ClCG10G001430.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G001430.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr10: 1496737 .. 1501220 (-)
Sequence length	711
RNA-Seq Expression	ClCG10G001430.1
Synteny	ClCG10G001430.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGCAATTACGCATAGTGGGATACAAGTACCAGGGCCATTGCAGAGAATCTGCAACAAAACAAAACTGGTCAAAGCAAACACACACAACAATAGGTTCTATACACCAATAGAGGTCATGTAATTTGTAGATTTATAGAAAGAAGAAATACCACTTGAGGTCTAATTTTGAGCATTAGCCAGAGTGCATGCAATGTGGCAATTAAAGTTGTCCAAACAGAAGTGAAATATGATTGTCCTACTTCCCTACTTCTGTAGATCTGCATAAACTGTGCAATCTTGTCTACCTCAGCCCCAGTCTGCAATAAGTGCCAATTCAGAAACAAGTTTAACAGCATAAACACCCAAATATATTGTTAGAACTGGAACCTAGTTTAACAGTATTGACATCACTCCTCTTGAAGTCAAAGGTTCAAATCTTGATACCTATATTTGTTGAACTCAAAAGAAAGAGAAAAGGGGTAAACATACTATTATCATTGATGGCAGCATCCATAATATGATCTATAAGAGAAAAATTATACAAAAAAAAAAAAAAAAAAAAAAAAGACTTTATCAATCTAAGTTTCAGGTGTCGTTTCCTGGAAGCTGAGAATTAAAGGAGACAGTAACTTACTATATGAAGAAAACTAACTAGCTCGAGCTGGGATGATAGCCCTGCTACTGATTGACAAAGTTCCAAGAGAATCCATCCTATTACTAATTTTCTAAAAGTGTTTCCTAAACCAAGTGTAATACGATGCATGTGAGAAGCCTAAGTCGAAGTTGAACTCAAGCAACAAAATCCCAACTGAGTTGATTCAAGTTTGTGGACCAAATCTGAAAGAAAATTTACTTTGATCTCCATTGTGCTATTACTGGTTATTTTGTATTGAATGTGTGCTTCTAACATGCAGTATTTGCCCCTAGTTGAAAGAATTTGCCACTGGGTCTAGTAGAAAATCATTGTGTGTCAGCCACTGAAATTTGCAAAAACTCCAAAATCACCCGGAGCTCCACCTCGTAGCCATTATCATAAATCTTCTTAAACTAGCTTGAATGATCCTTTGACTTAAGTTTTTAACGAACTATTAGTCTAGAAACTTATTCCCTCGCTAATAAATTCACACTCCTCCTATTCTACTTATTCTCTATTTCATGGCTACATATTCTTCTGGCCAAGGACTGGTCCTAAATTTCAACTACTAAATATGCTTATTTATTTGCTTTTTGTACTTTACTTTTAAGAGAAAAACATGTAGTTTGAGTGTCTGATTCGTAAAATATCACTAATTCCTAGGTAGAGTGAACTCTCCAATTCTTGAACACTTTTTTTCACCAGAATTCAAGTCATGGTTCTCAAGGATCAGTCTAACCTCTTCCGTCTGTCCATTTGTTAGTGATTGATCATATGATCTAGATTGAAGCTAAGGTCCTACCATCCAGAATTCAAGTTATGGTCCTCGAGGGTCAGTCAACTTCTTCCATCTGTCCATTTGTTAGTGACTGATAATATGATCTAGATTGAAGCTAAGGTCCTATCTTCTTGGAACCAAAGTGCAAAACATTTTTTATTGAACTAATGAATATATATATATATATATATATACACAAACTCCTTTCGTTGTTTCATTGAATGGAACCTTGGTCTTAAGACTTGTGGATGGTCTTAATGTTTCTTTTTCTCCTTGAAGTTTAAAATGCGAGTTTCCTGTATTTTGATTGTTTTCAGATCCCAAATAAAGCATTATTTCACTACAAATTAGTTTATTTCTATGCAAAGTTTAAATTCTATCAAATTTTTGAAGTTTTCGTGCGAGTTTCCTGTATTTTGATTGTTTTCAGATCCCAAATAAAGCATTATTTCACTACAAATTAGTTTATTTCTATGCAAAGTTTAAATTCTATCAAATTTTTGAAGTTTTCTTTAGCATGCATGTAGAGCAAATCCCTTTTTCTTTTTGGAACAAGATACAAAACTTTTCATTGAAAAGAATGTGTCGGCAATCCTATTTAGAATGTGCCTTGGAAGCTGAGTCATACATGGTGTTTATCTTTTACCTCCTATCAGTGGTGATTAGTCATTTAAGAAACAAGGTTGAGAATTCTCATTTCAACACCTAATATATGTGCATTTTATCTTTTACCTCCCATCAGTGGTGGACTAAACTTTCAATGTCCATCTTCAAGGGGATAATATTTTTATCCTTAAACAGAATTCCTTCTTGCTTCAGTTCTATGCTTGTAGAACAGTATCAAGCCTGTTCACACTGAAGGCAGCATTTAATAAACAATGCACAAAGCAAGAGCCAAATTTTTCTCTGCACCACTAGAGTAGGTTACAACAGAGGTAGAACAAAGAATGAAGGAGGGGACAACTGCCCCCACTTATTTTGTCTTGATTTTCTTTTTATATTTATTATAAAAATAAATAATAATAAATAAATAAAAGATTAAGCTTTTAGAATTTTCCCTCTAATTTACCCGAGGGTATCTAAGATTATTCCCGTCCTTATAAATAATTTTGGCTCCACCAAGGGGCCACAGTCACCAGCTTTACATTTCTATCACTTTGCTAAAATTTTAAGGATCATCTTCATTTTAGGGAACCCAGCCTCAGTTCAAGTTCCACAACCCAAAGCAACACGTAGACTAATATCCCCACTGTCCTACCCAATAGAGCTTCTAGTTTGTCATAAGATTGGCAACTGAAACACCCTGCTCATGCCATCCCCTCACCTTTCCTCACTCAGACAAGAGAAGTTGGAAGACCTTGAAAGCGTACCTTATCAGCCAGTTGGTTCTCATACGTACGAGCTTTTTGAAGACTCATGTTATCAGTAGCAGCAGCAATGTAGAATCTTGGAGAAAACAAGTCTTTCTGCAGCACAGACAACACATTGAGCATCTCCGCCGTGTGACCTCCTACATATCCAACAATCAGGGCAATTACATGATTAAATCTACAAGTCAATGAAATTGATGGCTATCTGACCTGAGCCTAAAACAATGAGGGTACTAACAGGTCCCAAGCTTTTGTTTCGAAGTGGTCTACCACTCCAATATATAACGTAAAGAACACGGCTCAAAATCAAGCTGATACTGAGAATTACAGTCGCGATAGTAACACTAGAATCCATCAAGGGAAGCAAAAGCACAATTCCTGCCAGAAAGCGAGAGAAAGAAGAAACTCAATAAAGTAGAATAGAGATTAGAAGAGGTTATACTGCCTTGATTTTCTCCTATACTATAATTGAAATAAAAACTCACATAATCAATATTAGAATTCAGAGTTTTATGTAACCCCACCAAACTTCAAGTTGCATCGACCTCTATCTATTTTAACCCAGGGCCTCAACACTTTCTACACAATTTTTTTGGATAAGAACAGTTTCTACCCAATTCAATGTTAACACTTGACCATTTTTACCTAAAGCCTCGAACTGCGCATTGCACCTTGACCATTATTACCCAAGGTGCACCAATGACTTAGCAACATATTAGTCCTTCCCTAGGTTCTTCACTACTTGCTTCCATAGCTCATCACATCGACCCTTGACATTTTTACCCAACACCTCGATGCTCCATTAGCACAGTGACATATCAACCCCTTGACCATTTTTACTCAAGATGCATTGATATTCACCTTACTTTTCTTTCTCGTTAACTCTAGGTTGCCCAACTCTTTTCACTAATTAGGCTCACAATCTATATCATATTTTCTAGACATGCATTTATCCCAATAACCATATGAACATGATCTTGATACAAACACAATGCCTAATATCACAACATGCTTCATCATCACAAAAAAAAAAAAAATAAATAAATAAATAATAAAAAATAAAAAAACCACTCAACATGCTTTAATCACATCAGAACTCATAATCAATTTATAATGGCATTCAATTGATAATGTTTATCAAGCAAGTCACACCGGGCATACAAATATACAACGAACAATAAGCAGACTCAACAAGTGAGAACTCCTTATTGTAAATGCTTCTAAAGTAATCTGAAAGTACCTACATAAGAAAGATGATTTCCAAAGTTAGACTCTAAACTAGTATCCTTTAATCAAGCAAAGGATGAATAGGAGAGGATTACCAAGTAATCTTATCCAAACACCTTAAACGCTTTTAAGACTTGTTCGATCAGTCGACGAGTTTCCAAAAGTTAGAACCTAATTCACAGCTTAAAACAAATCCAAAAATGTCTTGAACGAGCCGTCGCACTGATTCTTACCGAAAGGCTCGGGTATTCAGATCTGAGTACCCAATCTGAGGTCACTCGAAGTGTGAGCTTTCGAATCTAAATCGGAATGGCTCGTTTGCGAGTGGTTGTCCACTAACGCAAGGAGGTGTTCGCGCCGTCGACAATCTGTCCGTCGTCGTGGATGCAGGTTGTGGCGTCGAGAGAATCGCACGCTGCTGCTTGACTAGATCCGCCGGAGAATTCGACGCCGCTCGTGACTTGTCGCACGCCGTCCCGCAAGGAGGTTGA

mRNA sequence

ATGAATGCAATTACGCATAGTGGGATACAAGTACCAGGGCCATTGCAGAGAATCTGCAACAAAACAAAACTGGTCAAAGCAAACACACACAACAATAGGTTCTATACACCAATAGAGGTCATATTGAAGCTAAGGTCCTACCATCCAGAATTCAAGTTATGGTCCTCGAGGGGAACCCAGCCTCAGTTCAAGTTCCACAACCCAAAGCAACACTTTGTCATAAGATTGGCAACTGAAACACCCTGCTCATGCCATCCCCTCACCTTTCCTCACTCAGACAAGAGAAGTTGGAAGACCTTGAAAGCGTACCTTATCAGCCAGTTGGTTCTCATACGTACGAGCTTTTTGAAGACTCATGTTATCAGTAGCAGCAGCAATGTAGAATCTTGGAGAAAACAAGTCTTTCTGCAGCACAGACAACACATTGAGCATCTCCGCCGTGTGACCTCCTACATATCCAACAATCAGGGCAATTACATGATTAAATCTACAAGTCACTCGAAGTGTGAGCTTTCGAATCTAAATCGGAATGGCTCGTTTGCGAGTGGTTGTCCACTAACGCAAGGAGGTGTTCGCGCCGTCGACAATCTGTCCGTCGTCGTGGATGCAGGTTGTGGCGTCGAGAGAATCGCACGCTGCTGCTTGACTAGATCCGCCGGAGAATTCGACGCCGCTCGTGACTTGTCGCACGCCGTCCCGCAAGGAGGTTGA

Coding sequence (CDS)

ATGAATGCAATTACGCATAGTGGGATACAAGTACCAGGGCCATTGCAGAGAATCTGCAACAAAACAAAACTGGTCAAAGCAAACACACACAACAATAGGTTCTATACACCAATAGAGGTCATATTGAAGCTAAGGTCCTACCATCCAGAATTCAAGTTATGGTCCTCGAGGGGAACCCAGCCTCAGTTCAAGTTCCACAACCCAAAGCAACACTTTGTCATAAGATTGGCAACTGAAACACCCTGCTCATGCCATCCCCTCACCTTTCCTCACTCAGACAAGAGAAGTTGGAAGACCTTGAAAGCGTACCTTATCAGCCAGTTGGTTCTCATACGTACGAGCTTTTTGAAGACTCATGTTATCAGTAGCAGCAGCAATGTAGAATCTTGGAGAAAACAAGTCTTTCTGCAGCACAGACAACACATTGAGCATCTCCGCCGTGTGACCTCCTACATATCCAACAATCAGGGCAATTACATGATTAAATCTACAAGTCACTCGAAGTGTGAGCTTTCGAATCTAAATCGGAATGGCTCGTTTGCGAGTGGTTGTCCACTAACGCAAGGAGGTGTTCGCGCCGTCGACAATCTGTCCGTCGTCGTGGATGCAGGTTGTGGCGTCGAGAGAATCGCACGCTGCTGCTTGACTAGATCCGCCGGAGAATTCGACGCCGCTCGTGACTTGTCGCACGCCGTCCCGCAAGGAGGTTGA

Protein sequence

MNAITHSGIQVPGPLQRICNKTKLVKANTHNNRFYTPIEVILKLRSYHPEFKLWSSRGTQPQFKFHNPKQHFVIRLATETPCSCHPLTFPHSDKRSWKTLKAYLISQLVLIRTSFLKTHVISSSSNVESWRKQVFLQHRQHIEHLRRVTSYISNNQGNYMIKSTSHSKCELSNLNRNGSFASGCPLTQGGVRAVDNLSVVVDAGCGVERIARCCLTRSAGEFDAARDLSHAVPQGG

Homology

The following BLAST results are available for this feature:

BLAST of ClCG10G001430.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G001430.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G001430.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G001430.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G001430	ClCG10G001430	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G001430.1-exon	ClCG10G001430.1-exon-CG_Chr10:1496737..1496954	exon
ClCG10G001430.1-exon	ClCG10G001430.1-exon-CG_Chr10:1498271..1498550	exon
ClCG10G001430.1-exon	ClCG10G001430.1-exon-CG_Chr10:1498593..1498634	exon
ClCG10G001430.1-exon	ClCG10G001430.1-exon-CG_Chr10:1499771..1499819	exon
ClCG10G001430.1-exon	ClCG10G001430.1-exon-CG_Chr10:1501099..1501220	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G001430.1-cds	ClCG10G001430.1-cds-CG_Chr10:1496737..1496954	CDS
ClCG10G001430.1-cds	ClCG10G001430.1-cds-CG_Chr10:1498271..1498550	CDS
ClCG10G001430.1-cds	ClCG10G001430.1-cds-CG_Chr10:1498593..1498634	CDS
ClCG10G001430.1-cds	ClCG10G001430.1-cds-CG_Chr10:1499771..1499819	CDS
ClCG10G001430.1-cds	ClCG10G001430.1-cds-CG_Chr10:1501099..1501220	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G001430.1	ClCG10G001430.1-protein	polypeptide