Chy6G120630.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy6G120630.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein transport protein Sec61 subunit gamma
Location	chrH06: 16993379 .. 16993670 (-)
Sequence length	210
RNA-Seq Expression	Chy6G120630.1
Synteny	Chy6G120630.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCATTGATTCTGTCTTCGACCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGGTACAGTTTCCGAATCCCTTTTCATCTCTTTGTTTTCATAGATCTTGTAACCAATTTCCTCTGTTTTGCGTGATTTGTGTAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAG

mRNA sequence

ATGGACGCCATTGATTCTGTCTTCGACCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAG

Coding sequence (CDS)

ATGGACGCCATTGATTCTGTCTTCGACCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAG

Protein sequence

MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG*

Homology

[Close]

BLAST of Chy6G120630.1 vs. ExPASy Swiss-Prot
Match: P38385 (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-30
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSV DPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. ExPASy Swiss-Prot
Match: P0DI74 (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-29
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of Chy6G120630.1 vs. ExPASy Swiss-Prot
Match: P0DI75 (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-29
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of Chy6G120630.1 vs. ExPASy Swiss-Prot
Match: Q9SMP2 (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-28
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of Chy6G120630.1 vs. ExPASy Swiss-Prot
Match: Q7Z1B8 (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=213494 GN=SEC61G PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.1e-22
Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MD +    +P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IP
Sbjct: 1  MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of Chy6G120630.1 vs. ExPASy TrEMBL
Match: A0A1U8ISF2 (protein transport protein Sec61 subunit gamma OS=Gossypium hirsutum OX=3635 GN=LOC107899725 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. ExPASy TrEMBL
Match: A0A5D2CZA3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G091500v1 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. ExPASy TrEMBL
Match: A0A0D2TL23 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G086400 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. ExPASy TrEMBL
Match: A0A5D2VBP1 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G086100v1 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. ExPASy TrEMBL
Match: A0A6J1J2N1 (protein transport protein Sec61 subunit gamma-like OS=Cucurbita maxima OX=3661 GN=LOC111482125 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. NCBI nr
Match: XP_004145664.1 (protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_008450108.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Cucumis melo] >XP_012460780.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_012460781.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_012460782.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_016681000.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_016681001.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_022156520.1 protein transport protein Sec61 subunit gamma [Momordica charantia] >XP_022934076.1 protein transport protein Sec61 subunit gamma-like [Cucurbita moschata] >XP_022983556.1 protein transport protein Sec61 subunit gamma-like [Cucurbita maxima] >XP_023526351.1 protein transport protein Sec61 subunit gamma-like [Cucurbita pepo subsp. pepo] >XP_038876188.1 protein transport protein Sec61 subunit gamma-like [Benincasa hispida] >KAA3464170.1 protein transport protein Sec61 subunit gamma [Gossypium australe] >KAB2034429.1 hypothetical protein ES319_D04G085300v1 [Gossypium barbadense] >KAG6581101.1 Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017832.1 Protein transport protein Sec61 subunit gamma [Cucurbita argyrosperma subsp. argyrosperma] >MBA0572089.1 hypothetical protein [Gossypium lobatum] >MBA0630508.1 hypothetical protein [Gossypium davidsonii] >MBA0666224.1 hypothetical protein [Gossypium klotzschianum] >MBA0750649.1 hypothetical protein [Gossypium gossypioides] >MBA0842256.1 hypothetical protein [Gossypium armourianum] >MBA0872547.1 hypothetical protein [Gossypium schwendimanii] >TYG73313.1 hypothetical protein ES288_D04G091500v1 [Gossypium darwinii] >TYH76504.1 hypothetical protein ES332_D04G091100v1 [Gossypium tomentosum] >TYI86738.1 hypothetical protein E1A91_D04G086100v1 [Gossypium mustelinum])

HSP 1 Score: 135 bits (340), Expect = 7.06e-40
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 69
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. NCBI nr
Match: XP_028063760.1 (protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063762.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063763.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063764.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063765.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063766.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063767.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099424.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099425.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099426.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099427.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099428.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099430.1 protein transport protein Sec61 subunit gamma [Camellia sinensis])

HSP 1 Score: 134 bits (338), Expect = 1.43e-39
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDALDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 69
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. NCBI nr
Match: XP_012489479.1 (PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_012489480.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_012489481.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_016686809.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_016695151.1 protein transport protein Sec61 subunit gamma-like [Gossypium hirsutum] >XP_016695152.1 protein transport protein Sec61 subunit gamma-like [Gossypium hirsutum] >KAB2002517.1 hypothetical protein ES319_D11G071700v1 [Gossypium barbadense] >TYG44137.1 hypothetical protein ES288_D11G074400v1 [Gossypium darwinii] >TYH42588.1 hypothetical protein ES332_D11G073800v1 [Gossypium tomentosum] >TYI54418.1 hypothetical protein E1A91_D11G073600v1 [Gossypium mustelinum] >KAB2002518.1 hypothetical protein ES319_D11G071700v1 [Gossypium barbadense])

HSP 1 Score: 134 bits (337), Expect = 2.03e-39
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVALRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 69
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. NCBI nr
Match: XP_008231108.1 (PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_016649155.1 PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_021823017.1 protein transport protein Sec61 subunit gamma [Prunus avium] >XP_038698211.1 protein transport protein Sec61 subunit gamma isoform X2 [Tripterygium wilfordii] >PQP94489.1 uncharacterized protein Pyn_35397 [Prunus yedoensis var. nudiflora] >CAB4275454.1 unnamed protein product [Prunus armeniaca] >PQP96178.1 uncharacterized protein Pyn_36215 [Prunus yedoensis var. nudiflora] >CAB4305825.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 134 bits (337), Expect = 2.03e-39
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 69
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. NCBI nr
Match: XP_012445899.1 (PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >KJB11635.1 hypothetical protein B456_001G271600 [Gossypium raimondii])

HSP 1 Score: 134 bits (336), Expect = 2.88e-39
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTA+GFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVALRTAVGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 69
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of Chy6G120630.1 vs. TAIR 10
Match: AT4G24920.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 129.8 bits (325), Expect = 8.6e-31
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of Chy6G120630.1 vs. TAIR 10
Match: AT5G50460.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 129.8 bits (325), Expect = 8.6e-31
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of Chy6G120630.1 vs. TAIR 10
Match: AT3G48570.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 124.4 bits (311), Expect = 3.6e-29
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

The following BLAST results are available for this feature:

BLAST of Chy6G120630.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38385	1.4e-30	95.65	Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX...	[more]
P0DI74	1.2e-29	94.12	Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0DI75	1.2e-29	94.12	Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SMP2	5.1e-28	89.71	Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q7Z1B8	7.1e-22	73.53	Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=21349...	[more]

BLAST of Chy6G120630.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U8ISF2	2.1e-29	100.00	protein transport protein Sec61 subunit gamma OS=Gossypium hirsutum OX=3635 GN=L...	[more]
A0A5D2CZA3	2.1e-29	100.00	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G091500v1 PE=...	[more]
A0A0D2TL23	2.1e-29	100.00	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G086400 PE=3 ...	[more]
A0A5D2VBP1	2.1e-29	100.00	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G086100v1 P...	[more]
A0A6J1J2N1	2.1e-29	100.00	protein transport protein Sec61 subunit gamma-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Chy6G120630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145664.1	7.06e-40	100.00	protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_008450108.1 ...	[more]
XP_028063760.1	1.43e-39	98.55	protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063762....	[more]
XP_012489479.1	2.03e-39	98.55	PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimond...	[more]
XP_008231108.1	2.03e-39	98.55	PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_01664...	[more]
XP_012445899.1	2.88e-39	97.10	PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimond...	[more]

BLAST of Chy6G120630.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24920.1	8.6e-31	94.12	secE/sec61-gamma protein transport protein	[more]
AT5G50460.1	8.6e-31	94.12	secE/sec61-gamma protein transport protein	[more]
AT3G48570.1	3.6e-29	89.71	secE/sec61-gamma protein transport protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023391	Protein translocase SecE domain superfamily	GENE3D	1.20.5.820	Preprotein translocase SecE subunit	coord: 7..68 e-value: 1.3E-31 score: 110.0
IPR023391	Protein translocase SecE domain superfamily	SUPERFAMILY	103456	Preprotein translocase SecE subunit	coord: 5..65
IPR008158	Protein translocase SEC61 complex, gamma subunit	TIGRFAM	TIGR00327	TIGR00327	coord: 11..66 e-value: 1.8E-16 score: 57.7
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 13..65 e-value: 1.2E-14 score: 54.0
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PROSITE	PS01067	SECE_SEC61G	coord: 14..42
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	HAMAP	MF_00422	SecE	coord: 9..64 score: 12.919514
None	No IPR available	PANTHER	PTHR12309	SEC61 GAMMA SUBUNIT	coord: 1..69
None	No IPR available	PANTHER	PTHR12309:SF24	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA-3	coord: 1..69

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy6G120630	Chy6G120630	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy6G120630.1.exon2	Chy6G120630.1.exon2	exon
Chy6G120630.1.exon1	Chy6G120630.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy6G120630.1.cds2	Chy6G120630.1.cds2	CDS
Chy6G120630.1.cds1	Chy6G120630.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy6G120630.1	Chy6G120630.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006605	protein targeting
biological_process	GO:0015031	protein transport
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0071261	Ssh1 translocon complex
molecular_function	GO:0008320	protein transmembrane transporter activity