Chy8G152750.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy8G152750.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	transcription termination/antitermination protein NusG
Location	chrH08: 14576047 .. 14577937 (-)
Sequence length	981
RNA-Seq Expression	Chy8G152750.1
Synteny	Chy8G152750.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTGTGGGCTTCTGCTTTGGAGCCCAGTTTCCCTTTGCTCTACCTCTTTCCCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACACAATTATCAATCTCCGCCTCCGTCGAAACCACCGCCGCCGCCGCTGACGATGTTCAGCAGCTGTCGGTAAGGGAGCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATTAAAACCACCACCAATTGGAGGGAAGAAGTAGAGGAGAGGCTCTGCAGGAAGCCCAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAACCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTTGCTCGTGTTCGAAGTCAAGAAATTGTCGAACGCCTTGCTCGTTCTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGGTGAAATTTCTTCATTCCACTGTTTGGATTCTGGGTCTGTGGCACAAATTGTATGGATTTTGTTGTGTTGGTTTTGAAATTCATTAACAGAATCCAATATATGAAAATCTACTGAATTTCATTGTTTGGGAACTTGAGGGAATGCTTAAATGCTTCTGTAAACATAAATGTATATGTATATTTCATTAGCTTGATTATCTTGCAATGTAGTACTTAGATTGGAGAATAAAGGATTTGAAACAACAGCTAAAAGATTAAATAATGACTTTTTTCTTTCAATTTTACATAAGTTGCCAAAGAAACAAAGGTTATCTAAAAAGGAATGAAGAAATGGGATTTATTTTTTTAGTTGCTACAAACGGTAGAGACGATAATGTGTATCAACGTCTCAAGTCTTCAGTTGGATTGCAGATATATTACCCGTCGGTTAAGGAGAAGAGGAAATTAAAGAATGGTACTTACACCGTTACACCAAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGTGCGAAGGTCGGAAACACGTGAGTCTTTATTTTGTTTTCTTCTTTGTAAAGTCAGTTTAGCAATTATTTGTTCTCTGGGAACACTCTACTTGAAATTACTTGAGACTCCTGACAGGAAATGAGAGAACTGCATTGGTCCTTTGGGATTATGTAATTTGTATTTCTTGTAGTCTATAGATTCTGGGGTCTAGGAGGTCATGGCACAGAACTGATTCATAACTTGATCTGGATTTCAAAACTAGGAATAATTTTAGATTCAAAATTCAGATTTTTATACTAAGATCGACAGTAACTTTCATCTGAAATTTTAGATATAGAAGCTGTATATTTCTCTATGTCAATTATGTGTTCTCAGTCAGTCTGTTGTTCTGATATAGTTTTGGCAATATGCAGTAAACGACAGATAAACAAACCAAAGCCAGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAAGCAAAGGATGAGCAAGAAAGACACGACCAGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAACTCTAGCGCACTCAAAACTGACTTAGATACAAATGGTACTACTGCTACGAAGCACAAAGGAAGACCCAAAAAAGCTGTTAATACCTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCGGGTACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTATGCTGTTTTCTTTTAGATGAAGAGTTTGCTACAAAGAGAATAATTAGAAGAAAGTTGTGTCCTTGAGAGACCAGAGGGCTTGTTGGAAATCTATTAACCATAATTGATTTCCTTCGTGCAGGTAACTGTGGGATTTACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATCGGTGATATTATACTAGAGACAAAATGA

mRNA sequence

ATGGCCTGTGGGCTTCTGCTTTGGAGCCCAGTTTCCCTTTGCTCTACCTCTTTCCCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACACAATTATCAATCTCCGCCTCCGTCGAAACCACCGCCGCCGCCGCTGACGATGTTCAGCAGCTGTCGGTAAGGGAGCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATTAAAACCACCACCAATTGGAGGGAAGAAGTAGAGGAGAGGCTCTGCAGGAAGCCCAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAACCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTTGCTCGTGTTCGAAGTCAAGAAATTGTCGAACGCCTTGCTCGTTCTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGATATATTACCCGTCGGTTAAGGAGAAGAGGAAATTAAAGAATGGTACTTACACCGTTACACCAAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGTGCGAAGGTCGGAAACACTAAACGACAGATAAACAAACCAAAGCCAGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAAGCAAAGGATGAGCAAGAAAGACACGACCAGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAACTCTAGCGCACTCAAAACTGACTTAGATACAAATGGTACTACTGCTACGAAGCACAAAGGAAGACCCAAAAAAGCTGTTAATACCTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCGGGTACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTAACTGTGGGATTTACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATCGGTGATATTATACTAGAGACAAAATGA

Coding sequence (CDS)

ATGGCCTGTGGGCTTCTGCTTTGGAGCCCAGTTTCCCTTTGCTCTACCTCTTTCCCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACACAATTATCAATCTCCGCCTCCGTCGAAACCACCGCCGCCGCCGCTGACGATGTTCAGCAGCTGTCGGTAAGGGAGCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATTAAAACCACCACCAATTGGAGGGAAGAAGTAGAGGAGAGGCTCTGCAGGAAGCCCAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAACCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTTGCTCGTGTTCGAAGTCAAGAAATTGTCGAACGCCTTGCTCGTTCTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGATATATTACCCGTCGGTTAAGGAGAAGAGGAAATTAAAGAATGGTACTTACACCGTTACACCAAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGTGCGAAGGTCGGAAACACTAAACGACAGATAAACAAACCAAAGCCAGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAAGCAAAGGATGAGCAAGAAAGACACGACCAGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAACTCTAGCGCACTCAAAACTGACTTAGATACAAATGGTACTACTGCTACGAAGCACAAAGGAAGACCCAAAAAAGCTGTTAATACCTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCGGGTACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTAACTGTGGGATTTACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATCGGTGATATTATACTAGAGACAAAATGA

Protein sequence

MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIILETK*

Homology

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BLAST of Chy8G152750.1 vs. ExPASy Swiss-Prot
Match: Q06795 (Transcription termination/antitermination protein NusG OS=Bacillus subtilis (strain 168) OX=224308 GN=nusG PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 55/215 (25.58%), Postives = 87/215 (40.47%), Query Frame = 0


Query: 108 WWVMRVARVRSQEIVERLARSL-ARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPG 167
           W+V+        ++   L + + +    D  F++  P  +E+  +KNG   V  K VFPG
Sbjct: 5   WYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPE-EEETDIKNGKKKVVKKKVFPG 64

Query: 168 SVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQE 227
            V +  VM  +    +R   GV GFVG+         +KP P+   + E I K    ++ 
Sbjct: 65  YVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSG-----SKPTPLLPGEAETILKRMGMDER 124

Query: 228 RHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAE 287
           + D  F  KE                                       TV+V  G FA 
Sbjct: 125 KTDIDFELKE---------------------------------------TVKVIDGPFAN 174

Query: 288 FEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 322
           F GS+++++    KV V   +FG+ET V+L+   I
Sbjct: 185 FTGSIEEIDYDKSKVKVFVNMFGRETPVELEFTQI 174

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BLAST of Chy8G152750.1 vs. ExPASy Swiss-Prot
Match: Q9HWC4 (Transcription termination/antitermination protein NusG OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=nusG PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-09
Identity = 44/218 (20.18%), Postives = 89/218 (40.83%), Query Frame = 0


Query: 104 LGPQWWVMRVARVRSQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAV 163
           +  +W+V+       + ++  L   +     + +F       +E  +++NG    + +  
Sbjct: 1   MAKRWYVVHAYSGYEKHVMRSLIERVKLAGMEEEFGEILVPTEEVVEMRNGQKRKSERKF 60

Query: 164 FPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKD 223
           FPG V ++  MN+     +++   V GF+G          +KP P+++ + +AI +   D
Sbjct: 61  FPGYVLVQMEMNEGTWHLVKDTPRVMGFIGGTA-------DKPAPITDREADAILRRVAD 120

Query: 224 EQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGT 283
             +                                  K +PK       PG TVRV  G 
Sbjct: 121 SGD----------------------------------KPKPK---TLFEPGETVRVIDGP 174

Query: 284 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 322
           FA+F G ++++N +  ++ V   +FG+ T V+L+   +
Sbjct: 181 FADFNGVVEEVNYEKSRIQVAVLIFGRSTPVELEFSQV 174

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BLAST of Chy8G152750.1 vs. ExPASy Swiss-Prot
Match: P65591 (Transcription termination/antitermination protein NusG OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=nusG PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.5e-09
Identity = 48/218 (22.02%), Postives = 89/218 (40.83%), Query Frame = 0


Query: 104 LGPQWWVMRVARVRSQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAV 163
           +  +W+V++      + +   L   +AR      F      V++   ++NG  T++ +  
Sbjct: 1   MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEKVVDIRNGRKTISERKS 60

Query: 164 FPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKD 223
           +PG V +   M  +    ++    V GF+G +        N+P P+S+ + E I ++   
Sbjct: 61  YPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRA-------NRPTPISQREAEIILQQV-- 120

Query: 224 EQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGT 283
                 Q  +EK                            PK  V     G  VRV  G 
Sbjct: 121 ------QTGIEK----------------------------PKPKVE-FEVGQQVRVNEGP 174

Query: 284 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 322
           FA+F G ++++N +  K+ V   +FG+ET V+L+   +
Sbjct: 181 FADFNGVVEEVNYERNKLRVSVQIFGRETPVELEFSQV 174

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BLAST of Chy8G152750.1 vs. ExPASy Swiss-Prot
Match: P65592 (Transcription termination/antitermination protein NusG OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=nusG PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.5e-09
Identity = 48/218 (22.02%), Postives = 89/218 (40.83%), Query Frame = 0


Query: 104 LGPQWWVMRVARVRSQEIVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAV 163
           +  +W+V++      + +   L   +AR      F      V++   ++NG  T++ +  
Sbjct: 1   MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEKVVDIRNGRKTISERKS 60

Query: 164 FPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKD 223
           +PG V +   M  +    ++    V GF+G +        N+P P+S+ + E I ++   
Sbjct: 61  YPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRA-------NRPTPISQREAEIILQQV-- 120

Query: 224 EQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGT 283
                 Q  +EK                            PK  V     G  VRV  G 
Sbjct: 121 ------QTGIEK----------------------------PKPKVE-FEVGQQVRVNEGP 174

Query: 284 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 322
           FA+F G ++++N +  K+ V   +FG+ET V+L+   +
Sbjct: 181 FADFNGVVEEVNYERNKLRVSVQIFGRETPVELEFSQV 174

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BLAST of Chy8G152750.1 vs. ExPASy Swiss-Prot
Match: P35872 (Transcription termination/antitermination protein NusG OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=nusG PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.5e-09
Identity = 54/222 (24.32%), Postives = 92/222 (41.44%), Query Frame = 0


Query: 107 QWWVMRVARVRSQEIVERLARSL-ARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFP 166
           +W+ +     + ++    L + + A    D  F++  P+ +     + G   V  K +FP
Sbjct: 4   EWYAVHTLVGQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVVELREGGKKEVVRKKLFP 63

Query: 167 GSVFIRCVMN-----KEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKE 226
           G +FI+  +       E  + +R   G+ GFVGA +        +P P+S  ++  I   
Sbjct: 64  GYLFIQMDLGDEEEPNEAWEVVRGTPGITGFVGAGM--------RPVPLSPDEVRHI--- 123

Query: 227 AKDEQERHDQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVA 286
                                        L+ +G    K      KA      G  VRV 
Sbjct: 124 -----------------------------LEVSGLLGKK---EAPKAQVAFREGDQVRVV 182

Query: 287 SGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDII 323
           SG FA+F G++ ++N + GKV V  T+FG+ET V+LD   ++
Sbjct: 184 SGPFADFTGTVTEINPERGKVKVMVTIFGRETPVELDFSQVV 182

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BLAST of Chy8G152750.1 vs. ExPASy TrEMBL
Match: A0A0A0KZV1 (NGN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G307370 PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.5e-173
Identity = 318/326 (97.55%), Postives = 322/326 (98.77%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MACGLL+WS VSLCSTSFPALSFSLSSSRRTQLS+SASVET AAAADD QQLSVRERRKL
Sbjct: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD
Sbjct: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN+SALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILETK 327
           VTVGFTLFGKETLVDLDIGDII+ETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 326

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BLAST of Chy8G152750.1 vs. ExPASy TrEMBL
Match: A0A1S3BKU2 (transcription termination/antitermination protein NusG OS=Cucumis melo OX=3656 GN=LOC103490936 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.3e-169
Identity = 313/326 (96.01%), Postives = 318/326 (97.55%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MA GLL+WSP+SLCSTS PALSFSLSSSRRTQLSISASVET AAAADDVQQLS R+RRKL
Sbjct: 1   MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLCRKPKKEFA WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTV PKAVFPGSVFIRCVMNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQEEA
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PNSSALKTDLDTNGTTATKHKGR KKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILETK 327
           VTVGFTLFGKETLVDLDIGDII+ETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 326

[Close]

BLAST of Chy8G152750.1 vs. ExPASy TrEMBL
Match: A0A6J1DDH4 (uncharacterized protein LOC111019492 OS=Momordica charantia OX=3673 GN=LOC111019492 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.8e-155
Identity = 291/325 (89.54%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MA GLL WS +SL S+SFPALSFSLSSS+ TQLSISA++ET  AAADDVQQLS RERR+L
Sbjct: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PNS+  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILET 326
           VTVGFTLFGKETLVDLDIGDI++ET
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIVVET 323

[Close]

BLAST of Chy8G152750.1 vs. ExPASy TrEMBL
Match: A0A6J1EV13 (uncharacterized protein LOC111438223 OS=Cucurbita moschata OX=3662 GN=LOC111438223 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.7e-153
Identity = 286/326 (87.73%), Postives = 306/326 (93.87%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MACGLL W+ + L S SFP+LSFSLSSS RTQLSISA++ET   AADDV QLS RERR+L
Sbjct: 1   MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERRE K TTNWREEVEERLC+KPKKEFANWTEKLNLDYLAKLGPQWWVMRV+RVR QE
Sbjct: 61  RNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVSRVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEKE+E+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN S L+TDLDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS K
Sbjct: 241 PNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILETK 327
           VTVGFTLFGKETLV+LDIGDII+ETK
Sbjct: 301 VTVGFTLFGKETLVELDIGDIIVETK 322

[Close]

BLAST of Chy8G152750.1 vs. ExPASy TrEMBL
Match: A0A6J1HQX6 (uncharacterized protein LOC111465889 OS=Cucurbita maxima OX=3661 GN=LOC111465889 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.4e-152
Identity = 285/326 (87.42%), Postives = 305/326 (93.56%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MAC LL W+ +SL S SFP+LSFSLSSS RTQLSISA++ET   AADDV QLS RERR+L
Sbjct: 1   MACRLLTWTTLSLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERRE K TTNWREEVEERLC+KPKKEFANWTEKLNLDYL+KLGPQWWVMRV+RVR QE
Sbjct: 61  RNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLSKLGPQWWVMRVSRVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEK++E+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKQKEQA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN S L+T LDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKK+NRKSGK
Sbjct: 241 PNPSVLETGLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILETK 327
           VTVGFTLFGKETLV LDIGDII+ETK
Sbjct: 301 VTVGFTLFGKETLVVLDIGDIIVETK 322

[Close]

BLAST of Chy8G152750.1 vs. NCBI nr
Match: XP_004147896.1 (uncharacterized protein LOC101211195 [Cucumis sativus] >KGN54344.1 hypothetical protein Csa_018004 [Cucumis sativus])

HSP 1 Score: 618 bits (1593), Expect = 1.65e-222
Identity = 318/326 (97.55%), Postives = 322/326 (98.77%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MACGLL+WS VSLCSTSFPALSFSLSSSRRTQLS+SASVET AAAADD QQLSVRERRKL
Sbjct: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD
Sbjct: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN+SALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILETK 326
           VTVGFTLFGKETLVDLDIGDII+ETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 326

[Close]

BLAST of Chy8G152750.1 vs. NCBI nr
Match: XP_008448915.1 (PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo] >XP_008448924.1 PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo])

HSP 1 Score: 605 bits (1561), Expect = 1.24e-217
Identity = 313/326 (96.01%), Postives = 318/326 (97.55%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MA GLL+WSP+SLCSTS PALSFSLSSSRRTQLSISASVET AAAADDVQQLS R+RRKL
Sbjct: 1   MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLCRKPKKEFA WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTV PKAVFPGSVFIRCVMNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQEEA
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PNSSALKTDLDTNGTTATKHKGR KKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILETK 326
           VTVGFTLFGKETLVDLDIGDII+ETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 326

[Close]

BLAST of Chy8G152750.1 vs. NCBI nr
Match: XP_038880828.1 (transcription termination/antitermination protein NusG isoform X1 [Benincasa hispida])

HSP 1 Score: 585 bits (1507), Expect = 2.03e-209
Identity = 300/326 (92.02%), Postives = 315/326 (96.63%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MACGLL+WSP+SL S SFPALSFSLSS +RTQLSISA+VET +AA DD+QQLS RERRKL
Sbjct: 1   MACGLLIWSPISLRSISFPALSFSLSSPKRTQLSISATVETPSAA-DDIQQLSARERRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA WTEKLNLDYL+KLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLSKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV+EKRKLKNGTYTV PKA+FPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKALFPGSVFIRCIMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQ+ A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQDRA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PNSSAL+TDLDTNGTTATK KGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSSALETDLDTNGTTATKQKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILETK 326
           VTVGFTLFGKETLVDLDIGDII+ETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 325

[Close]

BLAST of Chy8G152750.1 vs. NCBI nr
Match: XP_022151589.1 (uncharacterized protein LOC111019492 [Momordica charantia])

HSP 1 Score: 558 bits (1438), Expect = 6.62e-199
Identity = 291/325 (89.54%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MA GLL WS +SL S+SFPALSFSLSSS+ TQLSISA++ET  AAADDVQQLS RERR+L
Sbjct: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PNS+  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILET 325
           VTVGFTLFGKETLVDLDIGDI++ET
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIVVET 323

[Close]

BLAST of Chy8G152750.1 vs. NCBI nr
Match: XP_022931956.1 (uncharacterized protein LOC111438223 [Cucurbita moschata])

HSP 1 Score: 551 bits (1421), Expect = 2.30e-196
Identity = 286/326 (87.73%), Postives = 306/326 (93.87%), Query Frame = 0


Query: 1   MACGLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKL 60
           MACGLL W+ + L S SFP+LSFSLSSS RTQLSISA++ET   AADDV QLS RERR+L
Sbjct: 1   MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERRE KTT NWREEVEERLC+KPKKEFANWTEKLNLDYLAKLGPQWWVMRV+RVR QE
Sbjct: 61  RNERRETKTT-NWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVSRVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEKE+E+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQA 240

Query: 241 PNSSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN S L+TDLDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS K
Sbjct: 241 PNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIILETK 326
           VTVGFTLFGKETLV+LDIGDII+ETK
Sbjct: 301 VTVGFTLFGKETLVELDIGDIIVETK 322

[Close]

BLAST of Chy8G152750.1 vs. TAIR 10
Match: AT3G09210.1 (plastid transcriptionally active 13 )

HSP 1 Score: 324.7 bits (831), Expect = 8.5e-89
Identity = 181/341 (53.08%), Postives = 239/341 (70.09%), Query Frame = 0


Query: 4   GLLLWSPVSLCSTSFPALSFSLSSSRRTQLSISASVETTAAAADDVQQLSVRERRKLRNE 63
           GLL WS  SL  + +  ++       +TQ SI+A V       +   QL+ +ERR+LRNE
Sbjct: 7   GLLQWSRSSLIPSIYTPIN-------KTQFSIAACV------IERNHQLTAKERRQLRNE 66

Query: 64  RREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQEIVE 123
           RRE K   +WREEVEE+L +KPKK +A WTE+LNLD LA+ GPQWW +RV+R+R  E  +
Sbjct: 67  RRESKLGYSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQ 126

Query: 124 RLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIR 183
            LAR+LAR +P+++F +Y PSV+ KRKLKNG+ +V PK VFPG +FIRC++NKEIHD IR
Sbjct: 127 ILARALARQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIR 186

Query: 184 ECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLE--KEQEEA- 243
           + DGVGGF+G+KVGNTKRQINKP+PV ++D+EAIFK+AK+ QE+ D  F E  + +EEA 
Sbjct: 187 DVDGVGGFIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEAS 246

Query: 244 ----------PNSSALKTDLDT-------NGTTATKHKGRPKKAVNTLSPGSTVRVASGT 303
                      NS  ++T  ++         T AT+ K + KK    L+ GSTVRV SGT
Sbjct: 247 ILASQELLALSNSDVIETVAESKPKRAPRKATLATETKAKKKK----LAAGSTVRVLSGT 306

Query: 304 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIILE 325
           FAEF G+LKKLNRK+ K TVGFTLFGKETLV++DI +++ E
Sbjct: 307 FAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330

The following BLAST results are available for this feature:

BLAST of Chy8G152750.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q06795	1.0e-09	25.58	Transcription termination/antitermination protein NusG OS=Bacillus subtilis (str...	[more]
Q9HWC4	5.0e-09	20.18	Transcription termination/antitermination protein NusG OS=Pseudomonas aeruginosa...	[more]
P65591	6.5e-09	22.02	Transcription termination/antitermination protein NusG OS=Neisseria meningitidis...	[more]
P65592	6.5e-09	22.02	Transcription termination/antitermination protein NusG OS=Neisseria meningitidis...	[more]
P35872	6.5e-09	24.32	Transcription termination/antitermination protein NusG OS=Thermus thermophilus (...	[more]

BLAST of Chy8G152750.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZV1	2.5e-173	97.55	NGN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G307370 PE=4 SV...	[more]
A0A1S3BKU2	1.3e-169	96.01	transcription termination/antitermination protein NusG OS=Cucumis melo OX=3656 G...	[more]
A0A6J1DDH4	1.8e-155	89.54	uncharacterized protein LOC111019492 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1EV13	1.7e-153	87.73	uncharacterized protein LOC111438223 OS=Cucurbita moschata OX=3662 GN=LOC1114382...	[more]
A0A6J1HQX6	2.4e-152	87.42	uncharacterized protein LOC111465889 OS=Cucurbita maxima OX=3661 GN=LOC111465889...	[more]

BLAST of Chy8G152750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147896.1	1.65e-222	97.55	uncharacterized protein LOC101211195 [Cucumis sativus] >KGN54344.1 hypothetical ...	[more]
XP_008448915.1	1.24e-217	96.01	PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo]...	[more]
XP_038880828.1	2.03e-209	92.02	transcription termination/antitermination protein NusG isoform X1 [Benincasa his...	[more]
XP_022151589.1	6.62e-199	89.54	uncharacterized protein LOC111019492 [Momordica charantia]	[more]
XP_022931956.1	2.30e-196	87.73	uncharacterized protein LOC111438223 [Cucurbita moschata]	[more]

BLAST of Chy8G152750.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09210.1	8.5e-89	53.08	plastid transcriptionally active 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006645	NusG, N-terminal	SMART	SM00738	nusgn_4	coord: 105..221 e-value: 1.6E-20 score: 84.2
IPR006645	NusG, N-terminal	PFAM	PF02357	NusG	coord: 107..217 e-value: 1.5E-10 score: 41.5
IPR036735	NusG, N-terminal domain superfamily	GENE3D	3.30.70.940		coord: 106..222 e-value: 1.4E-18 score: 69.0
IPR036735	NusG, N-terminal domain superfamily	SUPERFAMILY	82679	N-utilization substance G protein NusG, N-terminal domain	coord: 106..223
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 269..322 e-value: 3.2E-12 score: 48.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..242
None	No IPR available	PANTHER	PTHR30265:SF4	TRANSCRIPTION ANTITERMINATION PROTEIN RFAH	coord: 31..322
None	No IPR available	CDD	cd06091	KOW_NusG	coord: 271..321 e-value: 9.85307E-13 score: 60.1636
None	No IPR available	CDD	cd09890	NGN_plant	coord: 107..218 e-value: 3.65971E-46 score: 150.581
IPR043425	NusG-like	PANTHER	PTHR30265	RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG	coord: 31..322
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 271..321

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy8G152750	Chy8G152750	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy8G152750.1.exon4	Chy8G152750.1.exon4	exon
Chy8G152750.1.exon3	Chy8G152750.1.exon3	exon
Chy8G152750.1.exon2	Chy8G152750.1.exon2	exon
Chy8G152750.1.exon1	Chy8G152750.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy8G152750.1.cds4	Chy8G152750.1.cds4	CDS
Chy8G152750.1.cds3	Chy8G152750.1.cds3	CDS
Chy8G152750.1.cds2	Chy8G152750.1.cds2	CDS
Chy8G152750.1.cds1	Chy8G152750.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy8G152750.1	Chy8G152750.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated