ClCG02G002140.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G002140.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Coiled-coil domain-containing protein 21, putative isoform 2
Location	CG_Chr02: 2199102 .. 2200936 (+)
Sequence length	768
RNA-Seq Expression	ClCG02G002140.1
Synteny	ClCG02G002140.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTTTTGGCCGGAAGATTGGCCGGCAAAGAGGCGGCATATTTTATTCAGGAATCCAAACACGCCGTCGGCCGGCTTGCCCAGAAAAACACCACCCAGAAATTCCCGGCGCAATCACCGCCTTCTTCCCATTCTCCGGCGGACGGTGAATCGCAAGCCGACATTCTTCCTGAGGTCTTAAGGCACTCTCTGCCCTCTAAATTCTTCAGGGAGGAATCTGCAGGCTCCAACGGATCCTTCTCTACTTCGAAATGGGTTCTTCCTTCGAACCCTAATTACCGCTCTGTCTCGTTAGATGCTCTCAACCCTCTTAGGGGTTTCCTCTCCCTTCCTCAGGTTACATTCGGCCCCAAAAGGTTCATTTTCACCCACAATTTGATTCAATTTTCCCTTTGATTTGTTTTGGTTGTCATGAAAATGCAGAATTTCGAAATGGAACTTCCAATTCTTTTCCTGTTTGTGTTTCTTAATACCTATGCCTAATTGGGTTTTAGTTCGATGAACTAGATTTTGATAATCATCCTTATTGACGTGGTTTGATTTTCTTCTTCTTTGTTCATTTCTATGTGATACTGTCTGTGGTGCATAGTCTGTACTCGAAGTTGGTTGTTCTAATACTTTTTTCTTTGTAAATTAGCTTTGGGACAATGGGAAAATTTTCCTTTCTGGGTGACACAGTACAGGCATGTGCCTTTAACTGAAGAAACAGTAGTTGGTAGTGATTGTTGGATCAAGATGTCAATCCTATAATGATTCTTATGCACTTGGAAAGTAAATAGTATACATGAAGTTGAAAATTTTTTATTTGCTGCTCAAAAAGTTGCTTGGACATGTGCTTTTGTAACAGTTTGTATCACTTGATGTTGGGAACGGTGGAATACAACTAAGTACAACACGCCCTTGTATCTAAAGAGTTCTATAACTGCCTTTTGAAGTTTCCCAGCAAACAAAATAACTATCTTTTTCTCTCATCCTCAACAGTTTGTGCCATATCTTGTAATTCTTTTTTTGTTTTTGGTTTTGTGTTGGCTTCTGTTGGGTTGAAGTTTTTCTGCTTGTCCTTTTTCTGTCTTGCCATTCGTCTTCTTTCATTTTCTCTAGAAAGTTCAGTTTCTCATGAAAAAATTTAAGTTGAATGCAGGTGGGAATTGCCTCAATCTGAAAACTCAGTACTAGCCTCAACTGCTAACGATTTGCGGACCGACAAGCATACTCCTATTAATCCGGAGAAGTTGAAGGCTGCTGCTGAAGGCCTTGCACATGGTAACCTTTAAAAGGAAAAACTTACCTCTTTCTCCCTCATCCTAATCACTAGACCTTTGGTTTTCATGCAGTTGGAAAGGCATTTGCTGTAGCTACTGCGCTTGTCTTTGGTGGTGCCACCTTGATCTTTGGACTCACCATCTCCAAACTAGATATCGACAATGTAAACATGGATTGGATTTCTTAACTTTTGGTGGTCTTTGTATATGCACATACATTTCCATTTAACTCAGATCATGGCAACTTCATTTTTTGACAGGCAAGTGAGATTCAAACAAAAGGAAAAAGCATGATTGAACCAAAGATGGAAATGATCAGAGAGCAACTTGTTCCCTTCAAAGTCTGGGTATGTTGTTATCATTTAAATGATTCTCACAGCATTCACCTGTTACTGGATCTTACTTTTGCCAGTTCTTTATCTAACCAAGGGTGTTTTTTTTTTTTTTCCTCCCGAGTTTTAGGCTAATGATGTGTCAAAAAAATGGCATGTGGAAAGAGATGAAGATATCAAAGAGAAGCCTCTGATAAAGGAACTCTCAAAGATTTTGGGTGCCAAGACTCCCAACTAA

mRNA sequence

ATGAGTTTTTTGGCCGGAAGATTGGCCGGCAAAGAGGCGGCATATTTTATTCAGGAATCCAAACACGCCGTCGGCCGGCTTGCCCAGAAAAACACCACCCAGAAATTCCCGGCGCAATCACCGCCTTCTTCCCATTCTCCGGCGGACGGTGAATCGCAAGCCGACATTCTTCCTGAGGTCTTAAGGCACTCTCTGCCCTCTAAATTCTTCAGGGAGGAATCTGCAGGCTCCAACGGATCCTTCTCTACTTCGAAATGGGTTCTTCCTTCGAACCCTAATTACCGCTCTGTCTCGTTAGATGCTCTCAACCCTCTTAGGGGTTTCCTCTCCCTTCCTCAGGTTACATTCGGCCCCAAAAGGTGGGAATTGCCTCAATCTGAAAACTCAGTACTAGCCTCAACTGCTAACGATTTGCGGACCGACAAGCATACTCCTATTAATCCGGAGAAGTTGAAGGCTGCTGCTGAAGGCCTTGCACATGTTGGAAAGGCATTTGCTGTAGCTACTGCGCTTGTCTTTGGTGGTGCCACCTTGATCTTTGGACTCACCATCTCCAAACTAGATATCGACAATGCAAGTGAGATTCAAACAAAAGGAAAAAGCATGATTGAACCAAAGATGGAAATGATCAGAGAGCAACTTGTTCCCTTCAAAGTCTGGGCTAATGATGTGTCAAAAAAATGGCATGTGGAAAGAGATGAAGATATCAAAGAGAAGCCTCTGATAAAGGAACTCTCAAAGATTTTGGGTGCCAAGACTCCCAACTAA

Coding sequence (CDS)

ATGAGTTTTTTGGCCGGAAGATTGGCCGGCAAAGAGGCGGCATATTTTATTCAGGAATCCAAACACGCCGTCGGCCGGCTTGCCCAGAAAAACACCACCCAGAAATTCCCGGCGCAATCACCGCCTTCTTCCCATTCTCCGGCGGACGGTGAATCGCAAGCCGACATTCTTCCTGAGGTCTTAAGGCACTCTCTGCCCTCTAAATTCTTCAGGGAGGAATCTGCAGGCTCCAACGGATCCTTCTCTACTTCGAAATGGGTTCTTCCTTCGAACCCTAATTACCGCTCTGTCTCGTTAGATGCTCTCAACCCTCTTAGGGGTTTCCTCTCCCTTCCTCAGGTTACATTCGGCCCCAAAAGGTGGGAATTGCCTCAATCTGAAAACTCAGTACTAGCCTCAACTGCTAACGATTTGCGGACCGACAAGCATACTCCTATTAATCCGGAGAAGTTGAAGGCTGCTGCTGAAGGCCTTGCACATGTTGGAAAGGCATTTGCTGTAGCTACTGCGCTTGTCTTTGGTGGTGCCACCTTGATCTTTGGACTCACCATCTCCAAACTAGATATCGACAATGCAAGTGAGATTCAAACAAAAGGAAAAAGCATGATTGAACCAAAGATGGAAATGATCAGAGAGCAACTTGTTCCCTTCAAAGTCTGGGCTAATGATGTGTCAAAAAAATGGCATGTGGAAAGAGATGAAGATATCAAAGAGAAGCCTCTGATAAAGGAACTCTCAAAGATTTTGGGTGCCAAGACTCCCAACTAA

Protein sequence

MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEVLRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKRWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIFGLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKPLIKELSKILGAKTPN

Homology

[Close]

BLAST of ClCG02G002140.1 vs. NCBI nr
Match: XP_038887935.1 (uncharacterized protein LOC120077905 [Benincasa hispida])

HSP 1 Score: 475.3 bits (1222), Expect = 3.3e-130
Identity = 239/255 (93.73%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLA KEAAYFIQESKHAVGRLAQKN  QKFPAQSPPSSHSP DGESQADILPEV
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKNPAQKFPAQSPPSSHSPVDGESQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FREESA SNGSFSTSKWVLPSNPNYRSVS+D+LNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREESADSNGSFSTSKWVLPSNPNYRSVSIDSLNPLRAFLSLPQVTFGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQSENSVLASTANDLRTDKHTP+NPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF
Sbjct: 121 WELPQSENSVLASTANDLRTDKHTPVNPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G TISKLD++NASEIQTKGKSMIEPKMEMIREQL+PFKVWA+D+SKKWHVERDEDIKEKP
Sbjct: 181 GYTISKLDLNNASEIQTKGKSMIEPKMEMIREQLIPFKVWADDMSKKWHVERDEDIKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSKILGAKTPN
Sbjct: 241 LIKELSKILGAKTPN 255

[Close]

BLAST of ClCG02G002140.1 vs. NCBI nr
Match: XP_008455465.1 (PREDICTED: uncharacterized protein LOC103495622 [Cucumis melo])

HSP 1 Score: 465.7 bits (1197), Expect = 2.6e-127
Identity = 235/255 (92.16%), Postives = 245/255 (96.08%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT QKFPA+SPPSSHS ADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAQKFPAKSPPSSHSLADGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FREESA S+GSFSTSKWVLPS+PNYRSVS DALNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREESANSSGSFSTSKWVLPSDPNYRSVSSDALNPLRAFLSLPQVTFGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQSENS+LASTANDLRTDKHTP+NPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF
Sbjct: 121 WELPQSENSILASTANDLRTDKHTPMNPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G T+SKLD++NASEIQTKGKSMIEPKMEMIR+Q VPFKVWA+DVSKKWHVERD DIKEKP
Sbjct: 181 GFTMSKLDVNNASEIQTKGKSMIEPKMEMIRQQFVPFKVWADDVSKKWHVERDNDIKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSKILGAKTPN
Sbjct: 241 LIKELSKILGAKTPN 255

[Close]

BLAST of ClCG02G002140.1 vs. NCBI nr
Match: XP_004144510.1 (uncharacterized protein LOC101204303 [Cucumis sativus] >KGN43498.1 hypothetical protein Csa_020421 [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 1.0e-123
Identity = 229/255 (89.80%), Postives = 240/255 (94.12%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT  KFPAQSPPSSHS   GE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAHKFPAQSPPSSHSLPHGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPS  FREESA S+GSFSTSKWVLPS+PNYRSVS ++LNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSTIFREESANSSGSFSTSKWVLPSDPNYRSVSSNSLNPLRDFLSLPQVTFGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQSENS+LASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFA ATALVFGGATLIF
Sbjct: 121 WELPQSENSILASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAAATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G T+SKLD++NASEIQTKGK MIEPKMEMIR+QLVPFKVWA+D+SKKWHVERD DIKEKP
Sbjct: 181 GFTLSKLDVNNASEIQTKGKGMIEPKMEMIRQQLVPFKVWADDMSKKWHVERDNDIKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSKILGAKTPN
Sbjct: 241 LIKELSKILGAKTPN 255

[Close]

BLAST of ClCG02G002140.1 vs. NCBI nr
Match: XP_022135886.1 (uncharacterized protein LOC111007726 [Momordica charantia])

HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-122
Identity = 224/255 (87.84%), Postives = 239/255 (93.73%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHA+GRL QKNTTQKFPAQ PPSSHSPADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAIGRLVQKNTTQKFPAQPPPSSHSPADGELQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FRE+SA SNGS  TSKWVLPS+PN RSVS DALNPLR FL+LPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREQSADSNGSLVTSKWVLPSDPNRRSVSSDALNPLRAFLTLPQVTFGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQSENSVLASTANDLR DKHT INPEKLKAAAEGLAHVGKAFA+ATALVFGGATLIF
Sbjct: 121 WELPQSENSVLASTANDLRADKHTTINPEKLKAAAEGLAHVGKAFAIATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G T+SKLD++N++EIQTKG+++IEPKMEMIREQLVPFK WA D+SKKWHVERD+DIKEKP
Sbjct: 181 GFTVSKLDLNNSNEIQTKGRNLIEPKMEMIREQLVPFKTWAEDMSKKWHVERDKDIKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSK LGAKTPN
Sbjct: 241 LIKELSKTLGAKTPN 255

[Close]

BLAST of ClCG02G002140.1 vs. NCBI nr
Match: XP_022969227.1 (uncharacterized protein LOC111468292 [Cucurbita maxima] >XP_022969228.1 uncharacterized protein LOC111468292 [Cucurbita maxima])

HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-116
Identity = 218/255 (85.49%), Postives = 237/255 (92.94%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLA KEAAYFIQESKHAVGRLA     QKFPAQ PPSS+S  DGESQADILPEV
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLA-----QKFPAQPPPSSNSTTDGESQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK +RE+SA S+GS STSKWVLPSNPNYRSVS D+LNPLR F+SLPQV+FGPKR
Sbjct: 61  LRHSLPSKIYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSFGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQS NSVLASTANDLRTDKHTPINPEKLKAAAEGLAH+GKAFAVATALVFGGATLIF
Sbjct: 121 WELPQSGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G+T+SKLD++NA+EIQTKGKSMIEP+M+MIREQLVPFKVWA+ +SKKWHVER++D KEKP
Sbjct: 181 GITMSKLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDTKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSK LGAKTPN
Sbjct: 241 LIKELSKTLGAKTPN 250

[Close]

BLAST of ClCG02G002140.1 vs. ExPASy TrEMBL
Match: A0A1S3C0Z0 (uncharacterized protein LOC103495622 OS=Cucumis melo OX=3656 GN=LOC103495622 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 235/255 (92.16%), Postives = 245/255 (96.08%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT QKFPA+SPPSSHS ADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAQKFPAKSPPSSHSLADGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FREESA S+GSFSTSKWVLPS+PNYRSVS DALNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREESANSSGSFSTSKWVLPSDPNYRSVSSDALNPLRAFLSLPQVTFGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQSENS+LASTANDLRTDKHTP+NPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF
Sbjct: 121 WELPQSENSILASTANDLRTDKHTPMNPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G T+SKLD++NASEIQTKGKSMIEPKMEMIR+Q VPFKVWA+DVSKKWHVERD DIKEKP
Sbjct: 181 GFTMSKLDVNNASEIQTKGKSMIEPKMEMIRQQFVPFKVWADDVSKKWHVERDNDIKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSKILGAKTPN
Sbjct: 241 LIKELSKILGAKTPN 255

[Close]

BLAST of ClCG02G002140.1 vs. ExPASy TrEMBL
Match: A0A0A0K240 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041920 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.9e-124
Identity = 229/255 (89.80%), Postives = 240/255 (94.12%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT  KFPAQSPPSSHS   GE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAHKFPAQSPPSSHSLPHGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPS  FREESA S+GSFSTSKWVLPS+PNYRSVS ++LNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSTIFREESANSSGSFSTSKWVLPSDPNYRSVSSNSLNPLRDFLSLPQVTFGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQSENS+LASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFA ATALVFGGATLIF
Sbjct: 121 WELPQSENSILASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAAATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G T+SKLD++NASEIQTKGK MIEPKMEMIR+QLVPFKVWA+D+SKKWHVERD DIKEKP
Sbjct: 181 GFTLSKLDVNNASEIQTKGKGMIEPKMEMIRQQLVPFKVWADDMSKKWHVERDNDIKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSKILGAKTPN
Sbjct: 241 LIKELSKILGAKTPN 255

[Close]

BLAST of ClCG02G002140.1 vs. ExPASy TrEMBL
Match: A0A6J1C1Z9 (uncharacterized protein LOC111007726 OS=Momordica charantia OX=3673 GN=LOC111007726 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.6e-122
Identity = 224/255 (87.84%), Postives = 239/255 (93.73%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHA+GRL QKNTTQKFPAQ PPSSHSPADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAIGRLVQKNTTQKFPAQPPPSSHSPADGELQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FRE+SA SNGS  TSKWVLPS+PN RSVS DALNPLR FL+LPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREQSADSNGSLVTSKWVLPSDPNRRSVSSDALNPLRAFLTLPQVTFGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQSENSVLASTANDLR DKHT INPEKLKAAAEGLAHVGKAFA+ATALVFGGATLIF
Sbjct: 121 WELPQSENSVLASTANDLRADKHTTINPEKLKAAAEGLAHVGKAFAIATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G T+SKLD++N++EIQTKG+++IEPKMEMIREQLVPFK WA D+SKKWHVERD+DIKEKP
Sbjct: 181 GFTVSKLDLNNSNEIQTKGRNLIEPKMEMIREQLVPFKTWAEDMSKKWHVERDKDIKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSK LGAKTPN
Sbjct: 241 LIKELSKTLGAKTPN 255

[Close]

BLAST of ClCG02G002140.1 vs. ExPASy TrEMBL
Match: A0A6J1I0D6 (uncharacterized protein LOC111468292 OS=Cucurbita maxima OX=3661 GN=LOC111468292 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.9e-117
Identity = 218/255 (85.49%), Postives = 237/255 (92.94%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLA KEAAYFIQESKHAVGRLA     QKFPAQ PPSS+S  DGESQADILPEV
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLA-----QKFPAQPPPSSNSTTDGESQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK +RE+SA S+GS STSKWVLPSNPNYRSVS D+LNPLR F+SLPQV+FGPKR
Sbjct: 61  LRHSLPSKIYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSFGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQS NSVLASTANDLRTDKHTPINPEKLKAAAEGLAH+GKAFAVATALVFGGATLIF
Sbjct: 121 WELPQSGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G+T+SKLD++NA+EIQTKGKSMIEP+M+MIREQLVPFKVWA+ +SKKWHVER++D KEKP
Sbjct: 181 GITMSKLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDTKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSK LGAKTPN
Sbjct: 241 LIKELSKTLGAKTPN 250

[Close]

BLAST of ClCG02G002140.1 vs. ExPASy TrEMBL
Match: A0A6J1GLK0 (uncharacterized protein LOC111455089 OS=Cucurbita moschata OX=3662 GN=LOC111455089 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116
Identity = 217/255 (85.10%), Postives = 237/255 (92.94%), Query Frame = 0


Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLA KEAAYFIQESKHAVGRLA     QKFPAQ PPSSHS  +GESQADILPEV
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLA-----QKFPAQPPPSSHSTTEGESQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPS F+RE+SA S+GS STSKWVLPSNPNYRSVS D+LNPLR F+SLPQV+ GPKR
Sbjct: 61  LRHSLPSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKR 120

Query: 121 WELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180
           WELPQS NSVLASTANDLRTDKHTPINPEKLKAAAEGLAH+GKAFAVATALVFGGATLIF
Sbjct: 121 WELPQSGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIF 180

Query: 181 GLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKP 240
           G+T+SKLD++NA+EIQTKGKSMIEP+M+MIREQLVPFKVWA+ +SKKWHVER++DIKEKP
Sbjct: 181 GITMSKLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKP 240

Query: 241 LIKELSKILGAKTPN 256
           LIKELSK LGA+TPN
Sbjct: 241 LIKELSKTLGARTPN 250

[Close]

BLAST of ClCG02G002140.1 vs. TAIR 10
Match: AT1G05060.1 (unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 291.2 bits (744), Expect = 8.1e-79
Identity = 159/261 (60.92%), Postives = 198/261 (75.86%), Query Frame = 0


Query: 1   MSFL-AGRLAGKEAAYFIQESKHAVGRLAQKN--TTQKFPAQSPPSSHSPADGESQADIL 60
           MSFL AGRLAGKEAAYF QESKHAV RLA+K+  T +K P+ SPP        E Q D+L
Sbjct: 1   MSFLGAGRLAGKEAAYFFQESKHAVNRLAEKSPATGKKLPS-SPPD-----PPEIQPDVL 60

Query: 61  PEVLRHSLPSKFF-REESAGSNGSFSTSKWVLPSNPNYR-SVSLDALNPLRGFLSLPQVT 120
           PE+LRHSLPSK + R     S   F  SKW L S+PN   S+S D LNPLRG++SLPQVT
Sbjct: 61  PEILRHSLPSKIYGRPPDPSSLSQF--SKWALESDPNATVSISPDVLNPLRGYVSLPQVT 120

Query: 121 FGPKRWELPQSENSVLASTANDLRTDKH-TPINPEKLKAAAEGLAHVGKAFAVATALVFG 180
           FG +RW+LP+SENSVLASTAN+LR D++ TP+NPEKLKAA EGL H+GKAFA AT ++FG
Sbjct: 121 FGRRRWDLPESENSVLASTANELRRDRYGTPVNPEKLKAAGEGLQHIGKAFAAATIIIFG 180

Query: 181 GATLIFGLTISKLDIDNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERD- 240
            ATL+FG   SKLD+ NA +I+TKGK + +PK+E ++EQ+ P + WA ++SKKWH+E + 
Sbjct: 181 SATLVFGTAASKLDMRNADDIRTKGKDLFQPKLESMKEQVEPLRTWAENMSKKWHIENEG 240

Query: 241 -EDIKEKPLIKELSKILGAKT 254
              IKEKP++KELSKILG K+
Sbjct: 241 GNTIKEKPILKELSKILGPKS 253

The following BLAST results are available for this feature:

BLAST of ClCG02G002140.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887935.1	3.3e-130	93.73	uncharacterized protein LOC120077905 [Benincasa hispida]	[more]
XP_008455465.1	2.6e-127	92.16	PREDICTED: uncharacterized protein LOC103495622 [Cucumis melo]	[more]
XP_004144510.1	1.0e-123	89.80	uncharacterized protein LOC101204303 [Cucumis sativus] >KGN43498.1 hypothetical ...	[more]
XP_022135886.1	3.3e-122	87.84	uncharacterized protein LOC111007726 [Momordica charantia]	[more]
XP_022969227.1	2.0e-116	85.49	uncharacterized protein LOC111468292 [Cucurbita maxima] >XP_022969228.1 uncharac...	[more]

BLAST of ClCG02G002140.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G002140.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0Z0	1.2e-127	92.16	uncharacterized protein LOC103495622 OS=Cucumis melo OX=3656 GN=LOC103495622 PE=...	[more]
A0A0A0K240	4.9e-124	89.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041920 PE=4 SV=1	[more]
A0A6J1C1Z9	1.6e-122	87.84	uncharacterized protein LOC111007726 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1I0D6	9.9e-117	85.49	uncharacterized protein LOC111468292 OS=Cucurbita maxima OX=3661 GN=LOC111468292...	[more]
A0A6J1GLK0	1.3e-116	85.10	uncharacterized protein LOC111455089 OS=Cucurbita moschata OX=3662 GN=LOC1114550...	[more]

BLAST of ClCG02G002140.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05060.1	8.1e-79	60.92	unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..50
None	No IPR available	PANTHER	PTHR36704:SF1	PROTEIN, PUTATIVE-RELATED	coord: 1..254
None	No IPR available	PANTHER	PTHR36704	PROTEIN, PUTATIVE-RELATED	coord: 1..254

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG02G002140	ClCG02G002140	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G002140.1-exon	ClCG02G002140.1-exon-CG_Chr02:2199102..2199460	exon
ClCG02G002140.1-exon	ClCG02G002140.1-exon-CG_Chr02:2200246..2200367	exon
ClCG02G002140.1-exon	ClCG02G002140.1-exon-CG_Chr02:2200439..2200530	exon
ClCG02G002140.1-exon	ClCG02G002140.1-exon-CG_Chr02:2200627..2200713	exon
ClCG02G002140.1-exon	ClCG02G002140.1-exon-CG_Chr02:2200829..2200936	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG02G002140.1-cds	ClCG02G002140.1-cds-CG_Chr02:2199102..2199460	CDS
ClCG02G002140.1-cds	ClCG02G002140.1-cds-CG_Chr02:2200246..2200367	CDS
ClCG02G002140.1-cds	ClCG02G002140.1-cds-CG_Chr02:2200439..2200530	CDS
ClCG02G002140.1-cds	ClCG02G002140.1-cds-CG_Chr02:2200627..2200713	CDS
ClCG02G002140.1-cds	ClCG02G002140.1-cds-CG_Chr02:2200829..2200936	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG02G002140.1	ClCG02G002140.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane