ClCG05G007640.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G007640.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	BHLH domain-containing protein
Location	CG_Chr05: 8133011 .. 8133899 (+)
Sequence length	660
RNA-Seq Expression	ClCG05G007640.1
Synteny	ClCG05G007640.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCCTTTCAATGATCCTTCTCATCATGATTATCAAACCCCTCTCCAAAATCTCTTTGCTTCTCAACTAATTTCACCCCCAGCAGCAAGCAGTAGTGATCTTAATACCAACAAAATTGAAATTATCACTCAAAATGAAGAGAGGAAGATTATGCACAGAGATGTCGAACGAGAAAGAAGAAAACAAATGGCCTCTCTTCTCATCAACCTCCGATCTTTGCTTCCTCTTGAATTTATAAAGGTAATGTAAATTAAAAAAAGAAAAAAAAAAGAAAAAGAAAAGAAATCATCTTTTTGCTTCATTTACCTTGTCTTTTTTTCGATTATATTTATGCAATTATTTTAAACCTTGGATGTTGTGGGGATTTTAGGGTAGGCGTACGAGGGCTGATATTGTTGATGAGGCTGTGAATTATATTGAACATTTAAGAGGGAAAATCAGTGAACTTCATGTTAAAAGAGATGCAACAATAAAGAGGCTGAATTTGGAATCCTCAAGTTGCAACAATCAAAGATGCAATCTTGCGTCTCCATGTTGTGTTGTAATTAAGCCATATTCAGGTGGGTTGGAGATTGCAATAAGTAATTGCATTACAGAGGAAAATTTTCAACTTTCAGGAGTGATGAGGGTTTTGCTTGAACACAACATTCAAATTGAAAGTTGTGCTTCTACTAAAGTAAATGATCAAAGGATGTTGCACACCGTTCAGACAAAGGTTGTTGCTTGATTGGAGGATTTGGATCTTTTTATTATTATTATTATTTTTTATTTTAGAGGGTGATTTTATCTTATGTTGATTGATTTTGTTTTTCAGGTTGATGATTCAATCAAGATTGATCTGCATGAACTGGAACAAAAACTATATGAAGTTTGCAATTCTGAGTGA

mRNA sequence

ATGTTTCCTTTCAATGATCCTTCTCATCATGATTATCAAACCCCTCTCCAAAATCTCTTTGCTTCTCAACTAATTTCACCCCCAGCAGCAAGCAGTAGTGATCTTAATACCAACAAAATTGAAATTATCACTCAAAATGAAGAGAGGAAGATTATGCACAGAGATGTCGAACGAGAAAGAAGAAAACAAATGGCCTCTCTTCTCATCAACCTCCGATCTTTGCTTCCTCTTGAATTTATAAAGGGTAGGCGTACGAGGGCTGATATTGTTGATGAGGCTGTGAATTATATTGAACATTTAAGAGGGAAAATCAGTGAACTTCATGTTAAAAGAGATGCAACAATAAAGAGGCTGAATTTGGAATCCTCAAGTTGCAACAATCAAAGATGCAATCTTGCGTCTCCATGTTGTGTTGTAATTAAGCCATATTCAGGTGGGTTGGAGATTGCAATAAGTAATTGCATTACAGAGGAAAATTTTCAACTTTCAGGAGTGATGAGGGTTTTGCTTGAACACAACATTCAAATTGAAAGTTGTGCTTCTACTAAAGTAAATGATCAAAGGATGTTGCACACCGTTCAGACAAAGGTTGATGATTCAATCAAGATTGATCTGCATGAACTGGAACAAAAACTATATGAAGTTTGCAATTCTGAGTGA

Coding sequence (CDS)

ATGTTTCCTTTCAATGATCCTTCTCATCATGATTATCAAACCCCTCTCCAAAATCTCTTTGCTTCTCAACTAATTTCACCCCCAGCAGCAAGCAGTAGTGATCTTAATACCAACAAAATTGAAATTATCACTCAAAATGAAGAGAGGAAGATTATGCACAGAGATGTCGAACGAGAAAGAAGAAAACAAATGGCCTCTCTTCTCATCAACCTCCGATCTTTGCTTCCTCTTGAATTTATAAAGGGTAGGCGTACGAGGGCTGATATTGTTGATGAGGCTGTGAATTATATTGAACATTTAAGAGGGAAAATCAGTGAACTTCATGTTAAAAGAGATGCAACAATAAAGAGGCTGAATTTGGAATCCTCAAGTTGCAACAATCAAAGATGCAATCTTGCGTCTCCATGTTGTGTTGTAATTAAGCCATATTCAGGTGGGTTGGAGATTGCAATAAGTAATTGCATTACAGAGGAAAATTTTCAACTTTCAGGAGTGATGAGGGTTTTGCTTGAACACAACATTCAAATTGAAAGTTGTGCTTCTACTAAAGTAAATGATCAAAGGATGTTGCACACCGTTCAGACAAAGGTTGATGATTCAATCAAGATTGATCTGCATGAACTGGAACAAAAACTATATGAAGTTTGCAATTCTGAGTGA

Protein sequence

MFPFNDPSHHDYQTPLQNLFASQLISPPAASSSDLNTNKIEIITQNEERKIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATIKRLNLESSSCNNQRCNLASPCCVVIKPYSGGLEIAISNCITEENFQLSGVMRVLLEHNIQIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVCNSE

Homology

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BLAST of ClCG05G007640.1 vs. NCBI nr
Match: XP_038877683.1 (transcription factor bHLH118-like [Benincasa hispida])

HSP 1 Score: 347.8 bits (891), Expect = 6.7e-92
Identity = 183/222 (82.43%), Postives = 200/222 (90.09%), Query Frame = 0


Query: 1   MFPFNDPSHHDYQTPLQNLFASQLISPPAASSSD--LNTNKIEIITQNEERKIMHRDVER 60
           MFPFNDPSHHDYQ+ LQNLF+SQLIS P  SSSD  LNT++I+I TQNEERKIMHRD+ER
Sbjct: 1   MFPFNDPSHHDYQSHLQNLFSSQLISLPEGSSSDNYLNTDRIQITTQNEERKIMHRDLER 60

Query: 61  ERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATIKRL 120
           ERRKQMASLL NLRSLLPLEFIKG+RTRADIVDEAVNYIEHLRGKISEL VKR A +KRL
Sbjct: 61  ERRKQMASLLTNLRSLLPLEFIKGKRTRADIVDEAVNYIEHLRGKISELQVKRYAILKRL 120

Query: 121 NLESSSCNNQRC-NLASPCCVVIKPYSGGLEIAISNCITEENFQLSGVMRVLLEHNIQIE 180
           N ESSSC+NQ C NL+SP CVVIKPYSGGLEI ISNCI EENFQLSGVMRVL E +IQIE
Sbjct: 121 NFESSSCDNQCCNNLSSPSCVVIKPYSGGLEIVISNCIMEENFQLSGVMRVLFEQSIQIE 180

Query: 181 SCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVCNSE 220
           SCA+TKV  +RMLHT+QTKVDDS +IDLHEL+QKLY+VCNSE
Sbjct: 181 SCAATKVK-ERMLHTIQTKVDDSSRIDLHELQQKLYQVCNSE 221

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BLAST of ClCG05G007640.1 vs. NCBI nr
Match: XP_008439139.1 (PREDICTED: transcription factor bHLH36-like [Cucumis melo] >XP_008439141.1 PREDICTED: transcription factor bHLH36-like [Cucumis melo] >XP_008439142.1 PREDICTED: transcription factor bHLH36-like [Cucumis melo] >XP_016898946.1 PREDICTED: transcription factor bHLH36-like [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 1.5e-75
Identity = 165/225 (73.33%), Postives = 192/225 (85.33%), Query Frame = 0


Query: 1   MFPFNDPSH--HDYQTPLQNLFASQLI-SPPAASSSDLNT-NKIEIITQNEERKIMHRDV 60
           MFPFND SH   +YQ  LQNLF+ QLI S    SS +LNT NKI+  TQNEE+KIMHRDV
Sbjct: 1   MFPFNDSSHDIDNYQIHLQNLFSYQLISSQEGGSSENLNTNNKIDETTQNEEKKIMHRDV 60

Query: 61  ERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATIK 120
           ERERRKQMASLL NLRSLLPLEFIKGRR+R DIVDEAVNYIE+LRGKI+ELH+KRDA +K
Sbjct: 61  ERERRKQMASLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGKINELHLKRDAIVK 120

Query: 121 RLNLE-SSSCNNQRCNLASPCCVVIKPYSGGLEIAISN-CITEENFQLSGVMRVLLEHNI 180
           RL+LE SSSCNN   ++ S  CVVIK YSGGLEI ISN  I+E+NFQLSGVMRVL+E +I
Sbjct: 121 RLHLESSSSCNN---DIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSI 180

Query: 181 QIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVCNSE 220
           +IE+C+STK+N +RML+T+QTKVDDS KIDLHEL+Q+LY+VCNSE
Sbjct: 181 EIETCSSTKLN-ERMLYTIQTKVDDSTKIDLHELKQRLYQVCNSE 221

[Close]

BLAST of ClCG05G007640.1 vs. NCBI nr
Match: XP_004148147.1 (transcription factor bHLH36 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-74
Identity = 163/226 (72.12%), Postives = 189/226 (83.63%), Query Frame = 0


Query: 1   MFPFNDPSH--HDYQTPLQNLFASQLISPPAASS--SDLNTN-KIEIITQNEERKIMHRD 60
           MFPFND SH   DYQ  LQNLF+ QLIS     S   +LNTN KI+  TQNEE+KIMHRD
Sbjct: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60

Query: 61  VERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATI 120
           +ERERRKQM SLL NLRSLLPLEFIKGRR+R DIVDEAVNYIE+LRG+++ELHVKRDA +
Sbjct: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120

Query: 121 KRLNLE-SSSCNNQRCNLASPCCVVIKPYSGGLEIAISN-CITEENFQLSGVMRVLLEHN 180
           KRL+LE SSSCNN   ++ S  CVVIK YSGGLEI ISN  I+E+NFQLSGVMRVL+E +
Sbjct: 121 KRLHLESSSSCNN---DIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQS 180

Query: 181 IQIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVCNSE 220
           I+IE+C+STK+N +RMLHT+QTKVDD  KIDLHEL+QKLY+VCNSE
Sbjct: 181 IEIETCSSTKLN-ERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE 222

[Close]

BLAST of ClCG05G007640.1 vs. NCBI nr
Match: XP_022923000.1 (transcription factor bHLH118-like [Cucurbita moschata])

HSP 1 Score: 237.7 bits (605), Expect = 9.8e-59
Identity = 139/216 (64.35%), Postives = 157/216 (72.69%), Query Frame = 0


Query: 1   MFPFNDPSHHDYQTPLQNLFASQLISPPAASSSDLNTNKIEIITQNEERKIMHRDVERER 60
           MFPFN PSHH     L               SS+LN NKIE  T NE RKI+HRD+ERER
Sbjct: 1   MFPFNHPSHHHQPHQLSG----------CEGSSELNPNKIE-STHNEVRKIVHRDLERER 60

Query: 61  RKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATIKRLNL 120
           RKQM SLL NLRSLLPL+ ++GRRTRADIVDEAVNYIEH RGKISELHVKRDA IK L+L
Sbjct: 61  RKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHFRGKISELHVKRDA-IKGLHL 120

Query: 121 ESSSCNNQRCNLASPCCVVIKPYSGGLEIAISNCITEENFQLSGVMRVLLEHNIQIESCA 180
           + SS      +L    CVVIKPYSGGLEI IS    E+N +LS VMRVLLE +I+I SCA
Sbjct: 121 DESS------DLCPSSCVVIKPYSGGLEIVIS-IFREQNLELSEVMRVLLEESIEITSCA 180

Query: 181 STKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVC 217
           STKV +  MLHT+ TKVDD  +ID+HEL+QKLY VC
Sbjct: 181 STKVKEM-MLHTIHTKVDDPTRIDVHELQQKLYRVC 196

[Close]

BLAST of ClCG05G007640.1 vs. NCBI nr
Match: KAG6576761.1 (Transcription factor basic helix-loop-helix 118, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234.6 bits (597), Expect = 8.3e-58
Identity = 137/216 (63.43%), Postives = 157/216 (72.69%), Query Frame = 0


Query: 1   MFPFNDPSHHDYQTPLQNLFASQLISPPAASSSDLNTNKIEIITQNEERKIMHRDVERER 60
           MFPFN PSHH     L               SS+LN NKIE  T NE RKI+HRD+ERER
Sbjct: 1   MFPFNHPSHHHQPHQLSG----------CEGSSELNANKIE-STHNEVRKIVHRDLERER 60

Query: 61  RKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATIKRLNL 120
           RKQM SLL NLRSLLPL+ ++GRRTRADIVDEAVNYIEHLRGK+SELHVKRDA IK L+L
Sbjct: 61  RKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHLRGKMSELHVKRDA-IKGLHL 120

Query: 121 ESSSCNNQRCNLASPCCVVIKPYSGGLEIAISNCITEENFQLSGVMRVLLEHNIQIESCA 180
              S      +L    C+VIKPYS GLEI IS    E+N +LS VMRVLLE +I+I SCA
Sbjct: 121 ADES-----SDLCPSSCIVIKPYSCGLEIVIS-IFREQNLELSEVMRVLLEESIEITSCA 180

Query: 181 STKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVC 217
           STKV  +RMLHT+ TKVDD  +ID+HEL+QKLY+VC
Sbjct: 181 STKVK-ERMLHTIHTKVDDPTRIDVHELQQKLYQVC 197

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BLAST of ClCG05G007640.1 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22
Identity = 67/163 (41.10%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 50  KIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHV 109
           K++H+++E+ RR++MASL  +LRSLLPLEFI+G+R+ +D V  AVNYI++L+  I +++ 
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINS 62

Query: 110 KRDATIKRLNLESSSCNNQRCNLASPCCVVIKPYSGGLEIAISNCITEENFQLSGVMRVL 169
           KRD  +        S N Q  N  S   VVI+P   G+EI +S   T      S V++VL
Sbjct: 63  KRDDLVLLSGRSFRSSNEQEWNEISN-HVVIRPCLVGIEIVLSILQT----PFSSVLQVL 122

Query: 170 LEHNIQIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKL 213
            EH + +     + VND R++HT+Q +V+D   IDL +L+  L
Sbjct: 123 REHGLYVLGYICSSVND-RLIHTLQAEVNDLALIDLADLKDTL 159

[Close]

BLAST of ClCG05G007640.1 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-22
Identity = 70/169 (41.42%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 50  KIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHV 109
           K+MHR+ ER+RR++MASL  +LRSLLPL FIKG+R+ +D V+EAVNYI++L+ KI EL V
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSV 62

Query: 110 KRD--ATIKRLNLESSSCNNQRCN---LASPCCVVIKPYSGGLEIAISNCITEENFQLSG 169
           +RD    + R +L  SS  + + +   ++    VV++    G+EI +S+       + S 
Sbjct: 63  RRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFSS 122

Query: 170 VMRVLLEHNIQIESCASTKVNDQRMLHTVQTKVDD-SIKIDLHELEQKL 213
           V++VL E+ + + +  S+ V+D R+++T+Q +V+D ++ IDL ELE++L
Sbjct: 123 VLQVLSEYGLCLLNSISSIVDD-RLVYTIQAEVNDMALMIDLAELEKRL 170

[Close]

BLAST of ClCG05G007640.1 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 63/174 (36.21%), Postives = 104/174 (59.77%), Query Frame = 0


Query: 47  EERKIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISE 106
           +++K++HRD+ER+RR++MA+L   LR+ LPL++IKG+R  +D V+ AVN+I+    +I E
Sbjct: 41  KKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKE 100

Query: 107 LHVKRDATIKRLNLESSS-----CNNQRCNLASPCCVVIKPYSGGLEIAI-SNCITEENF 166
           L  +RD   +       S             + P  V+++P+  GLE+ + SN    E  
Sbjct: 101 LSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEAL 160

Query: 167 QLSGVMRVLLEHNIQIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYE 215
            LS V+  + E  +++ S  +T+VND R++HT+Q +V+    IDL  L+QKL E
Sbjct: 161 PLSKVLETIQEKGLEVMSSFTTRVND-RLMHTIQVEVNSFGCIDLLWLQQKLVE 213

[Close]

BLAST of ClCG05G007640.1 vs. ExPASy Swiss-Prot
Match: Q9LQ08 (Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 65/186 (34.95%), Postives = 109/186 (58.60%), Query Frame = 0


Query: 47  EERKIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISE 106
           E +K+ HRD+ER+RR++++SL   LR+LLP ++I+G+R+ +D + +AVNYI+ L+ KI E
Sbjct: 72  ESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDLQIKIKE 131

Query: 107 LHVKRDATIKRLN-----------LESSSCNNQRCNLASPC--------CVVIKPYSGGL 166
           L+ KR+   K ++             SS  ++    L+S C         VV+ P   G+
Sbjct: 132 LNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVVTPCLVGV 191

Query: 167 EIAISNCITEENFQLSGVMRVLL-EHNIQIESCASTKVNDQRMLHTVQTKVDDSIKIDLH 213
           EI IS C+      LS V+++L  E    + SC S +   QR +HT+ ++V+D  +I++ 
Sbjct: 192 EIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSAR-RQQRFMHTIVSQVEDGKQINIL 251

[Close]

BLAST of ClCG05G007640.1 vs. ExPASy Swiss-Prot
Match: Q9LN95 (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20
Identity = 67/182 (36.81%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 47  EERKIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISE 106
           + ++  H+++ER+RR++  SL   LR LLP ++IKG+R+ AD V EAVNYI+ L+ KI E
Sbjct: 73  KNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKKIKE 132

Query: 107 LHVKRDATIKRLNLESSSCNNQRCNLASPCC---------VVIKPYSGGLEIAISNCITE 166
           +  KRD   + +   SS       +LAS  C         VV++P   GLEI +S C   
Sbjct: 133 VSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCCNRH 192

Query: 167 ENFQLSGVMRVLL-EHNIQIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVC 219
           E+  LS V+++L  E    I SC ST+++ Q  +HT+ ++V++ I++   EL++K+ ++ 
Sbjct: 193 ESC-LSSVLQLLAQEQCFNIVSCISTRLH-QGFIHTIASEVEEGIEVYFSELQEKIIKIG 252

[Close]

BLAST of ClCG05G007640.1 vs. ExPASy TrEMBL
Match: A0A1S3AY11 (transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103484025 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 7.3e-76
Identity = 165/225 (73.33%), Postives = 192/225 (85.33%), Query Frame = 0


Query: 1   MFPFNDPSH--HDYQTPLQNLFASQLI-SPPAASSSDLNT-NKIEIITQNEERKIMHRDV 60
           MFPFND SH   +YQ  LQNLF+ QLI S    SS +LNT NKI+  TQNEE+KIMHRDV
Sbjct: 1   MFPFNDSSHDIDNYQIHLQNLFSYQLISSQEGGSSENLNTNNKIDETTQNEEKKIMHRDV 60

Query: 61  ERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATIK 120
           ERERRKQMASLL NLRSLLPLEFIKGRR+R DIVDEAVNYIE+LRGKI+ELH+KRDA +K
Sbjct: 61  ERERRKQMASLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGKINELHLKRDAIVK 120

Query: 121 RLNLE-SSSCNNQRCNLASPCCVVIKPYSGGLEIAISN-CITEENFQLSGVMRVLLEHNI 180
           RL+LE SSSCNN   ++ S  CVVIK YSGGLEI ISN  I+E+NFQLSGVMRVL+E +I
Sbjct: 121 RLHLESSSSCNN---DIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQSI 180

Query: 181 QIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVCNSE 220
           +IE+C+STK+N +RML+T+QTKVDDS KIDLHEL+Q+LY+VCNSE
Sbjct: 181 EIETCSSTKLN-ERMLYTIQTKVDDSTKIDLHELKQRLYQVCNSE 221

[Close]

BLAST of ClCG05G007640.1 vs. ExPASy TrEMBL
Match: A0A0A0L9L0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G178580 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.2e-75
Identity = 163/226 (72.12%), Postives = 189/226 (83.63%), Query Frame = 0


Query: 1   MFPFNDPSH--HDYQTPLQNLFASQLISPPAASS--SDLNTN-KIEIITQNEERKIMHRD 60
           MFPFND SH   DYQ  LQNLF+ QLIS     S   +LNTN KI+  TQNEE+KIMHRD
Sbjct: 1   MFPFNDSSHDIDDYQIHLQNLFSYQLISSQEGCSRTENLNTNSKIDETTQNEEKKIMHRD 60

Query: 61  VERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATI 120
           +ERERRKQM SLL NLRSLLPLEFIKGRR+R DIVDEAVNYIE+LRG+++ELHVKRDA +
Sbjct: 61  LERERRKQMTSLLTNLRSLLPLEFIKGRRSRVDIVDEAVNYIEYLRGRMNELHVKRDAIV 120

Query: 121 KRLNLE-SSSCNNQRCNLASPCCVVIKPYSGGLEIAISN-CITEENFQLSGVMRVLLEHN 180
           KRL+LE SSSCNN   ++ S  CVVIK YSGGLEI ISN  I+E+NFQLSGVMRVL+E +
Sbjct: 121 KRLHLESSSSCNN---DIPSTSCVVIKQYSGGLEIVISNGIISEQNFQLSGVMRVLIEQS 180

Query: 181 IQIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVCNSE 220
           I+IE+C+STK+N +RMLHT+QTKVDD  KIDLHEL+QKLY+VCNSE
Sbjct: 181 IEIETCSSTKLN-ERMLHTIQTKVDDPTKIDLHELKQKLYQVCNSE 222

[Close]

BLAST of ClCG05G007640.1 vs. ExPASy TrEMBL
Match: A0A6J1EAE1 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430817 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.7e-59
Identity = 139/216 (64.35%), Postives = 157/216 (72.69%), Query Frame = 0


Query: 1   MFPFNDPSHHDYQTPLQNLFASQLISPPAASSSDLNTNKIEIITQNEERKIMHRDVERER 60
           MFPFN PSHH     L               SS+LN NKIE  T NE RKI+HRD+ERER
Sbjct: 1   MFPFNHPSHHHQPHQLSG----------CEGSSELNPNKIE-STHNEVRKIVHRDLERER 60

Query: 61  RKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATIKRLNL 120
           RKQM SLL NLRSLLPL+ ++GRRTRADIVDEAVNYIEH RGKISELHVKRDA IK L+L
Sbjct: 61  RKQMLSLLTNLRSLLPLQLVEGRRTRADIVDEAVNYIEHFRGKISELHVKRDA-IKGLHL 120

Query: 121 ESSSCNNQRCNLASPCCVVIKPYSGGLEIAISNCITEENFQLSGVMRVLLEHNIQIESCA 180
           + SS      +L    CVVIKPYSGGLEI IS    E+N +LS VMRVLLE +I+I SCA
Sbjct: 121 DESS------DLCPSSCVVIKPYSGGLEIVIS-IFREQNLELSEVMRVLLEESIEITSCA 180

Query: 181 STKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVC 217
           STKV +  MLHT+ TKVDD  +ID+HEL+QKLY VC
Sbjct: 181 STKVKEM-MLHTIHTKVDDPTRIDVHELQQKLYRVC 196

[Close]

BLAST of ClCG05G007640.1 vs. ExPASy TrEMBL
Match: A0A6J1JAJ0 (transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111482745 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 8.9e-58
Identity = 137/218 (62.84%), Postives = 159/218 (72.94%), Query Frame = 0


Query: 1   MFPFNDPSHHDYQTPLQNLFASQLISPPAASSSDLNTNKIEIITQNEERKIMHRDVERER 60
           MFPFNDPSHH     L               SS+LN NKIE  T NE R+I+HRD+ERER
Sbjct: 1   MFPFNDPSHHHQPHQLSG----------CEGSSELNANKIE-STHNEVRQIVHRDLERER 60

Query: 61  RKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATIKRLNL 120
           RKQM SL  +LRSLLPL  ++GRRTRADIVDEAVNYIEHLRGKISEL VKRDA IK L+L
Sbjct: 61  RKQMGSLFTDLRSLLPLPLVEGRRTRADIVDEAVNYIEHLRGKISELQVKRDA-IKGLHL 120

Query: 121 ESSSCNNQRCNLASPCCVVIKPYSGGLEIAISNCITEENFQLSGVMRVLLEHNIQIESCA 180
           + SS      +L    CVVIKPYSGGLEI IS    E+N +LS VMRVL+E +I+I SCA
Sbjct: 121 DESS------DLCPSSCVVIKPYSGGLEIMIS-IFREQNLELSEVMRVLVEESIEIMSCA 180

Query: 181 STKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVCNS 219
           STKV  +RMLHT+ TKVDD  +ID+HEL+QKL++VC S
Sbjct: 181 STKVK-ERMLHTIHTKVDDPKRIDVHELQQKLHQVCTS 198

[Close]

BLAST of ClCG05G007640.1 vs. ExPASy TrEMBL
Match: A0A6J1CHG5 (transcription factor bHLH36-like OS=Momordica charantia OX=3673 GN=LOC111011678 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.7e-54
Identity = 124/199 (62.31%), Postives = 152/199 (76.38%), Query Frame = 0


Query: 26  SPPAASSSDLNTNKIEII-------TQNEERKIMHRDVERERRKQMASLLINLRSLLPLE 85
           S P  SS D  T++  +        T +++RKIMHRD+ERERRKQMASLL NLRSLLPLE
Sbjct: 11  SAPEGSSCDFTTHQNLVSNSENVGRTDDQDRKIMHRDLERERRKQMASLLTNLRSLLPLE 70

Query: 86  FIKGRRTRADIVDEAVNYIEHLRGKISELHVKRDATIKRLNLESSSCNNQRCNLASPCCV 145
           FIKGRR+RAD+V+EAV YIEHL+GKISELH+KRDA +KR+ L+S    N   N +S  CV
Sbjct: 71  FIKGRRSRADLVNEAVRYIEHLKGKISELHIKRDA-LKRVYLDSLGYQN---NESSSSCV 130

Query: 146 VIKPYSGGLEIAISNCITEENFQLSGVMRVLLEHNIQIESCASTKVNDQRMLHTVQTKVD 205
           VI PYSGGLEI IS C  EE  +LSGVMRVLL+ +  ++SCASTKVN  RM HT+Q+KVD
Sbjct: 131 VINPYSGGLEIVISCCFREEKLKLSGVMRVLLQQSTHVQSCASTKVNG-RMFHTIQSKVD 190

Query: 206 DSIKIDLHELEQKLYEVCN 218
            S +ID+ EL++KLY+VCN
Sbjct: 191 VSRRIDILELQRKLYQVCN 204

[Close]

BLAST of ClCG05G007640.1 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 67/163 (41.10%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 50  KIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHV 109
           K++H+++E+ RR++MASL  +LRSLLPLEFI+G+R+ +D V  AVNYI++L+  I +++ 
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINS 62

Query: 110 KRDATIKRLNLESSSCNNQRCNLASPCCVVIKPYSGGLEIAISNCITEENFQLSGVMRVL 169
           KRD  +        S N Q  N  S   VVI+P   G+EI +S   T      S V++VL
Sbjct: 63  KRDDLVLLSGRSFRSSNEQEWNEISN-HVVIRPCLVGIEIVLSILQT----PFSSVLQVL 122

Query: 170 LEHNIQIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKL 213
            EH + +     + VND R++HT+Q +V+D   IDL +L+  L
Sbjct: 123 REHGLYVLGYICSSVND-RLIHTLQAEVNDLALIDLADLKDTL 159

[Close]

BLAST of ClCG05G007640.1 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.4e-23
Identity = 70/169 (41.42%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 50  KIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISELHV 109
           K+MHR+ ER+RR++MASL  +LRSLLPL FIKG+R+ +D V+EAVNYI++L+ KI EL V
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSV 62

Query: 110 KRD--ATIKRLNLESSSCNNQRCN---LASPCCVVIKPYSGGLEIAISNCITEENFQLSG 169
           +RD    + R +L  SS  + + +   ++    VV++    G+EI +S+       + S 
Sbjct: 63  RRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFSS 122

Query: 170 VMRVLLEHNIQIESCASTKVNDQRMLHTVQTKVDD-SIKIDLHELEQKL 213
           V++VL E+ + + +  S+ V+D R+++T+Q +V+D ++ IDL ELE++L
Sbjct: 123 VLQVLSEYGLCLLNSISSIVDD-RLVYTIQAEVNDMALMIDLAELEKRL 170

[Close]

BLAST of ClCG05G007640.1 vs. TAIR 10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 9.2e-23
Identity = 63/174 (36.21%), Postives = 104/174 (59.77%), Query Frame = 0


Query: 47  EERKIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISE 106
           +++K++HRD+ER+RR++MA+L   LR+ LPL++IKG+R  +D V+ AVN+I+    +I E
Sbjct: 41  KKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKE 100

Query: 107 LHVKRDATIKRLNLESSS-----CNNQRCNLASPCCVVIKPYSGGLEIAI-SNCITEENF 166
           L  +RD   +       S             + P  V+++P+  GLE+ + SN    E  
Sbjct: 101 LSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEAL 160

Query: 167 QLSGVMRVLLEHNIQIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYE 215
            LS V+  + E  +++ S  +T+VND R++HT+Q +V+    IDL  L+QKL E
Sbjct: 161 PLSKVLETIQEKGLEVMSSFTTRVND-RLMHTIQVEVNSFGCIDLLWLQQKLVE 213

[Close]

BLAST of ClCG05G007640.1 vs. TAIR 10
Match: AT1G62975.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 65/186 (34.95%), Postives = 109/186 (58.60%), Query Frame = 0


Query: 47  EERKIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISE 106
           E +K+ HRD+ER+RR++++SL   LR+LLP ++I+G+R+ +D + +AVNYI+ L+ KI E
Sbjct: 72  ESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDLQIKIKE 131

Query: 107 LHVKRDATIKRLN-----------LESSSCNNQRCNLASPC--------CVVIKPYSGGL 166
           L+ KR+   K ++             SS  ++    L+S C         VV+ P   G+
Sbjct: 132 LNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVVTPCLVGV 191

Query: 167 EIAISNCITEENFQLSGVMRVLL-EHNIQIESCASTKVNDQRMLHTVQTKVDDSIKIDLH 213
           EI IS C+      LS V+++L  E    + SC S +   QR +HT+ ++V+D  +I++ 
Sbjct: 192 EIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSAR-RQQRFMHTIVSQVEDGKQINIL 251

[Close]

BLAST of ClCG05G007640.1 vs. TAIR 10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.9e-21
Identity = 67/182 (36.81%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 47  EERKIMHRDVERERRKQMASLLINLRSLLPLEFIKGRRTRADIVDEAVNYIEHLRGKISE 106
           + ++  H+++ER+RR++  SL   LR LLP ++IKG+R+ AD V EAVNYI+ L+ KI E
Sbjct: 73  KNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKKIKE 132

Query: 107 LHVKRDATIKRLNLESSSCNNQRCNLASPCC---------VVIKPYSGGLEIAISNCITE 166
           +  KRD   + +   SS       +LAS  C         VV++P   GLEI +S C   
Sbjct: 133 VSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCCNRH 192

Query: 167 ENFQLSGVMRVLL-EHNIQIESCASTKVNDQRMLHTVQTKVDDSIKIDLHELEQKLYEVC 219
           E+  LS V+++L  E    I SC ST+++ Q  +HT+ ++V++ I++   EL++K+ ++ 
Sbjct: 193 ESC-LSSVLQLLAQEQCFNIVSCISTRLH-QGFIHTIASEVEEGIEVYFSELQEKIIKIG 252

The following BLAST results are available for this feature:

BLAST of ClCG05G007640.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877683.1	6.7e-92	82.43	transcription factor bHLH118-like [Benincasa hispida]	[more]
XP_008439139.1	1.5e-75	73.33	PREDICTED: transcription factor bHLH36-like [Cucumis melo] >XP_008439141.1 PREDI...	[more]
XP_004148147.1	1.3e-74	72.12	transcription factor bHLH36 [Cucumis sativus]	[more]
XP_022923000.1	9.8e-59	64.35	transcription factor bHLH118-like [Cucurbita moschata]	[more]
KAG6576761.1	8.3e-58	63.43	Transcription factor basic helix-loop-helix 118, partial [Cucurbita argyrosperma...	[more]

BLAST of ClCG05G007640.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STJ7	2.0e-22	41.10	Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=...	[more]
Q9FLI1	3.4e-22	41.42	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]
Q9STJ6	1.3e-21	36.21	Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=...	[more]
Q9LQ08	1.4e-20	34.95	Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=...	[more]
Q9LN95	5.5e-20	36.81	Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1	[more]

BLAST of ClCG05G007640.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AY11	7.3e-76	73.33	transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103484025 PE=4 SV...	[more]
A0A0A0L9L0	6.2e-75	72.12	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G178580 PE=4 S...	[more]
A0A6J1EAE1	4.7e-59	64.35	transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430817 ...	[more]
A0A6J1JAJ0	8.9e-58	62.84	transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111482745 PE...	[more]
A0A6J1CHG5	2.7e-54	62.31	transcription factor bHLH36-like OS=Momordica charantia OX=3673 GN=LOC111011678 ...	[more]

BLAST of ClCG05G007640.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25400.1	1.4e-23	41.10	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	2.4e-23	41.42	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25410.1	9.2e-23	36.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G62975.1	1.0e-21	34.95	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	3.9e-21	36.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 54..106 e-value: 3.1E-7 score: 40.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 49..101 e-value: 4.1E-10 score: 39.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 48..100 score: 13.903315
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 39..131 e-value: 5.1E-10 score: 41.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 46..116
None	No IPR available	PANTHER	PTHR13935:SF106	TRANSCRIPTION FACTOR BHLH120-RELATED	coord: 39..217
None	No IPR available	CDD	cd18914	bHLH_AtORG2_like	coord: 49..125 e-value: 2.10137E-23 score: 87.3587
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 39..217

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG05G007640	ClCG05G007640	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G007640.1-exon	ClCG05G007640.1-exon-CG_Chr05:8133011..8133253	exon
ClCG05G007640.1-exon	ClCG05G007640.1-exon-CG_Chr05:8133384..8133728	exon
ClCG05G007640.1-exon	ClCG05G007640.1-exon-CG_Chr05:8133828..8133899	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G007640.1-cds	ClCG05G007640.1-cds-CG_Chr05:8133011..8133253	CDS
ClCG05G007640.1-cds	ClCG05G007640.1-cds-CG_Chr05:8133384..8133728	CDS
ClCG05G007640.1-cds	ClCG05G007640.1-cds-CG_Chr05:8133828..8133899	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG05G007640.1	ClCG05G007640.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding