC 240

Query: 241 RFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNP-DECQGELY 269
           RFGQRCSRIHFYPD SCTLLIKNMYNGPGLAWEQDEGLE+ +   + C  E Y
Sbjct: 241 RFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLEFTDEEVERCYEEFY 293

[Close]

BLAST of ClCG10G007450.1 vs. ExPASy TrEMBL
Match: A0A5D3BNF0 (Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00530 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.1e-114
Identity = 227/259 (87.64%), Postives = 235/259 (90.73%), Query Frame = 0


Query: 23  KEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFEE 82
           KEKRKALKKIKRKQLRKE+ALK+LQEEEARLNDPEEQRR++LMELEEEERSERERKLFEE
Sbjct: 26  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE 85

Query: 83  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTARQAENENEFNGEDGWEYIEGPAEVI 142
           RERAWMEAMELKKKKMAEEEEEEQQRRALEEEST RQAENENEFN EDGWEYIEGPAE+I
Sbjct: 86  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII 145

Query: 143 WKGEEIILKKKLIKVPKKGVAPEKSLEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVIED 202
           WKGEEIILKKKLIKVPKKGV PEKSLEDAHRPTSNPLPPQSEAFTDYKN PISTRQVIED
Sbjct: 146 WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED 205

Query: 203 ------------DKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 262
                       DKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ
Sbjct: 206 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 265

Query: 263 DEGLEYMNNP-DECQGELY 269
           DEGLE+ +   + C  E Y
Sbjct: 266 DEGLEFTDEEVERCYEEFY 284

[Close]

BLAST of ClCG10G007450.1 vs. TAIR 10
Match: AT1G10320.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 243.0 bits (619), Expect = 2.8e-64
Identity = 156/294 (53.06%), Postives = 197/294 (67.01%), Query Frame = 0


Query: 3   EPKLIGEEEEKPCTMENLCRKEKRKALKKIKRKQLRKEVALKKLQEEEARLNDPEEQRRI 62
           E +   E +EK   M    RKEKRKA+KK+KRKQ+RKE+A K+ +E +A+LNDP EQ R+
Sbjct: 19  EKESFEESKEKAAEMS---RKEKRKAMKKLKRKQVRKEIAAKEREEAKAKLNDPAEQERL 78

Query: 63  RLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEE----EEEEQQRRALEEESTAR 122
           + +E E+  R E+E K FEE ERAW EAME+K+KK  EE    EEEE++ + LEE     
Sbjct: 79  KAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEAKREEEERRWKDLEELRKLE 138

Query: 123 QAENENEFNGEDG-WEYI-EGPAEVIWKGEEIILKKKLIKVPKKGVA---------PEKS 182
            + N+     EDG +EYI EGP E+I++G EIILKK  ++VPKK V           E  
Sbjct: 139 ASGNDECGEDEDGEYEYIEEGPPEIIFQGNEIILKKNKVRVPKKSVVQVDGHESSNAEFV 198

Query: 183 LEDAHRPTSNPLPPQSEAFTDYKNAPISTRQVI------------EDDKSHCPFHLKTGA 242
           L+ + RPTSNPLPP SEA  +Y+N   S +Q++            E DK+HCPFHLKTGA
Sbjct: 199 LQISDRPTSNPLPPGSEASANYQNVS-SAQQILESVAQEVPNFGTEQDKAHCPFHLKTGA 258

Query: 243 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEYMNNPDE-CQGELY 269
           CRFGQRCSR+HFYP+KSCTLL+KNMYNGPG+ WEQDEGLEY +   E C  E Y
Sbjct: 259 CRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLEYTDEEAELCYEEFY 308

[Close]

BLAST of ClCG10G007450.1 vs. TAIR 10
Match: AT1G27650.1 (U2 snRNP auxiliary factor small subunit, putative )

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-09
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 201 EDDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 247
           E D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Sbjct: 12  EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 57

[Close]

BLAST of ClCG10G007450.1 vs. TAIR 10
Match: AT5G42820.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-09
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 201 EDDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 247
           E D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Sbjct: 12  EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 57

[Close]

BLAST of ClCG10G007450.1 vs. TAIR 10
Match: AT5G42820.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-09
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 201 EDDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 247
           E D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Sbjct: 12  EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 57

The following BLAST results are available for this feature:

BLAST of ClCG10G007450.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905961.1	3.5e-125	92.88	zinc finger CCCH domain-containing protein 5 isoform X2 [Benincasa hispida] >XP_...	[more]
XP_038905963.1	3.5e-125	92.88	zinc finger CCCH domain-containing protein 5 isoform X3 [Benincasa hispida] >XP_...	[more]
XP_008452219.1	1.4e-121	83.85	PREDICTED: zinc finger CCCH domain-containing protein 5 [Cucumis melo]	[more]
XP_031738076.1	2.6e-120	84.81	zinc finger CCCH domain-containing protein 5 isoform X3 [Cucumis sativus]	[more]
XP_004134259.1	2.6e-120	84.81	zinc finger CCCH domain-containing protein 5 isoform X2 [Cucumis sativus] >KAE86...	[more]

BLAST of ClCG10G007450.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY74	4.0e-63	53.06	Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q6YVX9	8.6e-42	46.38	Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica OX...	[more]
Q15696	3.2e-12	35.52	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related prote...	[more]
Q15695	3.0e-10	33.47	Putative U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-rela...	[more]
Q62377	1.1e-09	32.92	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related prote...	[more]

BLAST of ClCG10G007450.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUH0	6.7e-122	83.85	zinc finger CCCH domain-containing protein 5 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1J5M6	6.2e-120	83.57	zinc finger CCCH domain-containing protein 5 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1ERZ7	5.3e-119	83.97	zinc finger CCCH domain-containing protein 5 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1C8M8	3.0e-114	79.86	zinc finger CCCH domain-containing protein 5 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A5D3BNF0	5.1e-114	87.64	Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of ClCG10G007450.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10320.1	2.8e-64	53.06	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G27650.1	3.4e-09	54.35	U2 snRNP auxiliary factor small subunit, putative	[more]
AT5G42820.2	3.4e-09	54.35	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G42820.1	3.4e-09	54.35	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..123
None	No IPR available	COILS	Coil	Coil	coord: 64..84
None	No IPR available	COILS	Coil	Coil	coord: 29..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..187
None	No IPR available	PANTHER	PTHR12620:SF4	ZINC FINGER CCCH-TYPE, RNA BINDING MOTIF AND SERINE/ARGININE RICH 2	coord: 22..262
IPR009145	U2 auxiliary factor small subunit	PRINTS	PR01848	U2AUXFACTOR	coord: 226..246 score: 44.37 coord: 207..226 score: 70.0
IPR009145	U2 auxiliary factor small subunit	PANTHER	PTHR12620	U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT	coord: 22..262
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 207..226 e-value: 2.9E-5 score: 23.8
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 201..229 score: 11.826137

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G007450	ClCG10G007450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G007450.1-exon	ClCG10G007450.1-exon-CG_Chr10:10949947..10950036	exon
ClCG10G007450.1-exon	ClCG10G007450.1-exon-CG_Chr10:10950969..10951127	exon
ClCG10G007450.1-exon	ClCG10G007450.1-exon-CG_Chr10:10951323..10951421	exon
ClCG10G007450.1-exon	ClCG10G007450.1-exon-CG_Chr10:10951553..10951702	exon
ClCG10G007450.1-exon	ClCG10G007450.1-exon-CG_Chr10:10952001..10952357	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G007450.1-cds	ClCG10G007450.1-cds-CG_Chr10:10949947..10950036	CDS
ClCG10G007450.1-cds	ClCG10G007450.1-cds-CG_Chr10:10950969..10951127	CDS
ClCG10G007450.1-cds	ClCG10G007450.1-cds-CG_Chr10:10951323..10951421	CDS
ClCG10G007450.1-cds	ClCG10G007450.1-cds-CG_Chr10:10951553..10951702	CDS
ClCG10G007450.1-cds	ClCG10G007450.1-cds-CG_Chr10:10952001..10952357	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G007450.1	ClCG10G007450.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0089701	U2AF complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding