ClCG02G007470.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G007470.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Gag/pol polyprotein-maize retrotransposon Hopscotch
Location	CG_Chr02: 8860059 .. 8863319 (+)
Sequence length	957
RNA-Seq Expression	ClCG02G007470.1
Synteny	ClCG02G007470.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACTCCTTCTTCCTCACAGAAGAATGCTTCAACCAGAAACAATTCCACACCAGCTATTGAACATTATCAGGTATGGTCTAGAACTTGCCTTGCTGGAAATCCTTTCTTCACAAATTTGTTGAATCAAGTGACCTTCATCAAGTTGGATAGAGGAAATTTCTTGCTTTGGTAGAAGATTGTGCTCCCAATTCCAAGAAGCTACAAATTGGAGGGTCATCTCATGGGTAAGTCACCAGCCCCTAAGCACTCCATTGTTATTCATCAATGTAAAGAAGATCATACTGGACTGGTACTACCAAATCTAGAGTATGATATTTGGCTGGTTGCTGATCAACTGTTAGTTGGGTGGTTGTATAACTCAATGACACCCAAAGTCACTGCTCAAGTTATGGGCTACGATGAGCTAAGCTGCTGTGGGATGCCATCCAAGAGTACTTCAGTATTCAATCAAGATCCCAAGAGGATTATTATCGTCAAATGATGCAACAGACAAGGAAAAGAATTATGAAAATGTAGGAATACTTGGCTGTCATGAAGAAATTCTATGATAATCTTTTGTAGGATAGATCTCCTATGGATTTTAGGAGCTTTATTTCACATGTTTTTGCAGGTCTTGATGAAGAATATAACCCCATTATTTGTGTTATTTGGAGCCAAGATCTCACTTGGAATAAGATTCAATATAAGCTTCTTTCTTATGAACAACGACATGAAAAACTCCAGGAGTTCAAGGGAAGTCTAACTTTAAACCAACCTACTTTGAATTATGCTGCAGTAGACAGAAAGTAGTCAAATCCTTCACAAGCCAACTGTAGAAACAACCATAACAACAACAACAATAATACTAGAGGAGGCAACAACAGAAATAGAGGCAGAAGTTGATACTCTCCTTATCCTCAACAAAAAAAAAACCCACTTGTCAAATTTGTGGCAAATATGGCTATGTTGCTGATGTGTGCTATTAGAGGTATCACAAGGAAGAAAATGAGAATGCAAGCAATTCTTCATCAACAAATCAGAATACTACCAATCCCACTGCTCTTATGGGCTACCCTAACACTCTTCAAGACTTCTCCTAGTACTTGGACAGCGGAGCTACAAATCATGTTACTACCGACCTTCAAAAACTTTTTGAAGGGTAAGTACATTGGCTCAACTTCTATTATGGTTGGAAATGGTACCTGTTGGGTTTTATGTCTTAAAACTCGTTGTTTGTAATTTATGGATTTTATTCTCAATAAAGTTGTTATCGAGGTTTATTCAGTAAAGTTGTTATTGAATATGTGAATTGCATTTAAATCCAATAAACTAAGAATCTATGGCTATATAGTGAATGCTTAGACTTTATATGATAAAAGTGGATCAAGTTTAAGTAATAGCCAAAATGGTCTATAGTATATGGATAAAAGTTGGGTACCTTATCCTGGGGATACTATGGATACGACTCATTTAGTATTTGATACAAATGATGTGATCCTAAATCGTTCATGTAGAGACATGTGAGTGGGGGTATCTTATGCAATGAGTTTGCATAAGACTGGTCTAAGAAATAATCACGTTTACTTTATAACACTGTTTACTGTTAAAACTGATTATTTCAACTTGATGACCTAAGTAACTTGATCTTAATCCTGAGCTAACTATGAACTCCTGTTTGTTTGAGATTATCTTTTAATTTGCATGGGTGAGAGTGGCCAATTTGTCGACTCAATATGCCCCCCATTTTAGGGATAAGATCAGGCAAATAGCTGGGGACATAGTTCTGCAAGATGAAATTCACTCATACCTTATTAAAGGATAGTAGATAAGTTATTCTCTTAAGTATTGAATCCAAGTCTTGAACAAGGGGCCCCACTCTTTCATTCGCCCGAGAGGGATTCGGTTTATTAGTTGGACCACAAACTAATTGTTCATTAGAGGATCAGTGGGACTTAAGGAACAAGAAGTAATTACAGGGGTAAAACGATATTTTGACCCAGCTGTAATTACGAATAACTTGTGAAAGATCGACTTACTAATTATGGTTATTTCAAATGGATAGAAATATATCTACAGTGAGGAGAGTGCAACTACTGGGCTTTAGTGGAGTAACCCAGTAGTTAACGAATGTTAATTAACTAGGTTAAAAATTTTAATCGGTTAATTTCGGATCGTTAAAGCTCATGATCTGTAGGTCTATTAGGTCCCCTTGTTAGCTCATGGACTAAACCTTAGAATAGTATATTGAGACAATTTGAAGTGTTCAAACTTAGAAAAATGAGTGTTTTCTGATTTGGTTCGTTTAATTGTGAATTAGACAAATTGAGATTTTTAATAATATTTAAATGTGATTTAAATATTATATCCGTGAATAGAGATTCATCGAGTTTGAAATTGTCGGAAAAGTTGAAAAGTATTAATTTAATATTAATTTAATATAATTAATTAATTGGTTAATTAATTATTATTTAAATTAAGTATATTAAATTGAAATTTTAATTTATGAAATCAAAATTGATTTCTCAAATTTTCAAATTGAGAACATTACTTTCGGTTGCATGGTGAAGGAGGAGGTGGAGACCTCTCCTTCACATGCAAATTCTTTTGCCTTGAAAGCATCTTATTCACATTTGTGGTGTCTTTCAGCATGTGTACTTAAGTTGCATGGTTTCTTTTTAAATAAGGAAGAAAAAGCTAAAAGTTGAGGTTTTGAGATTTTGACCAAAAAGAACTTTACGGGAAAGTCTTTTTAAAAAGAACCGAGAGTGTGTTCTTCAGTTTTGCTCCAATTTTTTGCTCAAATTTGGATCCCACCATCTGTTATAAGGCCTGAGAATAACAAGGAAACTCTAGTGGTGGTTCGTGATCAAATTTTGTAGATTCTCGGGGACAAATTTTGAGCTACAACAAGTAAGTGTTACTCCATTTGTATCGCAATTAATCTAAGCATGTTATTCCTTTAAATTGATTTAATTAGAGTGCTTTGCATCCTAATTTCTTTCGCTACATATTTTCTAACTCCATCAGTACCAAAGTACCTATTGCTGCTATTGGGATGGTAAAACTACCTAGTAATATATTGTCTATGATTCTTCAAGATGTTCTTTATGCTCCCCTCATGTAAAAGAATTTGATTAGTGTCTCTAAGCTAACCCAAGATAATGATGTGCTAGTTGAATTTCATGATGATTTTTGTTTTGTTAAGGCAAAGAAGTCCAAGGAGGTGTGCCTCATAGGGAAGCTTGAGCATGGACTCTACCGTTTGGAAGCAGCCTAA

mRNA sequence

ATGGTAACTCCTTCTTCCTCACAGAAGAATGCTTCAACCAGAAACAATTCCACACCAGCTATTGAACATTATCAGAAGATTGTGCTCCCAATTCCAAGAAGCTACAAATTGGAGGGTCATCTCATGGGTAAGTCACCAGCCCCTAAGCACTCCATTGTTATTCATCAATGTAAAGAAGATCATACTGGACTGGTACTACCAAATCTAGAGTATGATATTTGGCTGGTTGCTGATCAACTGTTAGTTGGGTGGTTGTATAACTCAATGACACCCAAAGTCACTGCTCAAGTTATGGGCTACGATGAGCTAAGCTGCTGTGGGATGCCATCCAAGAGTACTTCAGATAGATCTCCTATGGATTTTAGGAGCTTTATTTCACATGTTTTTGCAGGTCTTGATGAAGAATATAACCCCATTATTTGTGTTATTTGGAGCCAAGATCTCACTTGGAATAAGATTCAATATAAGCTTCTTTCTTATGAACAACGACATGAAAAACTCCAGGAGTTCAAGGGAAGTCTAACTTTAAACCAACCTACTTTGAATTATGCTGCAGTAGACAGAAAAAACAACCATAACAACAACAACAATAATACTAGAGGAGGCAACAACAGAAATAGAGGCAGAAGTATCACAAGGAAGAAAATGAGAATGCAAGCAATTCTTCATCAACAAATCAGAATACTACCAATCCCACTGCTCTTATGGGCTACCCTAACACTCTTCAAGACTTCTCCTAGTACTTGGACAGCGGAGCTACAAATCATGTTACTACCGACCTTCAAAAACTTTTTGAAGGGTAAGTACATTGGCTCAACTTCTATTATGGTTGGAAATGATAATGATGTGCTAGTTGAATTTCATGATGATTTTTGTTTTGTTAAGGCAAAGAAGTCCAAGGAGGTGTGCCTCATAGGGAAGCTTGAGCATGGACTCTACCGTTTGGAAGCAGCCTAA

Coding sequence (CDS)

ATGGTAACTCCTTCTTCCTCACAGAAGAATGCTTCAACCAGAAACAATTCCACACCAGCTATTGAACATTATCAGAAGATTGTGCTCCCAATTCCAAGAAGCTACAAATTGGAGGGTCATCTCATGGGTAAGTCACCAGCCCCTAAGCACTCCATTGTTATTCATCAATGTAAAGAAGATCATACTGGACTGGTACTACCAAATCTAGAGTATGATATTTGGCTGGTTGCTGATCAACTGTTAGTTGGGTGGTTGTATAACTCAATGACACCCAAAGTCACTGCTCAAGTTATGGGCTACGATGAGCTAAGCTGCTGTGGGATGCCATCCAAGAGTACTTCAGATAGATCTCCTATGGATTTTAGGAGCTTTATTTCACATGTTTTTGCAGGTCTTGATGAAGAATATAACCCCATTATTTGTGTTATTTGGAGCCAAGATCTCACTTGGAATAAGATTCAATATAAGCTTCTTTCTTATGAACAACGACATGAAAAACTCCAGGAGTTCAAGGGAAGTCTAACTTTAAACCAACCTACTTTGAATTATGCTGCAGTAGACAGAAAAAACAACCATAACAACAACAACAATAATACTAGAGGAGGCAACAACAGAAATAGAGGCAGAAGTATCACAAGGAAGAAAATGAGAATGCAAGCAATTCTTCATCAACAAATCAGAATACTACCAATCCCACTGCTCTTATGGGCTACCCTAACACTCTTCAAGACTTCTCCTAGTACTTGGACAGCGGAGCTACAAATCATGTTACTACCGACCTTCAAAAACTTTTTGAAGGGTAAGTACATTGGCTCAACTTCTATTATGGTTGGAAATGATAATGATGTGCTAGTTGAATTTCATGATGATTTTTGTTTTGTTAAGGCAAAGAAGTCCAAGGAGGTGTGCCTCATAGGGAAGCTTGAGCATGGACTCTACCGTTTGGAAGCAGCCTAA

Protein sequence

MVTPSSSQKNASTRNNSTPAIEHYQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLVLPNLEYDIWLVADQLLVGWLYNSMTPKVTAQVMGYDELSCCGMPSKSTSDRSPMDFRSFISHVFAGLDEEYNPIICVIWSQDLTWNKIQYKLLSYEQRHEKLQEFKGSLTLNQPTLNYAAVDRKNNHNNNNNNTRGGNNRNRGRSITRKKMRMQAILHQQIRILPIPLLLWATLTLFKTSPSTWTAELQIMLLPTFKNFLKGKYIGSTSIMVGNDNDVLVEFHDDFCFVKAKKSKEVCLIGKLEHGLYRLEAA

Homology

[Close]

BLAST of ClCG02G007470.1 vs. NCBI nr
Match: TXG48382.1 (hypothetical protein EZV62_027676 [Acer yangbiense])

HSP 1 Score: 99.4 bits (246), Expect = 6.0e-17
Identity = 97/339 (28.61%), Postives = 149/339 (43.95%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLVLPNLEYDIWLVADQLLVG 83
           ++ +VLP+ R  ++EG++ G    P    +I   +++    +  N EY+ W+V DQ+L+G
Sbjct: 187 WKNLVLPVIRGNRMEGYITGAKKCPP-EFIITDLEQEADETLEENPEYEDWIVHDQILLG 246

Query: 84  WLYNSMTPKVTAQVMG-----------------------------YDELSCCGM------ 143
           WLYNSM P V ++V+G                             + +L   GM      
Sbjct: 247 WLYNSMEPDVASEVIGSETSKDLWESINTLFGLKTKSNIAYYKREFQKLQKGGMKMSDYL 306

Query: 144 -PSKSTSDR-----SPMDFRSFISHVFAGLDE-EYNPIICVI-WSQDLTWNKIQYKLLSY 203
             +K  +D       P+     +S V  GLD  EYNP++C I   +D++W  +Q KLLSY
Sbjct: 307 KAAKKLADNLALAGRPVPLEDLVSQVLDGLDSVEYNPLVCQINEREDISWIDLQAKLLSY 366

Query: 204 EQRHEKLQEFKGSLTLNQPTLNYAAVDRKNNHNNNNNNTRGG---NNRNRGRSITRKKMR 263
           E+R EK+     S+ L Q + NY  V  KN       N   G    N+N+G S       
Sbjct: 367 EKRLEKINAGFSSINLGQVSANY--VGTKNTGGQTGQNRSQGFLQGNQNKGSS----PFS 426

Query: 264 MQAILHQQIRILPIPLLLWATLTLFKTSPSTWTAELQIMLLPTFKNFLKGKYIGSTSIMV 317
             +++H              TL L             I+ +P  K     K + S S + 
Sbjct: 427 RDSVMHTHNN---------RTLLL-----------KDILHVPDIK-----KNLLSISQLT 486

[Close]

BLAST of ClCG02G007470.1 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 95.9 bits (237), Expect = 6.7e-16
Identity = 77/244 (31.56%), Postives = 111/244 (45.49%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLVLP------NLEYDIWLVA 83
           +Q + LPI RSYKL  +L G  P P   +V      +  G          N  Y+ W+V 
Sbjct: 47  WQNLALPILRSYKLFDYLTGDKPCPPTHLVPTDTPTNIEGSTSSQSSPTLNPTYEAWIVV 106

Query: 84  DQLLVGWLYNSMTPKVTAQVMGYD----------------------------ELSCCGMP 143
           D+LL+GWLYNSM   V  QVMG+                             + +C G  
Sbjct: 107 DKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSL 166

Query: 144 S--------KSTSDR-----SPMDFRSFISHVFAGLDEEYNPIICVIWSQ-DLTWNKIQY 203
                    KS +D      S +  R  +S V  GLDEEYNPI+  +  + +L+W+++  
Sbjct: 167 QMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHA 226

Query: 204 KLLSYEQRHEKLQEFKGSLTLNQ---PTLNYAAVDRKN---NHNNNNNNTRGGNNRNRGR 214
           +LL+YE+R E     K  + +NQ   P++NY  VD ++   N   NN N   G+N +RG 
Sbjct: 227 ELLTYEKRLEYQNSLKSGIPINQTQTPSVNY--VDGRSFQTNQRTNNGNNSHGSNTHRGG 286

[Close]

BLAST of ClCG02G007470.1 vs. NCBI nr
Match: XP_016902203.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 8.2e-14
Identity = 66/206 (32.04%), Postives = 97/206 (47.09%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLV-----------------L 83
           ++ + LPI + YKLEGHL  ++P P H ++       +T +                  +
Sbjct: 43  WKTLALPILKDYKLEGHLTAETPCPSHFVL--SASSSNTTVTEEGADATIGASSSITPRI 102

Query: 84  PNLEYDIWLVADQLLVGWLYNSMTPKVTAQVMGY---DELSCCGMPSKSTSDRSPMDF-R 143
            N  ++ W+  D LL+GWLYNSMTP V  Q+MG+   ++L            R+  DF R
Sbjct: 103 VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLR 162

Query: 144 SFISHVFAGLDEEYNPIICVIWSQ-DLTWNKIQYKLLSYEQR--HEKLQEFKGSLTLNQP 203
             +     GLDE YN +I VI  + D++W  +Q KLL +E+R  H+  Q+         P
Sbjct: 163 QMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSP 222

Query: 204 TLNYAAVDRKNNHNNNNNNTRGGNNR 206
            LN A     N   N +N    G NR
Sbjct: 223 ALNMAQRFALNGQRNQSNKKFYGYNR 246

[Close]

BLAST of ClCG02G007470.1 vs. NCBI nr
Match: XP_016902205.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 8.2e-14
Identity = 66/206 (32.04%), Postives = 97/206 (47.09%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLV-----------------L 83
           ++ + LPI + YKLEGHL  ++P P H ++       +T +                  +
Sbjct: 43  WKTLALPILKDYKLEGHLTAETPCPSHFVL--SASSSNTTVTEEGADATIGASSSITPRI 102

Query: 84  PNLEYDIWLVADQLLVGWLYNSMTPKVTAQVMGY---DELSCCGMPSKSTSDRSPMDF-R 143
            N  ++ W+  D LL+GWLYNSMTP V  Q+MG+   ++L            R+  DF R
Sbjct: 103 VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLR 162

Query: 144 SFISHVFAGLDEEYNPIICVIWSQ-DLTWNKIQYKLLSYEQR--HEKLQEFKGSLTLNQP 203
             +     GLDE YN +I VI  + D++W  +Q KLL +E+R  H+  Q+         P
Sbjct: 163 QMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSP 222

Query: 204 TLNYAAVDRKNNHNNNNNNTRGGNNR 206
            LN A     N   N +N    G NR
Sbjct: 223 ALNMAQRFALNGQRNQSNKKFYGYNR 246

[Close]

BLAST of ClCG02G007470.1 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 8.2e-14
Identity = 66/206 (32.04%), Postives = 97/206 (47.09%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLV-----------------L 83
           ++ + LPI + YKLEGHL  ++P P H ++       +T +                  +
Sbjct: 43  WKTLALPILKDYKLEGHLTAETPCPSHFVL--SASSSNTTVTEEGADATIGASSSITPRI 102

Query: 84  PNLEYDIWLVADQLLVGWLYNSMTPKVTAQVMGY---DELSCCGMPSKSTSDRSPMDF-R 143
            N  ++ W+  D LL+GWLYNSMTP V  Q+MG+   ++L            R+  DF R
Sbjct: 103 VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLR 162

Query: 144 SFISHVFAGLDEEYNPIICVIWSQ-DLTWNKIQYKLLSYEQR--HEKLQEFKGSLTLNQP 203
             +     GLDE YN +I VI  + D++W  +Q KLL +E+R  H+  Q+         P
Sbjct: 163 QMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSP 222

Query: 204 TLNYAAVDRKNNHNNNNNNTRGGNNR 206
            LN A     N   N +N    G NR
Sbjct: 223 ALNMAQRFALNGQRNQSNKKFYGYNR 246

[Close]

BLAST of ClCG02G007470.1 vs. ExPASy TrEMBL
Match: A0A803PM38 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.1e-19
Identity = 107/390 (27.44%), Postives = 165/390 (42.31%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLVLPNLEYDIWLVADQLLVG 83
           ++ +V  I R ++L+G+L G  P P+  +         + +   N  ++ W+V DQLL+G
Sbjct: 60  WRTMVSAIVRGHRLDGYLKGTLPKPQEFLSSTDLDGSVSSVGQVNPAFEQWIVNDQLLLG 119

Query: 84  WLYNSMTPKVTAQVMGYDELSCC--------GMPSKSTSDR------------------- 143
           WLY SMT  +  +VMG D  +          G  SK+  D                    
Sbjct: 120 WLYGSMTEGIACEVMGCDSSASLWTALEELFGAHSKAKMDEYRTKIQTARKGALSMADYL 179

Query: 144 --------------SPMDFRSFISHVFAGLDEEYNPIICVIWSQ-DLTWNKIQYKLLSYE 203
                          P      +S+V +GLD EY P++ +I ++   TW ++Q  LLS +
Sbjct: 180 RQKRQWADVLALAGEPYPENQLVSNVLSGLDIEYLPMVLLIEARGSTTWQQLQDMLLSLD 239

Query: 204 QRHEKLQEFKGSLTLNQPTLNYAAV---------DRKNNHNNNN----NNTRGGNNRNRG 263
            + E+L  F GS  L    +N +A            + NHNNNN    +N RG NNR+RG
Sbjct: 240 SKMERLHSFSGSSKLTGVPMNPSASLANKGPHPGANRGNHNNNNRGGHSNNRGSNNRSRG 299

Query: 264 RS-------------------------------ITRK--KMRMQAILHQQIRI------- 318
           R                                IT +  KM ++   + + ++       
Sbjct: 300 RGGRTSGPRPTCQVCGKYGHSAAHCYNRGASNHITSEINKMNLKEEYNGKEKVTVANGNR 359

[Close]

BLAST of ClCG02G007470.1 vs. ExPASy TrEMBL
Match: A0A5C7GVK1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027676 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-17
Identity = 97/339 (28.61%), Postives = 149/339 (43.95%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLVLPNLEYDIWLVADQLLVG 83
           ++ +VLP+ R  ++EG++ G    P    +I   +++    +  N EY+ W+V DQ+L+G
Sbjct: 187 WKNLVLPVIRGNRMEGYITGAKKCPP-EFIITDLEQEADETLEENPEYEDWIVHDQILLG 246

Query: 84  WLYNSMTPKVTAQVMG-----------------------------YDELSCCGM------ 143
           WLYNSM P V ++V+G                             + +L   GM      
Sbjct: 247 WLYNSMEPDVASEVIGSETSKDLWESINTLFGLKTKSNIAYYKREFQKLQKGGMKMSDYL 306

Query: 144 -PSKSTSDR-----SPMDFRSFISHVFAGLDE-EYNPIICVI-WSQDLTWNKIQYKLLSY 203
             +K  +D       P+     +S V  GLD  EYNP++C I   +D++W  +Q KLLSY
Sbjct: 307 KAAKKLADNLALAGRPVPLEDLVSQVLDGLDSVEYNPLVCQINEREDISWIDLQAKLLSY 366

Query: 204 EQRHEKLQEFKGSLTLNQPTLNYAAVDRKNNHNNNNNNTRGG---NNRNRGRSITRKKMR 263
           E+R EK+     S+ L Q + NY  V  KN       N   G    N+N+G S       
Sbjct: 367 EKRLEKINAGFSSINLGQVSANY--VGTKNTGGQTGQNRSQGFLQGNQNKGSS----PFS 426

Query: 264 MQAILHQQIRILPIPLLLWATLTLFKTSPSTWTAELQIMLLPTFKNFLKGKYIGSTSIMV 317
             +++H              TL L             I+ +P  K     K + S S + 
Sbjct: 427 RDSVMHTHNN---------RTLLL-----------KDILHVPDIK-----KNLLSISQLT 486

[Close]

BLAST of ClCG02G007470.1 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-16
Identity = 77/244 (31.56%), Postives = 111/244 (45.49%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLVLP------NLEYDIWLVA 83
           +Q + LPI RSYKL  +L G  P P   +V      +  G          N  Y+ W+V 
Sbjct: 47  WQNLALPILRSYKLFDYLTGDKPCPPTHLVPTDTPTNIEGSTSSQSSPTLNPTYEAWIVV 106

Query: 84  DQLLVGWLYNSMTPKVTAQVMGYD----------------------------ELSCCGMP 143
           D+LL+GWLYNSM   V  QVMG+                             + +C G  
Sbjct: 107 DKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSL 166

Query: 144 S--------KSTSDR-----SPMDFRSFISHVFAGLDEEYNPIICVIWSQ-DLTWNKIQY 203
                    KS +D      S +  R  +S V  GLDEEYNPI+  +  + +L+W+++  
Sbjct: 167 QMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHA 226

Query: 204 KLLSYEQRHEKLQEFKGSLTLNQ---PTLNYAAVDRKN---NHNNNNNNTRGGNNRNRGR 214
           +LL+YE+R E     K  + +NQ   P++NY  VD ++   N   NN N   G+N +RG 
Sbjct: 227 ELLTYEKRLEYQNSLKSGIPINQTQTPSVNY--VDGRSFQTNQRTNNGNNSHGSNTHRGG 286

[Close]

BLAST of ClCG02G007470.1 vs. ExPASy TrEMBL
Match: A0A1S4E1U9 (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.0e-14
Identity = 66/206 (32.04%), Postives = 97/206 (47.09%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLV-----------------L 83
           ++ + LPI + YKLEGHL  ++P P H ++       +T +                  +
Sbjct: 43  WKTLALPILKDYKLEGHLTAETPCPSHFVL--SASSSNTTVTEEGADATIGASSSITPRI 102

Query: 84  PNLEYDIWLVADQLLVGWLYNSMTPKVTAQVMGY---DELSCCGMPSKSTSDRSPMDF-R 143
            N  ++ W+  D LL+GWLYNSMTP V  Q+MG+   ++L            R+  DF R
Sbjct: 103 VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLR 162

Query: 144 SFISHVFAGLDEEYNPIICVIWSQ-DLTWNKIQYKLLSYEQR--HEKLQEFKGSLTLNQP 203
             +     GLDE YN +I VI  + D++W  +Q KLL +E+R  H+  Q+         P
Sbjct: 163 QMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSP 222

Query: 204 TLNYAAVDRKNNHNNNNNNTRGGNNR 206
            LN A     N   N +N    G NR
Sbjct: 223 ALNMAQRFALNGQRNQSNKKFYGYNR 246

[Close]

BLAST of ClCG02G007470.1 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.0e-14
Identity = 66/206 (32.04%), Postives = 97/206 (47.09%), Query Frame = 0


Query: 24  YQKIVLPIPRSYKLEGHLMGKSPAPKHSIVIHQCKEDHTGLV-----------------L 83
           ++ + LPI + YKLEGHL  ++P P H ++       +T +                  +
Sbjct: 43  WKTLALPILKDYKLEGHLTAETPCPSHFVL--SASSSNTTVTEEGADATIGASSSITPRI 102

Query: 84  PNLEYDIWLVADQLLVGWLYNSMTPKVTAQVMGY---DELSCCGMPSKSTSDRSPMDF-R 143
            N  ++ W+  D LL+GWLYNSMTP V  Q+MG+   ++L            R+  DF R
Sbjct: 103 VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLR 162

Query: 144 SFISHVFAGLDEEYNPIICVIWSQ-DLTWNKIQYKLLSYEQR--HEKLQEFKGSLTLNQP 203
             +     GLDE YN +I VI  + D++W  +Q KLL +E+R  H+  Q+         P
Sbjct: 163 QMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSP 222

Query: 204 TLNYAAVDRKNNHNNNNNNTRGGNNR 206
            LN A     N   N +N    G NR
Sbjct: 223 ALNMAQRFALNGQRNQSNKKFYGYNR 246

The following BLAST results are available for this feature:

BLAST of ClCG02G007470.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG48382.1	6.0e-17	28.61	hypothetical protein EZV62_027676 [Acer yangbiense]	[more]
XP_022151683.1	6.7e-16	31.56	uncharacterized protein LOC111019598 [Momordica charantia]	[more]
XP_016902203.1	8.2e-14	32.04	PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]	[more]
XP_016902205.1	8.2e-14	32.04	PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]	[more]
XP_016902197.1	8.2e-14	32.04	PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]	[more]

BLAST of ClCG02G007470.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G007470.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803PM38	9.1e-19	27.44	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A5C7GVK1	2.9e-17	28.61	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027676 PE=4 SV=1	[more]
A0A6J1DCW4	3.2e-16	31.56	uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A1S4E1U9	4.0e-14	32.04	uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E1U6	4.0e-14	32.04	uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of ClCG02G007470.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..210

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG02G007470	ClCG02G007470	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G007470.1-exon	ClCG02G007470.1-exon-CG_Chr02:8860059..8860133	exon
ClCG02G007470.1-exon	ClCG02G007470.1-exon-CG_Chr02:8860236..8860502	exon
ClCG02G007470.1-exon	ClCG02G007470.1-exon-CG_Chr02:8860625..8860848	exon
ClCG02G007470.1-exon	ClCG02G007470.1-exon-CG_Chr02:8860879..8860940	exon
ClCG02G007470.1-exon	ClCG02G007470.1-exon-CG_Chr02:8861031..8861240	exon
ClCG02G007470.1-exon	ClCG02G007470.1-exon-CG_Chr02:8863201..8863319	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G007470.1-cds	ClCG02G007470.1-cds-CG_Chr02:8860059..8860133	CDS
ClCG02G007470.1-cds	ClCG02G007470.1-cds-CG_Chr02:8860236..8860502	CDS
ClCG02G007470.1-cds	ClCG02G007470.1-cds-CG_Chr02:8860625..8860848	CDS
ClCG02G007470.1-cds	ClCG02G007470.1-cds-CG_Chr02:8860879..8860940	CDS
ClCG02G007470.1-cds	ClCG02G007470.1-cds-CG_Chr02:8861031..8861240	CDS
ClCG02G007470.1-cds	ClCG02G007470.1-cds-CG_Chr02:8863201..8863319	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG02G007470.1	ClCG02G007470.1-protein	polypeptide