
ClCG02G017190.2 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGGAAGAAGAAGAAACAGAGTTCGGAGGAACTCTCTCAATCCATTTTCATGGCGGTAGCTACTTTCTTTCCTTCTCAAACTTCATACAACAATCGCCATTTGCTTTCTCGTGACATTAGATTTCGGTCTCCTCTTCGTTTGTCCACTCGTCGTTCTTTCTTCTCTACTATTCGGGCGAGCTCGACGCTCGTTCTTGAGTCGGTATGACCTTATGTTTCTTGTTCCGATGATCGTTTATATTCCCCCTTTTTGATGTTATAACGAATCCCTGTTGTGGGTTGAAGTTGAATTGTACTGTGATTTTCCATCCTGTGTTTTGTTGTCAGGGAAATTTTCGTCTAATTTGTAACTGTAACTCAATTTCGAACTGTTTCATTAGGTTGAATTTGAAATTACTTTCATTTTATGTTGCTATCAGGATTTAGGCATTCAACAGGATCAGAATTCGAAAATTGACGTGTTTTCATGTCCGGTTTGTTATGAGCCATTGTTGAGAAAAGGTCCGCCAGGTTTTAACTTGTAAGTTGACTAATTGGGATGTCTACCATCTTCTGATATTTATCTTGTTACATTACATTATAATTTGATCTGGGTGAAGTGGAAAATTTGCAGGCCAGCTATTTATAGATCTGGTTTCAAGTGTAGAAGATGCAATAAGTCATATACCAGCAAAAACATCTTTTTAGATCTCACAGTTACTTCTGGAATGAAGGAATATGTTGAAGTCAAACCTGGGGGAACTGAGCTCTTTCGGTATCTGTTTGATATATCCTCTTCATTTTTTCTTCTCTGTAGTCCATTCACTTCTGAGTTTTACTACTTTGTTTCATCTTTTCGTGTTAGATGATATAATATTAAATTTACCTTTACTCATTAGCTTAAACTTTTGGGTCAATCGGTTATTTAACATGGCATCAAAACAGTGGATTAAATTTACCTTCACCCACCGGTTTAAGCTTTTGGGTGAATTGTTAAGTTGATGTCACCCATTAATTTAGTTAAAGGAAGGAGTACGTTATTTTCTCCAATTTTCCTCTCAAGGAGACTATTCTGAACTTCTTATGATTTTGAAACTTTGTAGGAGTCCACTCGTTTCCTTTCTATATGAAAGAGGATGGCGTCAAAACTTCAACCGAAGTGGTTTTCCAGGCCTTGATGAAGAAGTATGCTCCCTCTCAATAATAACACTACCATTCAAATGCACGAAGATTTTAGATTGATATTTTGATGCCATTCAAAAGATTATTTGTGGAGAAAAACAAATCTAATTGCGATGCTACATAAGTTCGCTTGTTATTGGAAATATAACCTTTTCATTGCTTTTGGATAATGTGAATATGGATTGATACCTTTTCTGTAACTATATACTACTGCAGTTTAAAATGGCCATGGAGTATTTTAAACCTGTTGAAGGTGGCCTTTTAGTGGATGCAAGCTGTGGTAGTGGCTTGTTTTCCCGAAAATTTGCAAAATCTGGGTCTTTCTCAGGTGTAATTGCACTTGATTTCTCTGAGAATATGCTCCTTCAATGTTATGATTTCATTAAGAAAGATGCTACTCTTTTGAACAGGTAATCTTAGTGACTTAGAACTGCAATCACTATTATATTCTGCTGGCTTGTGTATTCAGTAGTCCTCTTCACTTGCAAGAAAGGAAGGTTGTCCTAATTAGCTCATCTTTTGTGGAAAATATGCAGTAATCTTGCTCTTGTGAGGGCAGATATCTCTAGGCTTCCCTTTTCATCAGGATCAGTGGATGCTGTTCATGCTGGTGCAGCGTTGCATTGTTGGCCATCTCCTTCCAATGCTGTAAGGATTTTGTCTTGTAGATCATATTCTATTATTCGATTTCCTACCAGTGGTCATAATCCGCTGAATTCAATCAGGTTACAAAATATCACCGTTGAGTCGATGAATTCATCCCATTATTTTCGCAATTGAAGTTCTCTTCTCAAACCAGCATACGTGATTGAAATCATTTTAAGTTTTTCTCTCCATGCTTTGCCCCAATTCGTCTTGGTACTTGGTCCATTAAAAGGAAGTGATCAAAGCTTACTCTTCACAATAGTTATAATGGACTCAAATCATATGGAACAATATACATTGTCGTGTCTGAAACAATGGCAGATTCTAATGGCCAATCGGTATTTTCATACATCTTCTTGACTAACACATTCCTTTTAGGAAGTTTTAGTTGAAATCATTAGGAATTAGCTCCTGGGTATTTTTTATATATTTATAGCAACGAGGCATCCATTTATGATATTTTCAGCTCAGATTCTCCCTGTTCTGATCCCCATAAGGTTAATCTTTTTCCGCTTCTTCTTCTAGTTTTTGTAATGGTTTTCTTTGACTCTTATCAGATTGCTGAGATCACTCGTATAATGCGCAGTGGTGGAGTATTTGTGGGAACCACTTTTTTGCGGTACACTTCATCTACTCCCTGGTATATAAGATTTTCTAGAGAGGTATACTCTTAATCTATTCTGTCCCATTCTTACACTTATGGATATCCGATTAGTAGAAAATTTAGCTTCACTAATTATCAAGAAGCAGCTATGATGAACATTTGTGTTATCTGATTGATATTTCTTGGGTCATGAACTTGGTTATCATGCATTTGCATATATGAAGTCCATCCTTGCATAATTTCTAATAACTTGCGATTAAGGTGTTATAAACAAGCTAGCTTCCTAAATGGTAGATTGAACTTCTTGCTGGCTTATATTTTTCAGTTTCATTGGACTGAGTATAGATATTTACTAGAGTTTCTAACTAGAACCCGTCTAGTAAAGATAATTAGGAATCAAATTTAAACTAAGACCATGTTTACTGCTCTGTAATCTATCAAGATTGTTGCAATCATAATGAATATTTTTTATTCATAATTCACATAATATTGTTAACTAGTTTTCTAGAAATATTATTTAAATGAGTCTCACTTTTCGTATTACGATTGATTAATTATGTTTACTAAGAAGTAAACGTGGCCTAAATGCATTAAAATGGTTCAAATCCGAAAAACAATTTCCCACGACCTACGTGATCGAACCAACATTCTCCTGTTTCTTTCTAGTCAAACAAACTACAGAATGGCAAAGAAGGTGAAGGTACTTGTTGGAAAACACAACCTTTTTCTTTAGAAAGGAGGATCCTAGGCGACCTCCTCCTCCATCATCTCGTAGATACTGACCTCTATGCTACAAATAATCCTGAATTCTGTCATAACTCATCAATTGTTCAACTAGCTACTGATCCCCAAACGAGCATGTAAAATTGCTGCTTACCATCTTATGATAAACAATGATTTTCACATTTCTTGATTATCAAGATTGAATTGTGAGCGTTACAAGTCTGTGTACTGCAGCGTGCTTTTCAGAACTTTGGCTACTTAATTGAGGAAGAAATAGAGGATTTGTGCAAATCCTGCGGTCTGATTAACTATTCAAGCAAAGTTCAGCAATCTTTCATTATGTTCTCTGCGCAGAAGCCTTGAAAGTGAGTTCCAAATCTCATCTACATTATGTTGTGTATGTTCAGAATCAAACTATAAATGAATTATATTGACAATTTTATACAATACCATGTAAATTGTTGGAACTGAAGAATAATTGGTTGAATTGAATAGAATTAAATTGAGATGAGATGTGTAATAATGCTCTCTTTACGTGTTGATTTTTTAGGCATATTCTCGTAAGCTTGTTCTGAT GGGGAAGAAGAAGAAACAGAGTTCGGAGGAACTCTCTCAATCCATTTTCATGGCGGTAGCTACTTTCTTTCCTTCTCAAACTTCATACAACAATCGCCATTTGCTTTCTCGTGACATTAGATTTCGGTCTCCTCTTCGTTTGTCCACTCGTCGTTCTTTCTTCTCTACTATTCGGGCGAGCTCGACGCTCGTTCTTGAGTCGGATTTAGGCATTCAACAGGATCAGAATTCGAAAATTGACGTGTTTTCATGTCCGGTTTGTTATGAGCCATTGTTGAGAAAAGGTCCGCCAGGTTTTAACTTGCCAGCTATTTATAGATCTGGTTTCAAGTGTAGAAGATGCAATAAGTCATATACCAGCAAAAACATCTTTTTAGATCTCACAGTTACTTCTGGAATGAAGGAATATGTTGAAGTCAAACCTGGGGGAACTGAGCTCTTTCGGAGTCCACTCGTTTCCTTTCTATATGAAAGAGGATGGCGTCAAAACTTCAACCGAAGTGGTTTTCCAGGCCTTGATGAAGAATTTAAAATGGCCATGGAGTATTTTAAACCTGTTGAAGGTGGCCTTTTAGTGGATGCAAGCTGTGGTAGTGGCTTGTTTTCCCGAAAATTTGCAAAATCTGGGTCTTTCTCAGGTGTAATTGCACTTGATTTCTCTGAGAATATGCTCCTTCAATGTTATGATTTCATTAAGAAAGATGCTACTCTTTTGAACAGTAATCTTGCTCTTGTGAGGGCAGATATCTCTAGGCTTCCCTTTTCATCAGGATCAGTGGATGCTGTTCATGCTGGTGCAGCGTTGCATTGTTGGCCATCTCCTTCCAATGCTGTAAGGATTTTGTCTTGTAGATCATATTCTATTATTCGATTTCCTACCAGTGGTCATAATCCGCTGAATTCAATCAGTTATAATGGACTCAAATCATATGGAACAATATACATTGTCGTGTCTGAAACAATGGCAGATTCTAATGGCCAATCGATTGCTGAGATCACTCGTATAATGCGCAGTGGTGGAGTATTTGTGGGAACCACTTTTTTGCGGTACACTTCATCTACTCCCTGGTATATAAGATTTTCTAGAGAGCGTGCTTTTCAGAACTTTGGCTACTTAATTGAGGAAGAAATAGAGGATTTGTGCAAATCCTGCGGTCTGATTAACTATTCAAGCAAAGTTCAGCAATCTTTCATTATGTTCTCTGCGCAGAAGCCTTGAAAGTGAGTTCCAAATCTCATCTACATTATGTTGTGTATGTTCAGAATCAAACTATAAATGAATTATATTGACAATTTTATACAATACCATGTAAATTGTTGGAACTGAAGAATAATTGGTTGAATTGAATAGAATTAAATTGAGATGAGATGTGTAATAATGCTCTCTTTACGTGTTGATTTTTTAGGCATATTCTCGTAAGCTTGTTCTGAT ATGGCGGTAGCTACTTTCTTTCCTTCTCAAACTTCATACAACAATCGCCATTTGCTTTCTCGTGACATTAGATTTCGGTCTCCTCTTCGTTTGTCCACTCGTCGTTCTTTCTTCTCTACTATTCGGGCGAGCTCGACGCTCGTTCTTGAGTCGGATTTAGGCATTCAACAGGATCAGAATTCGAAAATTGACGTGTTTTCATGTCCGGTTTGTTATGAGCCATTGTTGAGAAAAGGTCCGCCAGGTTTTAACTTGCCAGCTATTTATAGATCTGGTTTCAAGTGTAGAAGATGCAATAAGTCATATACCAGCAAAAACATCTTTTTAGATCTCACAGTTACTTCTGGAATGAAGGAATATGTTGAAGTCAAACCTGGGGGAACTGAGCTCTTTCGGAGTCCACTCGTTTCCTTTCTATATGAAAGAGGATGGCGTCAAAACTTCAACCGAAGTGGTTTTCCAGGCCTTGATGAAGAATTTAAAATGGCCATGGAGTATTTTAAACCTGTTGAAGGTGGCCTTTTAGTGGATGCAAGCTGTGGTAGTGGCTTGTTTTCCCGAAAATTTGCAAAATCTGGGTCTTTCTCAGGTGTAATTGCACTTGATTTCTCTGAGAATATGCTCCTTCAATGTTATGATTTCATTAAGAAAGATGCTACTCTTTTGAACAGTAATCTTGCTCTTGTGAGGGCAGATATCTCTAGGCTTCCCTTTTCATCAGGATCAGTGGATGCTGTTCATGCTGGTGCAGCGTTGCATTGTTGGCCATCTCCTTCCAATGCTGTAAGGATTTTGTCTTGTAGATCATATTCTATTATTCGATTTCCTACCAGTGGTCATAATCCGCTGAATTCAATCAGTTATAATGGACTCAAATCATATGGAACAATATACATTGTCGTGTCTGAAACAATGGCAGATTCTAATGGCCAATCGATTGCTGAGATCACTCGTATAATGCGCAGTGGTGGAGTATTTGTGGGAACCACTTTTTTGCGGTACACTTCATCTACTCCCTGGTATATAAGATTTTCTAGAGAGCGTGCTTTTCAGAACTTTGGCTACTTAATTGAGGAAGAAATAGAGGATTTGTGCAAATCCTGCGGTCTGATTAACTATTCAAGCAAAGTTCAGCAATCTTTCATTATGTTCTCTGCGCAGAAGCCTTGA MAVATFFPSQTSYNNRHLLSRDIRFRSPLRLSTRRSFFSTIRASSTLVLESDLGIQQDQNSKIDVFSCPVCYEPLLRKGPPGFNLPAIYRSGFKCRRCNKSYTSKNIFLDLTVTSGMKEYVEVKPGGTELFRSPLVSFLYERGWRQNFNRSGFPGLDEEFKMAMEYFKPVEGGLLVDASCGSGLFSRKFAKSGSFSGVIALDFSENMLLQCYDFIKKDATLLNSNLALVRADISRLPFSSGSVDAVHAGAALHCWPSPSNAVRILSCRSYSIIRFPTSGHNPLNSISYNGLKSYGTIYIVVSETMADSNGQSIAEITRIMRSGGVFVGTTFLRYTSSTPWYIRFSRERAFQNFGYLIEEEIEDLCKSCGLINYSSKVQQSFIMFSAQKP Homology
BLAST of ClCG02G017190.2 vs. NCBI nr
Match: XP_038889838.1 (uncharacterized methyltransferase At2g41040, chloroplastic [Benincasa hispida]) HSP 1 Score: 642.9 bits (1657), Expect = 1.8e-180 Identity = 328/389 (84.32%), Postives = 332/389 (85.35%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. NCBI nr
Match: XP_023536953.1 (uncharacterized methyltransferase At2g41040, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 617.8 bits (1592), Expect = 6.2e-173 Identity = 314/389 (80.72%), Postives = 325/389 (83.55%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. NCBI nr
Match: XP_008456635.1 (PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 617.5 bits (1591), Expect = 8.1e-173 Identity = 316/389 (81.23%), Postives = 325/389 (83.55%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. NCBI nr
Match: XP_022142970.1 (uncharacterized methyltransferase At2g41040, chloroplastic [Momordica charantia]) HSP 1 Score: 615.1 bits (1585), Expect = 4.0e-172 Identity = 317/389 (81.49%), Postives = 324/389 (83.29%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. NCBI nr
Match: XP_022965827.1 (uncharacterized methyltransferase At2g41040, chloroplastic [Cucurbita maxima]) HSP 1 Score: 614.8 bits (1584), Expect = 5.2e-172 Identity = 313/389 (80.46%), Postives = 323/389 (83.03%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. ExPASy Swiss-Prot
Match: Q0WPT7 (Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g41040 PE=1 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 2.0e-110 Identity = 215/388 (55.41%), Postives = 262/388 (67.53%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. ExPASy Swiss-Prot
Match: Q8LBV4 (Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g78140 PE=1 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 4.6e-70 Identity = 161/387 (41.60%), Postives = 208/387 (53.75%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. ExPASy TrEMBL
Match: A0A1S3C4D9 (uncharacterized methyltransferase At2g41040, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496525 PE=4 SV=1) HSP 1 Score: 617.5 bits (1591), Expect = 3.9e-173 Identity = 316/389 (81.23%), Postives = 325/389 (83.55%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. ExPASy TrEMBL
Match: A0A6J1CMF3 (uncharacterized methyltransferase At2g41040, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012967 PE=4 SV=1) HSP 1 Score: 615.1 bits (1585), Expect = 1.9e-172 Identity = 317/389 (81.49%), Postives = 324/389 (83.29%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. ExPASy TrEMBL
Match: A0A6J1HLD0 (uncharacterized methyltransferase At2g41040, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465594 PE=4 SV=1) HSP 1 Score: 614.8 bits (1584), Expect = 2.5e-172 Identity = 313/389 (80.46%), Postives = 323/389 (83.03%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. ExPASy TrEMBL
Match: A0A5A7VAW1 (Putative methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00970 PE=4 SV=1) HSP 1 Score: 612.8 bits (1579), Expect = 9.6e-172 Identity = 316/390 (81.03%), Postives = 325/390 (83.33%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. ExPASy TrEMBL
Match: A0A1S3C3A2 (uncharacterized methyltransferase At2g41040, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496525 PE=4 SV=1) HSP 1 Score: 612.8 bits (1579), Expect = 9.6e-172 Identity = 316/390 (81.03%), Postives = 325/390 (83.33%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. TAIR 10
Match: AT2G41040.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 400.6 bits (1028), Expect = 1.4e-111 Identity = 215/388 (55.41%), Postives = 262/388 (67.53%), Query Frame = 0
BLAST of ClCG02G017190.2 vs. TAIR 10
Match: AT1G78140.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 266.5 bits (680), Expect = 3.3e-71 Identity = 161/387 (41.60%), Postives = 208/387 (53.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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