ClCG10G004040.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG10G004040.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionBEST Arabidopsis thaliana protein match is: embryo defective 1303 .
LocationCG_Chr10: 5106010 .. 5115377 (+)
Sequence length1174
RNA-Seq ExpressionClCG10G004040.1
SyntenyClCG10G004040.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCCTTTCTTCTTCCTGCCTCTATCTCAAAAGAGTCGTCGCCAGGGGCTCACCGCCATATCTCTCGGTAGCGAGGCCTTTCAGAATCTCTCCTTCTCTCTCTCGAAAGCATTCCGACATTACGCATTTTCGATACTTTGCAGAGACGAAGCGCGTCTGTCGTATCTCAAAAGGTTCGGGTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTTATGTTTTGCTTCTTCGTATTGATAGTTTCCCGCTATTACACCTTGGAAAGATTATGATGTTGTTTATGTTTATGTTTATGGTTGTGGAGATTGTAAGTTCTCGTGGTAAAGCCCATTTATTCTTCTTTGCTTTATATTCTTGTTGAATCCGAAGGGGTATTCTAGTTCTAGTATTCGTGTTGATATTTCGGAATAAATAGAAGTGGGGTTCTATGCGAACTTAGAGTCATTGCTTGAATGTAAGAATTTCCGCCTGACCTAACGGATCTGGTTACTTGAAGATGCTTTTGCTTTTATATATTATTTCGGAATACGACTCTATTTAATTTTGCGGATTTTTTTTTAGGATCTGGTTACTTGAAGATGCTTTTGCTTTTATATATTATTTCGGAATACGACTCTATTTAATTTTGCGGATTTTTTTTTGACTTTTGTGTTGAGGGAAATCATTTGGGGTGGAAATTCTTCCTGTAACATTTTGGCTGGGAAGCCGGCCCCTCGTAGCGGGGAATTTCTTGGTATGGGGAATGCTTTAGTGCAAGAGTGAGGAGGGGGGATGGGCAAGCCATTTCAACTCCTCTATGGAGGTGAGATACTCCTTTTGAGGGTTTTTCTTGGTGTAAATAATTTCTGTATATATGAAAAATGTATGAAATAATGACAAATTTAAGAAATTAGAGTTTGATTACAATTACAAGAAAAGTTGATTATAATTTTAAAGAAAATTCAAAGAGATAAAAGTTACCTAGTCAAGCTCGATTAAATTGAAACCAAATTGAACTTATGAATTGGACCAAGCTAATCTGTACTTGATACTTGATAGGTTTGGTTTGGTTCTCTACCCAATGTCTAGGACTATTATGGGTTGTCCTAGTGGTCAATAAGAGCCCATGTAGAGAGCAAATGACTCATAGGAAACGAGTTCAAGTGATGGTGGCTAGCTACTTCAGATTTCATATCTTGAATTACCTTGGTAACCCAGTTCAAATCTAATAGGATTAGATAGGTGTTTTGTAAGGATAGTAAGAGTGTAAGTTGGTATGGACACTCACAAATATTAAGGAAAAAAACCCCCAATCTTTGGTCTCAACTGGACTTCTGTTCCTTGCGGTTCAAAAGAACTAATTCTAATTCAAACCAATAAAACAGTGGCATTTTAGAAAACCTTTGGATATTTGTTTTTTAAAGTTCACGAAACAGCCCACCAAGTCCATAGAAATTAGAAAGGTGTGAGTTAGAGCTAGTATGTTTGGCATGTATGGGGGTTACCTCGTTATCTAAATTCATAGAAATATTCATATCTTGTGACTTTGAAGATTGTAATGTGAGAAGCCTTTTATTTTATTTCGGGGATATCTTGTTAGTGGTTCAAAATAAATTATATTCACCAAAGAAAATTGAACTGAACCAATTGTAATGTAATTATGTAATATAAATTATATGTTAAATTACAAGTTTAGTCTTTCAATTTTTAAGTTTGTGTTTATTTGGTTCCTGAACATTAGTAAGTGTCTAATATGTCTCAAAATTGATAGTTCAGAGGTCTATTAGACATTTTTTAAAGTTCAAAACCAAATTTCATAAAACTGAAAGTTCAGGGATAAACTTAAACTGAACTTTTAGTTTAAAGTTTAGGGATAAACTTATAATTTAAGTTGTAATTCGAGCATTAGTCTCGTTTCATTATTTCAATGAAAAGTTATGTTTCCATTAAAAAAAGACTTGTAATTTAAGTTGTTTAACCTAAATTATATAACTATATGAAGAATTTTCTTTTTTGAAAGGTATAATTCTTCTAAAATCACTCTCAAGTCTCAATTGAATATATGAAAATATTAAAAAAAAATCTCCATCTTAACCTTTTATGAATGAAAAGAACCCCAAGAACCCTAATGTTTTCTTATCTCACCCTTTTAGCCAGTTCTATTGACAGACCTTCCTTGCCTCCTTTGTCGTTGTTGCCTTTCCTCTTCCGACTCTTTCAGCCTCCCACGGAATCTTCTTTTGAATCAATTGATTCAATTCTGATATCATCCTTTCAATTCCCTGCTGGTTGTCGCTGTTGTACCATCCTTGTTGGTCTTCTCTCAGTATTTCTAACTAACCATAAGGTAAATGACCTTCCCTCTCTTCCTCAATGGTTGCCTCTGCTTTTCAAAACAGAAAGTTGATATATCGATCGGTTAATTCCTTTCAATCTGGTTTGGGCAGAAGCTTGGTTCTTATATGGACATATTTAATGGAGAGAGGGTGTTTCTACAGGGCGTTTCTTCTGGAAAGTGGGGCGGCTTACTTTAATTAGATCTGTGTTGAGTGGTATCCTTGTCTACTTTTTCTCCCTTTTTAGAGATCCTTGCAAGGTGTGTTAAAGTTTGGAGAAGTTGATGCGATCACTGGGAAGGGGTTGAAGAAGGAAAAGGGAAAGGTTCGCATTCAATTAGATGGGAGGTTATTGAGAGGCCTGTTGATGTGGGTGGGTTAGAGCTTGGGAATCTAAGAACTCGCAACAAATCTTTGTTTGCTAAATGCCTTTGGTGTTTCACCCTTGAACCTAGATCCCTCTAACATAGGATTATTGTTAGTAAACATGGGCCCCACCCTTTCGAGTGGCTATTTGAAGGGGTAAAAGGCTCTCACCGGAACTTGTGGTAGATTATTTCGAAGGAGCTCCCTGTTTTTGTTCAATTTGTCTGCCATGTGGTGGGAGAGGGGAGAGAAACTTAATTCTTGGGAAGACCATTGGGTGGGGGAGAGGCCTCTCTGTTTCTTGTTCCCCCATACGTATCATTTGTCGGATCTCAAAAACCATTTTGTTGCTGATTTTCTTTTGTGGTCTAGGAGCACATATTCCTTCTCTTTTGGGTTCCATCGTGCTATTTCCAATAGGAAAACGACGGAGGTGATTGATCTTCTTTCCTTACTTGAGGGCCACCCTTTTAGGCGTGGGAGAATAGATGTGAGGTTTTGGAATCCTGATCCTTTGGAGGGATTCTTGTACAAGTCTTTCTTTCGTAAGTTGATTGACCCTTCTCCCCTAGGAGTGTCTATCTTTTCGGTGCTATGGAGGATTAATATATGCGAAAATCAACCAATGACTAATTAAATTAGATTTTTTCCTGCGGTTTATATCTACTGTGTAGCTTCTCAATCTCCTCCTCCCTCCTGCTGTCAGGCAAGTCAGGGCCTCATTGTATCAGTTAGCTCCCTTTATTTATTTTTAAAGTATTCAGTTTGGTCACCTTGTTATGGGGCCCATACTTGTCAAAGCGATCCTATAGGGTTCCTAACTTTCTAGGAGGCTTTTGGATAGAATTTTCTGTTTTGAATAAGCATCCCGAAGATCTTCCAGTGCTTGACTTCAACAATTTCTGGGTTCGGTTTCTAGCCTGCTTTCTGACAGCAGCTCTAGAGTTTAGGGATTTGATTCCTTTCTTGTACTTTTCATCCAATTAGTGGAAGTCTTATAAACCATACCCCCCAACTTCCCTAACTGTGCAACGCATAGGGTTCAAATTAACAATTTTTTTAGTCCTTTGGTATTGCTTTATTCTTATTTTTACATCCTTAATTTCATAACATGCAGTCTTTTAAGTTGCAACATGTAATTAGGAAATTCAATTATTCTCATTTTATTGGTGATTTCATCTCAGAAATTCTTGTTATGGTGTCAGGTTATCATCCACTCTTGTAGATGGAGATGCTTACTACAAATTCTGGTGCCATGCTACCTCTTCTACCCCCAGGTACAACCAACTAATTTCCTTAATGTTTATTGGTTTGATGTAAAGCGGAAATGAATGGTTTTACTTATAACTAAAAGAAAAAAGACGAGTACAAGAGAAGGAAAGCAGGATAATGCATTTCCCCTATCCCTAGTTCGATTGGAGAAGTAAGTTAATGTCAGACTTCCTACTATGTCACTCGACTCACTACAGCATGAGGTGCTGTACTGTATGCAATCCAAGAAATTGTTAAAAGTTCCGAAGATATCTTGCAGGATTATTACTATTTTTTTCAATCTAAAGTTGGCCATAAAATAGCTTTGGAAGGAATTCCATGTAGAACTCTACCTTTCTTTTCAGCCATCAGCCCACTTAAACTTCTGAAAATGAGGGATTTCACATCATTCAGGAATCTCTAAGAACCATTTTTTTATGAGGAAGATAGGATTATAATTTCATTGATAGTATGAAATTACAAAAGGGCAGTAAATGCCCTGAGGTATTACATAATGCTGTACCATTGTGAAATGAGAGATGTAAGGGTTTAGGCCATAAATTTGACATTAAAAATTCCAGCTTTTAGTGGCAACTCAGTAGAGGAATAGATGGTCTATATGGGGAAAAGTTGACTTGTGTAGACCCCTTTCTAATCAGGTTAGCTATGTTGCTGAGGTTGAGGTTGGGGTTTTTGTTTAGTTAGGTAGACAAGAGCAGACTTGCAAGTGTATGCCCTCAAATTATCAAAATTCTGCAAGGAGATGTTACATGCTCTTGTACTAATAATACCTATAGTGGTTTATTAAGTTCGGGAACAAATCATTTAGTTGGTATAGATCCACATACACCCAAGCAATCTGATTGTGGAGATTACATTTCTGTTCACTGTGCTCAGTGTGTTTATACGAAAGAAGGATCTATATAAATATATATATATATATATATATATATTGTGTGTGTGTGTGTGTGAATAAATAAATTTTATTGACAGTAATAGATAACTGTGGTAGAAACAATTGTTTCTCGTGCTTGAAGCTGGCTCTTGTCTCACATGGATACATGTATGTGGTACAGTCAAGTCACAGTTTTTCATGGTTTTGAGATCCCGATATTTAGTGAGCTGATGTACATTGGAAAATCTATCAATAGACCATAACATCTTGATCACTCTTTGGAATATATATTTATTGGCACTCGGTTGATTGGACAGTCAATTTTCATTAATGGTTGCTAATTGTGATAAATTAATATTTGTTAAATGCTCAATCTTCGTAACATATATGTACTTTTCACGTAACCCTATGTTGTCCTCCATGCTTTTAATTTTCAAAATATTTCGCTCAGACTAAAAAATGAATTTAATTAGCTTATGTGACGAAGACCATTGTAGTTACATAGTTTCTTATGCAGTTAAAAAGATATTGGTTATTGTTTAAATTAATCTTCTATTACCATTAATTCAAATTTTTTTTTGATCTTTAGTTGTGATATTGTCTTTGTAAAATAGTGGGTCAGCACTGGAGAAGAATGAAGGCCAAAGACTTCCCTCTTAGACGGTATAGTTCCCAACTTCAAACTCCTAATGGGAGGAGGCAATCAGTGTTTGCTAAAGCAGGACCTGTATTTCTCAATCCAATTCCATCTACTGGGACGAAGGGAGGTGTTCTATGTTCTAGTAGAAAGAACAATGCTTTCATATGTTTTGCTGCTTTGGTAAGTTGGTTTTTATTAATTGATTTCTCTGTTAGAACTGGTAATAATTTTTTATATCAGAGGCATTATTGTACAACCTTAAGCTTAGATGCCAAGGGATATTTTCTAAAGGCTTCCCAATTTGTTGAAATGAGTTGGGGAATTTGGATGGTGAGGAATCATAGAATTTTCAGAGGGGGAGACGTATGTGAAGGAGTTGTTCCCTTGATTTGCGTCTTGATGGTCAAGGTCTTTTGTCATTATTAGTTGTGCCTGATTCTTTTAGATTAGAGCTCCTTTTTGTATTTCTTTGGCTCTGTCCTTTTTATGTCCCTGCAAATGATAAACCTGGATTTATCTAGCAATAGAGGTGCTGAGTCAAGGGAAGATTCAGAGAGCTTCCCCTCTCTCCCAAACACAATTCTCACAAAATGACTTGAGCAAGAAGATACCTCTCCAGCTCTTTCTTTCTCCCTATATAATTCTTGACTCATTGGCTATGTCTATTCAATGTTTTAAAAAGCTATTGAGGCTTATGCCTTGAGGCTTGCTCGAGGCAAGACTCTAACTTTTAGTCTTGAGACTTGTGCCTTTGTTGAACCATGAGAGGCTTACACCTCTATAAAAGCACATTGAGGCTGAAAATCTCTACACCTCCTCTTATAGTAAGAAAAATAATAGTGTGATTTGCCTATTACCCTTTTTCTGCTATGACTTCAGAACATTGAAAATGAAGATAAAAACTTTAGTATAACTCAATCCTATTAATGATAATAGTAGTGAAGTTAAAGATCTCCTTTTAGAATTTTTATTGAGTGAAAATTGCATGGGTGTATCTTTTACACTATTATATGACTATCACGCTTAACAATACTTGGTTATACTAGTTTAGGATTTGTTAAATGTTCTTAATTCAATTTGAGGCTTATGCCTTGCCTCTTCCTGATGAAAAGCTTCAAGGTCGCTTTAGCCCTTCAAAACATTGCTTCTATTACATTCTCATGGACCCACCCTCCCGAGTCCTAACTTGTAACAAGGGCTATTGCCCACTCTCATTCCTCATGCTTGTTTCATATTTTTCAATGAAAGCTTGGTTTCTTGTTATAAAAAAAAAAAAAAAGGAAAAATAATGGTTGAAACGAGAAATAGTTGAAGCCACATTAATTTCTTAGTTACCTAATTAATTAGTTTCTGCCTGAATGAGTGTTTGAAGCAACATAACAGACTGGTGGTGGACTGTTGAAATGGATTTGAGTTTTTGTTAAGTAATCAATTATAAAGAATTAAATAGGTTTTTCGACATAGTTAAAAGACTTAAACAGAATATTTGAAAAAGAGACTAAAAAGCAAAAATATGTCTAATGGTGCGGTCCCTCTGCAGAATGCTAGANTCTTTGTAAAATAGTGGGTCAGCACTGGAGAAGAATGAAGGCCAAAGACTTCCCTCTTAGACGGTATAGTTCCCAACTTCAAACTCCTAATGGGAGGAGGCAATCAGTGTTTGCTAAAGCAGGACCTGTATTTCTCAATCCAATTCCATCTACTGGGACGAAGGGAGGTGTTCTATGTTCTAGTAGAAAGAACAATGCTTTCATATGTTTTGCTGCTTTGGTAAGTTGGTTTTTATTAATTGATTTCTCTGTTAGAACTGGTAATAATTTTTTATATCAGAAGCATTATTGTACAACCTTAAGCTTAGATGCCAAGGGATATTTTCTAAAGGCTTCCCAATTTGTTGAAATGAGTTGGGGAATTTGGATGGTGAGGAATCATAGAATTTTCAGAGGGGGAGACGTATGTGAAGGAGTTGTTCCCTTGATTTGCGTCTTGATGGTCAAGGTCTTTTGTCATTATTAGTTGTGCCTGATTCTTTTAGATTAGAGCTCCTTTTTGTATTTCTTTGGCTCTGTCCTTTTTATGTCCCTGCAAATGATAAACCTGGATTTATCTAGCAATAGAGGTGCTGAGTCAAGGGAAGATTCAGAGAGCTTCCCCTCTCTCCCAAACACAATTCTCACAAAATGACTTGAGCAAGAAGATACCTCTCCAGCTCTTTCTTTCTCCCTATATAATTCTTGACTCATTGGCTATGTCTATTCAATGTTTTAAAAAGCTATTGAGGCTTATGCCTTGAGGCTTGCTCGAGGCAAGACTCTAACTTTTAGTCTTGAGACTTGTGCCTTTGTTGAACCATGAGAGGCTTACACCTCTATAAAAGCACATTGAGGCTGAAAATCTCTACACCTCCTCTTATAGTAAGAAAAATAATAGTGTGATTTGCCTATTACCCTTTTTCTGCTATGACTTCAGAACATTGAAAATGAAGATAAAAACTTTAGTATAACTCAATCCTATTAATGATAATAGTAGTGAAGTTAAAGATCTCCTTTTAGAATTTTTATTGAGTGAAAATTGCATGGGTGTATCTTTTACACTATTATATGACTATCACGCTTAACAATACTTGGTTATACTAGTTTAGGATTTGTTAAATGTTCTTAATTCAATTTGAGGCTTATGCCTTGCCTCTTCCTGATGAAAAGCTTCAAGGTCGCTTTAGCCCTTCAAAACATTGCTTCTATTACATTCTCATGGACCCACCCTCCCGAGTCCTAACTTGTAACAAGGGCTATTGCCCACTCTCATTCCTCATGCTTGTTTCATATTTTTCAATGAAAGCTTGGTTTCTTGTTATAAAAAAAAAAAAAAAGGAAAAATAATGGTTGAAACGAGAAATAGTTGAAGCCACATTAATTTCTTAGTTACCTAATTAATTAGTTTCTGCCTGAATGAGTGTTTGAAGCAACATAACAGACTGGTGGTGGACTGTTGAAATGGATTTGAGTTTTTGTTAAGTAATCAATTATAAAGAATTAAATAGGTTTTTCGACATAGTTAAAAGACTTAAACAGAATATTTGAAAAAGAGACTAAAAAGCAAAAATATGTCTAATGGTGCGGTCCCTCTGCAGAATGCTAGATGTGCAGCGGAGCAGACACAGACCGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCTGGTAACAATCACTTGCAGATTTTATGAATAATAGTAACTTTTAGCTTCAATCTTCCTAGCAGTAAGTTGCATATGCACATATTATCATCATGTAACCAGAACACCAAACATGCCTCATGATGTTCTTACCTATTTGTCTCGCTCTCTCCCTAACACGCAGCCTTGTCCTAGGCTATCATAGTGTTGGTTGTTGCTAAGCCTTGCTATTAAAACGAAAATTGCAGGCAAGGAGAAGTCACCGCAACTGGATGATGGTGATTCTGGATTTCCACCTCGTGATGATGGTGATGGTGGCGGAGGTGGCGGCGGCGGTGGAGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGCTTCCTTGCTTTCCTAGGCTTTCTAAAAGATAAAGAAAGCGAAGGGCCATATCAGAATGATCGGAGAAGATAAATATACTTTGATCAAATATATATGTAGATTCTAGATTTATACTTGGATAAAATCTCAAAATAAATGTTTGTTTCCAGTCATGTTAAATCTCCATTTAATTTCTTTCATCCCGTCGTCTTTAATTCGGTTTTCCCTGTGGATTGGCGTAAGAACACAAAGTTCTCAAAGATCTCATTTGGAATTTCAGCTATGAAAGATATAACTGGTGAAGGTAAAAGCTGACGAGTTTGACTTGTACTATCAACTTGGC

mRNA sequence

TGCCCTTTCTTCTTCCTGCCTCTATCTCAAAAGAGTCGTCGCCAGGGGCTCACCGCCATATCTCTCGGTAGCGAGGCCTTTCAGAATCTCTCCTTCTCTCTCTCGAAAGCATTCCGACATTACGCATTTTCGATACTTTGCAGAGACGAAGCGCGTCTGTCGTATCTCAAAAGGTTATCATCCACTCTTGTAGATGGAGATGCTTACTACAAATTCTGGTGCCATGCTACCTCTTCTACCCCCAGTTGTGATATTGTCTTTCACTGGAGAAGAATGAAGGCCAAAGACTTCCCTCTTAGACGGTATAGTTCCCAACTTCAAACTCCTAATGGGAGGAGGCAATCAGTGTTTGCTAAAGCAGGACCTGTATTTCTCAATCCAATTCCATCTACTGGGACGAAGGGAGGTGTTCTATGTTCTAGTAGAAAGAACAATGCTTTCATATGTTTTGCTGCTTTGCACTGGAGAAGAATGAAGGCCAAAGACTTCCCTCTTAGACGGTATAGTTCCCAACTTCAAACTCCTAATGGGAGGAGGCAATCAGTGTTTGCTAAAGCAGGACCTGTATTTCTCAATCCAATTCCATCTACTGGGACGAAGGGAGGTGTTCTATGTTCTAGTAGAAAGAACAATGCTTTCATATGTTTTGCTGCTTTGAATGCTAGATGTGCAGCGGAGCAGACACAGACCGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCTGGCAAGGAGAAGTCACCGCAACTGGATGATGGTGATTCTGGATTTCCACCTCGTGATGATGGTGATGGTGGCGGAGGTGGCGGCGGCGGTGGAGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGCTTCCTTGCTTTCCTAGGCTTTCTAAAAGATAAAGAAAGCGAAGGGCCATATCAGAATGATCGGAGAAGATAAATATACTTTGATCAAATATATATGTAGATTCTAGATTTATACTTGGATAAAATCTCAAAATAAATGTTTGTTTCCAGTCATGTTAAATCTCCATTTAATTTCTTTCATCCCGTCGTCTTTAATTCGGTTTTCCCTGTGGATTGGCGTAAGAACACAAAGTTCTCAAAGATCTCATTTGGAATTTCAGCTATGAAAGATATAACTGGTGAAGGTAAAAGCTGACGAGTTTGACTTGTACTATCAACTTGGC

Coding sequence (CDS)

TGCCCTTTCTTCTTCCTGCCTCTATCTCAAAAGAGTCGTCGCCAGGGGCTCACCGCCATATCTCTCGGTAGCGAGGCCTTTCAGAATCTCTCCTTCTCTCTCTCGAAAGCATTCCGACATTACGCATTTTCGATACTTTGCAGAGACGAAGCGCGTCTGTCGTATCTCAAAAGGTTATCATCCACTCTTGTAGATGGAGATGCTTACTACAAATTCTGGTGCCATGCTACCTCTTCTACCCCCAGTTGTGATATTGTCTTTCACTGGAGAAGAATGAAGGCCAAAGACTTCCCTCTTAGACGGTATAGTTCCCAACTTCAAACTCCTAATGGGAGGAGGCAATCAGTGTTTGCTAAAGCAGGACCTGTATTTCTCAATCCAATTCCATCTACTGGGACGAAGGGAGGTGTTCTATGTTCTAGTAGAAAGAACAATGCTTTCATATGTTTTGCTGCTTTGCACTGGAGAAGAATGAAGGCCAAAGACTTCCCTCTTAGACGGTATAGTTCCCAACTTCAAACTCCTAATGGGAGGAGGCAATCAGTGTTTGCTAAAGCAGGACCTGTATTTCTCAATCCAATTCCATCTACTGGGACGAAGGGAGGTGTTCTATGTTCTAGTAGAAAGAACAATGCTTTCATATGTTTTGCTGCTTTGAATGCTAGATGTGCAGCGGAGCAGACACAGACCGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCTGGCAAGGAGAAGTCACCGCAACTGGATGATGGTGATTCTGGATTTCCACCTCGTGATGATGGTGATGGTGGCGGAGGTGGCGGCGGCGGTGGAGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGCTTCCTTGCTTTCCTAGGCTTTCTAAAAGATAAAGAAAGCGAAGGGCCATATCAGAATGATCGGAGAAGATAA

Protein sequence

CPFFFLPLSQKSRRQGLTAISLGSEAFQNLSFSLSKAFRHYAFSILCRDEARLSYLKRLSSTLVDGDAYYKFWCHATSSTPSCDIVFHWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRKNNAFICFAALHWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR
Homology
[Close]
BLAST of ClCG10G004040.1 vs. NCBI nr
Match: XP_008448993.1 (PREDICTED: uncharacterized protein LOC103490999 [Cucumis melo] >XP_016900649.1 PREDICTED: uncharacterized protein LOC103490999 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 2.3e-74
Identity = 144/154 (93.51%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 154 HWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRKNNAF 213
           HW RMKAKD PLRRYSSQ QTPNGRRQS+FAKAGPVFL PIPSTGTKGG+LCSSRKN+ F
Sbjct: 21  HWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTF 80

Query: 214 ICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 273
           IC AALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG
Sbjct: 81  ICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 140

Query: 274 GNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GNWSGGFFFFGFLAFLGFLKDKESEGPYQ+DRRR
Sbjct: 141 GNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 174

[Close]
BLAST of ClCG10G004040.1 vs. NCBI nr
Match: XP_038905031.1 (protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida] >XP_038905032.1 protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida] >XP_038905033.1 protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 4.9e-72
Identity = 144/154 (93.51%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 154 HWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRKNNAF 213
           H  RMKAKD  LRRYSSQLQT NGRRQSVFAKAGPVFL PIPSTG KGG LCSSR+NNAF
Sbjct: 21  HRGRMKAKDLSLRRYSSQLQTLNGRRQSVFAKAGPVFLKPIPSTGMKGGDLCSSRRNNAF 80

Query: 214 ICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 273
           +CFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG
Sbjct: 81  MCFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 140

Query: 274 GNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR
Sbjct: 141 GNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 174

[Close]
BLAST of ClCG10G004040.1 vs. NCBI nr
Match: XP_038905028.1 (uncharacterized protein LOC120091196 isoform X1 [Benincasa hispida] >XP_038905029.1 uncharacterized protein LOC120091196 isoform X1 [Benincasa hispida] >XP_038905030.1 uncharacterized protein LOC120091196 isoform X1 [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 4.9e-72
Identity = 144/154 (93.51%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 154 HWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRKNNAF 213
           H  RMKAKD  LRRYSSQLQT NGRRQSVFAKAGPVFL PIPSTG KGG LCSSR+NNAF
Sbjct: 38  HRGRMKAKDLSLRRYSSQLQTLNGRRQSVFAKAGPVFLKPIPSTGMKGGDLCSSRRNNAF 97

Query: 214 ICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 273
           +CFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG
Sbjct: 98  MCFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 157

Query: 274 GNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR
Sbjct: 158 GNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 191

[Close]
BLAST of ClCG10G004040.1 vs. NCBI nr
Match: TYK19389.1 (uncharacterized protein E5676_scaffold443G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 6.4e-72
Identity = 141/150 (94.00%), Postives = 145/150 (96.67%), Query Frame = 0 

Query: 158 MKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRKNNAFICFA 217
           MKAKD PLRRYSSQ QTPNGRRQS+FAKAGPVFL PIPSTGTKGG+LCSSRKN+ FIC A
Sbjct: 1   MKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLA 60

Query: 218 ALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWS 277
           ALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWS
Sbjct: 61  ALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWS 120

Query: 278 GGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GGFFFFGFLAFLGFLKDKESEGPYQ+DRRR
Sbjct: 121 GGFFFFGFLAFLGFLKDKESEGPYQDDRRR 150

[Close]
BLAST of ClCG10G004040.1 vs. NCBI nr
Match: XP_023553392.1 (uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553393.1 uncharacterized protein LOC111810820 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023553394.1 uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 1.0e-69
Identity = 142/155 (91.61%), Postives = 146/155 (94.19%), Query Frame = 0 

Query: 154 HWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRK-NNA 213
           HW +MKAKDF LRR S QLQTPNGRRQSV AKAGPVFL PIPSTGTKGGVL S+RK NNA
Sbjct: 21  HWGKMKAKDFLLRRDSVQLQTPNGRRQSVIAKAGPVFLKPIPSTGTKGGVLYSTRKNNNA 80

Query: 214 FICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGG 273
           FICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGG
Sbjct: 81  FICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGG 140

Query: 274 GGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GGNWSGGFFFFGFLAFLGFLKDKESEG Y++DRRR
Sbjct: 141 GGNWSGGFFFFGFLAFLGFLKDKESEGAYEDDRRR 175

[Close]
BLAST of ClCG10G004040.1 vs. ExPASy Swiss-Prot
Match: Q0E3V2 (Protein YELLOW LEAF 1, choloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=YL1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.0e-08
Identity = 44/99 (44.44%), Postives = 56/99 (56.57%), Query Frame = 0 

Query: 215 CFAALNARCAAEQTQTVTRE------APTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGG 274
           C A++   C A QTQT  R+      +P    +  K +SP+LDDG +GFPP   G GGGG
Sbjct: 58  CEASMRITCCANQTQTARRKSFSGPTSPPSGSVKEKVRSPKLDDGGTGFPPFRFGGGGGG 117

Query: 275 GGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GGGGG N +GGF  F  +  L +L  +E E   QN  RR
Sbjct: 118 GGGGGSNSAGGFILFVIVLLLDYL--REFERNLQNGTRR 154

[Close]
BLAST of ClCG10G004040.1 vs. ExPASy Swiss-Prot
Match: F1SZ44 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.7e-08
Identity = 44/98 (44.90%), Postives = 54/98 (55.10%), Query Frame = 0 

Query: 205 CSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPR 264
           C S K          + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP 
Sbjct: 34  CISFKREVSAKAVLRSVRCNATQTQSAQRKSSTATVKRSDPKGKTQGPKLDDGSGGFPPF 93

Query: 265 DDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE 297
             G GGGGGGGGGG  N+ GGF  F  +  L +LK+ E
Sbjct: 94  RFGKGGGGGGGGGGGSNYFGGFLLFTCVLLLDYLKEFE 131

[Close]
BLAST of ClCG10G004040.1 vs. ExPASy Swiss-Prot
Match: F1SZ42 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 44/98 (44.90%), Postives = 54/98 (55.10%), Query Frame = 0 

Query: 205 CSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPR 264
           C S K          + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP 
Sbjct: 34  CISFKREVSAKAVLRSVRCNATQTQSAQRKSSTATVKRSDPKGKIQGPKLDDGSGGFPPF 93

Query: 265 DDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE 297
             G GGGGGGGGGG  N+ GGF  F  +  L +LK+ E
Sbjct: 94  RFGKGGGGGGGGGGGSNYFGGFLLFTCVLLLDYLKEFE 131

[Close]
BLAST of ClCG10G004040.1 vs. ExPASy Swiss-Prot
Match: F1SZ41 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RF2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 44/98 (44.90%), Postives = 54/98 (55.10%), Query Frame = 0 

Query: 205 CSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPR 264
           C S K          + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP 
Sbjct: 34  CISFKREVSAKAVLRSVRCNATQTQSAQRKSSTATVKRSDPKGKIQGPKLDDGSGGFPPF 93

Query: 265 DDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE 297
             G GGGGGGGGGG  N+ GGF  F  +  L +LK+ E
Sbjct: 94  RFGKGGGGGGGGGGGSNYFGGFLLFTCVLLLDYLKEFE 131

[Close]
BLAST of ClCG10G004040.1 vs. ExPASy TrEMBL
Match: A0A1S4DXD8 (uncharacterized protein LOC103490999 OS=Cucumis melo OX=3656 GN=LOC103490999 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 144/154 (93.51%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 154 HWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRKNNAF 213
           HW RMKAKD PLRRYSSQ QTPNGRRQS+FAKAGPVFL PIPSTGTKGG+LCSSRKN+ F
Sbjct: 21  HWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTF 80

Query: 214 ICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 273
           IC AALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG
Sbjct: 81  ICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 140

Query: 274 GNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GNWSGGFFFFGFLAFLGFLKDKESEGPYQ+DRRR
Sbjct: 141 GNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 174

[Close]
BLAST of ClCG10G004040.1 vs. ExPASy TrEMBL
Match: A0A5D3D747 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00210 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 3.1e-72
Identity = 141/150 (94.00%), Postives = 145/150 (96.67%), Query Frame = 0 

Query: 158 MKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRKNNAFICFA 217
           MKAKD PLRRYSSQ QTPNGRRQS+FAKAGPVFL PIPSTGTKGG+LCSSRKN+ FIC A
Sbjct: 1   MKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLA 60

Query: 218 ALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWS 277
           ALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWS
Sbjct: 61  ALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWS 120

Query: 278 GGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GGFFFFGFLAFLGFLKDKESEGPYQ+DRRR
Sbjct: 121 GGFFFFGFLAFLGFLKDKESEGPYQDDRRR 150

[Close]
BLAST of ClCG10G004040.1 vs. ExPASy TrEMBL
Match: A0A6J1F258 (uncharacterized protein LOC111438781 OS=Cucurbita moschata OX=3662 GN=LOC111438781 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69
Identity = 141/155 (90.97%), Postives = 145/155 (93.55%), Query Frame = 0 

Query: 154 HWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRK-NNA 213
           HW +MK KDF LRR S QLQTPNGRRQSV AKAGPVFL PIPSTGTKGGVL S+RK NNA
Sbjct: 21  HWGKMKGKDFLLRRDSVQLQTPNGRRQSVIAKAGPVFLKPIPSTGTKGGVLYSTRKNNNA 80

Query: 214 FICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGG 273
           FICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGG
Sbjct: 81  FICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGG 140

Query: 274 GGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GGNWSGGFFFFGFLAFLGFLKDKESEG Y++DRRR
Sbjct: 141 GGNWSGGFFFFGFLAFLGFLKDKESEGAYEDDRRR 175

[Close]
BLAST of ClCG10G004040.1 vs. ExPASy TrEMBL
Match: A0A6J1HQC3 (uncharacterized protein LOC111465127 OS=Cucurbita maxima OX=3661 GN=LOC111465127 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69
Identity = 140/155 (90.32%), Postives = 144/155 (92.90%), Query Frame = 0 

Query: 154 HWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRK-NNA 213
           HW +MK KDF LRR S QLQTPNGRRQSV AKAGPVFL PIPSTGTKGG L S+RK NNA
Sbjct: 21  HWGKMKVKDFLLRRDSVQLQTPNGRRQSVIAKAGPVFLKPIPSTGTKGGFLYSTRKNNNA 80

Query: 214 FICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGG 273
           FICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGG
Sbjct: 81  FICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGG 140

Query: 274 GGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GGNWSGGFFFFGFLAFLGFLKDKESEG Y++DRRR
Sbjct: 141 GGNWSGGFFFFGFLAFLGFLKDKESEGSYEDDRRR 175

[Close]
BLAST of ClCG10G004040.1 vs. ExPASy TrEMBL
Match: A0A0A0L2P2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G044530 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69
Identity = 137/154 (88.96%), Postives = 141/154 (91.56%), Query Frame = 0 

Query: 154 HWRRMKAKDFPLRRYSSQLQTPNGRRQSVFAKAGPVFLNPIPSTGTKGGVLCSSRKNNAF 213
           HW RMKA + PLR YSSQ QTPN RR S+ AKAGPVFL PIPST TKGGVLCSSRKNNAF
Sbjct: 21  HWGRMKANNLPLRWYSSQHQTPNSRRLSMVAKAGPVFLKPIPSTRTKGGVLCSSRKNNAF 80

Query: 214 ICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 273
           ICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG
Sbjct: 81  ICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGG 140

Query: 274 GNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
           GNWSGGFFFFGFLAFLG LKDKE +G Y+NDRRR
Sbjct: 141 GNWSGGFFFFGFLAFLGLLKDKEEDGSYENDRRR 174

[Close]
BLAST of ClCG10G004040.1 vs. TAIR 10
Match: AT1G56200.1 (embryo defective 1303 )

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-33
Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0 

Query: 191 LNPIPSTGTKGGVLCSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSP 250
           ++P+ + G   G+   SR+ +  IC +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP
Sbjct: 39  VSPLSAVGLSSGL--GSRRKSLLICHSAINAKCSEGQTQTVTRESPTITQAPVHSKEKSP 98

Query: 251 QLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
            LDDG  GFPPRDDGD GGGGGGGGGNWSGGFFFFGFLAFLG LKDKE E  Y+  RRR
Sbjct: 99  SLDDGGDGFPPRDDGD-GGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR 154

[Close]
BLAST of ClCG10G004040.1 vs. TAIR 10
Match: AT1G56200.2 (embryo defective 1303 )

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-33
Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0 

Query: 191 LNPIPSTGTKGGVLCSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSP 250
           ++P+ + G   G+   SR+ +  IC +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP
Sbjct: 36  VSPLSAVGLSSGL--GSRRKSLLICHSAINAKCSEGQTQTVTRESPTITQAPVHSKEKSP 95

Query: 251 QLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 308
            LDDG  GFPPRDDGD GGGGGGGGGNWSGGFFFFGFLAFLG LKDKE E  Y+  RRR
Sbjct: 96  SLDDGGDGFPPRDDGD-GGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR 151

[Close]
BLAST of ClCG10G004040.1 vs. TAIR 10
Match: AT1G30475.1 (BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 148 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 14; Metazoa - 63; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 2.8e-25
Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0 

Query: 203 VLCSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPR 262
           V+ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPR
Sbjct: 90  VVVSKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR 149

Query: 263 DDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE 299
           DDG GGGGGGGGGG+ SGGFF FGFL F+G+LKD E E
Sbjct: 150 DDG-GGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGE 186

[Close]
BLAST of ClCG10G004040.1 vs. TAIR 10
Match: AT1G30475.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 2.8e-25
Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0 

Query: 203 VLCSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPR 262
           V+ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPR
Sbjct: 61  VVVSKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR 120

Query: 263 DDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE 299
           DDG GGGGGGGGGG+ SGGFF FGFL F+G+LKD E E
Sbjct: 121 DDG-GGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGE 157

[Close]
BLAST of ClCG10G004040.1 vs. TAIR 10
Match: AT1G30475.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 2.8e-25
Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0 

Query: 203 VLCSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPR 262
           V+ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPR
Sbjct: 61  VVVSKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR 120

Query: 263 DDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE 299
           DDG GGGGGGGGGG+ SGGFF FGFL F+G+LKD E E
Sbjct: 121 DDG-GGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGE 157

The following BLAST results are available for this feature:
BLAST of ClCG10G004040.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008448993.12.3e-7493.51PREDICTED: uncharacterized protein LOC103490999 [Cucumis melo] >XP_016900649.1 P... [more]
XP_038905031.14.9e-7293.51protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida] >XP_03... [more]
XP_038905028.14.9e-7293.51uncharacterized protein LOC120091196 isoform X1 [Benincasa hispida] >XP_03890502... [more]
TYK19389.16.4e-7294.00uncharacterized protein E5676_scaffold443G00210 [Cucumis melo var. makuwa][more]
XP_023553392.11.0e-6991.61uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
BLAST of ClCG10G004040.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0E3V23.0e-0844.44Protein YELLOW LEAF 1, choloroplastic OS=Oryza sativa subsp. japonica OX=39947 G... [more]
F1SZ446.7e-0844.90Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX... [more]
F1SZ421.1e-0744.90Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX... [more]
F1SZ411.1e-0744.90Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. indica OX=3... [more]
BLAST of ClCG10G004040.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DXD81.1e-7493.51uncharacterized protein LOC103490999 OS=Cucumis melo OX=3656 GN=LOC103490999 PE=... [more]
A0A5D3D7473.1e-7294.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1F2581.4e-6990.97uncharacterized protein LOC111438781 OS=Cucurbita moschata OX=3662 GN=LOC1114387... [more]
A0A6J1HQC35.4e-6990.32uncharacterized protein LOC111465127 OS=Cucurbita maxima OX=3661 GN=LOC111465127... [more]
A0A0A0L2P25.4e-6988.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G044530 PE=4 SV=1[more]
BLAST of ClCG10G004040.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G56200.11.2e-3364.71embryo defective 1303 [more]
AT1G56200.21.2e-3364.71embryo defective 1303 [more]
AT1G30475.12.8e-2565.31BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G5620... [more]
AT1G30475.22.8e-2565.31FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT1G30475.32.8e-2565.31FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..271
NoneNo IPR availablePANTHERPTHR34938:SF1PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIALcoord: 190..306
IPR040299Protein FERTILITY RESTORER RF2-likePANTHERPTHR34938PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIALcoord: 190..306

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG10G004040ClCG10G004040gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG10G004040.1-exonClCG10G004040.1-exon-CG_Chr10:5106010..5106182exon
ClCG10G004040.1-exonClCG10G004040.1-exon-CG_Chr10:5109927..5109998exon
ClCG10G004040.1-exonClCG10G004040.1-exon-CG_Chr10:5111457..5111472exon
ClCG10G004040.1-exonClCG10G004040.1-exon-CG_Chr10:5111490..5111687exon
ClCG10G004040.1-exonClCG10G004040.1-exon-CG_Chr10:5113080..5113277exon
ClCG10G004040.1-exonClCG10G004040.1-exon-CG_Chr10:5114638..5114707exon
ClCG10G004040.1-exonClCG10G004040.1-exon-CG_Chr10:5114931..5115377exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG10G004040.1-cdsClCG10G004040.1-cds-CG_Chr10:5106010..5106182CDS
ClCG10G004040.1-cdsClCG10G004040.1-cds-CG_Chr10:5109927..5109998CDS
ClCG10G004040.1-cdsClCG10G004040.1-cds-CG_Chr10:5111457..5111472CDS
ClCG10G004040.1-cdsClCG10G004040.1-cds-CG_Chr10:5111490..5111687CDS
ClCG10G004040.1-cdsClCG10G004040.1-cds-CG_Chr10:5113080..5113277CDS
ClCG10G004040.1-cdsClCG10G004040.1-cds-CG_Chr10:5114638..5114707CDS
ClCG10G004040.1-cdsClCG10G004040.1-cds-CG_Chr10:5114931..5115127CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG10G004040.1-three_prime_utrClCG10G004040.1-three_prime_utr-CG_Chr10:5115128..5115377three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG10G004040.1ClCG10G004040.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0010027 thylakoid membrane organization
cellular_component GO:0009507 chloroplast