Chy9G168360.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy9G168360.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	NAC domain-containing protein
Location	chrH09: 13466418 .. 13467697 (-)
Sequence length	552
RNA-Seq Expression	Chy9G168360.1
Synteny	Chy9G168360.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATGCTACTCCTCAGGTAAACTTCATTAAACTCACTCATACAGGAGGTTTGTTGGCCAAATATCAGATACCCAATTATATTAGACACATTTAGGTTGAATGTCATGACCGTCATGTATCTAACACACTATATAACGTTTGTTGGACATAGATCGGATATATACTTGTTAAGTCATATAGTAGTGTGTCAATCAAACACTTTGATTTGTTATGGAACAGATAATGTTGGTATTTGTTTACATAAAATAGAATTTTTTTACAATATACAAGAGGTAAGAAGAAATAATAGGACCATCCTAATATATTTCTTTTCTTACGCAATTTTTTTCACCCACATTTATAATTGCGTATGAAATAAGTATATATATAAAGAAATAAAGTTTGAGAGTGAAAACTCATCAAGTTCATTTGTTCTTTTATCTAAGTATATTTACTACTTTTTCTAGCATAAATAATACTTACCAGGTTCACGTGTTTTTAATCTAAAAAAAATGTTCTCATCAGTATCGGATTCGCATCTATATAATTTCTTTCATTTTCATAAACATATAATCGAGGATGGAAGATTGGAAAAGAAAGAAGAGAAATTATAAACATACCCTAGTATGTGTAATACACAATATAAATGGAAACATCAGAAATCAAGCATTATTATTACTTAGGTAAGAAAAATGTTATTATTCTAACATGGCTTCAACAAAATTGTCATTGTATATACCAGGAAGAAGGATGGGTTGTTTGCAGGGTTTTCAAGAAGAGGATGCCGACGGTGAGAAAAGCCGGTGACTATGGCTCACCGTGCTGGTACGACGACCAAGTCTCCTTCATGCCAGAGCTTGATTCTCCAACCACCCAAATCTTTCACCACCCAGCTTATCCTTGCAAGCAAGAGCTTGAGTTGCACTTCCATGCCCCACCACACGACCAGGTTTTCCTCCAACTCCCTCACCTCGAAAGTCCAAAAATCCCCACATCTTCAGCCACCAACTCTCTGCTCCCTTACGCCTATGACCGAGACACTGGCGTCGCTCCGCTTTACGGCGTCGAGCACACCGTGGATCACGTGACCGACTGGAGAGTAATGGAAAAATTTGTTGCTTCTCAACTCAGCAATGATCAAGATTTGAAGCAATCCAACTATTCTCATGGAGCTATTTTTCAAGTGCCGCCCAACTCAGGTGGTGCTGCCACCGTGTCGGACTGTGATCGTAAAGATATGGCGCCGGAGTTTGCACTGGCATCCCCATCAAGTTGCCAAGTGGATATGTGGAAGTGA

mRNA sequence

ATGAAAATGCTACTCCTCAGGGTTTTCAAGAAGAGGATGCCGACGGTGAGAAAAGCCGGTGACTATGGCTCACCGTGCTGGTACGACGACCAAGTCTCCTTCATGCCAGAGCTTGATTCTCCAACCACCCAAATCTTTCACCACCCAGCTTATCCTTGCAAGCAAGAGCTTGAGTTGCACTTCCATGCCCCACCACACGACCAGGTTTTCCTCCAACTCCCTCACCTCGAAAGTCCAAAAATCCCCACATCTTCAGCCACCAACTCTCTGCTCCCTTACGCCTATGACCGAGACACTGGCGTCGCTCCGCTTTACGGCGTCGAGCACACCGTGGATCACGTGACCGACTGGAGAGTAATGGAAAAATTTGTTGCTTCTCAACTCAGCAATGATCAAGATTTGAAGCAATCCAACTATTCTCATGGAGCTATTTTTCAAGTGCCGCCCAACTCAGGTGGTGCTGCCACCGTGTCGGACTGTGATCGTAAAGATATGGCGCCGGAGTTTGCACTGGCATCCCCATCAAGTTGCCAAGTGGATATGTGGAAGTGA

Coding sequence (CDS)

ATGAAAATGCTACTCCTCAGGGTTTTCAAGAAGAGGATGCCGACGGTGAGAAAAGCCGGTGACTATGGCTCACCGTGCTGGTACGACGACCAAGTCTCCTTCATGCCAGAGCTTGATTCTCCAACCACCCAAATCTTTCACCACCCAGCTTATCCTTGCAAGCAAGAGCTTGAGTTGCACTTCCATGCCCCACCACACGACCAGGTTTTCCTCCAACTCCCTCACCTCGAAAGTCCAAAAATCCCCACATCTTCAGCCACCAACTCTCTGCTCCCTTACGCCTATGACCGAGACACTGGCGTCGCTCCGCTTTACGGCGTCGAGCACACCGTGGATCACGTGACCGACTGGAGAGTAATGGAAAAATTTGTTGCTTCTCAACTCAGCAATGATCAAGATTTGAAGCAATCCAACTATTCTCATGGAGCTATTTTTCAAGTGCCGCCCAACTCAGGTGGTGCTGCCACCGTGTCGGACTGTGATCGTAAAGATATGGCGCCGGAGTTTGCACTGGCATCCCCATCAAGTTGCCAAGTGGATATGTGGAAGTGA

Protein sequence

MKMLLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHAPPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVMEKFVASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDMWK*

Homology

[Close]

BLAST of Chy9G168360.1 vs. ExPASy Swiss-Prot
Match: Q9FWX2 (NAC domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=NAC007 PE=1 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 80/251 (31.87%), Postives = 113/251 (45.02%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGS--PCWYDDQVSFM-PELD--------------------- 63
           ++ RVFKKR+  VR+ GDY S    WYDDQ+SFM  EL+                     
Sbjct: 149 VVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLSFMASELETNGQRRILPNHHQQQQHEHQQ 208

Query: 64  ------SPTTQIFHHPAYPCKQELELHF-HAPPHDQV-------FLQLPHLESPKIPTSS 123
                 + +    ++P   CKQELELH+ H    + +       FLQLP LESPKI   +
Sbjct: 209 HMPYGLNASAYALNNPNLQCKQELELHYNHLVQRNHLLDESHLSFLQLPQLESPKIQQDN 268

Query: 124 ATNSLLPYAYDR-------------------------DTGVAPLY---GVEHTVDHVTDW 183
           +  + LPY                             +   + LY   G E  +D VTDW
Sbjct: 269 SNCNSLPYGTSNIDNNSSHNANLQQSNIAHEEQLNQGNQNFSSLYMNSGNEQVMDQVTDW 328

[Close]

BLAST of Chy9G168360.1 vs. ExPASy Swiss-Prot
Match: F4HYV5 (NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 81/246 (32.93%), Postives = 114/246 (46.34%), Query Frame = 0


Query: 4   LLLRVFKKRM-PTVRKAGDY-GSPC--WYDDQVSFM-PELDSPTTQIF---------HH- 63
           ++ RVFKK++  TVRK GDY  SP   WYDDQ+SFM  E+ S + + F         HH 
Sbjct: 149 VVCRVFKKKLAATVRKMGDYHSSPSQHWYDDQLSFMASEIISSSPRQFLPNHHYNRHHHQ 208

Query: 64  --------------PAYPCKQELELHFHAPPHDQ---------VFLQLPHLESPKIPTSS 123
                         P   CKQELELH++     Q         +FLQLP LESP    +S
Sbjct: 209 QTLPCGLNAFNNNNPNLQCKQELELHYNQMVQHQQQNHHLRESMFLQLPQLESPTSNCNS 268

Query: 124 ATN------------SLLPYAYDRDTG---VAPLYGVEHTVDHVTDWRVMEKFVASQLSN 182
             N            S + +      G    + LY  +      TDWRV++KFVASQLSN
Sbjct: 269 DNNNNTRNISNLQKSSNISHEEQLQQGNQSFSSLYYDQGVEQMTTDWRVLDKFVASQLSN 328

[Close]

BLAST of Chy9G168360.1 vs. ExPASy TrEMBL
Match: A0A0A0KKJ4 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G160180 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 9.4e-101
Identity = 175/180 (97.22%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVMEKF 123
           PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGV PLYGVEHTVDHVTDWRVMEKF
Sbjct: 210 PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGVTPLYGVEHTVDHVTDWRVMEKF 269

Query: 124 VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDMWK 183
           VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVS+CDRKDMAPEFALASPSSCQVDMWK
Sbjct: 270 VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSECDRKDMAPEFALASPSSCQVDMWK 329

[Close]

BLAST of Chy9G168360.1 vs. ExPASy TrEMBL
Match: A0A5A7T883 (NAC domain-containing protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00130 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.1e-99
Identity = 172/180 (95.56%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVMEKF 123
           PPHDQVFLQLPHLESPKIPTSS TNSLLPYAYDRDTGV PLYGVEHTVDHVTDWRVMEKF
Sbjct: 210 PPHDQVFLQLPHLESPKIPTSSTTNSLLPYAYDRDTGVTPLYGVEHTVDHVTDWRVMEKF 269

Query: 124 VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDMWK 183
           VASQLSNDQDLKQ NYSHGAIFQVPPNSGGAAT S+CDRKDMAPEFALASPSSCQVDMWK
Sbjct: 270 VASQLSNDQDLKQPNYSHGAIFQVPPNSGGAATPSECDRKDMAPEFALASPSSCQVDMWK 329

[Close]

BLAST of Chy9G168360.1 vs. ExPASy TrEMBL
Match: A0A1S3AT91 (NAC domain-containing protein 7-like OS=Cucumis melo OX=3656 GN=LOC103482644 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.1e-99
Identity = 172/180 (95.56%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVMEKF 123
           PPHDQVFLQLPHLESPKIPTSS TNSLLPYAYDRDTGV PLYGVEHTVDHVTDWRVMEKF
Sbjct: 210 PPHDQVFLQLPHLESPKIPTSSTTNSLLPYAYDRDTGVTPLYGVEHTVDHVTDWRVMEKF 269

Query: 124 VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDMWK 183
           VASQLSNDQDLKQ NYSHGAIFQVPPNSGGAAT S+CDRKDMAPEFALASPSSCQVDMWK
Sbjct: 270 VASQLSNDQDLKQPNYSHGAIFQVPPNSGGAATPSECDRKDMAPEFALASPSSCQVDMWK 329

[Close]

BLAST of Chy9G168360.1 vs. ExPASy TrEMBL
Match: A0A6J1H3G9 (NAC domain-containing protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111459314 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.5e-82
Identity = 148/182 (81.32%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRK GDYGSPCWYDDQVSFMPEL+SPT QIF HP+YPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKGGDYGSPCWYDDQVSFMPELESPTNQIFRHPSYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSS--ATNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVME 123
           PPHD VFLQLPHLESPK+P SS    NSLLPYAYDRDT +APLYG+EH +DHVTDWRVME
Sbjct: 210 PPHDPVFLQLPHLESPKLPPSSVPTANSLLPYAYDRDTALAPLYGMEHAMDHVTDWRVME 269

Query: 124 KFVASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDM 183
           KFVASQLSNDQDLKQ NYS GAIFQVPP+S GA    +C+ KD+APEFA ASPSS QVDM
Sbjct: 270 KFVASQLSNDQDLKQPNYSDGAIFQVPPSSAGA----ECEHKDIAPEFARASPSSHQVDM 327

[Close]

BLAST of Chy9G168360.1 vs. ExPASy TrEMBL
Match: A0A6J1K171 (NAC domain-containing protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111491482 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.3e-81
Identity = 147/182 (80.77%), Postives = 158/182 (86.81%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRK GDYGSPCWYDDQVSFMPELDSPTTQIF HP+YPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKGGDYGSPCWYDDQVSFMPELDSPTTQIFRHPSYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSS--ATNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVME 123
           PPHD VFLQLPHLESPK+P SS    NSLLPYAYDRDT +APLYG+EH VDH+TDWRVME
Sbjct: 210 PPHDPVFLQLPHLESPKLPPSSVPTANSLLPYAYDRDTALAPLYGMEHAVDHMTDWRVME 269

Query: 124 KFVASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDM 183
           KFVASQLSNDQDLKQ NYS GAIFQVP +S G     +C+ KD+ PEFA ASPSS QVDM
Sbjct: 270 KFVASQLSNDQDLKQPNYSDGAIFQVPQSSAG----PECEHKDITPEFARASPSSHQVDM 327

[Close]

BLAST of Chy9G168360.1 vs. NCBI nr
Match: XP_004147614.1 (NAC domain-containing protein 7 [Cucumis sativus] >KGN50215.1 hypothetical protein Csa_000651 [Cucumis sativus])

HSP 1 Score: 376 bits (966), Expect = 1.78e-129
Identity = 175/180 (97.22%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVMEKF 123
           PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGV PLYGVEHTVDHVTDWRVMEKF
Sbjct: 210 PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGVTPLYGVEHTVDHVTDWRVMEKF 269

Query: 124 VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDMWK 183
           VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVS+CDRKDMAPEFALASPSSCQVDMWK
Sbjct: 270 VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSECDRKDMAPEFALASPSSCQVDMWK 329

[Close]

BLAST of Chy9G168360.1 vs. NCBI nr
Match: XP_008437130.1 (PREDICTED: NAC domain-containing protein 7-like [Cucumis melo] >KAA0039682.1 NAC domain-containing protein 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 370 bits (951), Expect = 3.41e-127
Identity = 172/180 (95.56%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVMEKF 123
           PPHDQVFLQLPHLESPKIPTSS TNSLLPYAYDRDTGV PLYGVEHTVDHVTDWRVMEKF
Sbjct: 210 PPHDQVFLQLPHLESPKIPTSSTTNSLLPYAYDRDTGVTPLYGVEHTVDHVTDWRVMEKF 269

Query: 124 VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDMWK 183
           VASQLSNDQDLKQ NYSHGAIFQVPPNSGGAAT S+CDRKDMAPEFALASPSSCQVDMWK
Sbjct: 270 VASQLSNDQDLKQPNYSHGAIFQVPPNSGGAATPSECDRKDMAPEFALASPSSCQVDMWK 329

[Close]

BLAST of Chy9G168360.1 vs. NCBI nr
Match: XP_038907060.1 (NAC domain-containing protein 7-like [Benincasa hispida])

HSP 1 Score: 348 bits (893), Expect = 2.26e-118
Identity = 161/180 (89.44%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHP YPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPPYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSSATNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVMEKF 123
           P HD  FLQLPHLESPKIPTSSA NSLLPY YDRDTG+ PLYGVEH VDHVTDWRVMEKF
Sbjct: 210 PLHDPAFLQLPHLESPKIPTSSAANSLLPYTYDRDTGITPLYGVEHAVDHVTDWRVMEKF 269

Query: 124 VASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDMWK 183
           VASQLSNDQDLKQSNYSHGAIFQVPP+SG  AT+S+ +RKDMAPEFALASPSSCQVDMWK
Sbjct: 270 VASQLSNDQDLKQSNYSHGAIFQVPPSSGSTATMSEYERKDMAPEFALASPSSCQVDMWK 329

[Close]

BLAST of Chy9G168360.1 vs. NCBI nr
Match: XP_023533848.1 (NAC domain-containing protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318 bits (815), Expect = 1.52e-106
Identity = 151/182 (82.97%), Postives = 161/182 (88.46%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRK GDYGSPCWYDDQVSFMPELDSPTTQIF HP+YPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKGGDYGSPCWYDDQVSFMPELDSPTTQIFRHPSYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSSA--TNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVME 123
           PPHD VFLQLPHLESPK+P SS    NSLLPYAYDRDT +APLYG+EHT+DHVTDWRVME
Sbjct: 210 PPHDPVFLQLPHLESPKLPPSSVPTANSLLPYAYDRDTALAPLYGMEHTMDHVTDWRVME 269

Query: 124 KFVASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDM 183
           KFVASQLSNDQDLKQ NYS GAIFQVPP+S G     +CD KD+APEFA ASPSS QVDM
Sbjct: 270 KFVASQLSNDQDLKQPNYSDGAIFQVPPSSAGP----ECDHKDIAPEFARASPSSHQVDM 327

[Close]

BLAST of Chy9G168360.1 vs. NCBI nr
Match: KAG6606165.1 (NAC domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313 bits (803), Expect = 1.01e-104
Identity = 148/182 (81.32%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPAYPCKQELELHFHA 63
           ++ RVFKKRMPTVRK GDYGSPCWYDDQVSFMPELDSPT QIF HP+YPCKQELELHFHA
Sbjct: 150 VVCRVFKKRMPTVRKGGDYGSPCWYDDQVSFMPELDSPTNQIFRHPSYPCKQELELHFHA 209

Query: 64  PPHDQVFLQLPHLESPKIPTSSA--TNSLLPYAYDRDTGVAPLYGVEHTVDHVTDWRVME 123
           PPHD VFLQLPHLESPK+P SS    NSLLPYAYDRDT +APLYG+EH +DHVTDWRVME
Sbjct: 210 PPHDPVFLQLPHLESPKLPPSSVPTANSLLPYAYDRDTALAPLYGMEHAMDHVTDWRVME 269

Query: 124 KFVASQLSNDQDLKQSNYSHGAIFQVPPNSGGAATVSDCDRKDMAPEFALASPSSCQVDM 183
           KFVASQLSNDQDLKQ NYS GAIF+VPP+S GA    +C+ KD+APEFA ASPSS QVDM
Sbjct: 270 KFVASQLSNDQDLKQPNYSDGAIFEVPPSSAGA----ECEHKDIAPEFARASPSSHQVDM 327

[Close]

BLAST of Chy9G168360.1 vs. TAIR 10
Match: AT1G12260.1 (NAC 007 )

HSP 1 Score: 101.3 bits (251), Expect = 8.6e-22
Identity = 80/251 (31.87%), Postives = 113/251 (45.02%), Query Frame = 0


Query: 4   LLLRVFKKRMPTVRKAGDYGS--PCWYDDQVSFM-PELD--------------------- 63
           ++ RVFKKR+  VR+ GDY S    WYDDQ+SFM  EL+                     
Sbjct: 149 VVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLSFMASELETNGQRRILPNHHQQQQHEHQQ 208

Query: 64  ------SPTTQIFHHPAYPCKQELELHF-HAPPHDQV-------FLQLPHLESPKIPTSS 123
                 + +    ++P   CKQELELH+ H    + +       FLQLP LESPKI   +
Sbjct: 209 HMPYGLNASAYALNNPNLQCKQELELHYNHLVQRNHLLDESHLSFLQLPQLESPKIQQDN 268

Query: 124 ATNSLLPYAYDR-------------------------DTGVAPLY---GVEHTVDHVTDW 183
           +  + LPY                             +   + LY   G E  +D VTDW
Sbjct: 269 SNCNSLPYGTSNIDNNSSHNANLQQSNIAHEEQLNQGNQNFSSLYMNSGNEQVMDQVTDW 328

[Close]

BLAST of Chy9G168360.1 vs. TAIR 10
Match: AT1G62700.1 (Arabidopsis NAC domain containing protein 26 )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 81/246 (32.93%), Postives = 114/246 (46.34%), Query Frame = 0


Query: 4   LLLRVFKKRM-PTVRKAGDY-GSPC--WYDDQVSFM-PELDSPTTQIF---------HH- 63
           ++ RVFKK++  TVRK GDY  SP   WYDDQ+SFM  E+ S + + F         HH 
Sbjct: 149 VVCRVFKKKLAATVRKMGDYHSSPSQHWYDDQLSFMASEIISSSPRQFLPNHHYNRHHHQ 208

Query: 64  --------------PAYPCKQELELHFHAPPHDQ---------VFLQLPHLESPKIPTSS 123
                         P   CKQELELH++     Q         +FLQLP LESP    +S
Sbjct: 209 QTLPCGLNAFNNNNPNLQCKQELELHYNQMVQHQQQNHHLRESMFLQLPQLESPTSNCNS 268

Query: 124 ATN------------SLLPYAYDRDTG---VAPLYGVEHTVDHVTDWRVMEKFVASQLSN 182
             N            S + +      G    + LY  +      TDWRV++KFVASQLSN
Sbjct: 269 DNNNNTRNISNLQKSSNISHEEQLQQGNQSFSSLYYDQGVEQMTTDWRVLDKFVASQLSN 328

[Close]

BLAST of Chy9G168360.1 vs. TAIR 10
Match: AT4G36160.1 (NAC domain containing protein 76 )

HSP 1 Score: 44.7 bits (104), Expect = 9.5e-05
Identity = 43/163 (26.38%), Postives = 68/163 (41.72%), Query Frame = 0


Query: 4   LLLRVFKKRMPT--VRKAGDYGSPCWYDDQVSFMPELDSPTTQIFHHPA------YPCKQ 63
           ++ R FKK+  T   +    + S  +YD+  S +  +  P   +              KQ
Sbjct: 152 VVCRAFKKKPMTGQAKNTETWSSSYFYDELPSGVRSVTEPLNYVSKQKQNVFAQDLMFKQ 211

Query: 64  ELE-----LHFHAPPHDQVFLQLPHLESPKIPTSSATNSLLPY-AYDRDTGVAPLYGVEH 123
           ELE     L+F    H   F+QLP LESP +P +    SL    + +++  +   + +E 
Sbjct: 212 ELEGSDIGLNF---IHCDQFIQLPQLESPSLPLTKRPVSLTSITSLEKNKNIYKRHLIEE 271

Query: 124 TVDH-------------------VTDWRVMEKFVASQLSNDQD 134
            V                      TDWR ++KFVASQL + +D
Sbjct: 272 DVSFNALISSGNKDKKKKKTSVMTTDWRALDKFVASQLMSQED 311

The following BLAST results are available for this feature:

BLAST of Chy9G168360.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FWX2	1.2e-20	31.87	NAC domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=NAC007 PE=1 S...	[more]
F4HYV5	2.0e-15	32.93	NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 ...	[more]

BLAST of Chy9G168360.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKJ4	9.4e-101	97.22	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G160180 PE=4 SV...	[more]
A0A5A7T883	5.1e-99	95.56	NAC domain-containing protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3AT91	5.1e-99	95.56	NAC domain-containing protein 7-like OS=Cucumis melo OX=3656 GN=LOC103482644 PE=...	[more]
A0A6J1H3G9	7.5e-82	81.32	NAC domain-containing protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC1114593...	[more]
A0A6J1K171	8.3e-81	80.77	NAC domain-containing protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111491482...	[more]

BLAST of Chy9G168360.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147614.1	1.78e-129	97.22	NAC domain-containing protein 7 [Cucumis sativus] >KGN50215.1 hypothetical prote...	[more]
XP_008437130.1	3.41e-127	95.56	PREDICTED: NAC domain-containing protein 7-like [Cucumis melo] >KAA0039682.1 NAC...	[more]
XP_038907060.1	2.26e-118	89.44	NAC domain-containing protein 7-like [Benincasa hispida]	[more]
XP_023533848.1	1.52e-106	82.97	NAC domain-containing protein 7-like [Cucurbita pepo subsp. pepo]	[more]
KAG6606165.1	1.01e-104	81.32	NAC domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Chy9G168360.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12260.1	8.6e-22	31.87	NAC 007	[more]
AT1G62700.1	1.4e-16	32.93	Arabidopsis NAC domain containing protein 26	[more]
AT4G36160.1	9.5e-05	26.38	NAC domain containing protein 76	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31989:SF381	NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN-RELATED	coord: 6..166
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 6..166

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy9G168360	Chy9G168360	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy9G168360.1.exon2	Chy9G168360.1.exon2	exon
Chy9G168360.1.exon1	Chy9G168360.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy9G168360.1.cds2	Chy9G168360.1.cds2	CDS
Chy9G168360.1.cds1	Chy9G168360.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy9G168360.1	Chy9G168360.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding