Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCATCCATTAGTGGACGGGTTGCTTATAGGGAGTCATCATCTGTGATACCACACATCATGTGGTGAAGTTGCACACACTCACTTGGGTTGAAGGTGATTAAGTTCTCTTCAGATTGCAAATGGTACGTTAAGATTCATCTTCTTCCTCCACATTCACTCTAGTATTCTAGGGTTTAGTCTCTTAATTAGCACTAGTTAATGTTCCATTTTCAGGCTCGAATACATGAGATTGAACCTACGAATGAGGAGTGTAATAGGAGTATTGAAATTCCTATGATGGAAGGTTACAAGGAAGACCTGCATGTCTTTCATCCTCATCACTTCGAGGATGCCCTACCATGCACTCACGTCGACAATCCCCCTCATCCTTCTCATGTGGACCATCCCTCTTCTTCTCCTCATCACATGGACCATCCCCCTCCTCCTTCTGCCCAACCTCCCTGGGTGACGTGTGATTGCAACCAATATGTATGTTGCATGGAAGGGACATTAGAACAGATAGAGGAGTCTTTACAATGAATGGAGTCATCTATGTCATCTGTGTTAGTTGAGCCGTCGTTCGTGTTTGCCGAGTTGTCGACCATAAAGGAGCTTCTGATGGCATTGGTTAAGGTATTACTATTAATTACTTGGAACATTTAATTTTTTTTGTCTTAGTTAAGTATTAGTCGTCACTTATGTTTCTACTACTTCCATAATAGGGTAACGCAGTTGACTCCCAACCATGCTACGACGATAGTGAAGGTATACGTCGTTCAATGCACCAGAGGCTCAAACTTTTGTTGGTGAGGCATTCGTGGATGTTCTCACTATGGACATTGATGGCCAACCCTGCTGATGAGGAGATGGAAACATCCGTCAGTGATGACCTCGGGGATGGTATCATACCCATCAATATACCATCGGGGGGTGAGGATGTGCCACCACTGCCTTTCCAACCCATGTTAG mRNA sequence ATGTCATCCATTAGTGGACGGGTTGCTTATAGGGAGTCATCATCTGTGATACCACACATCATGTGGTGAAGTTGCACACACTCACTTGGGTTGAAGGTGATTAAGTTCTCTTCAGATTGCAAATGGCTCGAATACATGAGATTGAACCTACGAATGAGGAGTGTAATAGGAGTATTGAAATTCCTATGATGGAAGGTTACAAGGAAGACCTGCATGTCTTTCATCCTCATCACTTCGAGGATGCCCTACCATGCACTCACGGTAACGCAGTTGACTCCCAACCATGCTACGACGATAGTGAAGGTATACGTCGTTCAATGCACCAGAGGCTCAAACTTTTGTTGGTGAGGCATTCGTGGATGTTCTCACTATGGACATTGATGGCCAACCCTGCTGATGAGGAGATGGAAACATCCGTCAGTGATGACCTCGGGGATGGTATCATACCCATCAATATACCATCGGGGGGTGAGGATGTGCCACCACTGCCTTTCCAACCCATGTTAG Coding sequence (CDS) ATGTCATCCATTAGTGGACGGGTTGCTTATAGGGAGTCATCATCTGTGATACCACACATCATGTGGTGAAGTTGCACACACTCACTTGGGTTGAAGGTGATTAAGTTCTCTTCAGATTGCAAATGGCTCGAATACATGAGATTGAACCTACGAATGAGGAGTGTAATAGGAGTATTGAAATTCCTATGATGGAAGGTTACAAGGAAGACCTGCATGTCTTTCATCCTCATCACTTCGAGGATGCCCTACCATGCACTCACGGTAACGCAGTTGACTCCCAACCATGCTACGACGATAGTGAAGGTATACGTCGTTCAATGCACCAGAGGCTCAAACTTTTGTTGGTGAGGCATTCGTGGATGTTCTCACTATGGACATTGATGGCCAACCCTGCTGATGAGGAGATGGAAACATCCGTCAGTGATGACCTCGGGGATGGTATCATACCCATCAATATACCATCGGGGGGTGAGGATGTGCCACCACTGCCTTTCCAACCCATGTTAG Protein sequence MSSISGRVAYRESSSVIPHIMW*SCTHSLGLKVIKFSSDCKWLEYMRLNLRMRSVIGVLKFL*WKVTRKTCMSFILITSRMPYHALTVTQLTPNHATTIVKVYVVQCTRGSNFCW*GIRGCSHYGH*WPTLLMRRWKHPSVMTSGMVSYPSIYHRGVRMCHHCLSNPC*
Homology
BLAST of Chy7G136870.1 vs. NCBI nr
Match: KAA0035466.1 (hypothetical protein E6C27_scaffold285G001130 [Cucumis melo var. makuwa] >TYK31059.1 hypothetical protein E5676_scaffold455G003170 [Cucumis melo var. makuwa]) HSP 1 Score: 48.5 bits (114), Expect = 8.68e-04 Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0
Query: 1 MSSISGRVAYRESSSVIPHIMW*SCTHSLGLKVIK 35
+SSISG V +R+SSS+IP IM SCTHSLGLK ++
Sbjct: 41 ISSISGPVLHRDSSSMIPRIMQWSCTHSLGLKSLE 75
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0035466.1 | 8.68e-04 | 65.71 | hypothetical protein E6C27_scaffold285G001130 [Cucumis melo var. makuwa] >TYK310... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy7G136870.1.exon1 | Chy7G136870.1.exon1 | exon |
| Chy7G136870.1.exon2 | Chy7G136870.1.exon2 | exon |
| Chy7G136870.1.exon3 | Chy7G136870.1.exon3 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy7G136870.1.cds1 | Chy7G136870.1.cds1 | CDS |
| Chy7G136870.1.cds2 | Chy7G136870.1.cds2 | CDS |
| Chy7G136870.1.cds3 | Chy7G136870.1.cds3 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy7G136870.1 | Chy7G136870.1-protein | polypeptide |
|
