Chy8G152320.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy8G152320.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein EMB-1-like
Location	chrH08: 14126474 .. 14127356 (+)
Sequence length	276
RNA-Seq Expression	Chy8G152320.1
Synteny	Chy8G152320.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGGAGCAGGAAAGAGGTAAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCATCCCCGGTGGAACTGGAGGCAAGAGTCTTGAAGCTCAGGAGCACCTTGCTGAAGGTGTGCCATGCCCACTTGTCCACTTTTCAAACTTGGTTTTTTGTTAATCTAATACTTCGACAATTTAACTAACTTTTATCAAATATTGTCAATATTATGTCTCCGTAGTTCTTATAAGATTTCTTTGGTTTTTCATAATAATTTACACAATCGGTTTAAACTAATAGTTATTTAACTTTTAATTTTGTATCTTAGTCACCTCGATCCAACCTAGGCTGCTAAGTTCACGTCTTTAATGAGTCAGCTAGATGTTATAATAAGACTATGATTTTATGTTCATGTATGTGTATGTATACCCTATAAAATTTTATTAAAAAATCCATTACACACATTTTAAAATGTTTGGAACAAAAAACTGGAAGTTTTTAGACTTGCTATAAGTTCTAAGTTCAAGACCATCGACCATCTTTTTCTTGAAAGTTCAAGATCCCGTTCAACAAAAATGCAGTTACTCATGTTTAAAATTATCAAACAGTTGCAAAATCGAGTTCGTGATAACTTCTACTTTTCAAACCCATTCCAACCACTAAAGTGAGAAGTAGGGACTCATTCATAACAATACTAAAGACTAAAGTAGTGATAGTTTGATTGTGAATGGTGATGGCAGGGCGGAGCCGTGGGGGCCAAACAAGGAAGGAGCAGCTGGGACACGAAGGATACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACAGGTATGTCTGGAGGAGAACGTGCTGCTGAGGAAGGTGTTGAGATTGACGAATCCAAGTTCAGGACTAAATAA

mRNA sequence

ATGTCGTCGGAGCAGGAAAGAGGTAAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCATCCCCGGTGGAACTGGAGGCAAGAGTCTTGAAGCTCAGGAGCACCTTGCTGAAGGGCGGAGCCGTGGGGGCCAAACAAGGAAGGAGCAGCTGGGACACGAAGGATACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACAGGTATGTCTGGAGGAGAACGTGCTGCTGAGGAAGGTGTTGAGATTGACGAATCCAAGTTCAGGACTAAATAA

Coding sequence (CDS)

ATGTCGTCGGAGCAGGAAAGAGGTAAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCATCCCCGGTGGAACTGGAGGCAAGAGTCTTGAAGCTCAGGAGCACCTTGCTGAAGGGCGGAGCCGTGGGGGCCAAACAAGGAAGGAGCAGCTGGGACACGAAGGATACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACAGGTATGTCTGGAGGAGAACGTGCTGCTGAGGAAGGTGTTGAGATTGACGAATCCAAGTTCAGGACTAAATAA

Protein sequence

MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMSGGERAAEEGVEIDESKFRTK*

Homology

[Close]

BLAST of Chy8G152320.1 vs. ExPASy Swiss-Prot
Match: P17639 (Protein EMB-1 OS=Daucus carota OX=4039 GN=EMB-1 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 5.6e-35
Identity = 75/91 (82.42%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          M+S+QE+ +LDARARQGETV+PGGTGGKSLEAQ+HLAEGRS+GGQTRKEQLG EGY EMG
Sbjct: 1  MASQQEKKELDARARQGETVVPGGTGGKSLEAQQHLAEGRSKGGQTRKEQLGGEGYHEMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          RKGGLSN  MSGGERA +EG++IDESKFRTK
Sbjct: 61 RKGGLSNNDMSGGERAEQEGIDIDESKFRTK 91

[Close]

BLAST of Chy8G152320.1 vs. ExPASy Swiss-Prot
Match: P42755 (Em protein H5 OS=Triticum aestivum OX=4565 GN=EMH5 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-32
Identity = 71/90 (78.89%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 2  SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGR 61
          S +QER +LD  AR+GETV+PGGTGGKSLEAQEHLA+GRSRGG+TRKEQLG EGY+EMGR
Sbjct: 3  SGQQERSELDRMAREGETVVPGGTGGKSLEAQEHLADGRSRGGETRKEQLGEEGYREMGR 62

Query: 62 KGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          KGGLS    SGGERAA EG+EIDESKF+TK
Sbjct: 63 KGGLSTMEESGGERAAREGIEIDESKFKTK 92

[Close]

BLAST of Chy8G152320.1 vs. ExPASy Swiss-Prot
Match: Q02973 (Em-like protein GEA6 OS=Arabidopsis thaliana OX=3702 GN=EM6 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 9.9e-32
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          M+S+QE+ +LD RA++GETV+PGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQ+MG
Sbjct: 1  MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQLGTEGYQQMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          RKGGLS     GGE A EEGVEIDESKFRTK
Sbjct: 61 RKGGLSTGDKPGGEHAEEEGVEIDESKFRTK 91

[Close]

BLAST of Chy8G152320.1 vs. ExPASy Swiss-Prot
Match: Q05190 (Late embryogenesis abundant protein B19.1A OS=Hordeum vulgare OX=4513 GN=B19.1A PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-31
Identity = 68/90 (75.56%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 2  SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGR 61
          S +QER +LD +AR+GETV+PGGTGGKSLEAQ++LAEGRSRGGQTR+EQ+G EGY EMGR
Sbjct: 3  SGQQERSQLDRKAREGETVVPGGTGGKSLEAQQNLAEGRSRGGQTRREQMGQEGYSEMGR 62

Query: 62 KGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          KGGLS+   SGGERAA EG++IDESKF+TK
Sbjct: 63 KGGLSSNDESGGERAAREGIDIDESKFKTK 92

[Close]

BLAST of Chy8G152320.1 vs. ExPASy Swiss-Prot
Match: Q08000 (Em protein H2 OS=Triticum aestivum OX=4565 GN=EMH2 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.9e-31
Identity = 68/90 (75.56%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 2  SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGR 61
          S +QER +LD +AR+GETV+PGGTGGKSLEA E+LAEGRSRGGQTR+EQ+G EGY EMGR
Sbjct: 3  SGQQERSQLDRKAREGETVVPGGTGGKSLEAHENLAEGRSRGGQTRREQMGEEGYSEMGR 62

Query: 62 KGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          KGGLS    SGGERAA EG++IDESKF+TK
Sbjct: 63 KGGLSTNDESGGERAAREGIDIDESKFKTK 92

[Close]

BLAST of Chy8G152320.1 vs. ExPASy TrEMBL
Match: A0A0A0KY00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G311230 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG
Sbjct: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          RKGGLSNTGMSGGERAAEEGVEIDESKFR K
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRNK 91

[Close]

BLAST of Chy8G152320.1 vs. ExPASy TrEMBL
Match: A0A5D3E041 (Protein EMB-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00020 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.7e-39
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQERG+LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG
Sbjct: 1  MSSEQERGELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          RKGGLSNTGMSGGERAAEEGVEIDESKF TK
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFTTK 91

[Close]

BLAST of Chy8G152320.1 vs. ExPASy TrEMBL
Match: A0A1S3CKY4 (protein EMB-1-like OS=Cucumis melo OX=3656 GN=LOC103502143 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.7e-39
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQERG+LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG
Sbjct: 1  MSSEQERGELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          RKGGLSNTGMSGGERAAEEGVEIDESKF TK
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFTTK 91

[Close]

BLAST of Chy8G152320.1 vs. ExPASy TrEMBL
Match: A0A6J1CSC5 (protein EMB-1-like OS=Momordica charantia OX=3673 GN=LOC111013847 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.4e-38
Identity = 86/91 (94.51%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          RKGGLSNTG+SGGERAAEEGVEIDESKFRTK
Sbjct: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91

[Close]

BLAST of Chy8G152320.1 vs. ExPASy TrEMBL
Match: A0A6J1ISS4 (protein EMB-1 OS=Cucurbita maxima OX=3661 GN=LOC111478344 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.2e-37
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG
Sbjct: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          RKGGLSN+GM GGERAAEEGVEIDESKFR K
Sbjct: 61 RKGGLSNSGMPGGERAAEEGVEIDESKFRAK 91

[Close]

BLAST of Chy8G152320.1 vs. NCBI nr
Match: XP_004148611.1 (protein EMB-1 [Cucumis sativus] >KGN54388.1 hypothetical protein Csa_018191 [Cucumis sativus])

HSP 1 Score: 175 bits (444), Expect = 4.54e-55
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG
Sbjct: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 91
          RKGGLSNTGMSGGERAAEEGVEIDESKFR K
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRNK 91

[Close]

BLAST of Chy8G152320.1 vs. NCBI nr
Match: XP_008464209.1 (PREDICTED: protein EMB-1-like [Cucumis melo] >KAA0037756.1 protein EMB-1-like [Cucumis melo var. makuwa] >TYK29242.1 protein EMB-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 173 bits (438), Expect = 3.97e-54
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQERG+LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG
Sbjct: 1  MSSEQERGELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 91
          RKGGLSNTGMSGGERAAEEGVEIDESKF TK
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFTTK 91

[Close]

BLAST of Chy8G152320.1 vs. NCBI nr
Match: XP_022144068.1 (protein EMB-1-like [Momordica charantia])

HSP 1 Score: 169 bits (429), Expect = 8.83e-53
Identity = 86/91 (94.51%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 91
          RKGGLSNTG+SGGERAAEEGVEIDESKFRTK
Sbjct: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91

[Close]

BLAST of Chy8G152320.1 vs. NCBI nr
Match: XP_022949998.1 (protein EMB-1 [Cucurbita moschata] >XP_022978323.1 protein EMB-1 [Cucurbita maxima] >XP_023543342.1 protein EMB-1 [Cucurbita pepo subsp. pepo] >KAG6603576.1 Protein EMB-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166 bits (421), Expect = 1.47e-51
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG
Sbjct: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 91
          RKGGLSN+GM GGERAAEEGVEIDESKFR K
Sbjct: 61 RKGGLSNSGMPGGERAAEEGVEIDESKFRAK 91

[Close]

BLAST of Chy8G152320.1 vs. NCBI nr
Match: XP_038883868.1 (protein EMB-1-like [Benincasa hispida])

HSP 1 Score: 165 bits (418), Expect = 4.34e-51
Identity = 84/90 (93.33%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          MSSEQER +LD RARQGETV+ GGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG
Sbjct: 1  MSSEQERSELDVRARQGETVVAGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRT 90
          RKGGLSNTGMSGGERAAEEGVEIDESKF+T
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFKT 90

[Close]

BLAST of Chy8G152320.1 vs. TAIR 10
Match: AT2G40170.1 (Stress induced protein )

HSP 1 Score: 137.1 bits (344), Expect = 7.1e-33
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60
          M+S+QE+ +LD RA++GETV+PGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQ+MG
Sbjct: 1  MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQLGTEGYQQMG 60

Query: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRTK 92
          RKGGLS     GGE A EEGVEIDESKFRTK
Sbjct: 61 RKGGLSTGDKPGGEHAEEEGVEIDESKFRTK 91

[Close]

BLAST of Chy8G152320.1 vs. TAIR 10
Match: AT3G51810.1 (Stress induced protein )

HSP 1 Score: 107.8 bits (268), Expect = 4.6e-24
Identity = 70/150 (46.67%), Postives = 77/150 (51.33%), Query Frame = 0


Query: 2   SSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ---- 61
           S +  R +LD +A+QGETV+PGGTGG SLEAQEHLAEGRS+GGQTRKEQLGHEGYQ    
Sbjct: 3   SKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEIGH 62

Query: 62  --------------------------------------------------------EMGR 92
                                                                   EMGR
Sbjct: 63  KGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYKEMGR 122

The following BLAST results are available for this feature:

BLAST of Chy8G152320.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P17639	5.6e-35	82.42	Protein EMB-1 OS=Daucus carota OX=4039 GN=EMB-1 PE=1 SV=1	[more]
P42755	3.4e-32	78.89	Em protein H5 OS=Triticum aestivum OX=4565 GN=EMH5 PE=2 SV=1	[more]
Q02973	9.9e-32	78.02	Em-like protein GEA6 OS=Arabidopsis thaliana OX=3702 GN=EM6 PE=2 SV=1	[more]
Q05190	2.2e-31	75.56	Late embryogenesis abundant protein B19.1A OS=Hordeum vulgare OX=4513 GN=B19.1A ...	[more]
Q08000	4.9e-31	75.56	Em protein H2 OS=Triticum aestivum OX=4565 GN=EMH2 PE=2 SV=1	[more]

BLAST of Chy8G152320.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY00	1.3e-39	98.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G311230 PE=4 SV=1	[more]
A0A5D3E041	6.7e-39	96.70	Protein EMB-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G...	[more]
A0A1S3CKY4	6.7e-39	96.70	protein EMB-1-like OS=Cucumis melo OX=3656 GN=LOC103502143 PE=3 SV=1	[more]
A0A6J1CSC5	7.4e-38	94.51	protein EMB-1-like OS=Momordica charantia OX=3673 GN=LOC111013847 PE=3 SV=1	[more]
A0A6J1ISS4	6.2e-37	93.41	protein EMB-1 OS=Cucurbita maxima OX=3661 GN=LOC111478344 PE=3 SV=1	[more]

BLAST of Chy8G152320.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148611.1	4.54e-55	98.90	protein EMB-1 [Cucumis sativus] >KGN54388.1 hypothetical protein Csa_018191 [Cuc...	[more]
XP_008464209.1	3.97e-54	96.70	PREDICTED: protein EMB-1-like [Cucumis melo] >KAA0037756.1 protein EMB-1-like [C...	[more]
XP_022144068.1	8.83e-53	94.51	protein EMB-1-like [Momordica charantia]	[more]
XP_022949998.1	1.47e-51	93.41	protein EMB-1 [Cucurbita moschata] >XP_022978323.1 protein EMB-1 [Cucurbita maxi...	[more]
XP_038883868.1	4.34e-51	93.33	protein EMB-1-like [Benincasa hispida]	[more]

BLAST of Chy8G152320.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40170.1	7.1e-33	78.02	Stress induced protein	[more]
AT3G51810.1	4.6e-24	46.67	Stress induced protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038956	Late embryogenesis abundant protein, LEA_5 subgroup	PFAM	PF00477	LEA_5	coord: 2..53 e-value: 1.4E-22 score: 80.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..91
None	No IPR available	PANTHER	PTHR34671:SF12	LATE EMBRYOGENESIS ABUNDANT PROTEIN D-19	coord: 1..90
IPR000389	Small hydrophilic plant seed protein	PANTHER	PTHR34671	EM-LIKE PROTEIN GEA1	coord: 1..90

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy8G152320	Chy8G152320	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy8G152320.1.exon1	Chy8G152320.1.exon1	exon
Chy8G152320.1.exon2	Chy8G152320.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy8G152320.1.cds1	Chy8G152320.1.cds1	CDS
Chy8G152320.1.cds2	Chy8G152320.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy8G152320.1	Chy8G152320.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048700	acquisition of desiccation tolerance in seed
biological_process	GO:0009737	response to abscisic acid