ClCG01G011680.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G011680.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr01: 19565956 .. 19566739 (+)
Sequence length498
RNA-Seq ExpressionClCG01G011680.1
SyntenyClCG01G011680.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATACTTGAAGCTTTTAATTGGCACATTGTCCTTCCAAACGGCTCATTGAATTGGTCCAATATGCTCCTCATTGATCACCCTTTCAAGAATGCTAAAGAGACTTTATGGACAAGCATTGTGGTTGCTGTTTTTGGAAGATATGGGACGAGAGAAACGCTCAAAATTTTCAGAACAAATCCAAATCATCCGGAGATGTTCTTGAATCTGCTATCTTCAATGCAATCTTTTGGTGTAAATCTTTACCAGCATTTCAAAGCCACAGTTTTTCTTTTCTCGTTAAAAATTGGAAACATCTTTTGTTTGCCCTATAAAAGGGGCTCTTTTTATATATCCTTGGATATTTCATTTGATCAATGAAATTGTTTCTTATCCAGAAAAAATCCAATCCGAATCCATCTAGGCACTAGACAGAAAGATTTTTAATGGTTATGCCGAATCTGGAAGGACTTAAACTGAATCACAGAGGTTCGAAAATTACACTGAAATTGTACCGCCAATGAAGGGGCAGAAAATCAAATCGAAGAGATGAAGCAGAAAAAGATTGCAGGCAAGAATGAAGAAGCAGGATAGAGCTCAGACAGATTTAGTCATGAAGTCGATTGAGGATGAAATTCGAGTGAGAAATCGGATGAAATCTGACAAGATAGAATGGGAAAAGGGATTCCGGGAAGCAATTGTACAGCCAAAACCCATAGTGGAGCGAAATCGGGTTCAATGGCCGATCAAAAACATAAGAATGCATTGGAAGACAAAGATGGGAATGGAGAAGAATACCTGA

mRNA sequence

ATGAAAATACTTGAAGCTTTTAATTGGCACATTGTCCTTCCAAACGGCTCATTGAATTGGTCCAATATGCTCCTCATTGATCACCCTTTCAAGAATGCTAAAGAGACTTTATGGACAAGCATTGTGGTTGCTGTTTTTGGAAGATATGGGACGAGAGAAACGCTCAAAATTTTCAGAACAAATCCAAATCATCCGGAGATGTTCTTGAATCTGCTATCTTCAATGCAATCTTTTGGTGTAAATCTTTACCAGCATTTCAAAGCCACAGCAAGAATGAAGAAGCAGGATAGAGCTCAGACAGATTTAGTCATGAAGTCGATTGAGGATGAAATTCGAGTGAGAAATCGGATGAAATCTGACAAGATAGAATGGGAAAAGGGATTCCGGGAAGCAATTGTACAGCCAAAACCCATAGTGGAGCGAAATCGGGTTCAATGGCCGATCAAAAACATAAGAATGCATTGGAAGACAAAGATGGGAATGGAGAAGAATACCTGA

Coding sequence (CDS)

ATGAAAATACTTGAAGCTTTTAATTGGCACATTGTCCTTCCAAACGGCTCATTGAATTGGTCCAATATGCTCCTCATTGATCACCCTTTCAAGAATGCTAAAGAGACTTTATGGACAAGCATTGTGGTTGCTGTTTTTGGAAGATATGGGACGAGAGAAACGCTCAAAATTTTCAGAACAAATCCAAATCATCCGGAGATGTTCTTGAATCTGCTATCTTCAATGCAATCTTTTGGTGTAAATCTTTACCAGCATTTCAAAGCCACAGCAAGAATGAAGAAGCAGGATAGAGCTCAGACAGATTTAGTCATGAAGTCGATTGAGGATGAAATTCGAGTGAGAAATCGGATGAAATCTGACAAGATAGAATGGGAAAAGGGATTCCGGGAAGCAATTGTACAGCCAAAACCCATAGTGGAGCGAAATCGGGTTCAATGGCCGATCAAAAACATAAGAATGCATTGGAAGACAAAGATGGGAATGGAGAAGAATACCTGA

Protein sequence

MKILEAFNWHIVLPNGSLNWSNMLLIDHPFKNAKETLWTSIVVAVFGRYGTRETLKIFRTNPNHPEMFLNLLSSMQSFGVNLYQHFKATARMKKQDRAQTDLVMKSIEDEIRVRNRMKSDKIEWEKGFREAIVQPKPIVERNRVQWPIKNIRMHWKTKMGMEKNT
Homology
The following BLAST results are available for this feature:
BLAST of ClCG01G011680.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G011680.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G011680.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G011680.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG01G011680ClCG01G011680gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG01G011680.1-exonClCG01G011680.1-exon-CG_Chr01:19565956..19566222exon
ClCG01G011680.1-exonClCG01G011680.1-exon-CG_Chr01:19566509..19566739exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG01G011680.1-cdsClCG01G011680.1-cds-CG_Chr01:19565956..19566222CDS
ClCG01G011680.1-cdsClCG01G011680.1-cds-CG_Chr01:19566509..19566739CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG01G011680.1ClCG01G011680.1-proteinpolypeptide