Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGAAATACAAGAGGATATGAGAAAATCATCAGAAGATAGATCTGAACTAACCCTAGAGGCAATTATTTATGAACGGATTTTGGAAAAACGTTCAGGTAATACTACATGTCTTAGATGGAAGCCAACCCCTAATGTAGCAACATGTGGTACATCGACCTATGTGTTTGAGAAAGATATTAGGGATAAGTATGAAAAGCTTCAAGTAGAGGTGAAAGACTTAAAGGAGAAAAATGTCATGTTGAAGCTAAGTCAACAATTTCGGGTTTTCAAGATCAATTGA
TTGGAAATACAAGAGGATATGAGAAAATCATCAGAAGATAGATCTGAACTAACCCTAGAGGCAATTATTTATGAACGGATTTTGGAAAAACGTTCAGGTAATACTACATGTCTTAGATGGAAGCCAACCCCTAATGTAGCAACATGTGGTACATCGACCTATGTGTTTGAGAAAGATATTAGGGATAAGTATGAAAAGCTTCAAGTAGAGGTGAAAGACTTAAAGGAGAAAAATGTCATGTTGAAGCTAAGTCAACAATTTCGGGTTTTCAAGATCAATTGA
TTGGAAATACAAGAGGATATGAGAAAATCATCAGAAGATAGATCTGAACTAACCCTAGAGGCAATTATTTATGAACGGATTTTGGAAAAACGTTCAGGTAATACTACATGTCTTAGATGGAAGCCAACCCCTAATGTAGCAACATGTGGTACATCGACCTATGTGTTTGAGAAAGATATTAGGGATAAGTATGAAAAGCTTCAAGTAGAGGTGAAAGACTTAAAGGAGAAAAATGTCATGTTGAAGCTAAGTCAACAATTTCGGGTTTTCAAGATCAATTGA
LEIQEDMRKSSEDRSELTLEAIIYERILEKRSGNTTCLRWKPTPNVATCGTSTYVFEKDIRDKYEKLQVEVKDLKEKNVMLKLSQQFRVFKIN*
Homology
BLAST of Chy6G121050.1 vs. ExPASy TrEMBL
Match:
A0A5A7UKB8 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001590 PE=4 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 5.6e-17
Identity = 51/76 (67.11%), Postives = 64/76 (84.21%), Query Frame = 0
BLAST of Chy6G121050.1 vs. NCBI nr
Match:
KAA0055007.1 (uncharacterized protein E6C27_scaffold43052G001590 [Cucumis melo var. makuwa])
HSP 1 Score: 95.9 bits (237), Expect = 3.35e-21
Identity = 51/76 (67.11%), Postives = 64/76 (84.21%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5A7UKB8 5.6e-17 67.11 DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match Name E-value Identity Description
KAA0055007.1 3.35e-21 67.11 uncharacterized protein E6C27_scaffold43052G001590 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
T T G G A A A T A C A A G A G G A T A T G A G A A A A T C A T C A G A A G A T A G A T C T G A A C T A A C C C T A G A G G C A A T T A T T T A T G A A C G G A T T T T G G A A A A A C G T T C A G G T A A T A C T A C A T G T C T T A G A T G G A A G C C A A C C C C T A A T G T A G C A A C A T G T G G T A C A T C G A C C T A T G T G T T T G A G A A A G A T A T T A G G G A T A A G T A T G A A A A G C T T C A A G T A G A G G T G A A A G A C T T A A A G G A G A A A A A T G T C A T G T T G A A G C T A A G T C A A C A A T T T C G G G T T T T C A A G A T C A A T T G A 20 40 60 80 100 120 140 160 180 200 220 240 260 280 Score = Sequence Coil
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 57..84
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Type
Chy6G121050.1.exon1 Chy6G121050.1.exon1 exon
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Type
Chy6G121050.1.cds1 Chy6G121050.1.cds1 CDS
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Type
Chy6G121050.1 Chy6G121050.1-protein polypeptide
