ClCG02G006310.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G006310.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	UNC-50 family protein
Location	CG_Chr02: 7116431 .. 7132117 (+)
Sequence length	2702
RNA-Seq Expression	ClCG02G006310.2
Synteny	ClCG02G006310.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAACCCAGCAAAACGCTAACTACTACAATATCCACTGTAGGCTCTCTGCCTGCAGCGCCATCAAAATTGTATTTGATCGTCAATCATGCAGTCGCTACTCTCGCCGGTAGCTCGCAGCGGTCCCTTCCCGGCCGCCGCCGCAGTTTATTCATCGGATTTACATCTCAGCCGCTTCCATCGCCGGCCCTTTTCTTTCTGCCACTCGTCCAATCTCAATTCTCCTCCCAATTCCCTCCCTTCATTTAGTGCCATTCGATCTTCTTCTTCTTCTTCTTCGTTGTTGCTTTTGAAGGCTTTTGGTACTCTGGAGCATAGAAGAGGACAGTTTTGCTCGGAAACACGCGCTTCTTCTAGTCCCATTACCCCGACGGTTTCCCCTAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTTCTCTTTCTTCTTATGCTTTTGTTTCTTGATGTGATGTTTAATTGACCAGGAAATGTAGTGTTGACAATTAGGCTGACCTTGCTTTAATTTCTTAGGGTGAAATTGTGAGAGAATTTTGTGTCCGTTTAATCATAAATGAACCTTTGTGTTTACTAGTTTCGTGAACTTTTCTTTCTCTAATTTGATGGACTCTGGATGGTTTCTAAAATTCCCACCGAAGGTTTTAGCTGTGTGATTATTTAGCTCTTTTCTCTCTCTCTCTCTCTCTTGTGTGGGTCTATCCCTCCCACACGTCCTTGTTCTCCTTGCAGTAAAGCTTCGAATCTCCAATCCAAGTAGGTCAGATTTTTTAGGAGCAGTAACACTATAGATTATATCAAATAATTGTCTTCTGCTATGCTTGGTCCTTTGTGGTGTAGAGTATGCAAGAAGGTTGTGGAGAGTCTGGACCATGTTTTCTGGGATTGTCGGTTTGTTACAGTGATTTGGGATAGATTCCTGCAGTCTTTTGGTATTCAGATGGTTTGCAACAGGCCGTGTAGGGTTATGATGGAAGAGTGTTATTCCTCCCCCTTTTTGTGATAGAGGGGCAAGTTTCTGGTAGACTGTTTCTTTCCGTTCTCATGGGGTACTTGGCTTGAGAGAAATATGGGTCTTTAATGATAAGGAAAGTCCTTGGGAGGGGTTTGGGCTTTGGTTAGGTTCAATACCTCCCTTTCAGCATCCGTCACTGAAGACTTCTGGCTGGCTATGGTAACGCTGAATGGCCCCAATTGAACAAGTGAAAAGTGAAAAGTTTGGTTGGTACCCCGTACCCCTAAGTTGAAGCATATCTTAATAGCTTAAAACTCCCATGACCACAATGATCTCTTGTAGACTCTCCCTGATTTCAAAAGCGATTGTGAAAGTCAACACATTTGGTTATGGAGTGTGTGTGCTGCAAATGGAGAGCCAAAGATCATAGCTTACTAGTAACAGGTCCCTCCATACTAAGCGAGATAGAAATCTATCCACGAGAAGAAAATTGTGGCAATAATTGTTACTTTAGAACTGGCAACCTACTTGCTTAGATGGAGGTTTGTTGCCCACACCGATCATATAAGACTGAAATATTTGATAGAACAAAGGCTAGCGAGTGTGAACCTCACATGTGGTTGACAAAGTTGTTGGGATTGTGATTTCTAAATTCAATACTGGCATGAACTGCCTTTAGAGGTAATTTTAACATCTTTCTCTATCGTGAAACGATCATAGGCATGTAACAGGAAACTTCTACCTAGCCCAAGCACCAGTCAAGCAGTCCATTATGGAAATTAAGCTCTCTCCCGCACACCTTATTATGGAGTCAGATCAATTATGGTTTAAAGGGCATTTGTATGTCGTTGTTCCTAAGGACCCCTTCTCATTTCTTTCCTCCAAAAGTACTGTTGTAGTGTGATTGGGGAACATTCAGGTGTGTTGAAGAAAATCTCCAAAAGTACTATTTTCTGTGGCCACAAGTGATCTGACCGTTATCATGGGATAATTTTGCTATGGACTTCATTGAGAATTGCCAAGTATGAGGGAATGGACTTGGTATGAAAATTATATTTTCTTTTCCTTCTTCTTCTTCTTCTTCTTTATTATTATAATTATTTTTCCTTTTTATATAACCCCAACAACATGTCATGGGGTGGTGGTTTCAAACTTCTGACATCTTGGTTGAGTCTAATTGGCATTTATCAAGGAAAGTATCATGCTCTGTGGTAGACCTTAAGTGGCTCCATAAGCAACTTTTGGAATACAATATTCAAAGTGCAGGATATTGTTTTGAAGCACTAACACACCATGCCATCTTCAAATCGATTGGTAATCAGAAGAAGATAATCAGGGGCTGGAAACAAGGTGCTTTACAAAAAACCACGACATGAGCCACTGTCATGGTCTCAGTATTATTTCAATACCTTGTAGGCTTGTACTATGTTATCTTGAAGGCTAGCTCTTATCAATGTCTATTTGGTTAATGTTGTCTCTTTTCAACTTCTATAAAGGTTGCCTCTTCTTGATAAGAGTGGAAATGATGAAGGAAGAATAGGGTTAATGGGGTAATATTCTAGATTAATTCCAATTTTACCCCCACTTATGATAAACTCTATAAATATGAGTTTTCCCCTATTGTATGAGATACATTATCATTCTAATAACAGATTAGCAAACTTGATTCTTGGAGGATCATTCCTCGAGGCTACTTAGGCTACATTAGGAAAGTTGTCTGTGCATTTAACATATTCTAGGGCAAATTAGCTTTAGTCTAAGTAGTGAAAGTGGAGTGATTTTGTACAAGAGAAGAGAAATTACTTCTTTTTCCCTTGAGAGCTAAACGATGTCATTAATGAATGAAATGGAGAGAAATAACTCTCAAAAACTTAAAGAGGTGTGTTGCAATAAAGCTTTCTAATTGGAAATTAAAGTAGTAAGACTGTAATCATAAAAAAGGCATATACTACTGCACCAATATAGAGCATGAAGTACAATTAAATCCAAAAAGCTATCAAAAACTGAGGAAGAGTCCCTGGAAAATTTCCCATTTCGTTCAGACCTAAGGGTCCAGAAAAATCTGTTGAAAGCCAGCCACAATGTTTTCTTCACACCATGGAAAGGATGGCCCACAAAGATGGAAGCAAGAACATCATATATGTTACCAGGCATAGACAATGAGAATGAACACCAAAGGGCTCCAACATTATGGACCAATAACAGAAGCAAATGAGCAGTGGGGCAAGAAGATGGCACAGACGTTCATCACTAGAAAGGCACATCACACACCATGAAGATGAGAGGCAAATATAAGGGATTCTCCTTTGAAGGCGATCAACGATGTTGATACTCTCATGATGAAGTTCCCACAGAAAAATATTAATTTTTTTTTGGATAAGCGTCCTCTCAAATCACCGAATAAAGGTTGTGAGGAGATGAGTTCTTCGCATGTGTTAAATCCTCCATCAATGATTGCACTGTAGAGGCCAAAACCAAGAATCATCAAAATTCCTTGGACTAACTAAGGAGGGAAAATGAGAGAGACTAGCCTATTCAGCAGTTTCATTCTCATTAAGGTTTCAACAAAGACCCAAATTCCAAGCATGATGTTTGGCATTCCATACTTGTTCAACATAATCATTTGACCTAGTAGATAGTTGAAACAATCTTAGATAGGCTATAGCAAGGATTTGACAACTCAACCAATAATCATGCCAAAAGGATGCATGAAGACCATTGCTGACAGTCCTTTGAATACGATGTGCAATCTAATATAATGCCAAGAGAAGAAAAATTACTTGAGCAGAGCAGGTGAGAAAGTGATGGAAGTGTGAGTATGCAAATGTGTAAACGTGAGCTCCAAAGGAAGTCCCAAATTGGACCTCACCTCCCTCAGTTTTCTGCCTTTGTTTGAAGCATGAGGAAAACGGTAGGTTCTGCAAAGATGACCAGTTGTTCATTTGTTTGAATGTTTGACATGTAGCTTTCTCAAAGGGGAATCAAGGATCTGTGGAACTGTGCTATTAGAGCCTTTCTCTAGCTCCTATGGAAAGAAGAAAACCAGAGATTGTTTGAAGACAAGTTGAAGGTTTTGTTGGTTGCTTTTTTAGGGAATATACAGTATATGCTTTCATGGTGATGCTCAAATCATAAAAATTATTTTGCAGTTAAGTCTCATTTTGATTTTGCTTGAAGGCTTTACATTTGCTCTTTTGGGAGGGGGTTCTCTCTATCCCCACCCTTAAGTTGTGCCTTAATCAAATGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGAGATAGTAAATGTGAGCTCACAGTTTATAGTAGACAGGAAAAGCAGTACTCAGGTGGCTTAGGTAGTGAGCATAACTAGTTATGTAAAAAAAAAAAATATATATATATATATATAAAGAAAAAAAGAAGAAAAAGAAAAAGCAAGACCTTGACAAATGGGAGTACATTCTGGAAAACAGTTAGAGAGGACATGAAGACTTATCATCACATTTTAAATCAAATTCCTTCGTCACATATGTGTATATTATGAAATGGGAGGCCATGGTGGGATCTTATGATGCTTGAATTATTTCTGAAACTGTCCCACTGCATAACCTCTTCAATATTGGAAATGGACAGGTTATTTAGGTCATTAAAATTCTTCTTTATTATGATCAAAGTAGACTGGAAGAGACTAAATTGGACAAAGTTATAAGTTTGTTTAAACTTTAATCTCTATTCTTTGCAACTCTTATAAACCATCTGATCGTGTCATCTAGGCTAATATTGTATCTTCCATGTTGCTTAGTTAGTCTACCTTGCTTCTGACTGTTACCTTGCTAATACTGTTAGTTGCTTGTTTAGTGGCGTAGTTTGTTTGTGGTTTGTTAGTAGTTTACTGTGTAATTGTTTGTTGGTTAGCAGCATATATAGTTAAGTGCTATGCCTTTGTAGTCACTTCTTTTGAATTGAATGATGATTTCTTGTGATTTCTTTCAAGAGGTTTCTAGACTACTGCATTGCAATCATTATGGCTAATCATTTAATGAACCAAGTTGCTTTTGTGGTCTAGGTGGCAAAGAGATTAGAGAAGACATCGAAGTATTTCAAGAGGTTAGGTAGTCTTGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCCGTTATTCTTTCATTCTCTGTTGTCATTACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCCTTCATTTCCGTATTCTGGTCCTTTGGTTACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGTATTTTGATTGCAGAGTCTCTCTGTGTTAATTGATTTCTCGTGATTACTGTTAAGGCTTTAGTGTGCAAGAAGCCATTTCATTGTTCCCTCAGTCTTCTAAACCGCAAAACCATGTTCATTAATCCAATTTAATCTGGTTATAAACAGGATTTCTTTGCTATAATAAAGAGATCTAATTATTTGCTGTGACATCTATCTATTTGAAAAATGAAACAAGATAACCTGTACATTACAACTTGGATAATTTTGTCTTTACTCTAGCAAAGATTTCAAAAGGCTTTATCAACTTTCTTACCATTTTTCTATCCCAACATACGAACAATTGGGATCCCATATTGGAAAAATTATGGAACCTCACAATCTTTATAAGATGGCATGGACTGCTTTTCTCATTGCCAATTGGTTTTGGGATGGGATTTCATGTTATCTTATATGGTATTAGAGCCCATGAAGCCCAAACGGGCATTCAGTCCAAAAATAAAAATTGGAATCTGACCCAAGAATAGTGAACCCACAACATCTTGAGGGGACGTAGTGAGAATCTCACATTAGAAAAATCAGGAGACCTTACTGTCTTTATAAGATGATATAGTGTACTTCTCTCATTGCCAATTAGTTTTGAGCATATGATCTATTAAGGTTATCATTTTTTTAAAATTTTTTGTTTTACTTGAGAAATGTAACATGGTCATACATCCAGCTTGTGGCATCCTTCTTTCTTTCCTCCATTTATTTTTGCATTATTTGTTTATAACTGGAGTAGCTAGTTTGACATAATTTTAGCTGCTAAATATGAGCATGTGTAAAATAAATTAGCAATTTGACAGAACTCATGCTTCCTCTTCTTATTTATTGATCCCAATTTCAGGCTCCTCCCCGAGCTGATGTTGTGAATAGCTTAAGAAATGGGATAGTAGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAGGCAACGGTGGGATTGTTAGTTGCCAAGGCTCTTACTTCTTCAGCAGTTCCATATTACCAGGCAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGGTACGTTTTCTCTTCCCTCGATTGGTATTTTGCTAAAGAACATAAAAGATTTTCAGATTTTGGATTCAGCGGAACGGTGCATGTACATGCCATAAAAGTTAAGGTGAACAATTGGTTGATCTGGCATGCTTAAAAAGGTCTGGTTAAACGTCATTGTGAATTGGCAATTCATTACGACCTTTACCAGTGGTATATAGTGGTTTTAAAAATGGCAATAGTGAATGCTATGTATGCTTTATTGATTGCTAGAGCATATGATTCTGCTTCTCCTATAACTAATGGCAGTCATGACAGTATAAAGGAATATATGTTCTTTTGAAAAGAACCAAAAGAGCCTTGTGCTGGAAAGCTAAACTTGCATAAGTAAGACTCTAGTTAGGGAAATATTAGGATGATTAGTATAGTTAACTAGAAGGGGCATATTAGTAATTAGTTAGTAAGTTTGTTGGGGCTTTTAGTTATAAATTGAGGGAGTGGGTTGGGAACAATGTGTGAAGTATTTGGTAGTAATTTCCGTTAGGAGGTATTCTGACAATATTTCAAAATGTACATTAATTCTTGATGAGATAGCCTTGTGCCATTTATTGATTTTTTTTATAAAAAAATTCCTACTTCGCAGGCTTCTGCAAATACTATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTACCTGCTACAGAGAGTATTCCTATTCCCCGAATAGCATAACCTCCACCGTCACCCTTTCTAGTCAGTTTAATCCAGCAGCAGAGTCGACATCAGAGGCGACATGATACGAATTGATCGTGAGTTTAATGTCCAAGACATTTGTATTTTTGTCTCACCCATCCGAACGGGGTATTCTCTTCTTCTGGTGTGGGTGGAAATCAAAAGCCTCTCTTGGTGTGGGTCCTTGAAGGTGTTTCCTTGTGGGTAGCTTTAATGGAAGTTTCTTGTATTGTATTAGAAGACTGGGCAGGCCATGTCAAACTCTTCTATTTAAAGTGTAGATTGAAATATGGTTCTGTCTGATTTTTAAATCTCTCAATTCATTTTAATATGTACTTATTTTTTTTTTTTTTTTTTTTTTTTTTGTTTCACTCTTTTCACTTTAATTTTCTTTTGTGTTACATATGAACACAGGTGATTTTGAAGCCTGATCCTGGAAATTCACAAGACCTTTTCATCCAAAGTCTCTCTGCTTTAGGTAGGACATAATGATCCGCTATGATGAACTTCGATTGATTTAGCAAACATATATGCTCANTTTTTTTTTTTTTTTTTTTTTTTATTTTATGGAAAGTATTTACATGGTTGAAACTTTGGTAATGGTTGTTGGTTTATGAAATTTTTGAGCTCTTGTCTGTTTGATTGTTTAGTCTGTGATTTCGATTTTTATTTAAAATTGTATTTGTTTTCTTATAATATTTATGGATGTTTTAAAAAAAAAAAAATTATTAAAAATAATTACAAATATAGCAAAATTTTATTTTTTATCTGTGATAGATCGCGATAGACTCCAGATAATCTGTTTATCTAGGTCTATCGTTATATCACAGATATAAGTATACATGATCTCACTACCCATATAAAGCGTACATCTCTACACAGGGGTAGGTCAAAACCTTTTTTTAGAAAAGTGAAAAGTTGGAATTCGATAAAACAAGACCCCTAAAAGTGTCTTGTAAATAAATTATTCGAAATTTTGTTATATTTATAAATAATTTGGTTCATTTTCTTATTTTTGAAATAACCCTTAATTTTAATTATTTTTTATAAAAAAGTTTAGAATTGTTTTCAAATTCAACAAAATGGATCAATTTATTTATAAATAAAGTTAAATGTAATTATCTATCATTATAGACAAGGACATTTTATTATATTAAAAAATATTTCTAGTAATTTTATCATCTAAAATAATTACTAAAAAATTTAATTAATTAGATAAAGAATAATGTAGTACTAAAAAAAAAAAAGATAATCATGTCGTAACTCTAATAAGAGTGCTGATAAACTTGGGCAAAATCATTTTTAACATTTGGAGAGAGTGGAGAGAGAGAGAGATCATTTCCACCTTCCTCGCCCATTTTCTGAAACTCGTCGACGGAGAAGAGAAGAGAAGAGAAGAGATAGTCTGTTCGGAGAATTCTCAGATCTCAGAGCAAAGAAGCGGCTACAACAATTCAACTGTCGCCGGAGATAGAAGGACGCGCAATTTGAAGCAAACGGAGATGTTGCCCACAGCTTCCAGAGGGCGCTCCTCGTCCTCTTCATCTCGAGCTAATCCCATGTATCTACAGTACCTCCGTCGAATTGTCAAGGTTCTTTCACTTCCCAGATTATGTCTCTTTTCCATCTCTAGCAGATCCGTTCCATATCTTAATCAAACTGCTACTTTTCAATTTATTAACGATTCATCTTCACGAATATGGCTGATGAAGACTGTATGCGATTATTTGACTTGGTGTTATCGTTGTTTGAGGAATTTTTATGACTTCATCATTTTTCTCAGTGTAAACATTGGAGCAGTGTTGTTATTAGTTCGTTCTGAAATTTTGTTCCTATTTTGTATTTTAGTCGCGATTCTTTTTACCTGGTTGGTTTTGGTTAGATCATTTGTTGTTCCGTTATTCGTGATCTACTTTACGCTGTTCAATTACTGTTTGATCCTTTGATGTTTTGGGCGTGGTGCCACGTGGAGTCTTGGATCTTGTGAATTCAAGCAGTAATAGTTGGGTAGTTCAGAGCTTGGTCGTGTTTGAAGAGAACAAGTTTCAGTTCACTTGACTTGTAATATAATTTATTGCTTCCTCAACATGCTTTGGCTAGTTCTGTTCTTTACAGTTCTTGAAATTTTATCATATTCTTGGTTACAAAATAAATTGTCTGAAATTGGCCTTAAAAGGAAACTAATTTTCTTTCAATTGTCTTATCTGATGTAGCTTGAATCTAACAAATTATAACTTTATCTGGCTGCTTGCAGTGGCAACAAATGGACATCGAATATACATTCTGGCAAATGCTTCATCTATGCACTTCACCAAAAGTTGTGTAAGTAATTGATTCTTATTTGCCTATTGACACTCACTAGGAGCTGAAGCAAACTTTATTTCAAGTTTAATTTTAGCCTTTTCCTAATCGTTGGTCTTTGGATTCTTGTTGGGTTTTTGCTATGGACGCAGCTATCAGCATACCAAGTATCACAAACGTAAGTGCATAACATCCCACATTCAGATCAAAGAGTTCTTTTTTGTTTTCTTTTGATTGTAATGGTGCTAAAGAATCTGTTATTGTACTCGTGTGATTTACGCTTATTTATGTGTAATCCAGTTGATAAGTTGTTTAGATCTTTTCCAATATACAGTATGCCCTTTAACTATGTGGTGAATTCCTCTCATAGATAATCACTACCAACCTAACATGCTACTAGGTGGAGGTAGTGAATATTTATTTAAATTCAAAACAAAATATTTTCTTAAAAAAAATGCTGGGTTTTAGACTCAGGTTGATACATAAGGAAAGCTTATTGCTATAGTCTAAATTCTTACATAAGATATTGGTGAAATAGGTGATTAAGCTTTGTGCATAAGAGATTGAAGTGTAAAGTGATAGCCGATCGAGATGGATCTTTTATGTCGAAGATCTTATTCCGAGTTCTTATTTTTTTGTAGGCCTTTCTTTTCCTCTTCTTGTTGGGAATTTCTCACATCCTCTTTCTGTTTCATTAGGGTTTCCAATTGGTGTAAGCTAGATACTTCTTTTTGGAGGGGATTTTTGTAACCCACATTACCCTTGGAGGTTTTCCTCCCTTTTGTATATTTCATTGCATTAATGAAAATTTTCCATTTCCAAAAGAAAAAAAAAAATAATAATAAAAAGAAATATTTTTAACAGTCGATGAAATATGTATAGTATAAAGGCTTTCCATTCATTAAAACTCAAATGAAAAGTTCTTTGCTTTTTTCTTGTGTCAGAAACTAAGAATCAGTGGGCACGTGACGATCCTGCTTTTGTTGTGATCTGCAGTCTTCTTTTGGCAGTTGCGACTCTGGCTTACTGTGCTGCGTAAGTATAGCAAATGCTTCTATGCAGTATCACTTTCTTGGTTTATTTTATTATGAAGGACACATCCATTATGGTAGGTCGTTCCCAAAATATTTGTGTGTGTGTGAGAGAGAGCAAAAATCTCGAGAAGGTATTTCAGCCTCTCCCTCTCTCTCACCAAGAAGAAATAGGCATGCACTCATACAATTACTGAAACAAGAGGTAAACTGAAAGAAATATGTATACCTGTATGCTTCATGTGATAATGGATATCTTTTGTCTTGATGGGTACAATTGGACCTTTTTTTCCCCATATATACTTTTTTATATGAAGTTCTGTTAAGAAATTAAGCTGACTTATGCCTTAGTTGTGTTTTCTGATCGTCATATTTTGTTAATAATTTCAGATATGATCATAGTGCTGCACATGCCTCTTTTGTAGTTGTGTCTGTACTGCTCTTCCACTTGCTAATAACTGGGGCGATTTTGGCAACTTGTTGTTGGTAAGTTATTGCCCTGTTCTATGTGCATGTTACTGCATGATTTTACCAACAATTTTGTTTTCTATCTACACAAGAAATATTCATCATTTGCTATCATTTCAAATGCTTACGTCCTACATATTTTGCCTGATAGTTTGTTCTATTGTCTGTCCTGATTTGCTCTTGGACTTGAACTGTCCTTATAAGATGTGCCTTTTCTAATGCTCCCCTGACTTCAATTTCAGATATTTGTTTCTGCACTCAGTGAAATTGGCTTATGGACATTAGTTATATAAAGGGTGATCAGTTAGTTTGACTACGTGATAAAATCATTCTCAGAAGGATTTATCTCTTTTATGTATTTTGGTGGATCGCATCTCCTAGCCAATGGTCAACTGCACTTAGGATATGAGCCACCCTAATTTGATGTAGTATAGGAAATCTATTACTTTGTTATTGTATGTTGGGCATGAGTTTGAATAATTATGCATTCTTTTAGGGTGTTTGCTATTTTATGGGGGCTTTGGAGTGAAAGAAAGAACATAATCTTAAAGGTGTGAGAGTTCTAATAATATTTGGTCCCTCGTTAGATTCTCTGTTTCTCTCCAGGCTGGGGTTTCTTAGCTATTTTGTAATCATTCGTTAGGTCTTATTTCTCTTGACTTGAGCATGTTCTTGTAGTTTGGGTTCTTTTTGTGGACCATTTTGGCATGTGTATTCTCTCATCTTTTCTTAATAAAAATAAAGTTTTCTCTCAAAAACAAAAATAATAATTGAAAAACTTATGCATTTTTTTATCAGCTAAAGAGATATTGTGGCTTAGAATAGGGAATCTAGCTGTTTCCCTTTTCCTTGTTGAGGTCCTCTGTACTCTGAAACAATTTCAGTGTAGATATCCATGTTGAATTATGTTGAAGTTGGTCTTAACCTTTAACAACCTGTCAATGCTGAATTATTATCGCAGTTGACCACTTGAGCAGTTGTACGAAGTTCACACATTTCCAATCTTTATTGTTCAAATAGTTTTTCAGGATGCTGATATAACTCCTTATTCCGAAAAAAAGTATGCTGCTGTAATTTATAGTGAACAATTACATTACATGAACGTATCTTCAGGTTACTAACAAATGCTTACCTTCGAGAAGAGACACCAGGCAGTCATGTAGTTGAGCAACGGGTTGAATGGCAAGATCTACAACTCTCACTTTTAGCTTTATCCAAGATTGTTTATAACTTCAATTAAACTTCTGTTGAGCAATGAGCATCAGTTTTTAGACCAAACTACTCTTTTGCAATTTTTAGCCTGTTTGATAACCATTTGGTTTTTGGGTTTCGGTTCTTTAAAATTGAGCTTATAAAAACTGCTTCCACCCATGAGTTTTTATGTTTTGTTATAGACTCATGTTTTAAAAAGTCAAGCCAACTTTTGAAAACTTAAAAAAGTAGATTTCAAAAACTTTTCTTTGTTTTTAGAATTTGACTAGGAATTCAAGTATTTTCTAGATAGGTGAAAACTAATAGAAAAATTGGGAGGAAACAAGTATAAATTTCAAAAACAAAAAATAAAAAAATGAATTCATTATCGAACAAGGCCTTAATTTTGCATTGTTAGTGGCCTTTCAGGTTTTAGTAGTATTCTATTATATTTACGCAATGTCTTCCCTTCGAGCCCTCTAAATTAGTGGATTGATTTATGGTTTATTTATTTATTTATTTTTCACTGGTTCTAGGCTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCGATGTTTGTTTTGCTGTACGGTAAGTATGATAAGGGCTTCTGTTTGTGTTTTGTTTTCCAGCATCTATGATACTAGTCTGAAGTCTTGGTTTCGTTGCAGTGATCCATTACTTTATATCACCGCTTCTGGTGGCCCATGGCTTCATTCCATTATTGCTATCAAATTTGCTTTTCATGATTGGGGCTTCGTATTACCATTATGTCAACTTTTTAGGTTATGACGGTAAGCTATATTTTCTTTCATGTTCCTATCTGGTCTATAATTTTTGTGTTGATTGCATAAATAACCTAAGGTATACTGAACCAGAGAGGACAAAGCCTTTTTCTATCCACGGCTTGAACTTTTGGTTCTTTAGAAATCTTAGGTGGGTGCTATTTAGGAAGTTGTGTTTGGATTTTAACCTAAAGGTTGTTGTATGGTATCTACCATATTGACGTGAGATCAAGTGTAGTTTAGGATGGCTTCTGAGGATTTTTCTTTTCAAAATCATGATAAGACTTTTTTATGTAATTACTCTTACGAGAAGCATTAGTTAAGTGATTGTGCCTTCCCGAAGAGTAAAGTAAACACTACTCATTTGGAAAGGAACTTTGAATTAGTTAAAAGTACTTTCCACCAAAGAAATTGGGTCTTTAATCTAACGAGTTAAGGGCGTGTTGAAGTGTGGGGGCGGAGGGAGGGGGTAGTGAGGTGGAGTTGGTGAAATTAAGGCAGATTTTAATTAAGAAAATAATAATAATAAGATAAAGAAAAGACGGACTTTAATTTGATGGATGGCCTGTGAATGAGATGAAATAGGTGTTGGTTAAAACTTAAAAAGCGTTTGGCGTTCGTGGAGGTTAGACGAAGTGCATGTTCCCAACTCTTCTTATGTTTGAAAGTCTTCTTCAAATTATATCATTTATATTTTGCAAATTAATCAGTGTTGGTATGAGACAACCTAATGATGTTAGATATTACTGGAGGGAGGACTGATCATTGACACATCAGTGAAGGAAATGAATATAACTAAGGCCTTGTTTGATAACCATTTGATCTTTTTATATTTTCTCACCTACAAATTTCTAGGTTTTGCTATCCACTTTCGATAAATGTTTTTAAAAACCATGCCAAGTTTTGATAATTAAAAAAAAATAGTTCTTGTTTTAAAATTTAACTAGGAATTTAAGTATTTCTTTAACAAAAGTGAAATCAATTTAAAAAATGGGAAGAAACAAACATAAATTTTAAAAACAGACAACTAATTATCAATTGTATCTTATAAAAAACAAAAAAAGAATCAAGTGGGCCTAAGTTCCTGTGTTCTAATCAAATAATCCATAACTAAGACCATTGCTATATTTGAGTTTGTCTTCCTAGTTTCCCATTAGCTAAAATTGCATCCATGAAATTATTGGCTTGACCGTGTGCCCTAATGCAGTACTGCCATTTTTGGAGAAAACTACTTTCTTCCTCTATCCAATTGGTGTGGTCTTTGTCCTTACTCCAATCTGTAAGTCATAATGAAACCTAGAACTCTCCTTTTCAAAGCTCTTCTACTGAAAGTAAATTTCATTTTCCCTTTTTTTGCCTGCAGTTATCTTGATCGGCTTCAACCCTTCAAGATATTTCATGAACATGTACTTTAGTCAGAACTTATAATCTCGACTTAAGGCTTCGGCTACAGCTTGAGGCAGGATGATTGATAGAACAAAAGATTTCATCGACACAGGTCACCAATGACTGCATTTTATTTTTCACTTGCATCTTGAAAGAAATGAGGAAGTCCAGGTCGTTGGAGCCTCAGCTGCTAATTTTTCAGGCCTTCGAGCGATATCAGGAATTGTAGGGTAGGATCTTGGTATCTTGTGCATCACTGCTGCAATTGAGGTGTGATGCGGCTGAATTTTTGATGAAAATAGATGTGTTGAATGTAATGATTTTTTACCTTTATACAATTTGTTTTTGCAGTTTACACATATACACTTCAAAAGAAATTTAATTCCATCAGGCTTTCTGAATATGTAGAGACCATTTATTTGGCTCGCTTAACACTGCTTTCCAGATTCCGTTTCCCATCTTTGTTCAATGCTGGAAAGAAGTATTTCTTATGAAGTGCAAATGACACAGGAAAATGTGGAGGTAATGGTATGATTCACCTAAATTTTGGTCCCACTTTTTTTATACTTTTTTTTTTTTCTTTTTTTTCTTTTTTTTTTTTATTTTTATTTTTAATTTTGATTTTTTTGCTTGTCATTATTAGCCGATGTTATATAAATGATCTTATTGTGCACTCATGCTCTTGCTTTTACTCTTGTTATGATTCATCCTCACTTTCAATCTTTACTTTTGACTCTCTTAACTCTTGTTTCTTCTTCTCGACACTCTTGCTTCACTTTTAGTCCTTACTCTTGACACTTCCTACTCTTGCTATTCACTCTCTTTTTATAAAAAATTTGAGAGCAAAAAGTATAGAGTAGAGTGAGAACGATAACAAGTAGCAAGAAAATATGAAGACGGCAGGAAAACTCACACTCTAAGGAGTGAGAGGAGTGAGTAAGATCTCAACTTCTATGCACAATATTTTATTTTGGTAATTTCACGTTGATATGAGTAAGCGTGAGATCAAAAAAAAATATTGTTTTCGAAAATAGGTCATCTGGTTAAATGACCCATAAATGTGTGACAAACCGGCCCCAACCAGACTTTTCATTGCAAT

mRNA sequence

CCAAAACCCAGCAAAACGCTAACTACTACAATATCCACTGTAGGCTCTCTGCCTGCAGCGCCATCAAAATTGTATTTGATCGTCAATCATGCAGTCGCTACTCTCGCCGGTAGCTCGCAGCGGTCCCTTCCCGGCCGCCGCCGCAGTTTATTCATCGGATTTACATCTCAGCCGCTTCCATCGCCGGCCCTTTTCTTTCTGCCACTCGTCCAATCTCAATTCTCCTCCCAATTCCCTCCCTTCATTTAGTGCCATTCGATCTTCTTCTTCTTCTTCTTCGTTGTTGCTTTTGAAGGCTTTTGGTACTCTGGAGCATAGAAGAGGACAGTTTTGCTCGGAAACACGCGCTTCTTCTAGTCCCATTACCCCGACGGTTTCCCCTAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAGAGATTAGAGAAGACATCGAAGTATTTCAAGAGGTTAGGTAGTCTTGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCCGTTATTCTTTCATTCTCTGTTGTCATTACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCCTTCATTTCCGTATTCTGGTCCTTTGGTTACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCCCGAGCTGATGTTGTGAATAGCTTAAGAAATGGGATAGTAGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAGGCAACGGTGGGATTGTTAGTTGCCAAGGCTCTTACTTCTTCAGCAGTTCCATATTACCAGGCAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGATCTCAGAGCAAAGAAGCGGCTACAACAATTCAACTGTCGCCGGAGATAGAAGGACGCGCAATTTGAAGCAAACGGAGATGTTGCCCACAGCTTCCAGAGGGCGCTCCTCGTCCTCTTCATCTCGAGCTAATCCCATGTATCTACAGTACCTCCGTCGAATTGTCAAGTGGCAACAAATGGACATCGAATATACATTCTGGCAAATGCTTCATCTATGCACTTCACCAAAAGTTGTCTATCAGCATACCAAGTATCACAAACAAACTAAGAATCAGTGGGCACGTGACGATCCTGCTTTTGTTGTGATCTGCAGTCTTCTTTTGGCAGTTGCGACTCTGGCTTACTGTGCTGCATATGATCATAGTGCTGCACATGCCTCTTTTGTAGTTGTGTCTGTACTGCTCTTCCACTTGCTAATAACTGGGGCGATTTTGGCAACTTGTTGTTGGCTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCGATGTTTGTTTTGCTGTACGTGATCCATTACTTTATATCACCGCTTCTGGTGGCCCATGGCTTCATTCCATTATTGCTATCAAATTTGCTTTTCATGATTGGGGCTTCGTATTACCATTATGTCAACTTTTTAGGTTATGACGTACTGCCATTTTTGGAGAAAACTACTTTCTTCCTCTATCCAATTGGTGTGGTCTTTGTCCTTACTCCAATCTTTATCTTGATCGGCTTCAACCCTTCAAGATATTTCATGAACATGTACTTTAGTCAGAACTTATAATCTCGACTTAAGGCTTCGGCTACAGCTTGAGGCAGGATGATTGATAGAACAAAAGATTTCATCGACACAGGTCACCAATGACTGCATTTTATTTTTCACTTGCATCTTGAAAGAAATGAGGAAGTCCAGGTCGTTGGAGCCTCAGCTGCTAATTTTTCAGGCCTTCGAGCGATATCAGGAATTGTAGGGTAGGATCTTGGTATCTTGTGCATCACTGCTGCAATTGAGGTGTGATGCGGCTGAATTTTTGATGAAAATAGATGTGTTGAATGTAATGATTTTTTACCTTTATACAATTTGTTTTTGCAGTTTACACATATACACTTCAAAAGAAATTTAATTCCATCAGGCTTTCTGAATATGTAGAGACCATTTATTTGGCTCGCTTAACACTGCTTTCCAGATTCCGTTTCCCATCTTTGTTCAATGCTGGAAAGAAGTATTTCTTATGAAGTGCAAATGACACAGGAAAATGTGGAGGTAATGGTATGATTCACCTAAATTTTGGTCCCACTTTTTTTATACTTTTTTTTTTTTCTTTTTTTTCTTTTTTTTTTTTATTTTTATTTTTAATTTTGATTTTTTTGCTTGTCATTATTAGCCGATGTTATATAAATGATCTTATTGTGCACTCATGCTCTTGCTTTTACTCTTGTTATGATTCATCCTCACTTTCAATCTTTACTTTTGACTCTCTTAACTCTTGTTTCTTCTTCTCGACACTCTTGCTTCACTTTTAGTCCTTACTCTTGACACTTCCTACTCTTGCTATTCACTCTCTTTTTATAAAAAATTTGAGAGCAAAAAGTATAGAGTAGAGTGAGAACGATAACAAGTAGCAAGAAAATATGAAGACGGCAGGAAAACTCACACTCTAAGGAGTGAGAGGAGTGAGTAAGATCTCAACTTCTATGCACAATATTTTATTTTGGTAATTTCACGTTGATATGAGTAAGCGTGAGATCAAAAAAAAATATTGTTTTCGAAAATAGGTCATCTGGTTAAATGACCCATAAATGTGTGACAAACCGGCCCCAACCAGACTTTTCATTGCAAT

Coding sequence (CDS)

ATGCAGTCGCTACTCTCGCCGGTAGCTCGCAGCGGTCCCTTCCCGGCCGCCGCCGCAGTTTATTCATCGGATTTACATCTCAGCCGCTTCCATCGCCGGCCCTTTTCTTTCTGCCACTCGTCCAATCTCAATTCTCCTCCCAATTCCCTCCCTTCATTTAGTGCCATTCGATCTTCTTCTTCTTCTTCTTCGTTGTTGCTTTTGAAGGCTTTTGGTACTCTGGAGCATAGAAGAGGACAGTTTTGCTCGGAAACACGCGCTTCTTCTAGTCCCATTACCCCGACGGTTTCCCCTAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAGAGATTAGAGAAGACATCGAAGTATTTCAAGAGGTTAGGTAGTCTTGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCCGTTATTCTTTCATTCTCTGTTGTCATTACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCCTTCATTTCCGTATTCTGGTCCTTTGGTTACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCCCGAGCTGATGTTGTGAATAGCTTAAGAAATGGGATAGTAGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAGGCAACGGTGGGATTGTTAGTTGCCAAGGCTCTTACTTCTTCAGCAGTTCCATATTACCAGGCAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGATCTCAGAGCAAAGAAGCGGCTACAACAATTCAACTGTCGCCGGAGATAGAAGGACGCGCAATTTGAAGCAAACGGAGATGTTGCCCACAGCTTCCAGAGGGCGCTCCTCGTCCTCTTCATCTCGAGCTAATCCCATGTATCTACAGTACCTCCGTCGAATTGTCAAGTGGCAACAAATGGACATCGAATATACATTCTGGCAAATGCTTCATCTATGCACTTCACCAAAAGTTGTCTATCAGCATACCAAGTATCACAAACAAACTAAGAATCAGTGGGCACGTGACGATCCTGCTTTTGTTGTGATCTGCAGTCTTCTTTTGGCAGTTGCGACTCTGGCTTACTGTGCTGCATATGATCATAGTGCTGCACATGCCTCTTTTGTAGTTGTGTCTGTACTGCTCTTCCACTTGCTAATAACTGGGGCGATTTTGGCAACTTGTTGTTGGCTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCGATGTTTGTTTTGCTGTACGTGATCCATTACTTTATATCACCGCTTCTGGTGGCCCATGGCTTCATTCCATTATTGCTATCAAATTTGCTTTTCATGATTGGGGCTTCGTATTACCATTATGTCAACTTTTTAGGTTATGACGTACTGCCATTTTTGGAGAAAACTACTTTCTTCCTCTATCCAATTGGTGTGGTCTTTGTCCTTACTCCAATCTTTATCTTGATCGGCTTCAACCCTTCAAGATATTTCATGAACATGTACTTTAGTCAGAACTTATAA

Protein sequence

MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSFCHSSNLNSPPNSLPSFSAIRSSSSSSSLLLLKAFGTLEHRRGQFCSETRASSSPITPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAVPYYQAASPGNSPVLALDVFLVQISEQRSGYNNSTVAGDRRTRNLKQTEMLPTASRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILATCCWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHGFIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMNMYFSQNL

Homology

[Close]

BLAST of ClCG02G006310.2 vs. NCBI nr
Match: KAG2277965.1 (hypothetical protein Bca52824_060520 [Brassica carinata])

HSP 1 Score: 571.2 bits (1471), Expect = 8.8e-159
Identity = 335/545 (61.47%), Postives = 370/545 (67.89%), Query Frame = 0


Query: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSFCHSSN-LNSPPNSL--PSFSAIR 60
           M SL  P A S    A A      L     HR P     S N L   PN L  P      
Sbjct: 1   MPSLHMPTASSSGVSAVA------LRPGFHHRLPARLFPSFNPLRLAPNPLISPKRRGTI 60

Query: 61  SSSSSSSLLLLKAFGTLEHRRGQFCSETRASSSPITP-TVSPNDEAEKAKLAQVAKRLEK 120
           SS  S S  LL  F  +   +      T ASS P +P ++S + E +KAKLAQVAKRLEK
Sbjct: 61  SSYQSPSSPLLHGF-QIRGSKPSLAPFTVASSYPTSPGSISGDSEVDKAKLAQVAKRLEK 120

Query: 121 TSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWS 180
           TS+YFKRLGS+GFWGQLV T+VAAVILSFSV +TGK TSPATFYATA GI AAF+SVFWS
Sbjct: 121 TSRYFKRLGSIGFWGQLVSTLVAAVILSFSVAVTGKPTSPATFYATASGIAAAFVSVFWS 180

Query: 181 FGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKAL 240
           FGYIRLS++L+RTA  P+KAPPRADVV  LR+GI+VNL+GMGAAILGMQATVG LVAKAL
Sbjct: 181 FGYIRLSERLRRTAADPAKAPPRADVVKGLRSGIMVNLVGMGAAILGMQATVGFLVAKAL 240

Query: 241 TSSAVPYYQAASPGNSPVLALDVFLVQISEQRSGYNNSTVAGDRRTRNLKQTEMLPTASR 300
           T+SA P+YQ  S G SPVLALDVFLVQ                                 
Sbjct: 241 TTSASPFYQGVSQGYSPVLALDVFLVQ--------------------------------- 300

Query: 301 GRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQW 360
                                  WQQMD+EYTFWQML+LCTSPKVVYQHTKYHKQTKNQW
Sbjct: 301 -----------------------WQQMDVEYTFWQMLNLCTSPKVVYQHTKYHKQTKNQW 360

Query: 361 ARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILATCC---- 420
           ARDDPAF+VICSLLL VATLAYCA YDHS +HA  VVVSV L H LITGA++ATCC    
Sbjct: 361 ARDDPAFIVICSLLLIVATLAYCATYDHSGSHAVVVVVSVFLTHFLITGAVIATCCWFLT 420

Query: 421 -------------------WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHGFIPLLLS 480
                              WLY FDVHCNSFFPMFVLLYV+HYF+SPLL+ HGFI LLLS
Sbjct: 421 NSYLREEAPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLITHGFIALLLS 480

Query: 481 NLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMNMY 519
           NLLFM+GASYYHY+NFLGYDVLPFLE+TTFFLYPIG+V VL+PI IL GFNPSRYFMNMY
Sbjct: 481 NLLFMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGIVIVLSPILILSGFNPSRYFMNMY 482

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BLAST of ClCG02G006310.2 vs. NCBI nr
Match: XP_038888764.1 (protein TIC 21, chloroplastic [Benincasa hispida])

HSP 1 Score: 460.3 bits (1183), Expect = 2.2e-125
Identity = 249/265 (93.96%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSFCHSSNLNSPPNSLPSFSAIRSSS 60
           MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFS  HSSNLNSPPNSL SF+A+R SS
Sbjct: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSVRHSSNLNSPPNSLSSFNAVR-SS 60

Query: 61  SSSSLLLLKAFGTLEHRRGQFCSETRASSSPITPTVSPNDEAEKAKLAQVAKRLEKTSKY 120
           SSSSLLLLK FGTLEHRRGQF SET ASSSPI+P V PNDEA+KAKLAQVAKRLEKTSKY
Sbjct: 61  SSSSLLLLKTFGTLEHRRGQFFSETHASSSPISPAVPPNDEADKAKLAQVAKRLEKTSKY 120

Query: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180
           FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI
Sbjct: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180

Query: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240
           RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA
Sbjct: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240

Query: 241 VPYYQAASPGNSPVLALDVFLVQIS 266
           +PYYQ ASPGNSPVLALDVFLVQ S
Sbjct: 241 IPYYQGASPGNSPVLALDVFLVQAS 264

[Close]

BLAST of ClCG02G006310.2 vs. NCBI nr
Match: KAG7022476.1 (Protein unc-50-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444.1 bits (1141), Expect = 1.6e-120
Identity = 227/247 (91.90%), Postives = 235/247 (95.14%), Query Frame = 0


Query: 272 NNSTVAGDRRTRNLKQTEMLPTASRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQ 331
           N+S     + TR    T+MLPTASRGRSSSS+SRANPMYLQYLRRIVKWQQMDIEYTFWQ
Sbjct: 53  NSSCHWTKKATRFEVHTDMLPTASRGRSSSSTSRANPMYLQYLRRIVKWQQMDIEYTFWQ 112

Query: 332 MLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASF 391
           ML LCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSA+HA+F
Sbjct: 113 MLQLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSASHATF 172

Query: 392 VVVSVLLFHLLITGAILATCCWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHGFIPLL 451
           VV+SVLL HLLITGAILATCCWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHGFIPLL
Sbjct: 173 VVISVLLSHLLITGAILATCCWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHGFIPLL 232

Query: 452 LSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMN 511
           LSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMN
Sbjct: 233 LSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMN 292

Query: 512 MYFSQNL 519
           MYFS+NL
Sbjct: 293 MYFSRNL 299

[Close]

BLAST of ClCG02G006310.2 vs. NCBI nr
Match: XP_004136957.1 (protein TIC 21, chloroplastic [Cucumis sativus] >KGN43879.1 hypothetical protein Csa_017075 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 5.2e-119
Identity = 242/265 (91.32%), Postives = 246/265 (92.83%), Query Frame = 0


Query: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSFCHSSNLNSPPNSLPSFSAIRSSS 60
           MQSLLSPVAR+GPFPA AAVYSSDLHLSRFHRRP S  HS       NSLP FSAI   S
Sbjct: 1   MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSF------NSLPPFSAI--PS 60

Query: 61  SSSSLLLLKAFGTLEHRRGQFCSETRASSSPITPTVSPNDEAEKAKLAQVAKRLEKTSKY 120
           SSSSLLLLK FGTL+H RGQ CSETRASSSPI+PTVSPNDEAEKAKLAQVAKRLEKTSKY
Sbjct: 61  SSSSLLLLKTFGTLKHSRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKY 120

Query: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180
           FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI
Sbjct: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180

Query: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240
           RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA
Sbjct: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240

Query: 241 VPYYQAASPGNSPVLALDVFLVQIS 266
           +PYYQAASPGNSPVLALDVFLVQ S
Sbjct: 241 IPYYQAASPGNSPVLALDVFLVQAS 257

[Close]

BLAST of ClCG02G006310.2 vs. NCBI nr
Match: XP_004136958.1 (protein unc-50 homolog [Cucumis sativus] >KGN43880.1 hypothetical protein Csa_017158 [Cucumis sativus])

HSP 1 Score: 438.0 bits (1125), Expect = 1.2e-118
Identity = 226/252 (89.68%), Postives = 229/252 (90.87%), Query Frame = 0


Query: 290 MLPTASRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 349
           MLPTASRGRSSSS+SRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH
Sbjct: 1   MLPTASRGRSSSSTSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 60

Query: 350 KQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILA 409
           KQTKNQWARDDPAF+VICSLLLAVATLAYCAAYDHSAAHASFVV+SVLLFHLLITGAILA
Sbjct: 61  KQTKNQWARDDPAFIVICSLLLAVATLAYCAAYDHSAAHASFVVISVLLFHLLITGAILA 120

Query: 410 TCC-----------------------WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG 469
           TCC                       WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG
Sbjct: 121 TCCWLLTNAYLREETPGSHVVEQRVEWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG 180

Query: 470 FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS 519
           FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS
Sbjct: 181 FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS 240

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy Swiss-Prot
Match: Q9SHU7 (Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-67
Identity = 164/275 (59.64%), Postives = 191/275 (69.45%), Query Frame = 0


Query: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSFCHSSNLNS-PPNSLPSFSAI--- 60
           MQSLL P A S    A A              RP  F HS N  S    SLP F+ +   
Sbjct: 1   MQSLLLPPASSSGVSAVAL-------------RP-GFQHSFNHQSLSTRSLPLFNPLLLA 60

Query: 61  ----RSSSSSSSLLLLKAFG-TLEHRRGQFCSETRASSSPITPTVSPND-EAEKAKLAQV 120
                + SS  S   L  +G  +   +  F   T A S P +P+  P D E +KAKLAQV
Sbjct: 61  PKKKTTISSYQSPPSLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQV 120

Query: 121 AKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAF 180
           AKRLEKTS+YFKRLGS+GFWGQLV T+VAAVILSFS+V+TGK TSPATFYATA GI AAF
Sbjct: 121 AKRLEKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAF 180

Query: 181 ISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGL 240
           +SVFWSFGYIRLS++L+RT+  P+KAPPRADVV  LR+GI+VN+LGMG+A+LGMQATVG 
Sbjct: 181 VSVFWSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGF 240

Query: 241 LVAKALTSSAVPYYQAASPGNSPVLALDVFLVQIS 266
           LVAKALT+SA P+YQ  S G SPVLALDVFLVQ S
Sbjct: 241 LVAKALTTSANPFYQGVSQGYSPVLALDVFLVQAS 261

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy Swiss-Prot
Match: Q54DD7 (Protein unc-50 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292320 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.6e-47
Identity = 105/247 (42.51%), Postives = 152/247 (61.54%), Query Frame = 0


Query: 295 SRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKN 354
           +R  ++SS+SR   +  +Y RRI  + QMDIEYTFW M +LC +P  VY+ T +HKQTKN
Sbjct: 15  TRDGTASSASRYRRLIPEYFRRIFHYPQMDIEYTFWIMFYLCFNPSRVYRVTSWHKQTKN 74

Query: 355 QWARDDPAFVVICSLLLAVATLAYCAAYDHS-----------AAHASFVVVSVLLFHL-- 414
           QWARDDPAF VI    +A+A+++Y   +              A    F+ V +L+  +  
Sbjct: 75  QWARDDPAFAVILVFFMAIASMSYAITFHFLSFLNVIKVMFWAVFVDFITVGLLIATIGW 134

Query: 415 LITGAILATCC----------WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHGFIPLL 474
            +T   L              WLYAFD+HCNSFFP+F++LYV+ +F+ P+L+++     +
Sbjct: 135 WVTNKFLRVSVHNHSVDQSVEWLYAFDIHCNSFFPLFIILYVVQFFLLPILLSNSLFAAI 194

Query: 475 LSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMN 519
           LSN L++IG SYY+YV FLGY+ LPFL+ T  FLYPIG++F L  + +++G N +   +N
Sbjct: 195 LSNTLYIIGFSYYYYVTFLGYNALPFLQHTVVFLYPIGILFALYIVSVVMGKNLTVSIIN 254

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy Swiss-Prot
Match: Q53HI1 (Protein unc-50 homolog OS=Homo sapiens OX=9606 GN=UNC50 PE=1 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 1.0e-32
Identity = 83/222 (37.39%), Postives = 130/222 (58.56%), Query Frame = 0


Query: 312 QYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLL 371
           +YLRR+ +++QMD E+  WQML+L TSP+ VY++  Y KQTK+QWARDDPAF+V+ S+ L
Sbjct: 33  KYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWL 92

Query: 372 AVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILATCCWL----------------- 431
            V+T+ +    D        +++ V+L   +  G ++AT  W                  
Sbjct: 93  CVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQSRDYDVE 152

Query: 432 --YAFDVHCNSFFPMFVLLYVIH-YFISPLLVAHGFIPLLLSNLLFMIGASYYHYVNFLG 491
             YAFDVH N+F+P+ V+L+ I  +FI+ +++   FI  L+ N L+++   YY YV FLG
Sbjct: 153 WGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLG 212

Query: 492 YDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMNMY 514
           Y  LPFL+ T   LYP   + +L  + + +G+N +    + Y
Sbjct: 213 YSALPFLKNTVILLYPFAPLILLYGLSLALGWNFTHTLCSFY 254

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy Swiss-Prot
Match: Q9CQ61 (Protein unc-50 homolog OS=Mus musculus OX=10090 GN=Unc50 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-32
Identity = 83/222 (37.39%), Postives = 129/222 (58.11%), Query Frame = 0


Query: 312 QYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLL 371
           +YLRR+ +++QMD E+  WQML+L TSP+ VY++  Y KQTK+QWARDDPAF+V+ S+ L
Sbjct: 33  KYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWL 92

Query: 372 AVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILATCCWL----------------- 431
            V+T+ +    D        +++ V+    +  G +++T  W                  
Sbjct: 93  CVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTLMWFVSNKYLVKRQSRDYDVE 152

Query: 432 --YAFDVHCNSFFPMFVLLYVIH-YFISPLLVAHGFIPLLLSNLLFMIGASYYHYVNFLG 491
             YAFDVH N+F+P+ V+L+ I  +FI+ +++   FI  L+ N L++I   YY YV FLG
Sbjct: 153 WGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLIAVGYYIYVTFLG 212

Query: 492 YDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMNMY 514
           Y  LPFL+ T   LYP   + VL  + + +G+N +    + Y
Sbjct: 213 YSALPFLKNTVILLYPFAPLMVLYGLSLALGWNFTHTLCSFY 254

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy Swiss-Prot
Match: O55227 (Protein unc-50 homolog OS=Rattus norvegicus OX=10116 GN=Unc50 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.0e-32
Identity = 83/222 (37.39%), Postives = 129/222 (58.11%), Query Frame = 0


Query: 312 QYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLL 371
           +YLRR+ +++QMD E+  WQML+L TSP+ VY++  Y KQTK+QWARDDPAF+V+ S+ L
Sbjct: 33  KYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWL 92

Query: 372 AVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILATCCWL----------------- 431
            V+T+ +    D        +++ V+    +  G +++T  W                  
Sbjct: 93  CVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTLMWFISNKYLVKRQSRDYDVE 152

Query: 432 --YAFDVHCNSFFPMFVLLYVIH-YFISPLLVAHGFIPLLLSNLLFMIGASYYHYVNFLG 491
             YAFDVH N+F+P+ V+L+ I  +FI+ +++   FI  L+ N L++I   YY YV FLG
Sbjct: 153 WGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLIAVGYYIYVTFLG 212

Query: 492 YDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMNMY 514
           Y  LPFL+ T   LYP   + VL  + + +G+N +    + Y
Sbjct: 213 YSALPFLKNTVVLLYPFAPLIVLYGLSLALGWNFTHTLCSFY 254

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy TrEMBL
Match: A0A0A0K4J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 2.5e-119
Identity = 242/265 (91.32%), Postives = 246/265 (92.83%), Query Frame = 0


Query: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSFCHSSNLNSPPNSLPSFSAIRSSS 60
           MQSLLSPVAR+GPFPA AAVYSSDLHLSRFHRRP S  HS       NSLP FSAI   S
Sbjct: 1   MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSF------NSLPPFSAI--PS 60

Query: 61  SSSSLLLLKAFGTLEHRRGQFCSETRASSSPITPTVSPNDEAEKAKLAQVAKRLEKTSKY 120
           SSSSLLLLK FGTL+H RGQ CSETRASSSPI+PTVSPNDEAEKAKLAQVAKRLEKTSKY
Sbjct: 61  SSSSLLLLKTFGTLKHSRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKY 120

Query: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180
           FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI
Sbjct: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180

Query: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240
           RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA
Sbjct: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240

Query: 241 VPYYQAASPGNSPVLALDVFLVQIS 266
           +PYYQAASPGNSPVLALDVFLVQ S
Sbjct: 241 IPYYQAASPGNSPVLALDVFLVQAS 257

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy TrEMBL
Match: A0A0A0K2I1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071690 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 5.7e-119
Identity = 226/252 (89.68%), Postives = 229/252 (90.87%), Query Frame = 0


Query: 290 MLPTASRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 349
           MLPTASRGRSSSS+SRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH
Sbjct: 1   MLPTASRGRSSSSTSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 60

Query: 350 KQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILA 409
           KQTKNQWARDDPAF+VICSLLLAVATLAYCAAYDHSAAHASFVV+SVLLFHLLITGAILA
Sbjct: 61  KQTKNQWARDDPAFIVICSLLLAVATLAYCAAYDHSAAHASFVVISVLLFHLLITGAILA 120

Query: 410 TCC-----------------------WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG 469
           TCC                       WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG
Sbjct: 121 TCCWLLTNAYLREETPGSHVVEQRVEWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG 180

Query: 470 FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS 519
           FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS
Sbjct: 181 FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS 240

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy TrEMBL
Match: A0A5A7SP50 (Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 241/271 (88.93%), Postives = 245/271 (90.41%), Query Frame = 0


Query: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSFCHSSNLNSPPNSLPSFSAI---- 60
           MQSLLSPVAR+GPFP  AAVYSSD HLSR HRRPFS  HS       NSLP FSAI    
Sbjct: 1   MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSF------NSLPQFSAISSSS 60

Query: 61  --RSSSSSSSLLLLKAFGTLEHRRGQFCSETRASSSPITPTVSPNDEAEKAKLAQVAKRL 120
              SSSSSSSLLLLK FGTLEHRRGQ CSETRASSSPI+PTV PNDEAEKAKLAQVAKRL
Sbjct: 61  SSSSSSSSSSLLLLKTFGTLEHRRGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRL 120

Query: 121 EKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVF 180
           EKTS+YFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKI SPATFYATAGGIVAAFISVF
Sbjct: 121 EKTSRYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVF 180

Query: 181 WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAK 240
           WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAK
Sbjct: 181 WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAK 240

Query: 241 ALTSSAVPYYQAASPGNSPVLALDVFLVQIS 266
           ALTSSA+PYYQAASPGNSPVLALDVFLVQ S
Sbjct: 241 ALTSSAIPYYQAASPGNSPVLALDVFLVQAS 265

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy TrEMBL
Match: A0A5D3C4E1 (Protein unc-50-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00950 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 225/252 (89.29%), Postives = 228/252 (90.48%), Query Frame = 0


Query: 290 MLPTASRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 349
           MLPTASRGRSSSS+SR NPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH
Sbjct: 1   MLPTASRGRSSSSTSRTNPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 60

Query: 350 KQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILA 409
           KQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVV+SVL+FHLLITGAILA
Sbjct: 61  KQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVISVLIFHLLITGAILA 120

Query: 410 TCC-----------------------WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG 469
           TCC                       WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG
Sbjct: 121 TCCWLLTNAYLREETPGSHVVEQRVEWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG 180

Query: 470 FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS 519
           FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS
Sbjct: 181 FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS 240

[Close]

BLAST of ClCG02G006310.2 vs. ExPASy TrEMBL
Match: A0A6J1D6A1 (protein unc-50 homolog OS=Momordica charantia OX=3673 GN=LOC111017322 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 225/252 (89.29%), Postives = 228/252 (90.48%), Query Frame = 0


Query: 290 MLPTASRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 349
           MLPTASRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH
Sbjct: 1   MLPTASRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 60

Query: 350 KQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILA 409
           KQTKNQWARDDPAFVVICSLLL VATLAYCAAYDHSAAHA+FVV+SVLLFHLLITGAILA
Sbjct: 61  KQTKNQWARDDPAFVVICSLLLTVATLAYCAAYDHSAAHATFVVISVLLFHLLITGAILA 120

Query: 410 TCC-----------------------WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG 469
           TCC                       WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG
Sbjct: 121 TCCWLLTNAYLREETPGSHVVEQRVEWLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG 180

Query: 470 FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS 519
           FIPLLLSN+LFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS
Sbjct: 181 FIPLLLSNMLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS 240

[Close]

BLAST of ClCG02G006310.2 vs. TAIR 10
Match: AT2G15240.1 (UNC-50 family protein )

HSP 1 Score: 392.5 bits (1007), Expect = 5.2e-109
Identity = 197/252 (78.17%), Postives = 213/252 (84.52%), Query Frame = 0


Query: 290 MLPTASRGRSSSSSSRANPMYLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 349
           MLPT SR RSSSSSSRANPM+LQY RRIVKWQQMD+EYTFWQML+LCTSPKVVYQHTKYH
Sbjct: 1   MLPTTSRSRSSSSSSRANPMFLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYH 60

Query: 350 KQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVVSVLLFHLLITGAILA 409
           KQTKNQWARDDPAF+VICSLLL VAT+AYC  YDHS++HA  VVVSVL  H LITGA++A
Sbjct: 61  KQTKNQWARDDPAFIVICSLLLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGAVIA 120

Query: 410 TCC-----------------------WLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHG 469
           TCC                       WLY FDVHCNSFFPMFVLLYV+HYF+SPLL+AHG
Sbjct: 121 TCCWFLTNSYLREETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHG 180

Query: 470 FIPLLLSNLLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPS 519
           FIPLLLSNLLFM+GASYYHY+NFLGYDVLPFLE+TTFFLYPIGVV VL+PI IL GFNPS
Sbjct: 181 FIPLLLSNLLFMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPS 240

[Close]

BLAST of ClCG02G006310.2 vs. TAIR 10
Match: AT2G15290.1 (translocon at inner membrane of chloroplasts 21 )

HSP 1 Score: 258.8 bits (660), Expect = 9.0e-69
Identity = 164/275 (59.64%), Postives = 191/275 (69.45%), Query Frame = 0


Query: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSFCHSSNLNS-PPNSLPSFSAI--- 60
           MQSLL P A S    A A              RP  F HS N  S    SLP F+ +   
Sbjct: 1   MQSLLLPPASSSGVSAVAL-------------RP-GFQHSFNHQSLSTRSLPLFNPLLLA 60

Query: 61  ----RSSSSSSSLLLLKAFG-TLEHRRGQFCSETRASSSPITPTVSPND-EAEKAKLAQV 120
                + SS  S   L  +G  +   +  F   T A S P +P+  P D E +KAKLAQV
Sbjct: 61  PKKKTTISSYQSPPSLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQV 120

Query: 121 AKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAF 180
           AKRLEKTS+YFKRLGS+GFWGQLV T+VAAVILSFS+V+TGK TSPATFYATA GI AAF
Sbjct: 121 AKRLEKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAF 180

Query: 181 ISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGL 240
           +SVFWSFGYIRLS++L+RT+  P+KAPPRADVV  LR+GI+VN+LGMG+A+LGMQATVG 
Sbjct: 181 VSVFWSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGF 240

Query: 241 LVAKALTSSAVPYYQAASPGNSPVLALDVFLVQIS 266
           LVAKALT+SA P+YQ  S G SPVLALDVFLVQ S
Sbjct: 241 LVAKALTTSANPFYQGVSQGYSPVLALDVFLVQAS 261

The following BLAST results are available for this feature:

BLAST of ClCG02G006310.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG2277965.1	8.8e-159	61.47	hypothetical protein Bca52824_060520 [Brassica carinata]	[more]
XP_038888764.1	2.2e-125	93.96	protein TIC 21, chloroplastic [Benincasa hispida]	[more]
KAG7022476.1	1.6e-120	91.90	Protein unc-50-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_004136957.1	5.2e-119	91.32	protein TIC 21, chloroplastic [Cucumis sativus] >KGN43879.1 hypothetical protein...	[more]
XP_004136958.1	1.2e-118	89.68	protein unc-50 homolog [Cucumis sativus] >KGN43880.1 hypothetical protein Csa_01...	[more]

BLAST of ClCG02G006310.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHU7	1.3e-67	59.64	Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1	[more]
Q54DD7	5.6e-47	42.51	Protein unc-50 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292320 PE=3...	[more]
Q53HI1	1.0e-32	37.39	Protein unc-50 homolog OS=Homo sapiens OX=9606 GN=UNC50 PE=1 SV=2	[more]
Q9CQ61	2.3e-32	37.39	Protein unc-50 homolog OS=Mus musculus OX=10090 GN=Unc50 PE=2 SV=1	[more]
O55227	3.0e-32	37.39	Protein unc-50 homolog OS=Rattus norvegicus OX=10116 GN=Unc50 PE=1 SV=1	[more]

BLAST of ClCG02G006310.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4J8	2.5e-119	91.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1	[more]
A0A0A0K2I1	5.7e-119	89.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071690 PE=3 SV=1	[more]
A0A5A7SP50	2.1e-118	88.93	Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 ...	[more]
A0A5D3C4E1	2.1e-118	89.29	Protein unc-50-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1D6A1	2.1e-118	89.29	protein unc-50 homolog OS=Momordica charantia OX=3673 GN=LOC111017322 PE=3 SV=1	[more]

BLAST of ClCG02G006310.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15240.1	5.2e-109	78.17	UNC-50 family protein	[more]
AT2G15290.1	9.0e-69	59.64	translocon at inner membrane of chloroplasts 21	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007881	UNC-50	PFAM	PF05216	UNC-50	coord: 313..414 e-value: 1.9E-35 score: 122.5 coord: 413..514 e-value: 2.7E-29 score: 102.3
IPR007881	UNC-50	PANTHER	PTHR12841	PROTEIN UNC-50 HOMOLOG	coord: 290..414
IPR007881	UNC-50	PANTHER	PTHR12841	PROTEIN UNC-50 HOMOLOG	coord: 413..518
IPR022051	Protein of unknown function DUF3611	PFAM	PF12263	DUF3611	coord: 112..264 e-value: 2.1E-42 score: 145.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..305
None	No IPR available	PANTHER	PTHR12841:SF7	BNAA07G03880D PROTEIN	coord: 290..414
None	No IPR available	PANTHER	PTHR12841:SF7	BNAA07G03880D PROTEIN	coord: 413..518

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG02G006310	ClCG02G006310	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7116431..7116845	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7121788..7122045	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7122916..7123119	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7125277..7125444	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7126107..7126174	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7126306..7126331	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7127098..7127188	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7127575..7127670	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7129380..7129438	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7129519..7129641	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7130840..7130911	exon
ClCG02G006310.2-exon	ClCG02G006310.2-exon-CG_Chr02:7130996..7132117	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G006310.2-five_prime_utr	ClCG02G006310.2-five_prime_utr-CG_Chr02:7116431..7116518	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7116519..7116845	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7121788..7122045	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7122916..7123119	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7125277..7125444	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7126107..7126174	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7126306..7126331	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7127098..7127188	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7127575..7127670	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7129380..7129438	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7129519..7129641	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7130840..7130911	CDS
ClCG02G006310.2-cds	ClCG02G006310.2-cds-CG_Chr02:7130996..7131060	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G006310.2-three_prime_utr	ClCG02G006310.2-three_prime_utr-CG_Chr02:7131061..7132117	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG02G006310.2	ClCG02G006310.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0030173	integral component of Golgi membrane