ClCG01G022670.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G022670.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr01: 36164385 .. 36165525 (+)
Sequence length246
RNA-Seq ExpressionClCG01G022670.1
SyntenyClCG01G022670.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTATGATAAACTTCAAATCAGCGTGCATCAAGGGTTAGCAACTCTATTTTCCCCTCGTAGGAATTGATCAAATCAGATGATCTTGATCAAATTTTTTTGCTAATTAGGAACTGGAAACAACCCTGATTTTTCCCCCTCAACTGTAAAGAAATAATATATAGCAATTTAAGAGGTGGCAAAATTGAGTGCATAACTGTCTTGGGAAATTTTCTGTACATAATTGTTATTGATTCTCAAACATTATTTATTTGAAATGGTTTGAAGTGCATCTGTTACGGACGTGATGCAATACAAGCAGGGAAACCCAAACACACAAGTATTGATACCAAAACAAAGGTATTCATTACCTGGTTTAGATGTTAGGTGCAGACACGAGTTCACATCAGCAAGTGTTGCTCATTAGGGGGTCTTAGTAAGTCAATTGTGCATGAACTGCCCAAGCCAATCTTGATGGTTGTGCTTAAGCTCCTGTTGATGTCGTAGAATGATGAAAATTATATGTAGTTGTAGCATCCGTTATTGAACTTTTATTAATTTGTAGCTTGAGAAGTATTCAAGAAACCAAATTGTTAAATGGGATGGGGGTTTGCTTTCTTCCTATTTCTACTGTACAGTTGATGTGAAACATGTTAGTAGATTGGAATCTTGATACGTTGGAATAAATGAAGTTAGGCATTTGTTAAGACTTTCTTACCATATGAGCGAGTGGTTTTATTTTATAGATATCAAGTTAAGTAGAGACATACTGCCCCAACTATCTCCTAATCAGCTTGATCATGAAGCACCAAGCTTACCTTTTCTGGTACAATCGAAGACTGATAACAATACTCATTTTGCATACTGTTGCCCCACCACTCCCCTAGCCCTTTTCCTAACCCTGACTTGTGATGCATATGAATTAGGAATTCAAATGGGGCCTCCAATTCTAATATATTCATTGTTATCATACATAACACATTGCTCAACATTCGGCGCATTAGTGACTTCCATTGCGTTCATTTGCATGTTGCATTGCATTTTCTACCTATATATTTTTTCCAGAGAATTCAAATTTCTTTTATTAGTAGATCATGATGATGAGCTACTATCAAATTTCTTTTATTAAACCATCTCAACTTTTGTGCACTGGTGCTTGA

mRNA sequence

ATGAATTATGATAAACTTCAAATCAGCGTGCATCAAGGTGCATCTGTTACGGACGTGATGCAATACAAGCAGGGAAACCCAAACACACAACTTGAGAAGTATTCAAGAAACCAAATTGTTAAATGGGATGGGGGTTTGCTTTCTTCCTATTTCTACTGTACAGTTGATGTGAAACATATCATGATGATGAGCTACTATCAAATTTCTTTTATTAAACCATCTCAACTTTTGTGCACTGGTGCTTGA

Coding sequence (CDS)

ATGAATTATGATAAACTTCAAATCAGCGTGCATCAAGGTGCATCTGTTACGGACGTGATGCAATACAAGCAGGGAAACCCAAACACACAACTTGAGAAGTATTCAAGAAACCAAATTGTTAAATGGGATGGGGGTTTGCTTTCTTCCTATTTCTACTGTACAGTTGATGTGAAACATATCATGATGATGAGCTACTATCAAATTTCTTTTATTAAACCATCTCAACTTTTGTGCACTGGTGCTTGA

Protein sequence

MNYDKLQISVHQGASVTDVMQYKQGNPNTQLEKYSRNQIVKWDGGLLSSYFYCTVDVKHIMMMSYYQISFIKPSQLLCTGA
Homology
The following BLAST results are available for this feature:
BLAST of ClCG01G022670.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G022670.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G022670.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G022670.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG01G022670ClCG01G022670gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG01G022670.1-exonClCG01G022670.1-exon-CG_Chr01:36164385..36164422exon
ClCG01G022670.1-exonClCG01G022670.1-exon-CG_Chr01:36164654..36164705exon
ClCG01G022670.1-exonClCG01G022670.1-exon-CG_Chr01:36164931..36165017exon
ClCG01G022670.1-exonClCG01G022670.1-exon-CG_Chr01:36165457..36165525exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG01G022670.1-cdsClCG01G022670.1-cds-CG_Chr01:36164385..36164422CDS
ClCG01G022670.1-cdsClCG01G022670.1-cds-CG_Chr01:36164654..36164705CDS
ClCG01G022670.1-cdsClCG01G022670.1-cds-CG_Chr01:36164931..36165017CDS
ClCG01G022670.1-cdsClCG01G022670.1-cds-CG_Chr01:36165457..36165525CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG01G022670.1ClCG01G022670.1-proteinpolypeptide