ClCG10G004460.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G004460.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	nuclear transcription factor Y subunit B-9-like
Location	CG_Chr10: 5674336 .. 5677267 (+)
Sequence length	728
RNA-Seq Expression	ClCG10G004460.2
Synteny	ClCG10G004460.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAGGGCAATTATGGAATGTGGAGGAACTGCTCAAGGAGGAGGAGATGGCTTCCATAGCTATAAAAGGCAACACCCTAAACCAACTTCTGGTATTTTTCACTCTATATTCCCCTTTTTACTCCTCTTCTCTTTTTCTTTTGCATGCAAATATTCTATATTTATAAATGCCTCTTTTGTTTTATTTTTTTGTTGCATGTATCAAAACATATATAGATCTCTTCACTTGGATCATCATTAGTGTAAATCTTGAGAATTTTAAAGGGTTTTTTTATCCATTAAAATGGTTTATTTTTTCTTTATGTATTTTGTTAATTTTGGTATTTTTTGGTGTTTTAGATGTGTATGTGTGCATGTATAAGTAAAAGCTTGAGTATTTGGTTGAGAGACAGAGAGAGAGAGAGAGAGAGTATGAAAATGGGATTCTATTCTTCTTCTCTCTCTCATTAGGCCATACCCATAGTTTTAGTTCTAAGAGGTTTTTGTTTGTTGATTATAGAGAGAGAGAGGAGAACGGGGTTGGTGGGTTTTGTGGAAGAGAGAGAGGAAGATGAAGGGTTACTTGTGTTTTTCTCCTTAAGGGTGTGGTAGTGGGATGAAACTATCACAATAGATGAAATTGCATAGAAAAAATATTAAAAGAGGCCATTACAATGGATGTGATCGACAATTATCTCAATTTATACATAATAACTTTGTTCAATGCATGTGTGGAGTGTGAAGCTAGAATTTGTCATAGATCTATAGAGATTTTAGCTTTTTTTTTTCCTTCTAAAGGTCTTGTTTGATGAGGATTTGCTTTTGAAAATTCCTTAAATCATGAAACTATCTTTCAGAATTTTGAAAACCATTCATAAACTAAAGTCATTTGTATAAATATTTGTATTCTTAGTCAAATTTGAATTTAATTTTAGTTTTTGCATTTGTAGGGGTGATAGTTTTATTATTTTATTATTATTATTATTATTATTATTATTTATTATTATTTTTTTTAAGATGAGTGAGTTGGCAGTGTTGGTGACGTGGCTAATCCAATAGTAAAAGGAAAAAAAAAAAACAAAAAAAAAAGGTGTCGTATTGTATTGCATATGACATGTTGTCTTTGTGCCAATACAAACAGTCCAAAACCTCTTGCCCTAATTCAGCCTTTTTGATTCTCCAGAACCGAACTAACTACCTGCTTTTGTTCCCTTTCCTCACTCGCCCTATGCGGCGCGTGTGCGCGTCACTCACTTTATCATCGTCATCTTCTCTAAATCCCGCCCACCAACTAGCCACCTTTCCTATCCGCTGTCTGTTTTTAGCCTCTTCCCTATTTTTTTTTTTAAATTTATTTTCCCCCATTAATATATATATTTTCATTTGGTCCCTATTATATTCTTTACTTTGTATTTTATATTGTGTGTTAAAGTTTATAAATTAATCCAAAAGAATTAAATTAATTTTAAAAATTCATATCATAATCATTTAAATTAAATAATTGAAAGTTGATGCCAAATATCAAAGGCTTTAGTACAAAAATTAAGGACCAAATAAAAACTAAAATCTAAAATCAAAATTTAAGGGTAATTGAAATATAATGTTTTGAAATTTAGGGACCAAATAGAATTAGATTATGAAAAACTTAGGAATTAAGATACTTTTTTTAGTTTTATTTAAAGTTTTTTTTTAAAAAAAAGAATTATTTTTTACAATTACAGGCCCTGTGATTTAAATTTTTTTTAACTTAACCATTCCTTATACGTTGAAGTATTTTTTTCATTTCCAATAACAAAAAAACATTTTTCTAATCCTACTTTTATGTCTTATTGTTAAGAAATTAATTCATAATAAGTTCCCATGGTACTGAGAGAGTTGAATAAAAATTTATTAGAAAAATAATGCTATTTTAAAGAAGGGAAAATTAAAATGTTGACCAAGTTTTTAGAAATTTGGAGGATGAATTAGAAACTCTCTTCTATCCACTCACAAAGTATCATACTATGTAAATAAATTAATCATCGGTCAATTTTGATATTCAACAATAAAAAGGAATAAATATAAAATGTTAAAACTTAAGAGATTAAATTGAAACATTTTTAAAATATGACTAAATAAATGTTTATTTTATACCAAATATAAAGATCAAGAGATATTAATGTTAGGGATAAATTTTTAAAAATTGCTCTAATTTGTAAACAACTAATTTTAGCCTTAGTTATATTTAAGTTTAAAGGTATATTAATGAATTGAATAAATAAATAAGGATATATATTCGTCTGATGAAACTGAATTTTTAAGCATTTGGTTTATTTAGCACTGAATATGTTGCTGACCCCAAACAAGCCAACCTCCGCCAACAACACTCCGAACAGCAACCACCACCTCTCCAACGGTGGAGCCGCCACTGGCAACTCCCCAGCAACCAGCCCCGTCCCAGTGGCGACTGCAAACAATGAGCAAAGCCAACAATGTGTGGTGCGAGAGCAAGACCAATACATGCCGATTGCTAATGTGATACGCATCATGCGGCGGATCTTGCCCTCCCATGCAAAGATATCAGACGACGCCAAAGAGACTATCCAAGAATGTGTGTCGGAGTACATCAGCTTCATAACTGGCGAGGCGAACGAGCGTTGCCAACGAGAGCAGCGCAAGACGGTAACAGCAGAGGATGTCCTTTGGGCTATGGGGAAGCTAGGTTTTGACGACTACATCGAACCGCTAACTGTTTTCCTCAACCGCTATCGTGAGTCGGAGAGTGACCGAATTCGCACTGAGCCGATTTTGAGGCGCAATGTGGATTACGGGCCACAAGTGGGGATGATGCCACCGTACGGGCAGGCATTTCAAATAGGGCACGTCCCAGCGGGGATGTTCGATGCAATGGGCGGATACTATGGCGGAGGCGGGAGCGGGGGGCCGAGCGCGGGGAATGGTAGCCAGCTTTGA

mRNA sequence

GAAGAAGGGCAATTATGGAATGTGGAGGAACTGCTCAAGGAGGAGGAGATGGCTTCCATAGCTATAAAAGGCAACACCCTAAACCAACTTCTGCACTGAATATGTTGCTGACCCCAAACAAGCCAACCTCCGCCAACAACACTCCGAACAGCAACCACCACCTCTCCAACGGTGGAGCCGCCACTGGCAACTCCCCAGCAACCAGCCCCGTCCCAGTGGCGACTGCAAACAATGAGCAAAGCCAACAATGTGTGGTGCGAGAGCAAGACCAATACATGCCGATTGCTAATGTGATACGCATCATGCGGCGGATCTTGCCCTCCCATGCAAAGATATCAGACGACGCCAAAGAGACTATCCAAGAATGTGTGTCGGAGTACATCAGCTTCATAACTGGCGAGGCGAACGAGCGTTGCCAACGAGAGCAGCGCAAGACGGTAACAGCAGAGGATGTCCTTTGGGCTATGGGGAAGCTAGGTTTTGACGACTACATCGAACCGCTAACTGTTTTCCTCAACCGCTATCGTGAGTCGGAGAGTGACCGAATTCGCACTGAGCCGATTTTGAGGCGCAATGTGGATTACGGGCCACAAGTGGGGATGATGCCACCGTACGGGCAGGCATTTCAAATAGGGCACGTCCCAGCGGGGATGTTCGATGCAATGGGCGGATACTATGGCGGAGGCGGGAGCGGGGGGCCGAGCGCGGGGAATGGTAGCCAGCTTTGA

Coding sequence (CDS)

ATGGAATGTGGAGGAACTGCTCAAGGAGGAGGAGATGGCTTCCATAGCTATAAAAGGCAACACCCTAAACCAACTTCTGCACTGAATATGTTGCTGACCCCAAACAAGCCAACCTCCGCCAACAACACTCCGAACAGCAACCACCACCTCTCCAACGGTGGAGCCGCCACTGGCAACTCCCCAGCAACCAGCCCCGTCCCAGTGGCGACTGCAAACAATGAGCAAAGCCAACAATGTGTGGTGCGAGAGCAAGACCAATACATGCCGATTGCTAATGTGATACGCATCATGCGGCGGATCTTGCCCTCCCATGCAAAGATATCAGACGACGCCAAAGAGACTATCCAAGAATGTGTGTCGGAGTACATCAGCTTCATAACTGGCGAGGCGAACGAGCGTTGCCAACGAGAGCAGCGCAAGACGGTAACAGCAGAGGATGTCCTTTGGGCTATGGGGAAGCTAGGTTTTGACGACTACATCGAACCGCTAACTGTTTTCCTCAACCGCTATCGTGAGTCGGAGAGTGACCGAATTCGCACTGAGCCGATTTTGAGGCGCAATGTGGATTACGGGCCACAAGTGGGGATGATGCCACCGTACGGGCAGGCATTTCAAATAGGGCACGTCCCAGCGGGGATGTTCGATGCAATGGGCGGATACTATGGCGGAGGCGGGAGCGGGGGGCCGAGCGCGGGGAATGGTAGCCAGCTTTGA

Protein sequence

MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL

Homology

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BLAST of ClCG10G004460.2 vs. NCBI nr
Match: XP_038905819.1 (nuclear transcription factor Y subunit B-9-like [Benincasa hispida])

HSP 1 Score: 461.8 bits (1187), Expect = 3.5e-126
Identity = 232/238 (97.48%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGGTAQGGGDGFHSYKRQHPK TSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS
Sbjct: 1   MECGGTAQGGGDGFHSYKRQHPKQTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60

Query: 61  PATSPVPVATA-NNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECV 120
           PATSP+PVATA NNEQ+QQC+VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECV
Sbjct: 61  PATSPIPVATATNNEQNQQCMVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECV 120

Query: 121 SEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIR 180
           SEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIR
Sbjct: 121 SEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIR 180

Query: 181 TEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           TEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYY GGGSGGPSAGNGSQL
Sbjct: 181 TEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYNGGGSGGPSAGNGSQL 238

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BLAST of ClCG10G004460.2 vs. NCBI nr
Match: KAE8650106.1 (hypothetical protein Csa_009480 [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 4.8e-120
Identity = 224/240 (93.33%), Postives = 229/240 (95.42%), Query Frame = 0


Query: 1   MECGGTAQ-GGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGN 60
           MECGGTAQ GGGDGFHSYKRQHPKPTS LNM+LTPNKPTS NNTPN+NHHLSNGG ATGN
Sbjct: 1   MECGGTAQGGGGDGFHSYKRQHPKPTSGLNMMLTPNKPTSINNTPNTNHHLSNGGTATGN 60

Query: 61  SPATSPVPVATA--NNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQE 120
           S ATSP+ VA    NNEQ+QQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQE
Sbjct: 61  SSATSPLSVAATANNNEQNQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQE 120

Query: 121 CVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 180
           CVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR
Sbjct: 121 CVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 180

Query: 181 IRTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           IRTEPILRRNVDYGPQVGM+ PYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL
Sbjct: 181 IRTEPILRRNVDYGPQVGMISPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 240

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BLAST of ClCG10G004460.2 vs. NCBI nr
Match: XP_023540511.1 (nuclear transcription factor Y subunit B-9-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.8 bits (1013), Expect = 5.2e-106
Identity = 200/239 (83.68%), Postives = 213/239 (89.12%), Query Frame = 0


Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGG+A GGGDGFHSY RQ PKPTSALN+LLT NK +SANNT N+NH   NG     NS
Sbjct: 1   MECGGSATGGGDGFHSYIRQQPKPTSALNVLLTANKSSSANNTHNTNHQQVNGRNLATNS 60

Query: 61  PAT--SPVPVATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120
           P T  +P  +A  NNEQSQQC+VREQDQYMPIANV RIMRRILPSHAKISDDAKETIQEC
Sbjct: 61  PVTGSTPASIAATNNEQSQQCIVREQDQYMPIANVRRIMRRILPSHAKISDDAKETIQEC 120

Query: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRI 180
           VSEYISFITGEANERCQREQRKTVT EDVLWA+GKLGFDDYIEPLTVFLNRYRESESDRI
Sbjct: 121 VSEYISFITGEANERCQREQRKTVTVEDVLWAIGKLGFDDYIEPLTVFLNRYRESESDRI 180

Query: 181 RTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           RTEPILRRNVDYGPQVGM+PPYGQ FQIGHVP+GMFDAMGGYY GGG+GG S+GNG+QL
Sbjct: 181 RTEPILRRNVDYGPQVGMVPPYGQTFQIGHVPSGMFDAMGGYYDGGGNGGASSGNGNQL 239

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BLAST of ClCG10G004460.2 vs. NCBI nr
Match: XP_022944445.1 (nuclear transcription factor Y subunit B-9-like [Cucurbita moschata])

HSP 1 Score: 394.0 bits (1011), Expect = 8.9e-106
Identity = 202/239 (84.52%), Postives = 212/239 (88.70%), Query Frame = 0


Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGG A GG DGFHSY+RQ PKPTSALN+LLT NK +SANNT NSNH  SN      NS
Sbjct: 1   MECGGAA-GGRDGFHSYRRQQPKPTSALNVLLTTNKSSSANNTHNSNHQQSNSRNVAANS 60

Query: 61  PATSPVP--VATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120
           P T  +P  +A  NNEQSQQC+VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC
Sbjct: 61  PVTGSIPASIAATNNEQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120

Query: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRI 180
           VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR+
Sbjct: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRM 180

Query: 181 RTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           RTEPILRRNVDYGPQVGM+ PYGQ FQIGHVP GMFDAMGGYY GGG+GG S+GNGSQL
Sbjct: 181 RTEPILRRNVDYGPQVGMVTPYGQTFQIGHVPIGMFDAMGGYYDGGGNGGSSSGNGSQL 238

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BLAST of ClCG10G004460.2 vs. NCBI nr
Match: XP_031738736.1 (nuclear transcription factor Y subunit B-9-like [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 3.1e-103
Identity = 196/210 (93.33%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 30  MLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA--NNEQSQQCVVREQDQY 89
           M+LTPNKPTS NNTPN+NHHLSNGG ATGNS ATSP+ VA    NNEQ+QQCVVREQDQY
Sbjct: 1   MMLTPNKPTSINNTPNTNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQY 60

Query: 90  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 149
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 150 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIG 209
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 210 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL
Sbjct: 181 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 210

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BLAST of ClCG10G004460.2 vs. ExPASy Swiss-Prot
Match: Q9SFD8 (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NFYB9 PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-47
Identity = 122/218 (55.96%), Postives = 140/218 (64.22%), Query Frame = 0


Query: 37  PTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA---NN----EQSQQCVVREQDQYMP 96
           P S    P S   L+    +   +P TS V VA A   NN    +Q   CV REQDQYMP
Sbjct: 6   PFSHYQLPKSISELNLDQHSNNPTPMTSSVVVAGAGDKNNGIVVQQQPPCVAREQDQYMP 65

Query: 97  IANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLW 156
           IANVIRIMR+ LPSHAKISDDAKETIQECVSEYISF+TGEANERCQREQRKT+TAED+LW
Sbjct: 66  IANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILW 125

Query: 157 AMGKLGFDDYIEPLTVFLNRYRESESDR---IRTEPILRRNV-------DYGPQVGMMPP 216
           AM KLGFD+Y++PLTVF+NRYRE E+DR   +R EP   R          +GP  G+ PP
Sbjct: 126 AMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLPPP 185

Query: 217 YGQAFQIGHVPAGMFDAMGGYYGGGGSG--GPSAGNGS 236
               +  G +   M    G YY  G SG    S G GS
Sbjct: 186 --GPYGYGMLDQSMVMGGGRYYQNGSSGQDESSVGGGS 221

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BLAST of ClCG10G004460.2 vs. ExPASy Swiss-Prot
Match: Q84W66 (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NFYB6 PE=1 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 1.8e-45
Identity = 101/165 (61.21%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 13  GFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATAN 72
           GFH Y++     T       TP+ P  A     +N  ++ G       P     P  T+N
Sbjct: 5   GFHGYRKLSVNNT-------TPSPPGLA-----ANFLMAEGSM----RPPEFNQPNKTSN 64

Query: 73  NEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANE 132
             + ++C VREQD++MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANE
Sbjct: 65  GGE-EECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANE 124

Query: 133 RCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 178
           RCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 125 RCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

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BLAST of ClCG10G004460.2 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-33
Identity = 81/158 (51.27%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 72  NNEQSQQCV-VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEA 131
           NN+  Q  +  REQD+++PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA
Sbjct: 15  NNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEA 74

Query: 132 NERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDY 191
           +++CQ+E+RKT+  +D+LWAM  LGF+DY+EPL V+L R+RE E +R      L R    
Sbjct: 75  SDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTG----LGR---- 134

Query: 192 GPQVGMMPPYGQAFQIGHVPAGMFDAM---GGYYGGGG 226
            PQ G           G V     DA+   GG+YGGGG
Sbjct: 135 -PQTG-----------GEVGEHQRDAVGDGGGFYGGGG 152

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BLAST of ClCG10G004460.2 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 7.9e-33
Identity = 61/96 (63.54%), Postives = 83/96 (86.46%), Query Frame = 0


Query: 81  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 140
           VREQD+++PIAN+ RIM++ +P++ KI+ DAKET+QECVSE+ISFIT EA+++CQRE+RK
Sbjct: 36  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 95

Query: 141 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESD 177
           T+  +D+LWAM  LGF+DYIEPL V+L +YRE E D
Sbjct: 96  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD 131

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BLAST of ClCG10G004460.2 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.9e-33
Identity = 61/96 (63.54%), Postives = 83/96 (86.46%), Query Frame = 0


Query: 81  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 140
           VREQD+++PIAN+ RIM++ +P++ KI+ DAKET+QECVSE+ISFIT EA+++CQRE+RK
Sbjct: 29  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 88

Query: 141 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESD 177
           T+  +D+LWAM  LGF+DYIEPL V+L +YRE E D
Sbjct: 89  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD 124

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BLAST of ClCG10G004460.2 vs. ExPASy TrEMBL
Match: A0A6J1FYN7 (nuclear transcription factor Y subunit B-9-like OS=Cucurbita moschata OX=3662 GN=LOC111448893 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.3e-106
Identity = 202/239 (84.52%), Postives = 212/239 (88.70%), Query Frame = 0


Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGG A GG DGFHSY+RQ PKPTSALN+LLT NK +SANNT NSNH  SN      NS
Sbjct: 1   MECGGAA-GGRDGFHSYRRQQPKPTSALNVLLTTNKSSSANNTHNSNHQQSNSRNVAANS 60

Query: 61  PATSPVP--VATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120
           P T  +P  +A  NNEQSQQC+VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC
Sbjct: 61  PVTGSIPASIAATNNEQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120

Query: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRI 180
           VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR+
Sbjct: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRM 180

Query: 181 RTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           RTEPILRRNVDYGPQVGM+ PYGQ FQIGHVP GMFDAMGGYY GGG+GG S+GNGSQL
Sbjct: 181 RTEPILRRNVDYGPQVGMVTPYGQTFQIGHVPIGMFDAMGGYYDGGGNGGSSSGNGSQL 238

[Close]

BLAST of ClCG10G004460.2 vs. ExPASy TrEMBL
Match: A0A1S3BKV5 (nuclear transcription factor Y subunit B-9 OS=Cucumis melo OX=3656 GN=LOC103491142 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.8e-102
Identity = 194/210 (92.38%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 30  MLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA--NNEQSQQCVVREQDQY 89
           M++TPNK TS NNTPNSNHHLSNGG ATGNS ATSP+ VA    NNEQ+QQCVVREQDQY
Sbjct: 1   MMVTPNKATSINNTPNSNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQY 60

Query: 90  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 149
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 150 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIG 209
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 210 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           HVPAGMFDAMGGYYGGGG GGPSAGNGSQL
Sbjct: 181 HVPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

[Close]

BLAST of ClCG10G004460.2 vs. ExPASy TrEMBL
Match: A0A5D3CPF3 (Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00390 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 193/210 (91.90%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 30  MLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA--NNEQSQQCVVREQDQY 89
           M++TPNK TS N+TPNSNHHLSNGG ATGNS ATSP+ VA    NNEQ+QQCVVREQDQY
Sbjct: 1   MMVTPNKATSINSTPNSNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQY 60

Query: 90  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 149
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 150 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIG 209
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 210 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           HVPAGMFDAMGGYYGGGG GGPSAGNGSQL
Sbjct: 181 HVPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

[Close]

BLAST of ClCG10G004460.2 vs. ExPASy TrEMBL
Match: A0A6J1KTC3 (nuclear transcription factor Y subunit B-3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498480 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.4e-101
Identity = 198/239 (82.85%), Postives = 207/239 (86.61%), Query Frame = 0


Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGG+A GGGDGFHSYKRQ PKPTSALN+LLT NK + ANN    NH  SNG     NS
Sbjct: 1   MECGGSA-GGGDGFHSYKRQQPKPTSALNVLLTTNKSSFANN----NHQQSNGRNIAANS 60

Query: 61  PATSP--VPVATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120
             T      +A  NN +SQQC+VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC
Sbjct: 61  LMTGSTCASIAATNNGKSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120

Query: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRI 180
           VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRE ESDRI
Sbjct: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRELESDRI 180

Query: 181 RTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           RTEPILRRNVDYGPQVGM+PPYGQ FQIGHVP GMFDAMGGYY GGG+GG S+GNGSQL
Sbjct: 181 RTEPILRRNVDYGPQVGMVPPYGQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 234

[Close]

BLAST of ClCG10G004460.2 vs. ExPASy TrEMBL
Match: A0A5A7VC19 (Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00440 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.1e-100
Identity = 192/210 (91.43%), Postives = 198/210 (94.29%), Query Frame = 0


Query: 30  MLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA--NNEQSQQCVVREQDQY 89
           M++TPNK TS N+T NSNHHLSNGG ATGNS ATSP+ VA    NNEQ+QQCVVREQDQY
Sbjct: 1   MMVTPNKATSINSTLNSNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQY 60

Query: 90  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 149
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 150 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIG 209
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 210 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           HVPAGMFDAMGGYYGGGG GGPSAGNGSQL
Sbjct: 181 HVPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

[Close]

BLAST of ClCG10G004460.2 vs. TAIR 10
Match: AT1G21970.1 (Histone superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-48
Identity = 122/218 (55.96%), Postives = 140/218 (64.22%), Query Frame = 0


Query: 37  PTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA---NN----EQSQQCVVREQDQYMP 96
           P S    P S   L+    +   +P TS V VA A   NN    +Q   CV REQDQYMP
Sbjct: 6   PFSHYQLPKSISELNLDQHSNNPTPMTSSVVVAGAGDKNNGIVVQQQPPCVAREQDQYMP 65

Query: 97  IANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLW 156
           IANVIRIMR+ LPSHAKISDDAKETIQECVSEYISF+TGEANERCQREQRKT+TAED+LW
Sbjct: 66  IANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILW 125

Query: 157 AMGKLGFDDYIEPLTVFLNRYRESESDR---IRTEPILRRNV-------DYGPQVGMMPP 216
           AM KLGFD+Y++PLTVF+NRYRE E+DR   +R EP   R          +GP  G+ PP
Sbjct: 126 AMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLPPP 185

Query: 217 YGQAFQIGHVPAGMFDAMGGYYGGGGSG--GPSAGNGS 236
               +  G +   M    G YY  G SG    S G GS
Sbjct: 186 --GPYGYGMLDQSMVMGGGRYYQNGSSGQDESSVGGGS 221

[Close]

BLAST of ClCG10G004460.2 vs. TAIR 10
Match: AT5G47670.2 (nuclear factor Y, subunit B6 )

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-47
Identity = 87/106 (82.08%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 72  NNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEAN 131
           +N   ++C VREQD++MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEAN
Sbjct: 18  SNGGEEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEAN 77

Query: 132 ERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 178
           ERCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 78  ERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 123

[Close]

BLAST of ClCG10G004460.2 vs. TAIR 10
Match: AT5G47670.1 (nuclear factor Y, subunit B6 )

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-46
Identity = 101/165 (61.21%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 13  GFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATAN 72
           GFH Y++     T       TP+ P  A     +N  ++ G       P     P  T+N
Sbjct: 5   GFHGYRKLSVNNT-------TPSPPGLA-----ANFLMAEGSM----RPPEFNQPNKTSN 64

Query: 73  NEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANE 132
             + ++C VREQD++MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANE
Sbjct: 65  GGE-EECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANE 124

Query: 133 RCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 178
           RCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 125 RCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

[Close]

BLAST of ClCG10G004460.2 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 81/158 (51.27%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 72  NNEQSQQCV-VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEA 131
           NN+  Q  +  REQD+++PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA
Sbjct: 15  NNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEA 74

Query: 132 NERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDY 191
           +++CQ+E+RKT+  +D+LWAM  LGF+DY+EPL V+L R+RE E +R      L R    
Sbjct: 75  SDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTG----LGR---- 134

Query: 192 GPQVGMMPPYGQAFQIGHVPAGMFDAM---GGYYGGGG 226
            PQ G           G V     DA+   GG+YGGGG
Sbjct: 135 -PQTG-----------GEVGEHQRDAVGDGGGFYGGGG 152

[Close]

BLAST of ClCG10G004460.2 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-33
Identity = 61/96 (63.54%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 81  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 140
           VREQD+Y+PIAN+ RIM++ LP + KI  DAK+T+QECVSE+ISFIT EA+++CQ+E+RK
Sbjct: 19  VREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRK 78

Query: 141 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESD 177
           TV  +D+LWAM  LGF+DY+EPL ++L RYRE E D
Sbjct: 79  TVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGD 114

The following BLAST results are available for this feature:

BLAST of ClCG10G004460.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905819.1	3.5e-126	97.48	nuclear transcription factor Y subunit B-9-like [Benincasa hispida]	[more]
KAE8650106.1	4.8e-120	93.33	hypothetical protein Csa_009480 [Cucumis sativus]	[more]
XP_023540511.1	5.2e-106	83.68	nuclear transcription factor Y subunit B-9-like isoform X2 [Cucurbita pepo subsp...	[more]
XP_022944445.1	8.9e-106	84.52	nuclear transcription factor Y subunit B-9-like [Cucurbita moschata]	[more]
XP_031738736.1	3.1e-103	93.33	nuclear transcription factor Y subunit B-9-like [Cucumis sativus]	[more]

BLAST of ClCG10G004460.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFD8	1.5e-47	55.96	Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84W66	1.8e-45	61.21	Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FGJ3	2.7e-33	51.27	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q60EQ4	7.9e-33	63.54	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]
P25209	7.9e-33	63.54	Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1	[more]

BLAST of ClCG10G004460.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYN7	4.3e-106	84.52	nuclear transcription factor Y subunit B-9-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3BKV5	3.8e-102	92.38	nuclear transcription factor Y subunit B-9 OS=Cucumis melo OX=3656 GN=LOC1034911...	[more]
A0A5D3CPF3	1.4e-101	91.90	Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1KTC3	2.4e-101	82.85	nuclear transcription factor Y subunit B-3-like isoform X2 OS=Cucurbita maxima O...	[more]
A0A5A7VC19	2.1e-100	91.43	Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of ClCG10G004460.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21970.1	1.1e-48	55.96	Histone superfamily protein	[more]
AT5G47670.2	4.5e-47	82.08	nuclear factor Y, subunit B6	[more]
AT5G47670.1	1.3e-46	61.21	nuclear factor Y, subunit B6	[more]
AT5G47640.1	1.9e-34	51.27	nuclear factor Y, subunit B2	[more]
AT2G38880.2	2.1e-33	63.54	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 134..152 score: 32.06 coord: 115..133 score: 43.9 coord: 153..171 score: 31.46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..77
None	No IPR available	PANTHER	PTHR11064:SF115	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9	coord: 58..203
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 74..188 e-value: 1.1E-40 score: 140.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 84..177
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 88..151 e-value: 3.0E-25 score: 88.3
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 58..203
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 118..134

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G004460	ClCG10G004460	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G004460.2-exon	ClCG10G004460.2-exon-CG_Chr10:5674336..5674428	exon
ClCG10G004460.2-exon	ClCG10G004460.2-exon-CG_Chr10:5676633..5677267	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G004460.2-five_prime_utr	ClCG10G004460.2-five_prime_utr-CG_Chr10:5674336..5674349	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G004460.2-cds	ClCG10G004460.2-cds-CG_Chr10:5674350..5674428	CDS
ClCG10G004460.2-cds	ClCG10G004460.2-cds-CG_Chr10:5676633..5677267	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G004460.2	ClCG10G004460.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding