Chy4G077930.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy4G077930.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	actin-depolymerizing factor-like
Location	chrH04: 16126935 .. 16128190 (-)
Sequence length	540
RNA-Seq Expression	Chy4G077930.1
Synteny	Chy4G077930.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAACACTTTATCTGCAATGGGTGTGAATGAACACACCAAGAAAACATTTTCTGAACTACAAAGAAAGAAAATGTATCGATATGTGATCTTTAAGGTTGATGAAAAGAAAAGAGAGGTGGTGGTTGACAAGATTGGCAATCCTGCAGAGAGCTATGAAGATTTCACTGCTGCTCTGCCCGACAATGATTGCCGCTACGCTGTTTATGATTTTGATTTTGTGACATCCGACAATTGTCAGAAGAGCAAGATATTTTTCATAGCATGGTTAGCTTTCACCATCATTATATATCATGAACCTAATCTTATTTTTCTTACTACTATGTCAATGTCTATTGATCTATATTATTCATTGGGTTGGCCCCATACAAAATTTTGGTACATACTAAGGTAAACATTAGTTATCCCAAGGTTATAAGGTTTTGATTCTATGATGACTATCATTTCTAAGCTCAGCCTTTAGGTTTTTCATGTTTCTAGTCAATTGCTCATTCATCGAACTGAAAAGCACTCATAAAGTGCTTCTTAGGCTTAGAACTTGGTTAGTTTTATTGTTAATGTGTTGTTGATGCTTTTCTTTGACCTTCCTAGGATATTTCTTTATTTTTTGCTCTAGTTTGCCCATTCCAGTCTAAACTTTCTGTTCCTACAAATTTAACAAAGAAATGCATCAAAGAACAAAATTTAACAACAAAATCAATTAAATTCTAAGCCTAAGAAAAGACTGTTTTAGTGCTTTTAAGGAACTCATCTGGTGTACTTGCTAATTTCACTAAATACCTTCTTCTGGTGCATATGCTTTACTCTCCACACTGCAGAAGTTGGACTTTAGTGGTTAGAGCTCTATATGCATCTTCTAATCTCGCTGAAGATCATAGTACATCAAAAGTTTTGGGCAAAACTTGAAAATCTTGTCATATTTTGTCAGAATAATTCTCCCTTTTGTTGTTGATGATCTAGTGCACTCATCGAATATCTTATTCTAAGAACCATCTAAGTTTTGACCTTGATTAGAAACAACAGGAATAGTTTTAATCATGTCATACCAATGACTATCGTGGGGTATCTTTTCTCTCTTGATCTCACACTACATTGTTGTACTTCAGGTCTCCAGCTAGCTCACGAATCCGTGCTAAGATGCTCTATGCAACATCTAAAGACAACTTTCGGCACGAGCTTGATGGCATCCACTATGAAATTCAAGCTACTGACCCTGCAGAGATGGACCTGGAAGTGATCAGAGACCGTGCTCAATGA

mRNA sequence

CAAAACACTTTATCTGCAATGGGTGTGAATGAACACACCAAGAAAACATTTTCTGAACTACAAAGAAAGAAAATGTATCGATATGTGATCTTTAAGGTTGATGAAAAGAAAAGAGAGGTGGTGGTTGACAAGATTGGCAATCCTGCAGAGAGCTATGAAGATTTCACTGCTGCTCTGCCCGACAATGATTGCCGCTACGCTGTTTATGATTTTGATTTTGTGACATCCGACAATTGTCAGAAGAGCAAGATATTTTTCATAGCATGGTTAGCTTTCACCATCATTATATATCATGAACCTAATCTTATTTTTCTTACTACTATGTCAATGTCTATTGATCTATATTATTCATTGGGTTGGCCCCATACAAAATTTTGGTACATACTAAGGTCTCCAGCTAGCTCACGAATCCGTGCTAAGATGCTCTATGCAACATCTAAAGACAACTTTCGGCACGAGCTTGATGGCATCCACTATGAAATTCAAGCTACTGACCCTGCAGAGATGGACCTGGAAGTGATCAGAGACCGTGCTCAATGA

Coding sequence (CDS)

CAAAACACTTTATCTGCAATGGGTGTGAATGAACACACCAAGAAAACATTTTCTGAACTACAAAGAAAGAAAATGTATCGATATGTGATCTTTAAGGTTGATGAAAAGAAAAGAGAGGTGGTGGTTGACAAGATTGGCAATCCTGCAGAGAGCTATGAAGATTTCACTGCTGCTCTGCCCGACAATGATTGCCGCTACGCTGTTTATGATTTTGATTTTGTGACATCCGACAATTGTCAGAAGAGCAAGATATTTTTCATAGCATGGTTAGCTTTCACCATCATTATATATCATGAACCTAATCTTATTTTTCTTACTACTATGTCAATGTCTATTGATCTATATTATTCATTGGGTTGGCCCCATACAAAATTTTGGTACATACTAAGGTCTCCAGCTAGCTCACGAATCCGTGCTAAGATGCTCTATGCAACATCTAAAGACAACTTTCGGCACGAGCTTGATGGCATCCACTATGAAATTCAAGCTACTGACCCTGCAGAGATGGACCTGGAAGTGATCAGAGACCGTGCTCAATGA

Protein sequence

QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWPHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ*

Homology

[Close]

BLAST of Chy4G077930.1 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.4e-52
Identity = 106/177 (59.89%), Postives = 123/177 (69.49%), Query Frame = 0


Query: 2   NTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPD 61
           N  S MGV +H+K TF EL+RKK++RYVIFK+DEKK+EVVV+K G PAES+++F AALP+
Sbjct: 7   NASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPE 66

Query: 62  NDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWP 121
           NDCRYAVYDFDFVTS+NCQKSKIFFIAW                                
Sbjct: 67  NDCRYAVYDFDFVTSENCQKSKIFFIAW-------------------------------- 126

Query: 122 HTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRA 179
                    SP SSRIRAKMLYATSK+ FR ELDG+HYEIQATDP EMDLEV+R+RA
Sbjct: 127 ---------SPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERA 142

[Close]

BLAST of Chy4G077930.1 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-48
Identity = 99/177 (55.93%), Postives = 117/177 (66.10%), Query Frame = 0


Query: 2   NTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPD 61
           N +S MGV + +K TF ELQRKK +RYV+FK+DE K+EVVV+K GNP ESY+DF A+LPD
Sbjct: 10  NAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPD 69

Query: 62  NDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWP 121
           NDCRYAVYDFDFVTS+NCQKSKIFF AW                                
Sbjct: 70  NDCRYAVYDFDFVTSENCQKSKIFFFAW-------------------------------- 129

Query: 122 HTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRA 179
                    SP++S IRAK+LY+TSKD    EL GIHYEIQATDP E+DLEV+R+RA
Sbjct: 130 ---------SPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERA 145

[Close]

BLAST of Chy4G077930.1 vs. ExPASy Swiss-Prot
Match: Q2QLT8 (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.9e-45
Identity = 92/177 (51.98%), Postives = 117/177 (66.10%), Query Frame = 0


Query: 2   NTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPD 61
           N  S +GV    K+TF ELQRKK +RYVIFK+D+K +EVVV+K G+  ES++DF  +LP+
Sbjct: 9   NASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE 68

Query: 62  NDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWP 121
           +DCRYA+YDFDFVT +NCQKSKIFF+AW                                
Sbjct: 69  SDCRYAIYDFDFVTEENCQKSKIFFVAW-------------------------------- 128

Query: 122 HTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRA 179
                    SP+ SRIRAKMLYATSK+ FR ELDG+HYEIQATDP+E+D+E++R+RA
Sbjct: 129 ---------SPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERA 144

[Close]

BLAST of Chy4G077930.1 vs. ExPASy Swiss-Prot
Match: Q9AY76 (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 93/177 (52.54%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 2   NTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPD 61
           N  S MGV    + TF ELQ KK +RYVIFK++EK+++VVV+K G   ESY+DF A+LP+
Sbjct: 9   NASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPE 68

Query: 62  NDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWP 121
           NDCRYA+YDFDFVT +N QKSKIFFIAW                                
Sbjct: 69  NDCRYALYDFDFVTGENVQKSKIFFIAW-------------------------------- 128

Query: 122 HTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRA 179
                    SP++SRIRAKMLY+TSKD  + ELDG HYEIQATDP E+DLEV+R+RA
Sbjct: 129 ---------SPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERA 144

[Close]

BLAST of Chy4G077930.1 vs. ExPASy Swiss-Prot
Match: Q337A5 (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.1e-41
Identity = 86/170 (50.59%), Postives = 111/170 (65.29%), Query Frame = 0


Query: 9   VNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPDNDCRYAV 68
           V E +K  F EL+R+K++RYVIFK+D+++ E+VV+K G P ESY+DFTA+LP +DCRYAV
Sbjct: 20  VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAV 79

Query: 69  YDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWPHTKFWYI 128
           YD DFV+ DNC+KSKIFFI+W                                       
Sbjct: 80  YDLDFVSDDNCRKSKIFFISW--------------------------------------- 139

Query: 129 LRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRA 179
             SP+ SRIRAK +YA S++ FRHELDG+H+EIQATDP +MDLEV+R RA
Sbjct: 140 --SPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRA 148

[Close]

BLAST of Chy4G077930.1 vs. ExPASy TrEMBL
Match: A0A1S3BHG1 (actin-depolymerizing factor OS=Cucumis melo OX=3656 GN=LOC103489879 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.6e-66
Identity = 138/179 (77.09%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP
Sbjct: 9   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 68

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 69  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 128

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 180
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 129 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]

BLAST of Chy4G077930.1 vs. ExPASy TrEMBL
Match: A0A6J1K588 (actin-depolymerizing factor-like OS=Cucurbita maxima OX=3661 GN=LOC111491296 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.6e-66
Identity = 138/179 (77.09%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP
Sbjct: 9   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 68

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 69  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 128

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 180
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 129 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]

BLAST of Chy4G077930.1 vs. ExPASy TrEMBL
Match: A0A5D3DAD6 (Actin-depolymerizing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001160 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.6e-66
Identity = 138/179 (77.09%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP
Sbjct: 10  QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 69

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 70  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 129

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 180
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 130 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 147

[Close]

BLAST of Chy4G077930.1 vs. ExPASy TrEMBL
Match: A0A6J1EY99 (actin-depolymerizing factor-like OS=Cucurbita moschata OX=3662 GN=LOC111437311 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.6e-66
Identity = 138/179 (77.09%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP
Sbjct: 9   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 68

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 69  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 128

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 180
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 129 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]

BLAST of Chy4G077930.1 vs. ExPASy TrEMBL
Match: A0A0A0L7Z2 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G389830 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.3e-65
Identity = 137/179 (76.54%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIF+VDEKKREVVVDKIGNPAESYEDFTAALP
Sbjct: 9   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAALP 68

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 69  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 128

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 180
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 129 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]

BLAST of Chy4G077930.1 vs. NCBI nr
Match: XP_008447430.1 (PREDICTED: actin-depolymerizing factor [Cucumis melo] >XP_008447431.1 PREDICTED: actin-depolymerizing factor [Cucumis melo] >XP_022930980.1 actin-depolymerizing factor-like [Cucurbita moschata] >XP_022995915.1 actin-depolymerizing factor-like [Cucurbita maxima] >XP_023533852.1 actin-depolymerizing factor-like [Cucurbita pepo subsp. pepo] >KAG6606377.1 Actin-depolymerizing factor 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036318.1 Actin-depolymerizing factor 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 259 bits (663), Expect = 3.84e-86
Identity = 138/179 (77.09%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP
Sbjct: 9   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 68

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 69  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 128

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 179
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 129 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]

BLAST of Chy4G077930.1 vs. NCBI nr
Match: TYK20532.1 (actin-depolymerizing factor [Cucumis melo var. makuwa])

HSP 1 Score: 259 bits (663), Expect = 3.97e-86
Identity = 138/179 (77.09%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP
Sbjct: 10  QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 69

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 70  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 129

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 179
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 130 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 147

[Close]

BLAST of Chy4G077930.1 vs. NCBI nr
Match: XP_004151983.1 (actin-depolymerizing factor [Cucumis sativus] >XP_011651442.1 actin-depolymerizing factor [Cucumis sativus] >KGN57913.1 hypothetical protein Csa_010146 [Cucumis sativus])

HSP 1 Score: 258 bits (660), Expect = 1.10e-85
Identity = 137/179 (76.54%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIF+VDEKKREVVVDKIGNPAESYEDFTAALP
Sbjct: 9   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAALP 68

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 69  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 128

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 179
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 129 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]

BLAST of Chy4G077930.1 vs. NCBI nr
Match: XP_038888227.1 (actin-depolymerizing factor [Benincasa hispida])

HSP 1 Score: 258 bits (658), Expect = 2.22e-85
Identity = 137/179 (76.54%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIG+PAESYEDFTAALP
Sbjct: 9   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESYEDFTAALP 68

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 69  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 128

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 179
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 129 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]

BLAST of Chy4G077930.1 vs. NCBI nr
Match: XP_022145996.1 (actin-depolymerizing factor [Momordica charantia])

HSP 1 Score: 254 bits (649), Expect = 5.22e-84
Identity = 135/179 (75.42%), Postives = 137/179 (76.54%), Query Frame = 0


Query: 1   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALP 60
           QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVV+K G+PAESYEDFTAALP
Sbjct: 9   QNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVEKTGSPAESYEDFTAALP 68

Query: 61  DNDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGW 120
           DNDCRYAVYDFDFVTSDNCQKSKIFFIAW                               
Sbjct: 69  DNDCRYAVYDFDFVTSDNCQKSKIFFIAW------------------------------- 128

Query: 121 PHTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 179
                     SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 129 ----------SPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]

BLAST of Chy4G077930.1 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-49
Identity = 99/177 (55.93%), Postives = 117/177 (66.10%), Query Frame = 0


Query: 2   NTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPD 61
           N +S MGV + +K TF ELQRKK +RYV+FK+DE K+EVVV+K GNP ESY+DF A+LPD
Sbjct: 10  NAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPD 69

Query: 62  NDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWP 121
           NDCRYAVYDFDFVTS+NCQKSKIFF AW                                
Sbjct: 70  NDCRYAVYDFDFVTSENCQKSKIFFFAW-------------------------------- 129

Query: 122 HTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRA 179
                    SP++S IRAK+LY+TSKD    EL GIHYEIQATDP E+DLEV+R+RA
Sbjct: 130 ---------SPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERA 145

[Close]

BLAST of Chy4G077930.1 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 167.5 bits (423), Expect = 9.5e-42
Identity = 81/176 (46.02%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 2   NTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPD 61
           N+ S M VN+  K  F EL+ K+ YR+++FK+DEK ++V ++K+GNP E+Y+DFT+++PD
Sbjct: 3   NSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPD 62

Query: 62  NDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWP 121
           ++CRYAVYDFDF T DNCQKSKIFFIAW                                
Sbjct: 63  DECRYAVYDFDFTTEDNCQKSKIFFIAW-------------------------------- 122

Query: 122 HTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDR 178
                    SP +SR+R+KMLYA+SKD F+ E++GI  E+QATDP+EM L++I+ R
Sbjct: 123 ---------SPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of Chy4G077930.1 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 166.4 bits (420), Expect = 2.1e-41
Identity = 81/176 (46.02%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 2   NTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPD 61
           N+ S M V++  K  F EL+ K+ YR+++FK+DEK ++V++DK+GNP E+YEDFT ++P+
Sbjct: 3   NSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPE 62

Query: 62  NDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWP 121
           ++CRYAVYD+DF T +NCQKSKIFFIAW                                
Sbjct: 63  DECRYAVYDYDFTTPENCQKSKIFFIAW-------------------------------- 122

Query: 122 HTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDR 178
                    SP +SR+R+KMLYA+SKD F+ ELDGI  E+QATDP+EM L++I+ R
Sbjct: 123 ---------SPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of Chy4G077930.1 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 159.5 bits (402), Expect = 2.6e-39
Identity = 82/177 (46.33%), Postives = 109/177 (61.58%), Query Frame = 0


Query: 2   NTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPD 61
           N  S M V +  K  F EL+ K+ YR++IF++D   ++VVV+K+GNP E+Y+DFTA+LP 
Sbjct: 3   NAASGMAVEDECKLKFLELKSKRNYRFIIFRID--GQQVVVEKLGNPDETYDDFTASLPA 62

Query: 62  NDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWP 121
           N+CRYAV+DFDF+T +NCQKSKIFFIAW                                
Sbjct: 63  NECRYAVFDFDFITDENCQKSKIFFIAW-------------------------------- 122

Query: 122 HTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRA 179
                    SP SSR+R KM+YA+SKD F+ ELDGI  E+QATDP+EM  ++I+ RA
Sbjct: 123 ---------SPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 136

[Close]

BLAST of Chy4G077930.1 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 158.7 bits (400), Expect = 4.4e-39
Identity = 77/177 (43.50%), Postives = 110/177 (62.15%), Query Frame = 0


Query: 2   NTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESYEDFTAALPD 61
           N  S M V++  K  F EL+ K+ +R++++K++EK+++VVV+K+G P ++YE+F A LP 
Sbjct: 3   NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPA 62

Query: 62  NDCRYAVYDFDFVTSDNCQKSKIFFIAWLAFTIIIYHEPNLIFLTTMSMSIDLYYSLGWP 121
           ++CRYA+YDFDFVT++NCQKSKIFFIAW                                
Sbjct: 63  DECRYAIYDFDFVTAENCQKSKIFFIAW-------------------------------- 122

Query: 122 HTKFWYILRSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRA 179
                     P  +++R+KM+YA+SKD F+ ELDGI  E+QATDP EMDL+V R RA
Sbjct: 123 ---------CPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRA 138

The following BLAST results are available for this feature:

BLAST of Chy4G077930.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8SAG3	3.4e-52	59.89	Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1	[more]
Q9ZSK2	3.0e-48	55.93	Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1	[more]
Q2QLT8	6.9e-45	51.98	Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11...	[more]
Q9AY76	1.3e-43	52.54	Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 P...	[more]
Q337A5	2.1e-41	50.59	Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10...	[more]

BLAST of Chy4G077930.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHG1	5.6e-66	77.09	actin-depolymerizing factor OS=Cucumis melo OX=3656 GN=LOC103489879 PE=3 SV=1	[more]
A0A6J1K588	5.6e-66	77.09	actin-depolymerizing factor-like OS=Cucurbita maxima OX=3661 GN=LOC111491296 PE=...	[more]
A0A5D3DAD6	5.6e-66	77.09	Actin-depolymerizing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1EY99	5.6e-66	77.09	actin-depolymerizing factor-like OS=Cucurbita moschata OX=3662 GN=LOC111437311 P...	[more]
A0A0A0L7Z2	1.3e-65	76.54	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G389830 PE=3 ...	[more]

BLAST of Chy4G077930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447430.1	3.84e-86	77.09	PREDICTED: actin-depolymerizing factor [Cucumis melo] >XP_008447431.1 PREDICTED:...	[more]
TYK20532.1	3.97e-86	77.09	actin-depolymerizing factor [Cucumis melo var. makuwa]	[more]
XP_004151983.1	1.10e-85	76.54	actin-depolymerizing factor [Cucumis sativus] >XP_011651442.1 actin-depolymerizi...	[more]
XP_038888227.1	2.22e-85	76.54	actin-depolymerizing factor [Benincasa hispida]	[more]
XP_022145996.1	5.22e-84	75.42	actin-depolymerizing factor [Momordica charantia]	[more]

BLAST of Chy4G077930.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31200.1	2.1e-49	55.93	actin depolymerizing factor 6	[more]
AT4G00680.1	9.5e-42	46.02	actin depolymerizing factor 8	[more]
AT1G01750.1	2.1e-41	46.02	actin depolymerizing factor 11	[more]
AT4G25590.1	2.6e-39	46.33	actin depolymerizing factor 7	[more]
AT3G46010.1	4.4e-39	43.50	actin depolymerizing factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 11..179 e-value: 1.1E-34 score: 131.2
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..90 e-value: 2.1E-19 score: 69.5 coord: 122..176 e-value: 1.4E-11 score: 44.3
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 5..179 score: 26.223747
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 3..179 e-value: 3.2E-47 score: 161.7
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 122..179 coord: 2..94
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 5..178 e-value: 2.00095E-53 score: 164.652
None	No IPR available	PANTHER	PTHR11913:SF96	COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN	coord: 2..94
None	No IPR available	PANTHER	PTHR11913:SF96	COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN	coord: 122..179
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 122..177
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 3..90

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy4G077930	Chy4G077930	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy4G077930.1.exon2	Chy4G077930.1.exon2	exon
Chy4G077930.1.exon1	Chy4G077930.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy4G077930.1.cds2	Chy4G077930.1.cds2	CDS
Chy4G077930.1.cds1	Chy4G077930.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy4G077930.1	Chy4G077930.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003779	actin binding
molecular_function	GO:0051015	actin filament binding