Chy8G146200.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy8G146200.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Exopolygalacturonase-like
Location	chrH08: 493120 .. 494788 (+)
Sequence length	1053
RNA-Seq Expression	Chy8G146200.1
Synteny	Chy8G146200.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACATGGATTGCAGCTTGCCGGAACACAGTCGGTCCGGCGAAGTTCTTAATCCCACAAGGCACATTTCTGGTGGGTCCAGTGACTTTCGCCGGTCCGTGCAAAAGCTTTCCAATCACCCTCGAAAATCAAGGAACTGTAAAGGCCACCACCGATATTAGTGCATATTCATCTCCAGAATGGTTCTCCATTGAAGATATTACTGGTTTTATCCTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCCTCTCCGTTTGGCCCTACGACGACTGCAAGAAAAACAACTTATGCCAACTTCTTCCAATCGTAACTATATATTTTTGCCTTTCATTCTAAATTACAAGTGTTTTACACTCTAAACTTTTCGATTTTTGTCTAACACGTATATAAAAAAAACCTGCAATAGACCAAACATATTTAAAAATGAAAATTTATTTTAAATTACAAAAACTATTAAAATTATTTAGAAAATATATAGCAAAATTCCATATATCCTATCGACAAGAATCTGAAATTTTACTTTAAATATTTTTATTTATTATGCTATATTCGAAAATGTCTTTTCAACGATGGTGAGTAATTCTTGTTTTTTGTTGCAGTCGATTAAATTTACGAGATTAAATCACACGATTGTTGATGGGCTCACTTCGATAAACAGCATGGGGTTTCACACGTCTGTATTCTACTGCTACAATTTCACTGCTACTAACATAAAAATTATAGCTCCACATAATAGTCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTGCCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATTGGCCACAGTATTGAGAATATCACCGTCACCAACGTCACTTGCGGCCCTGGACATGGCCTTCGGTAAATAATGCACCTTTTAAAAAAGAAATTAAAGATTAAATAGACACAAAGGAAAACATCTGAAAGCTTTCCATTATTCATCTTTTTCAGTGTGGGCAGCTTGGGCAAATACTCGAAAGAAAAGGGTGTCTACGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCCACCAATGGTGCCAGAATCAAGACTTGGGCTAGCCCTATCTCGGGGTTAGCCTCGAGAATTATCTTTGAAGACATTGTAATGTACAACGTAAAAAATCCTATAATTATCAATCAAACCTACAGCACTAAGAAGAAAAAGGTAAATAATAACAATAAAAGCTAACCATGTTATTAGTTTAATCCAATCGAGATGTCAAGAGCATAAAATGAGAGTGTTAAGAAAATGTCAATCTAAAATTGAGATGTTCAGATGCACTATATCTAATGTTTCTTCTTCTTGTATATCTTATTAAAAGAAACAGATGATCTTAATCTTTAGAGTTTAATAGTGATTTAACAATAACGTGTTACTAAACTTATATGTGCATGTAGGAATCAAATTGGAAGGTTAGCAATGTACACTTCAAGAACATTCGGGGAACATCGACAACGAATGTGGCAGTGTTGTTGGAGTGCAGCAAGTTGTTTCCATGCGAGGGGGTGGAGTTGAGGGACATTAACTTGAGTTTTGGAGGCACCAACTTGAGAAATACGACCATTGTTTCTTCATGTTCGTATGCAAAGATTGCTACTTTTGGGGTTCAAAACCCACCACCTTGTGTTGTATAA

mRNA sequence

ATGACAACATGGATTGCAGCTTGCCGGAACACAGTCGGTCCGGCGAAGTTCTTAATCCCACAAGGCACATTTCTGGTGGGTCCAGTGACTTTCGCCGGTCCGTGCAAAAGCTTTCCAATCACCCTCGAAAATCAAGGAACTGTAAAGGCCACCACCGATATTAGTGCATATTCATCTCCAGAATGGTTCTCCATTGAAGATATTACTGGTTTTATCCTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCCTCTCCGTTTGGCCCTACGACGACTGCAAGAAAAACAACTTATGCCAACTTCTTCCAATCTCGATTAAATTTACGAGATTAAATCACACGATTGTTGATGGGCTCACTTCGATAAACAGCATGGGGTTTCACACGTCTGTATTCTACTGCTACAATTTCACTGCTACTAACATAAAAATTATAGCTCCACATAATAGTCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTGCCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATTGGCCACAGTATTGAGAATATCACCGTCACCAACGTCACTTGCGGCCCTGGACATGGCCTTCGTGTGGGCAGCTTGGGCAAATACTCGAAAGAAAAGGGTGTCTACGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCCACCAATGGTGCCAGAATCAAGACTTGGGCTAGCCCTATCTCGGGGTTAGCCTCGAGAATTATCTTTGAAGACATTGTAATGTACAACGTAAAAAATCCTATAATTATCAATCAAACCTACAGCACTAAGAAGAAAAAGGAATCAAATTGGAAGGTTAGCAATGTACACTTCAAGAACATTCGGGGAACATCGACAACGAATGTGGCAGTGTTGTTGGAGTGCAGCAAGTTGTTTCCATGCGAGGGGGTGGAGTTGAGGGACATTAACTTGAGTTTTGGAGGCACCAACTTGAGAAATACGACCATTGTTTCTTCATGTTCGTATGCAAAGATTGCTACTTTTGGGGTTCAAAACCCACCACCTTGTGTTGTATAA

Coding sequence (CDS)

ATGACAACATGGATTGCAGCTTGCCGGAACACAGTCGGTCCGGCGAAGTTCTTAATCCCACAAGGCACATTTCTGGTGGGTCCAGTGACTTTCGCCGGTCCGTGCAAAAGCTTTCCAATCACCCTCGAAAATCAAGGAACTGTAAAGGCCACCACCGATATTAGTGCATATTCATCTCCAGAATGGTTCTCCATTGAAGATATTACTGGTTTTATCCTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCCTCTCCGTTTGGCCCTACGACGACTGCAAGAAAAACAACTTATGCCAACTTCTTCCAATCTCGATTAAATTTACGAGATTAAATCACACGATTGTTGATGGGCTCACTTCGATAAACAGCATGGGGTTTCACACGTCTGTATTCTACTGCTACAATTTCACTGCTACTAACATAAAAATTATAGCTCCACATAATAGTCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTGCCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATTGGCCACAGTATTGAGAATATCACCGTCACCAACGTCACTTGCGGCCCTGGACATGGCCTTCGTGTGGGCAGCTTGGGCAAATACTCGAAAGAAAAGGGTGTCTACGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCCACCAATGGTGCCAGAATCAAGACTTGGGCTAGCCCTATCTCGGGGTTAGCCTCGAGAATTATCTTTGAAGACATTGTAATGTACAACGTAAAAAATCCTATAATTATCAATCAAACCTACAGCACTAAGAAGAAAAAGGAATCAAATTGGAAGGTTAGCAATGTACACTTCAAGAACATTCGGGGAACATCGACAACGAATGTGGCAGTGTTGTTGGAGTGCAGCAAGTTGTTTCCATGCGAGGGGGTGGAGTTGAGGGACATTAACTTGAGTTTTGGAGGCACCAACTTGAGAAATACGACCATTGTTTCTTCATGTTCGTATGCAAAGATTGCTACTTTTGGGGTTCAAAACCCACCACCTTGTGTTGTATAA

Protein sequence

MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV*

Homology

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BLAST of Chy8G146200.1 vs. ExPASy Swiss-Prot
Match: P49062 (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.6e-82
Identity = 154/320 (48.12%), Postives = 204/320 (63.75%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           + TWI  C + V PA  L+P+GTFL GPV FAGPCKS  +T+   GT+ ATT  S Y++P
Sbjct: 72  LNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAGPCKS-KVTVNVIGTIIATT--SGYATP 131

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWF  E +   +LTG+G F G+G +VW  D C K   C L P S+KF  + +  ++G++S
Sbjct: 132 EWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISS 191

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +N+  FH  +    N    NIK+ AP  SPNTDG+HLS +  V+I +S I TGDDCVS+G
Sbjct: 192 VNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVG 251

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
               N+TV  V CGPGHGL VGSLGKY  E+ V  + V NCT+    NG RIKTW     
Sbjct: 252 RGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDP 311

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
             A  I FE+I+M +VKNPIII+Q Y + +  +S   +S++ FKNIRGT+ T   V + C
Sbjct: 312 SKAVDIKFENIIMQSVKNPIIIDQNYGS-RGGDSQVAISDILFKNIRGTTITKDVVQIMC 371

Query: 301 SKLFPCEGVELRDINLSFGG 321
           SK  PC+GV + D+NL + G
Sbjct: 372 SKSVPCQGVNVVDVNLDYVG 386

[Close]

BLAST of Chy8G146200.1 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.9e-79
Identity = 152/352 (43.18%), Postives = 205/352 (58.24%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           +  W  AC  +V P+  +IP+GT+L+  V   GPCK+ PI +  QGT++A  D SA+  P
Sbjct: 50  LDAWKEACA-SVTPSTVVIPKGTYLLSKVNLEGPCKA-PIEINVQGTIQAPADPSAFKDP 109

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
            W     +  F + G G+FDGQG   +  + C+       LP++I+F  L + ++  +TS
Sbjct: 110 NWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITS 169

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
            +S  FH +VF C N T   +KI AP  SPNTDG+H+  S+ V I  S I TGDDC+SIG
Sbjct: 170 KDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIG 229

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
              +N+ +  +TCGPGHG+ +GSLGK+  E+ V  + + NCTI N +NGARIKTW     
Sbjct: 230 DGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHG 289

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTY----STKKKKESNWKVSNVHFKNIRGTSTTNVAV 300
           G  S I FEDI M NV +PI+I+Q Y      KK +ES  K+SN+ FKNIRGTS    A+
Sbjct: 290 GAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAI 349

Query: 301 LLECSKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPC 349
              CS   PC+ VEL DI++   G         S C   K  T G  NP PC
Sbjct: 350 KFICSGSSPCQNVELADIDIKHNGAE----PATSQCLNVKPITSGKLNPIPC 395

[Close]

BLAST of Chy8G146200.1 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.4e-79
Identity = 151/352 (42.90%), Postives = 205/352 (58.24%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           +  W  AC  +V P+  +IP+GT+L+  V   GPCK+ PI +  QGT++A  D SA+  P
Sbjct: 50  LDAWKEACA-SVTPSTVVIPKGTYLLSKVNLEGPCKA-PIEINVQGTIQAPADPSAFKDP 109

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
            W     +  F + G G+FDGQG   +  + C+       LP++I+F  + + ++  +TS
Sbjct: 110 NWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITS 169

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
            +S  FH +VF C N T   +KI AP  SPNTDG+H+  S+ V I  S I TGDDC+SIG
Sbjct: 170 KDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIG 229

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
              +N+ +  +TCGPGHG+ +GSLGK+  E+ V  + + NCTI N +NGARIKTW     
Sbjct: 230 DGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHG 289

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTY----STKKKKESNWKVSNVHFKNIRGTSTTNVAV 300
           G  S I FEDI M NV +PI+I+Q Y      KK +ES  K+SN+ FKNIRGTS    A+
Sbjct: 290 GAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAI 349

Query: 301 LLECSKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPC 349
              CS   PC+ VEL DI++   G         S C   K  T G  NP PC
Sbjct: 350 KFICSGSSPCQNVELADIDIQHNGAE----PATSQCLNVKPITIGKLNPIPC 395

[Close]

BLAST of Chy8G146200.1 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 8.3e-79
Identity = 148/349 (42.41%), Postives = 209/349 (59.89%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           M  W AAC +  GP+  LIP+G + +G V   GPCK   I  +  G VKA  D S + S 
Sbjct: 28  MKAWKAACASQ-GPSTVLIPKGNYNMGEVAMQGPCKGSKIGFQIDGVVKAPADPSKFKSD 87

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
            W S   I G  ++G+G  DGQG + W  ++C KN  C+   ++++F  L H +V  +TS
Sbjct: 88  GWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVRDITS 147

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +NS  FH +V  C + T  ++ + AP  S NTDG+H+  SK VTI N+ I TGDDC+SIG
Sbjct: 148 LNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIG 207

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
              +N+T+T V CGPGHG+ +GSLG+Y+ EK V  + VK CT     NG R+KTW +   
Sbjct: 208 PGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSPP 267

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTY----STKKKKESNWKVSNVHFKNIRGTSTTNVAV 300
           G A+ + F+D+ M NV+NP+I++Q Y       ++  S  K+SN++F NIRGTST  VAV
Sbjct: 268 GAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLSNINFNNIRGTSTGKVAV 327

Query: 301 LLECSKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNP 346
           ++ CS   PC  +++ +INLS+ G     T   S+CS  K    G Q P
Sbjct: 328 VIACSHGMPCSNMKIGEINLSYRGAGGPAT---STCSNVKPTFSGKQVP 372

[Close]

BLAST of Chy8G146200.1 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.6e-77
Identity = 155/352 (44.03%), Postives = 208/352 (59.09%), Query Frame = 0


Query: 2   TTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSPE 61
           T W  AC  +  P+  L+P+G F VG +T  GPCKS  I L+ QGT+KA  D S      
Sbjct: 8   TAWKEACA-SASPSTILVPKGNFAVGLITLEGPCKS-SIGLQLQGTLKAPADPSKIKGLG 67

Query: 62  WFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNN-LCQLLPISIKFTRLNHTIVDGLTS 121
           W ++  I    + G GVFDGQG S W  +DC KN  +C+ L ++++   + ++I+  +T+
Sbjct: 68  WINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTT 127

Query: 122 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 181
           ++S  FH +V  C N T    KI A   S NTDG+H+  S  V I N+ I TGDDC+S+G
Sbjct: 128 LDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLG 187

Query: 182 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 241
              +NI +TN+TCGPGHG+ VGSLG+Y  E+ V  + VKNCTI  + NG RIKTW     
Sbjct: 188 DGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSEP 247

Query: 242 GLASRIIFEDIVMYNVKNPIIINQTY----STKKKKESNWKVSNVHFKNIRGTSTTNVAV 301
           G AS + F+DI M +V  PI+I+Q Y        +  S+ K+S + FKNI+GTSTT  AV
Sbjct: 248 GEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEAV 307

Query: 302 LLECSKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPC 349
            L CSK FPC GVEL DI+L++ G   +     S C   K    G Q P  C
Sbjct: 308 KLVCSKSFPCNGVELADIDLTYSG---KGGPATSVCENIKPTIKGKQIPAIC 354

[Close]

BLAST of Chy8G146200.1 vs. ExPASy TrEMBL
Match: A0A0A0KMA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 7.3e-195
Identity = 334/350 (95.43%), Postives = 342/350 (97.71%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKS+PITLENQGTVKATTDISAYSSP
Sbjct: 76  MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSP 135

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFS+EDITGFILTGSGVFDGQGLSVWPY+DCKKNNLCQLLPISIKFTRLNHTIVDGLTS
Sbjct: 136 EWFSLEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 195

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           INSMGFHTSVFYCYNFTATN+KIIAPHNSPNTDGMHLSTSKLVTIANS+IGTGDDCVSIG
Sbjct: 196 INSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGTGDDCVSIG 255

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS ENITVTNVTCGPGHGL   SLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASP+S
Sbjct: 256 HSTENITVTNVTCGPGHGL---SLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVS 315

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           GLASRIIFEDIVMYNVKNPIII+QTY TKKKKESNWKVSNV FKNIRGTSTTNVAVLLEC
Sbjct: 316 GLASRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLEC 375

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 351
           SKLFPCEGVELRDINLS+GGTNLRNTTIVSSCS AKIATFGVQ PPPCVV
Sbjct: 376 SKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 422

[Close]

BLAST of Chy8G146200.1 vs. ExPASy TrEMBL
Match: A0A5A7U4W1 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00950 PE=3 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 2.1e-189
Identity = 322/350 (92.00%), Postives = 336/350 (96.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           MTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDIS YSSP
Sbjct: 108 MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 167

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQG++VWPY+DCKKN  CQLLPISIKF+RLNHTIVDGLTS
Sbjct: 168 EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 227

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +NSMGFHTSVFYCYNFTATN+KIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIG
Sbjct: 228 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 287

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS ENI VTNVTCGPGHGL VGSLGKYSKEK VY+VLVKNCTIFNATNGARIKTWAS IS
Sbjct: 288 HSTENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRIS 347

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           GLAS IIFEDIVMYNVKNPIII+QTY TKKKK SNWK+S+VHFKNIRGTSTTNVAVLLEC
Sbjct: 348 GLASGIIFEDIVMYNVKNPIIIDQTYGTKKKKVSNWKISDVHFKNIRGTSTTNVAVLLEC 407

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 351
           S+L PCEGVELRDINL++GGTNLRNTTIVSSCS AKIATFGVQNPPPCVV
Sbjct: 408 SELLPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of Chy8G146200.1 vs. ExPASy TrEMBL
Match: A0A5A7TQ89 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36913G00010 PE=3 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 2.1e-189
Identity = 322/350 (92.00%), Postives = 336/350 (96.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           MTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDIS YSSP
Sbjct: 108 MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 167

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQG++VWPY+DCKKN  CQLLPISIKF+RLNHTIVDGLTS
Sbjct: 168 EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 227

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +NSMGFHTSVFYCYNFTATN+KIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIG
Sbjct: 228 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 287

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS ENI VTNVTCGPGHGL VGSLGKYSKEK VY+VLVKNCTIFNATNGARIKTWAS IS
Sbjct: 288 HSTENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRIS 347

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           GLAS IIFEDIVMYNVKNPIII+QTY TKKKK SNWK+S+VHFKNIRGTSTTNVAVLLEC
Sbjct: 348 GLASGIIFEDIVMYNVKNPIIIDQTYGTKKKKVSNWKISDVHFKNIRGTSTTNVAVLLEC 407

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 351
           S+L PCEGVELRDINL++GGTNLRNTTIVSSCS AKIATFGVQNPPPCVV
Sbjct: 408 SELLPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of Chy8G146200.1 vs. ExPASy TrEMBL
Match: A0A5A7U0D6 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold670G00070 PE=3 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 6.0e-189
Identity = 321/350 (91.71%), Postives = 335/350 (95.71%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           MTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDIS YSSP
Sbjct: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQG++VWPY+DCKKN  CQLLPISIKF+RLNHTIVDGLTS
Sbjct: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +NSMGFHTSVFYCYNFTATN+KIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIG
Sbjct: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS ENI VTNVTCGPGHGL VGSLGKYSKEK VY+VLVKNCTIFNATNGARIKTWAS IS
Sbjct: 181 HSTENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRIS 240

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           GLAS IIFEDIVMYNVKNPIII+QTY TKKKK SNWK+S+VHFKNIRGTSTTNVAVLLEC
Sbjct: 241 GLASGIIFEDIVMYNVKNPIIIDQTYGTKKKKVSNWKISDVHFKNIRGTSTTNVAVLLEC 300

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 351
           S+L PCEGVELRDINL++GGTNLRNTTIVSSCS AKI TFGVQNPPPCVV
Sbjct: 301 SELLPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIVTFGVQNPPPCVV 350

[Close]

BLAST of Chy8G146200.1 vs. ExPASy TrEMBL
Match: A0A5D3C9J8 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00530 PE=3 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 4.6e-173
Identity = 296/350 (84.57%), Postives = 320/350 (91.43%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           +TTWI ACRNTVGPAK LIP+GT+LVGPVT AGPCKSFPITLENQGTVKATTDIS YSSP
Sbjct: 107 VTTWIEACRNTVGPAKILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQYSSP 166

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQG++ WPY+DCK NN+CQLLPISIKF+RLN TIVD LTS
Sbjct: 167 EWFSIEDITGFILTGSGVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDRLTS 226

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +NS GFH S+F CYNFTATNI IIAPH+SPNTDG+HLSTSKLV IANS+IGTGDDCVSIG
Sbjct: 227 LNSKGFHMSLFSCYNFTATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCVSIG 286

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS E ITVTNVTCGPGHGL VGSLGKY +EK VYDVLVKNCTIFNATNGARIKT+ASPIS
Sbjct: 287 HSTEKITVTNVTCGPGHGLSVGSLGKYPEEKDVYDVLVKNCTIFNATNGARIKTFASPIS 346

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           G AS IIFEDIVMYNVK PIII+QTY T + KES WKVS+VHFKNIRGTS TNVAVLL+C
Sbjct: 347 GSASGIIFEDIVMYNVKYPIIIDQTYDTNENKESKWKVSDVHFKNIRGTSATNVAVLLDC 406

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 351
           SKL PCEGVELRDI+L++GGT+L+NTTIVSSCS AKI TFGVQNPPPC V
Sbjct: 407 SKLLPCEGVELRDIDLTYGGTDLKNTTIVSSCSNAKITTFGVQNPPPCDV 456

[Close]

BLAST of Chy8G146200.1 vs. NCBI nr
Match: XP_031745094.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 704 bits (1816), Expect = 5.10e-254
Identity = 339/350 (96.86%), Postives = 345/350 (98.57%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP
Sbjct: 104 MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 163

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQGLSVWPY+DCKKNNLCQLLPISIKFTRLNHTIVDGLTS
Sbjct: 164 EWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 223

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +NSMGFHTSVFYCYNFTATN+KIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG
Sbjct: 224 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 283

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS ENITVTNVTCGPGHGL VGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASP+S
Sbjct: 284 HSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVS 343

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           GLASRIIFEDIVMYNVKNPIII+QTY TKKKKESNWKVSNV FKNIRGTSTTNVAVLLEC
Sbjct: 344 GLASRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLEC 403

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 350
           SKLFPCEGVELRDINLS+GGTNLRNTTIVSSCS AKIATFGVQNPPPCVV
Sbjct: 404 SKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 453

[Close]

BLAST of Chy8G146200.1 vs. NCBI nr
Match: XP_031741281.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 697 bits (1798), Expect = 2.82e-251
Identity = 338/350 (96.57%), Postives = 343/350 (98.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKS+PITLENQGTVKATTDISAYSSP
Sbjct: 104 MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSP 163

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQGLSVWPY+DCKKNNLCQLLPISIKFTRLNHTIVDGLTS
Sbjct: 164 EWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 223

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           INSMGFHTSVFYCYNFTATN+KIIAPHNSPNTDG HLSTSKLVTIANSVIGTGDDCVSIG
Sbjct: 224 INSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGTHLSTSKLVTIANSVIGTGDDCVSIG 283

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS ENITVTNVTCGPGHGL VGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWAS IS
Sbjct: 284 HSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASRIS 343

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           GLASRIIFEDIVMYNVKNPIII+QTYSTKKKKESNWKVSNV FKNIRGTSTTNVAVLLEC
Sbjct: 344 GLASRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLEC 403

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 350
           SKLFPCEGVELRDINLS+GGTNLRNTTIVSSCS AKIATFGVQ PPPCVV
Sbjct: 404 SKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 453

[Close]

BLAST of Chy8G146200.1 vs. NCBI nr
Match: XP_031745103.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 687 bits (1772), Expect = 1.49e-246
Identity = 330/350 (94.29%), Postives = 340/350 (97.14%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           MTTWIAACRNTVGP KFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP
Sbjct: 152 MTTWIAACRNTVGPTKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 211

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFS+EDITGFILTGSGVFDGQGLSVW Y+DCKKNNLCQ LPISIKFTRLNHTIVDGLTS
Sbjct: 212 EWFSLEDITGFILTGSGVFDGQGLSVWAYNDCKKNNLCQPLPISIKFTRLNHTIVDGLTS 271

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           INSMGFHTSVFYCYNFTATN+KIIAPHNSPNTDGMHLSTSKLVTIANS+IGTGDDCVSIG
Sbjct: 272 INSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGTGDDCVSIG 331

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS ENIT+TNVTCGPGHGL VGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS
Sbjct: 332 HSTENITITNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 391

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           GLASRIIFEDIVMY VKNPIII+QTY TKK +ESNWKVSNV FKNIRGTSTTNVAVLLEC
Sbjct: 392 GLASRIIFEDIVMYGVKNPIIIDQTYGTKKSEESNWKVSNVQFKNIRGTSTTNVAVLLEC 451

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 350
           SKLFPCEGVELRDINLS+GG+NLRN+TIVSSCS AKIATFGVQNPPPCVV
Sbjct: 452 SKLFPCEGVELRDINLSYGGSNLRNSTIVSSCSNAKIATFGVQNPPPCVV 501

[Close]

BLAST of Chy8G146200.1 vs. NCBI nr
Match: KAA0048658.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 671 bits (1731), Expect = 9.86e-243
Identity = 321/350 (91.71%), Postives = 335/350 (95.71%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           MTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDIS YSSP
Sbjct: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQG++VWPY+DCKKN  CQLLPISIKF+RLNHTIVDGLTS
Sbjct: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +NSMGFHTSVFYCYNFTATN+KIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIG
Sbjct: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS ENI VTNVTCGPGHGL VGSLGKYSKEK VY+VLVKNCTIFNATNGARIKTWAS IS
Sbjct: 181 HSTENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRIS 240

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           GLAS IIFEDIVMYNVKNPIII+QTY TKKKK SNWK+S+VHFKNIRGTSTTNVAVLLEC
Sbjct: 241 GLASGIIFEDIVMYNVKNPIIIDQTYGTKKKKVSNWKISDVHFKNIRGTSTTNVAVLLEC 300

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 350
           S+L PCEGVELRDINL++GGTNLRNTTIVSSCS AKI TFGVQNPPPCVV
Sbjct: 301 SELLPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIVTFGVQNPPPCVV 350

[Close]

BLAST of Chy8G146200.1 vs. NCBI nr
Match: KAA0048661.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK18163.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 672 bits (1735), Expect = 1.28e-241
Identity = 322/350 (92.00%), Postives = 336/350 (96.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           MTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDIS YSSP
Sbjct: 108 MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 167

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQG++VWPY+DCKKN  CQLLPISIKF+RLNHTIVDGLTS
Sbjct: 168 EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 227

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +NSMGFHTSVFYCYNFTATN+KIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIG
Sbjct: 228 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 287

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
           HS ENI VTNVTCGPGHGL VGSLGKYSKEK VY+VLVKNCTIFNATNGARIKTWAS IS
Sbjct: 288 HSTENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRIS 347

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
           GLAS IIFEDIVMYNVKNPIII+QTY TKKKK SNWK+S+VHFKNIRGTSTTNVAVLLEC
Sbjct: 348 GLASGIIFEDIVMYNVKNPIIIDQTYGTKKKKVSNWKISDVHFKNIRGTSTTNVAVLLEC 407

Query: 301 SKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPCVV 350
           S+L PCEGVELRDINL++GGTNLRNTTIVSSCS AKIATFGVQNPPPCVV
Sbjct: 408 SELLPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of Chy8G146200.1 vs. TAIR 10
Match: AT1G02790.1 (polygalacturonase 4 )

HSP 1 Score: 306.6 bits (784), Expect = 2.6e-83
Identity = 154/320 (48.12%), Postives = 204/320 (63.75%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           + TWI  C + V PA  L+P+GTFL GPV FAGPCKS  +T+   GT+ ATT  S Y++P
Sbjct: 72  LNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAGPCKS-KVTVNVIGTIIATT--SGYATP 131

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           EWF  E +   +LTG+G F G+G +VW  D C K   C L P S+KF  + +  ++G++S
Sbjct: 132 EWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISS 191

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           +N+  FH  +    N    NIK+ AP  SPNTDG+HLS +  V+I +S I TGDDCVS+G
Sbjct: 192 VNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVG 251

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPIS 240
               N+TV  V CGPGHGL VGSLGKY  E+ V  + V NCT+    NG RIKTW     
Sbjct: 252 RGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDP 311

Query: 241 GLASRIIFEDIVMYNVKNPIIINQTYSTKKKKESNWKVSNVHFKNIRGTSTTNVAVLLEC 300
             A  I FE+I+M +VKNPIII+Q Y + +  +S   +S++ FKNIRGT+ T   V + C
Sbjct: 312 SKAVDIKFENIIMQSVKNPIIIDQNYGS-RGGDSQVAISDILFKNIRGTTITKDVVQIMC 371

Query: 301 SKLFPCEGVELRDINLSFGG 321
           SK  PC+GV + D+NL + G
Sbjct: 372 SKSVPCQGVNVVDVNLDYVG 386

[Close]

BLAST of Chy8G146200.1 vs. TAIR 10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 302.8 bits (774), Expect = 3.7e-82
Identity = 161/363 (44.35%), Postives = 222/363 (61.16%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFP-ITLENQGTVKATTDISAY-S 60
           +  W  AC+++      +IP+G F VG + F+GPC +   +T+     VKA+TD+S Y S
Sbjct: 55  VAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNLTVR----VKASTDLSKYRS 114

Query: 61  SPEWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGL 120
              W     I G  LTG G FDGQG   WP+++C  ++ C+LLP S+KF  +N T+V  +
Sbjct: 115 GGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRI 174

Query: 121 TSINSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVS 180
           +S+NS  FH ++  C +F  T + I AP +SPNTDG+H+  S  V  + S I TGDDCVS
Sbjct: 175 SSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVS 234

Query: 181 IGHSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWA-S 240
           IG     IT+T++ CGPGHG+ VGSLG+Y  EK V  ++VK+C I   TNG RIKTWA S
Sbjct: 235 IGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWANS 294

Query: 241 PISGLASRIIFEDIVMYNVKNPIIINQTY----STKKKKESNWKVSNVHFKNIRGTSTTN 300
           P    A+ + FE+I+M NV NPIII+Q+Y    S      S  ++S ++FKNIRGTS++ 
Sbjct: 295 PGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYFKNIRGTSSSL 354

Query: 301 VAVLLECSKLFPCEGVELRDINL----SFGG----TNLRNTTIVSSCSYAKIATFGVQNP 349
           VAV L CS+  PC+ V L +++L    S GG    +N  N  + SSC   +    G Q P
Sbjct: 355 VAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSNRGNEAVSSSCRNVRANYIGTQIP 413

[Close]

BLAST of Chy8G146200.1 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 285.4 bits (729), Expect = 6.1e-77
Identity = 154/353 (43.63%), Postives = 215/353 (60.91%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           +  + +AC+++  P+K +IP+G F +G +   GPCK+ PI +  QGTVKA  + +     
Sbjct: 40  LKAFTSACQSS-SPSKVVIPKGEFKLGEIEMRGPCKA-PIEVTLQGTVKADGN-AIQGKE 99

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           +W    +I GF L G G FDG+G + W  ++C K   C+ LPISI+F  + ++ +  ++S
Sbjct: 100 KWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISS 159

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           I++  FH +V    N T  NIKI+AP +SPNTDG+HL  S  V I NS I TGDDC+S+G
Sbjct: 160 IDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVG 219

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWAS-PI 240
             ++N+ V  VTCGPGHG+ VGSLG+Y  E+ V  + V NCT+    NG RIKTW S   
Sbjct: 220 DGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAAC 279

Query: 241 SGLASRIIFEDIVMYNVKNPIIINQTY----STKKKKESNWKVSNVHFKNIRGTSTTNVA 300
           S  AS I FEDI++ +V NPI+I+Q Y       K+K S  K+ N+ FKNIRGTS    A
Sbjct: 280 STTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDA 339

Query: 301 VLLECSKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPC 349
           V L CSK +PC+ VE+ DI++ + G +   T     CS       G Q+P  C
Sbjct: 340 VKLLCSKGYPCQNVEIGDIDIKYNGADGPAT---FHCSNVSPKILGSQSPKAC 386

[Close]

BLAST of Chy8G146200.1 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 278.5 bits (711), Expect = 7.5e-75
Identity = 151/353 (42.78%), Postives = 212/353 (60.06%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 60
           +  +  AC++   P K +IP+G F +G +  +GPCKS P+ +   GTV A  + S +   
Sbjct: 41  LRAFTTACQSPT-PRKVVIPKGQFKLGEIMMSGPCKS-PVEITLLGTVLADGN-SIHGKE 100

Query: 61  EWFSIEDITGFILTGSGVFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 120
           +W   + + GF L G G FDG+G + W  ++C K   C+ LPISI+F  + +  +  ++S
Sbjct: 101 KWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISS 160

Query: 121 INSMGFHTSVFYCYNFTATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 180
           I++  FH +V    N T  N+KI+AP  SPNTDG+HL  S  V+I NS I TGDDCVS+G
Sbjct: 161 IDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVG 220

Query: 181 HSIENITVTNVTCGPGHGLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWAS-PI 240
             + N+ V NV CGPGHG+ VGSLG+Y  E+ V  + V NCT+    NG RIKTW S   
Sbjct: 221 DGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAAC 280

Query: 241 SGLASRIIFEDIVMYNVKNPIIINQTY----STKKKKESNWKVSNVHFKNIRGTSTTNVA 300
           S  AS I FE+I++ NV NPI+I+Q Y       K+K S+ K++N+ F+ IRGTS    A
Sbjct: 281 STTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDA 340

Query: 301 VLLECSKLFPCEGVELRDINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPC 349
           V L CSK +PCE V++ DIN+ + G +   T +   CS  +    G Q P  C
Sbjct: 341 VKLLCSKGYPCENVQVGDINIQYTGADGPATFM---CSNVRPKLVGTQFPKAC 387

[Close]

BLAST of Chy8G146200.1 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 276.9 bits (707), Expect = 2.2e-74
Identity = 147/336 (43.75%), Postives = 204/336 (60.71%), Query Frame = 0


Query: 18  LIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSPEWFSIEDITGFILTGSG 77
           +IP+G + +G +   GPCK+ PI +   GTVKA  D +A    +W +  +I GF L G G
Sbjct: 57  MIPKGEYKLGEIVMMGPCKA-PIRIALLGTVKA--DGNANGKEKWVAFRNINGFKLNGGG 116

Query: 78  VFDGQGLSVWPYDDCKKNNLCQLLPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFT 137
           VFDG+G + W  ++C K   C+ LPISI+F  +    + G+TS+++  FH +V    N T
Sbjct: 117 VFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVT 176

Query: 138 ATNIKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSIENITVTNVTCGPGH 197
             ++KIIAP  SPNTDG+H+  S  + I NS I TGDDCVS+G  ++N+ V  VTCGPGH
Sbjct: 177 FEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGH 236

Query: 198 GLRVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWAS-PISGLASRIIFEDIVMYNV 257
           G+ +GSLG+YS E+ V  + + NCT+    NG RIKTW S   +  AS I FE+I++ NV
Sbjct: 237 GISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNV 296

Query: 258 KNPIIINQTY----STKKKKESNWKVSNVHFKNIRGTSTTNVAVLLECSKLFPCEGVELR 317
            NPI+I+Q Y       K+K S  K++N+ FK IRGTS    AV L CSK +PC+ VE+ 
Sbjct: 297 SNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVG 356

Query: 318 DINLSFGGTNLRNTTIVSSCSYAKIATFGVQNPPPC 349
           D+N+ + G +   T     CS       G Q P  C
Sbjct: 357 DVNIQYTGADGPAT---FQCSNVSPKLVGTQIPKAC 386

The following BLAST results are available for this feature:

BLAST of Chy8G146200.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49062	3.6e-82	48.13	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 ...	[more]
Q39786	4.9e-79	43.18	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	6.4e-79	42.90	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q6H9K0	8.3e-79	42.41	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P24548	1.6e-77	44.03	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]

BLAST of Chy8G146200.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMA6	7.3e-195	95.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1	[more]
A0A5A7U4W1	2.1e-189	92.00	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TQ89	2.1e-189	92.00	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5A7U0D6	6.0e-189	91.71	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3C9J8	4.6e-173	84.57	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Chy8G146200.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745094.1	5.10e-254	96.86	exopolygalacturonase-like [Cucumis sativus]	[more]
XP_031741281.1	2.82e-251	96.57	exopolygalacturonase [Cucumis sativus]	[more]
XP_031745103.1	1.49e-246	94.29	exopolygalacturonase-like [Cucumis sativus]	[more]
KAA0048658.1	9.86e-243	91.71	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
KAA0048661.1	1.28e-241	92.00	exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalact...	[more]

BLAST of Chy8G146200.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02790.1	2.6e-83	48.13	polygalacturonase 4	[more]
AT4G18180.1	3.7e-82	44.35	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	6.1e-77	43.63	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	7.5e-75	42.78	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	2.2e-74	43.75	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 183..203 e-value: 5000.0 score: 2.2 coord: 243..264 e-value: 2300.0 score: 4.6 coord: 213..234 e-value: 10.0 score: 15.1 coord: 160..181 e-value: 1100.0 score: 6.8 coord: 278..300 e-value: 8800.0 score: 0.5 coord: 133..159 e-value: 3700.0 score: 3.1
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 2..346 e-value: 6.1E-93 score: 314.0
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 12..326 e-value: 1.6E-87 score: 293.7
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 190..203
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..344
None	No IPR available	PANTHER	PTHR31375:SF158	POLYGALACTURONASE	coord: 1..344
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 5..349

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy8G146200	Chy8G146200	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy8G146200.1.exon1	Chy8G146200.1.exon1	exon
Chy8G146200.1.exon2	Chy8G146200.1.exon2	exon
Chy8G146200.1.exon3	Chy8G146200.1.exon3	exon
Chy8G146200.1.exon4	Chy8G146200.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy8G146200.1.cds1	Chy8G146200.1.cds1	CDS
Chy8G146200.1.cds2	Chy8G146200.1.cds2	CDS
Chy8G146200.1.cds3	Chy8G146200.1.cds3	CDS
Chy8G146200.1.cds4	Chy8G146200.1.cds4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy8G146200.1	Chy8G146200.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity