ClCG02G013890.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G013890.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Low temperature and salt responsive protein family
Location	CG_Chr02: 28016545 .. 28017190 (-)
Sequence length	544
RNA-Seq Expression	ClCG02G013890.1
Synteny	ClCG02G013890.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTGTACAAATATCCCCTCAAAATCAAGATACAGCAAAAGTGCCACACGTGTTAATCCTTCTCCCACGTGTCATTCCCAAAAGCTTAAACCATTGCCACCTTCCCCCCTGGTTTTTGGGTTTCCCTTCCAAATTGAAAACATAAAAAACCCCATTTATGCTTTCCCCAAAGTTCCTCTTATGCTGAAAGAGAAAGTTATGGGTTCTGAGACTTTTGTAGAAATCATATTAGCAATACTTCTACCACCACTTGGAGTTTTCCTTCGCTATGGCTGTGGGGTGTGATTTCTTCAAACTCTGTTTTTCATTTTACACAACTTGTGTTTCTTCTCTTTCAATTTGTGTTTTGTTGATCAGTTTTTCATGTGCTCTTAAGTGCAGGTGGAGTTTTGGATTTGTTTGTTGCTGACCATCTTGGGATATATACCTGGAATTATATATGCAATTTATGTTCTTGTTGGGTAAAAGAAAGGGAAGGACTTGAAAGTGTAATTTTGTGAATGTGTGTTTTCAACTGTAGGTTTTACAAGGTTTTTGTTTTGTTTGTTCTTGGTTGTTTGGATGTAAGTTTGTGGTAAATCAGTGAAGAATAGAAATTTTGTCATTTATTTTGATGAGAATGAGTTTTTGGTTTTAGTCTTCC

mRNA sequence

ATGATTTGTACAAATATCCCCTCAAAATCAAGATACAGCAAAAGTGCCACACGTGTTAATCCTTCTCCCACGTGTCATTCCCAAAAGCTTAAACCATTGCCACCTTCCCCCCTGGTTTTTGGGTTTCCCTTCCAAATTGAAAACATAAAAAACCCCATTTATGCTTTCCCCAAAGTTCCTCTTATGCTGAAAGAGAAAGTTATGGGTTCTGAGACTTTTGTAGAAATCATATTAGCAATACTTCTACCACCACTTGGAGTTTTCCTTCGCTATGGCTGTGGGGTGGAGTTTTGGATTTGTTTGTTGCTGACCATCTTGGGATATATACCTGGAATTATATATGCAATTTATGTTCTTGTTGGGTAAAAGAAAGGGAAGGACTTGAAAGTGTAATTTTGTGAATGTGTGTTTTCAACTGTAGGTTTTACAAGGTTTTTGTTTTGTTTGTTCTTGGTTGTTTGGATGTAAGTTTGTGGTAAATCAGTGAAGAATAGAAATTTTGTCATTTATTTTGATGAGAATGAGTTTTTGGTTTTAGTCTTCC

Coding sequence (CDS)

ATGATTTGTACAAATATCCCCTCAAAATCAAGATACAGCAAAAGTGCCACACGTGTTAATCCTTCTCCCACGTGTCATTCCCAAAAGCTTAAACCATTGCCACCTTCCCCCCTGGTTTTTGGGTTTCCCTTCCAAATTGAAAACATAAAAAACCCCATTTATGCTTTCCCCAAAGTTCCTCTTATGCTGAAAGAGAAAGTTATGGGTTCTGAGACTTTTGTAGAAATCATATTAGCAATACTTCTACCACCACTTGGAGTTTTCCTTCGCTATGGCTGTGGGGTGGAGTTTTGGATTTGTTTGTTGCTGACCATCTTGGGATATATACCTGGAATTATATATGCAATTTATGTTCTTGTTGGGTAA

Protein sequence

MICTNIPSKSRYSKSATRVNPSPTCHSQKLKPLPPSPLVFGFPFQIENIKNPIYAFPKVPLMLKEKVMGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

Homology

[Close]

BLAST of ClCG02G013890.1 vs. NCBI nr
Match: KAG7030774.1 (Hydrophobic protein RCI2A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.8 bits (268), Expect = 6.5e-20
Identity = 53/56 (94.64%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 64  KEKVMGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 120
           +E++MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL
Sbjct: 55  RERIMGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 110

[Close]

BLAST of ClCG02G013890.1 vs. NCBI nr
Match: XP_004143609.2 (uncharacterized protein LOC101203086 [Cucumis sativus] >KAE8647966.1 hypothetical protein Csa_000540 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 6.5e-20
Identity = 62/88 (70.45%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 37  PLVFGFPFQIENIKNPIYAFPKVPLMLKEK---VMGSETFVEIILAILLPPLGVFLRYGC 96
           P  FG P  ++   + ++  PK      EK    MGSETFVEIILAILLPPLGVFLRYGC
Sbjct: 32  PTTFGSPHSLQT--SHLWFPPKFFSFGTEKEKEEMGSETFVEIILAILLPPLGVFLRYGC 91

Query: 97  GVEFWICLLLTILGYIPGIIYAIYVLVG 122
           GVEFWICLLLTILGYIPGIIYAIYVLVG
Sbjct: 92  GVEFWICLLLTILGYIPGIIYAIYVLVG 117

[Close]

BLAST of ClCG02G013890.1 vs. NCBI nr
Match: XP_022941664.1 (low temperature-induced protein lt101.2 [Cucurbita moschata] >XP_022941665.1 low temperature-induced protein lt101.2 [Cucurbita moschata] >XP_022999688.1 low temperature-induced protein lt101.2 [Cucurbita maxima] >XP_022999696.1 low temperature-induced protein lt101.2 [Cucurbita maxima] >XP_023554157.1 low temperature-induced protein lt101.2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 122
           MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Sbjct: 1   MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]

BLAST of ClCG02G013890.1 vs. NCBI nr
Match: XP_038893278.1 (low temperature-induced protein lt101.2 [Benincasa hispida])

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 122
           MGSETFVEI+LAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Sbjct: 1   MGSETFVEILLAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]

BLAST of ClCG02G013890.1 vs. NCBI nr
Match: XP_026412058.1 (low temperature-induced protein lt101.2 [Papaver somniferum])

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 122
           MGSETFVEIILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Sbjct: 1   MGSETFVEIILAILLPPIGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy Swiss-Prot
Match: Q9ZNQ7 (Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-18
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 120
           M + TFV+II+AILLPPLGVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL
Sbjct: 1   MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy Swiss-Prot
Match: Q9ARD5 (Low temperature-induced protein lt101.2 OS=Hordeum vulgare OX=4513 GN=LT101.2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-17
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV 121
           M S TF+E+ILAI+LPP+GVFLRYG  VEFWICLLLT+LGYIPGIIYA+YVLV
Sbjct: 1   MASATFIEVILAIILPPVGVFLRYGLAVEFWICLLLTLLGYIPGIIYAVYVLV 53

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy Swiss-Prot
Match: P68178 (Salt stress-induced hydrophobic peptide ESI3 OS=Thinopyrum elongatum OX=4588 GN=ESI3 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.3e-17
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV 121
           MGS T +E+ILAI+LPP+GVFLRY  GVEFWICLLLTILGYIPGIIYA+YVLV
Sbjct: 1   MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy Swiss-Prot
Match: P68179 (Low temperature-induced protein lt101.1 OS=Hordeum vulgare OX=4513 GN=LT101.1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.3e-17
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV 121
           MGS T +E+ILAI+LPP+GVFLRY  GVEFWICLLLTILGYIPGIIYA+YVLV
Sbjct: 1   MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy Swiss-Prot
Match: Q9ZNS6 (Hydrophobic protein RCI2B OS=Arabidopsis thaliana OX=3702 GN=RCI2B PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15
Identity = 37/52 (71.15%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 120
           M + TFVEIILAI+LPPLGVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++
Sbjct: 1   MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYII 52

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy TrEMBL
Match: A0A6J1KKG3 (low temperature-induced protein lt101.2 OS=Cucurbita maxima OX=3661 GN=LOC111493964 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.3e-20
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 122
           MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Sbjct: 1   MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy TrEMBL
Match: A0A6J1FUC5 (low temperature-induced protein lt101.2 OS=Cucurbita moschata OX=3662 GN=LOC111446956 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.3e-20
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 122
           MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Sbjct: 1   MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy TrEMBL
Match: A0A0A0KRZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175890 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.3e-20
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 122
           MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Sbjct: 1   MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy TrEMBL
Match: A0A1S3BED1 (low temperature-induced protein lt101.2 OS=Cucumis melo OX=3656 GN=LOC103488748 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.1e-20
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 122
           MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYV+VG
Sbjct: 1   MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVIVG 54

[Close]

BLAST of ClCG02G013890.1 vs. ExPASy TrEMBL
Match: A0A6J1CCW8 (low temperature-induced protein lt101.2 OS=Momordica charantia OX=3673 GN=LOC111010062 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 122
           MGSETFVEIILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Sbjct: 1   MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]

BLAST of ClCG02G013890.1 vs. TAIR 10
Match: AT2G38905.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 104.8 bits (260), Expect = 5.1e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 122
           MGSETF+EIILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Sbjct: 1   MGSETFLEIILAILLPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]

BLAST of ClCG02G013890.1 vs. TAIR 10
Match: AT3G05880.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 92.0 bits (227), Expect = 3.4e-19
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 120
           M + TFV+II+AILLPPLGVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL
Sbjct: 1   MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52

[Close]

BLAST of ClCG02G013890.1 vs. TAIR 10
Match: AT3G05890.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 84.3 bits (207), Expect = 7.1e-17
Identity = 37/52 (71.15%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 120
           M + TFVEIILAI+LPPLGVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++
Sbjct: 1   MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYII 52

[Close]

BLAST of ClCG02G013890.1 vs. TAIR 10
Match: AT1G57550.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 73.9 bits (180), Expect = 9.6e-14
Identity = 35/52 (67.31%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 68  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 120
           MGS  F+E++ AI +PP+GVFLRYG G+EFW+CLLLT+  +IPG+IYAIYVL
Sbjct: 1   MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVL 50

[Close]

BLAST of ClCG02G013890.1 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0


Query: 71  ETFVEIILAILLPPLGVFLRYG-CGVEFWICLLLTILGYIPGIIYAIYVLV 121
           E F EI++AILLPPLGV L+ G C VEF ICL+LTILGYIPGIIYA+YV+V
Sbjct: 6   EVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIV 56

The following BLAST results are available for this feature:

BLAST of ClCG02G013890.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030774.1	6.5e-20	94.64	Hydrophobic protein RCI2A, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004143609.2	6.5e-20	70.45	uncharacterized protein LOC101203086 [Cucumis sativus] >KAE8647966.1 hypothetica...	[more]
XP_022941664.1	1.1e-19	100.00	low temperature-induced protein lt101.2 [Cucurbita moschata] >XP_022941665.1 low...	[more]
XP_038893278.1	1.9e-19	98.15	low temperature-induced protein lt101.2 [Benincasa hispida]	[more]
XP_026412058.1	1.9e-19	98.15	low temperature-induced protein lt101.2 [Papaver somniferum]	[more]

BLAST of ClCG02G013890.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNQ7	4.8e-18	84.62	Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1	[more]
Q9ARD5	2.4e-17	81.13	Low temperature-induced protein lt101.2 OS=Hordeum vulgare OX=4513 GN=LT101.2 PE...	[more]
P68178	5.3e-17	83.02	Salt stress-induced hydrophobic peptide ESI3 OS=Thinopyrum elongatum OX=4588 GN=...	[more]
P68179	5.3e-17	83.02	Low temperature-induced protein lt101.1 OS=Hordeum vulgare OX=4513 GN=LT101.1 PE...	[more]
Q9ZNS6	1.0e-15	71.15	Hydrophobic protein RCI2B OS=Arabidopsis thaliana OX=3702 GN=RCI2B PE=2 SV=1	[more]

BLAST of ClCG02G013890.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KKG3	5.3e-20	100.00	low temperature-induced protein lt101.2 OS=Cucurbita maxima OX=3661 GN=LOC111493...	[more]
A0A6J1FUC5	5.3e-20	100.00	low temperature-induced protein lt101.2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0KRZ2	5.3e-20	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175890 PE=3 SV=1	[more]
A0A1S3BED1	9.1e-20	98.15	low temperature-induced protein lt101.2 OS=Cucumis melo OX=3656 GN=LOC103488748 ...	[more]
A0A6J1CCW8	1.2e-19	98.15	low temperature-induced protein lt101.2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of ClCG02G013890.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38905.1	5.1e-23	96.30	Low temperature and salt responsive protein family	[more]
AT3G05880.1	3.4e-19	84.62	Low temperature and salt responsive protein family	[more]
AT3G05890.1	7.1e-17	71.15	Low temperature and salt responsive protein family	[more]
AT1G57550.1	9.6e-14	67.31	Low temperature and salt responsive protein family	[more]
AT4G30650.1	2.4e-12	74.51	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 73..119 e-value: 2.9E-20 score: 72.2
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 68..120
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 77..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR21659:SF96	BNAA04G22250D PROTEIN	coord: 68..120

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG02G013890	ClCG02G013890	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G013890.1-exon	ClCG02G013890.1-exon-CG_Chr02:28016545..28016806	exon
ClCG02G013890.1-exon	ClCG02G013890.1-exon-CG_Chr02:28016909..28017190	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G013890.1-three_prime_utr	ClCG02G013890.1-three_prime_utr-CG_Chr02:28016545..28016722	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G013890.1-cds	ClCG02G013890.1-cds-CG_Chr02:28016723..28016806	CDS
ClCG02G013890.1-cds	ClCG02G013890.1-cds-CG_Chr02:28016909..28017190	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG02G013890.1	ClCG02G013890.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane