ClCG02G010880.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G010880.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Heavy metal-associated isoprenylated plant protein 16-like
Location	CG_Chr02: 22212834 .. 22213504 (-)
Sequence length	357
RNA-Seq Expression	ClCG02G010880.1
Synteny	ClCG02G010880.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTACGTTACCAATACTACTTTTCATGCATGAGTTCCGTTGGTTTTTTTTCTTTTCCCCTTAAAGAACATTTTCAAAATCTCAGCTAAATATGGAGAAGTTTGTTTCATTTTTAGGATTTGATTAGACGTGATTTCCAAAAAATAGAAAAGTAAAAATAAAATCATTAGCAGATAGAGCTTTTAACTTCTAACTCAGATCATACCTCACTTTAACAATTGCAGCAAACGATAGTGATCCGAGTGTCGATGAAGAGGGGATCCAAGTACCGCAGCAAAGCTTTGAAGATTGCAGCATCTGTCTCAAGTAATTAAACATACATATAAGATAATTTATTTAAATATTGAAAATATTTAAAAATATATCCAAGGATAGTTAATTTACGATGGGAATTACAGGTAATATTGAGAAAATTAGCTTGGTCGGGGACGATAAAGATAAAGTGGAGGTAGTTGGAGATCTCGATCCAATAAAACTTACTGAAGTGCTGCGAAAGGGTTTTGGCTCCGCACATTTGGAGTCAGTGAGCCTAGTTGAAGACAAAGACAAAGACAAAGACAAAGATAAAGAACCTGGTATAACGTGGACATGCTCGTGGGGTGTGCCTCATCAATCATCTTATTGTTATTGCTACCTTGGCCCCTACCCTTCCTATTCTATATGGTGA

mRNA sequence

ATGAAGCAAACGATAGTGATCCGAGTGTCGATGAAGAGGGGATCCAAGTACCGCAGCAAAGCTTTGAAGATTGCAGCATCTGTCTCAAGTAATATTGAGAAAATTAGCTTGGTCGGGGACGATAAAGATAAAGTGGAGGTAGTTGGAGATCTCGATCCAATAAAACTTACTGAAGTGCTGCGAAAGGGTTTTGGCTCCGCACATTTGGAGTCAGTGAGCCTAGTTGAAGACAAAGACAAAGACAAAGACAAAGATAAAGAACCTGGTATAACGTGGACATGCTCGTGGGGTGTGCCTCATCAATCATCTTATTGTTATTGCTACCTTGGCCCCTACCCTTCCTATTCTATATGGTGA

Coding sequence (CDS)

ATGAAGCAAACGATAGTGATCCGAGTGTCGATGAAGAGGGGATCCAAGTACCGCAGCAAAGCTTTGAAGATTGCAGCATCTGTCTCAAGTAATATTGAGAAAATTAGCTTGGTCGGGGACGATAAAGATAAAGTGGAGGTAGTTGGAGATCTCGATCCAATAAAACTTACTGAAGTGCTGCGAAAGGGTTTTGGCTCCGCACATTTGGAGTCAGTGAGCCTAGTTGAAGACAAAGACAAAGACAAAGACAAAGATAAAGAACCTGGTATAACGTGGACATGCTCGTGGGGTGTGCCTCATCAATCATCTTATTGTTATTGCTACCTTGGCCCCTACCCTTCCTATTCTATATGGTGA

Protein sequence

MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVLRKGFGSAHLESVSLVEDKDKDKDKDKEPGITWTCSWGVPHQSSYCYCYLGPYPSYSIW

Homology

[Close]

BLAST of ClCG02G010880.1 vs. NCBI nr
Match: XP_038900437.1 (uncharacterized protein LOC120087662 [Benincasa hispida])

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 100/118 (84.75%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVL 60
           MKQ IVIRVSMKRG KYRSKALKIA+SV  N+E ISLVGDDKDKVEVVGDLDPI+LT++L
Sbjct: 1   MKQKIVIRVSMKRGPKYRSKALKIASSVKGNVETISLVGDDKDKVEVVGDLDPIELTKLL 60

Query: 61  RKGFGSAHLESVSLVEDKDKDKDKDKEPGITWTCSWGVPHQSSYCYCYLGPYPSYSIW 119
           RK FGSA LESV+ VE+KDKDKDKDKE GITWTC+WGVPHQSS CYCYLGPYPSYSIW
Sbjct: 61  RKSFGSAQLESVNAVEEKDKDKDKDKELGITWTCTWGVPHQSSQCYCYLGPYPSYSIW 118

[Close]

BLAST of ClCG02G010880.1 vs. NCBI nr
Match: XP_008448137.1 (PREDICTED: uncharacterized protein LOC103490424 [Cucumis melo])

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-46
Identity = 100/120 (83.33%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVL 60
           MKQ IVIRVSMKRG KYRSKALKIAASV  +IE ISLVGDDKDKVEVVGD+DP++LTE+L
Sbjct: 1   MKQKIVIRVSMKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPMELTELL 60

Query: 61  RKGFGSAHLESVSLVEDKDKDKDKD--KEPGITWTCSWGVPHQSSYCYCY-LGPYPSYSI 118
           RKGFGSA LE+V+ VEDKDKDKDKD  K+ GITWTCSWGVPH SSYCYCY LGPYPSYSI
Sbjct: 61  RKGFGSAQLETVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 120

[Close]

BLAST of ClCG02G010880.1 vs. NCBI nr
Match: KAG7010798.1 (Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.7 bits (478), Expect = 2.8e-44
Identity = 97/123 (78.86%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 1   MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVL 60
           MKQ IVIRVSMKRG+KYRSKALKIAASVS +IE ISLVGDDKDK+EVVGDLDPI+LTE+L
Sbjct: 1   MKQKIVIRVSMKRGAKYRSKALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELTEML 60

Query: 61  RKGFGSAHLESVSLV----EDKDKDKDKDK-EPGITWTCSWGVPHQSSYCYCYLGPYPSY 119
           RK FG A LESVS+V    ED+D +KDKD+ EP ITWTCSWGVPHQ++YCYCY  PYPSY
Sbjct: 61  RKRFGCAQLESVSVVEAKKEDEDMNKDKDENEPQITWTCSWGVPHQTAYCYCYHCPYPSY 120

[Close]

BLAST of ClCG02G010880.1 vs. NCBI nr
Match: XP_004140067.1 (uncharacterized protein LOC101216311 [Cucumis sativus] >KGN46623.1 hypothetical protein Csa_005620 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 2.8e-44
Identity = 98/119 (82.35%), Postives = 104/119 (87.39%), Query Frame = 0


Query: 1   MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVL 60
           MKQ IVI+VSMKRG KYRSKALKIAASV  +IE ISLVGD KDKVEVVGDLDPI+LTE+L
Sbjct: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60

Query: 61  RKGFGSAHLESVSLVEDKDKDKDKDKEPGITWTCSWGVPHQSSYCYCY-LGPYPSYSIW 119
           RKGFGSA LESVS VEDK+K KDKD   GITWTCSWGVPH SSYCYCY L PYPS+SIW
Sbjct: 61  RKGFGSAQLESVSAVEDKEKKKDKD--DGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 117

[Close]

BLAST of ClCG02G010880.1 vs. NCBI nr
Match: XP_022987042.1 (uncharacterized protein LOC111484603 [Cucurbita maxima])

HSP 1 Score: 184.1 bits (466), Expect = 6.9e-43
Identity = 97/125 (77.60%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 1   MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVL 60
           MKQ IVIRVSMKRGSKYRS+ALKIAASVS +IE ISLVGDDKDK+EVVGDLDPI+L ++L
Sbjct: 1   MKQKIVIRVSMKRGSKYRSQALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELIKML 60

Query: 61  RKGFGSAHLESVSLV----EDKDKDKDKDK---EPGITWTCSWGVPHQSSYCYCYLGPYP 119
           RK FG A LESVS+V    EDK+KDKDKDK   EP ITW CS GVPHQ+ YCYCY GPYP
Sbjct: 61  RKKFGCAQLESVSVVEVKNEDKNKDKDKDKNENEPQITWMCSSGVPHQTPYCYCYHGPYP 120

[Close]

BLAST of ClCG02G010880.1 vs. ExPASy TrEMBL
Match: A0A1S3BIE5 (uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.5e-47
Identity = 100/120 (83.33%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVL 60
           MKQ IVIRVSMKRG KYRSKALKIAASV  +IE ISLVGDDKDKVEVVGD+DP++LTE+L
Sbjct: 1   MKQKIVIRVSMKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPMELTELL 60

Query: 61  RKGFGSAHLESVSLVEDKDKDKDKD--KEPGITWTCSWGVPHQSSYCYCY-LGPYPSYSI 118
           RKGFGSA LE+V+ VEDKDKDKDKD  K+ GITWTCSWGVPH SSYCYCY LGPYPSYSI
Sbjct: 61  RKGFGSAQLETVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 120

[Close]

BLAST of ClCG02G010880.1 vs. ExPASy TrEMBL
Match: A0A0A0KAU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44
Identity = 98/119 (82.35%), Postives = 104/119 (87.39%), Query Frame = 0


Query: 1   MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVL 60
           MKQ IVI+VSMKRG KYRSKALKIAASV  +IE ISLVGD KDKVEVVGDLDPI+LTE+L
Sbjct: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60

Query: 61  RKGFGSAHLESVSLVEDKDKDKDKDKEPGITWTCSWGVPHQSSYCYCY-LGPYPSYSIW 119
           RKGFGSA LESVS VEDK+K KDKD   GITWTCSWGVPH SSYCYCY L PYPS+SIW
Sbjct: 61  RKGFGSAQLESVSAVEDKEKKKDKD--DGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 117

[Close]

BLAST of ClCG02G010880.1 vs. ExPASy TrEMBL
Match: A0A6J1J992 (uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.4e-43
Identity = 97/125 (77.60%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 1   MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVL 60
           MKQ IVIRVSMKRGSKYRS+ALKIAASVS +IE ISLVGDDKDK+EVVGDLDPI+L ++L
Sbjct: 1   MKQKIVIRVSMKRGSKYRSQALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELIKML 60

Query: 61  RKGFGSAHLESVSLV----EDKDKDKDKDK---EPGITWTCSWGVPHQSSYCYCYLGPYP 119
           RK FG A LESVS+V    EDK+KDKDKDK   EP ITW CS GVPHQ+ YCYCY GPYP
Sbjct: 61  RKKFGCAQLESVSVVEVKNEDKNKDKDKDKNENEPQITWMCSSGVPHQTPYCYCYHGPYP 120

[Close]

BLAST of ClCG02G010880.1 vs. ExPASy TrEMBL
Match: A0A6J1FYA9 (uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC111449069 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.4e-43
Identity = 95/123 (77.24%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1   MKQTIVIRVSMKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVL 60
           MKQ IVIRVSMKRG+KYRS+ALKIAASV  +IE ISLVGDDKDK+EVVGDLDPI+LTE+L
Sbjct: 1   MKQKIVIRVSMKRGAKYRSQALKIAASVLGDIETISLVGDDKDKIEVVGDLDPIELTEML 60

Query: 61  RKGFGSAHLESVSLV----EDKDKDKDKDK-EPGITWTCSWGVPHQSSYCYCYLGPYPSY 119
           RK FG A LESVS+V    ED+D +KDKD+ EP ITWTCSWGVPHQ+ YCYCY  PYPSY
Sbjct: 61  RKRFGCAQLESVSVVEAKKEDEDVNKDKDENEPQITWTCSWGVPHQTPYCYCYHCPYPSY 120

[Close]

BLAST of ClCG02G010880.1 vs. ExPASy TrEMBL
Match: A0A5A7UY93 (Putative Heavy metal transport/detoxification superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001130 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.7e-43
Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 11  MKRGSKYRSKALKIAASVSSNIEKISLVGDDKDKVEVVGDLDPIKLTEVLRKGFGSAHLE 70
           MKRG KYRSKALKIAASV  +IE ISLVGDDKDKVEVVGD+DPI+LTE+LRKGFGSA LE
Sbjct: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPIELTELLRKGFGSAQLE 60

Query: 71  SVSLVEDKDKDKDKD--KEPGITWTCSWGVPHQSSYCYCY-LGPYPSYSI 118
           +V+ VEDKDKDKDKD  K+ GITWTCSWGVPH SSYCYCY LGPYPSYSI
Sbjct: 61  TVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 110

The following BLAST results are available for this feature:

BLAST of ClCG02G010880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900437.1	1.7e-49	84.75	uncharacterized protein LOC120087662 [Benincasa hispida]	[more]
XP_008448137.1	1.8e-46	83.33	PREDICTED: uncharacterized protein LOC103490424 [Cucumis melo]	[more]
KAG7010798.1	2.8e-44	78.86	Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyro...	[more]
XP_004140067.1	2.8e-44	82.35	uncharacterized protein LOC101216311 [Cucumis sativus] >KGN46623.1 hypothetical ...	[more]
XP_022987042.1	6.9e-43	77.60	uncharacterized protein LOC111484603 [Cucurbita maxima]	[more]

BLAST of ClCG02G010880.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G010880.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIE5	8.5e-47	83.33	uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=...	[more]
A0A0A0KAU7	1.4e-44	82.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1	[more]
A0A6J1J992	3.4e-43	77.60	uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603...	[more]
A0A6J1FYA9	4.4e-43	77.24	uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC1114490...	[more]
A0A5A7UY93	5.7e-43	83.64	Putative Heavy metal transport/detoxification superfamily protein OS=Cucumis mel...	[more]

BLAST of ClCG02G010880.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 1..78 e-value: 3.3E-19 score: 70.8
None	No IPR available	PANTHER	PTHR46371:SF7	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 46	coord: 3..87
IPR044296	Heavy metal-associated isoprenylated plant protein 16/46/47	PANTHER	PTHR46371	OS04G0464100 PROTEIN	coord: 3..87

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG02G010880	ClCG02G010880	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G010880.1-exon	ClCG02G010880.1-exon-CG_Chr02:22212834..22213102	exon
ClCG02G010880.1-exon	ClCG02G010880.1-exon-CG_Chr02:22213195..22213276	exon
ClCG02G010880.1-exon	ClCG02G010880.1-exon-CG_Chr02:22213499..22213504	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G010880.1-cds	ClCG02G010880.1-cds-CG_Chr02:22212834..22213102	CDS
ClCG02G010880.1-cds	ClCG02G010880.1-cds-CG_Chr02:22213195..22213276	CDS
ClCG02G010880.1-cds	ClCG02G010880.1-cds-CG_Chr02:22213499..22213504	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG02G010880.1	ClCG02G010880.1-protein	polypeptide