Chy4G075300.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy4G075300.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH04: 10575121 .. 10576302 (-)
Sequence length	1182
RNA-Seq Expression	Chy4G075300.1
Synteny	Chy4G075300.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCAGCAAATTTCTCCGCCCGATTCTCTCATCTTCCCGCAGACCCCAACTCTTTTCATCACCATTTCAATCACTTCTCAACCCCATTCTTCCATCCCATCTCCACCCCCATTTTCTCTGCTCCCTGTCCCCACCTTCATCCGCTCTTCTTCCTCCTCAAAACTCCGACAACCTCAATCTCCCAATCCCAAAAGTTCGAACCCAAACTCCTCTCGAGAAGCAATTCGAATCATGGGTTCAGAAGCTCAAGCCCGGTTTCTCCCCTTCCGACGTCAACGAGGCTCTACAAGCCCAATCCGACCCCGATCTCGCCCTCGACCTTTTCCGGTGGACGGCGCAGCAGCGCGGCTACAAACACAGCCATTTAACCTATCTAACAATCATTAAGATCTTAATTTACCGCCGGAGATACCACCTCGCTGAAACCCTAGTTGAAGAGGTAATTGCTGGTGCTTGTGAAATGAGTGTGCCGCTTTACAATTCCGTGATTAGGTTCTGCTGTGCCCGGAAATGTCGGTTTAATCGAGCTTTTGATGTGTACAAAAAGATGTGGAAATCTGATGACTGTAAACCCACGCTTGAAACTTATGCAATGCTGTTCAATTCACTGCTTAGGAGATTCAATAAGTTGAGTGTTTCTTATGTTTATTTACATTCGGTTCGTTCGTTAACGAAGCAAATGAAATCGTCTGGTGTGATTCCCGATACTTTTGTGTTGAACATGATCATTAAAGCATATTCTAAGTGTCTTGAAGTTGATGAAGCGATTCGGGTTTTTCGAGAAATGGGGTTGTATGCTTGCCAACCGAATTCGTATACTTATGGCTACATTGCAAAAGGGTTGTGTGAGAAAGGACGAGTTGAACAAGGGTTGGAATTTTACAAGGAAATGAGAGTTAGAGGCTTGATTCCTAGCAGCAGTACTTATATGATTTTGATTTGTAGTCTAGCAATGGAACGCAGATTTGAGGAAGCTATTGAGATTTGTTTTGATATGTTGTGTAATTCCATGGCACCGGATTTGCTTACTTACAGAACCTTGTTAGAAGGATTATGTCGGGAAGGACGGGATAGCGAAGCATTTGATTTGCTTGATGAATTGAGGAAGAGGGATAAACTGATGAATGAGAAAACATTCAAGACTCTATTAAATGGACTGCACACTGTTGGTAGAGATTAG

mRNA sequence

ATGCTCAGCAAATTTCTCCGCCCGATTCTCTCATCTTCCCGCAGACCCCAACTCTTTTCATCACCATTTCAATCACTTCTCAACCCCATTCTTCCATCCCATCTCCACCCCCATTTTCTCTGCTCCCTGTCCCCACCTTCATCCGCTCTTCTTCCTCCTCAAAACTCCGACAACCTCAATCTCCCAATCCCAAAAGTTCGAACCCAAACTCCTCTCGAGAAGCAATTCGAATCATGGGTTCAGAAGCTCAAGCCCGGTTTCTCCCCTTCCGACGTCAACGAGGCTCTACAAGCCCAATCCGACCCCGATCTCGCCCTCGACCTTTTCCGGTGGACGGCGCAGCAGCGCGGCTACAAACACAGCCATTTAACCTATCTAACAATCATTAAGATCTTAATTTACCGCCGGAGATACCACCTCGCTGAAACCCTAGTTGAAGAGGTAATTGCTGGTGCTTGTGAAATGAGTGTGCCGCTTTACAATTCCGTGATTAGGTTCTGCTGTGCCCGGAAATGTCGGTTTAATCGAGCTTTTGATGTGTACAAAAAGATGTGGAAATCTGATGACTGTAAACCCACGCTTGAAACTTATGCAATGCTGTTCAATTCACTGCTTAGGAGATTCAATAAGTTGAGTGTTTCTTATGTTTATTTACATTCGGTTCGTTCGTTAACGAAGCAAATGAAATCGTCTGGTGTGATTCCCGATACTTTTGTGTTGAACATGATCATTAAAGCATATTCTAAGTGTCTTGAAGTTGATGAAGCGATTCGGGTTTTTCGAGAAATGGGGTTGTATGCTTGCCAACCGAATTCGTATACTTATGGCTACATTGCAAAAGGGTTGTGTGAGAAAGGACGAGTTGAACAAGGGTTGGAATTTTACAAGGAAATGAGAGTTAGAGGCTTGATTCCTAGCAGCAGTACTTATATGATTTTGATTTGTAGTCTAGCAATGGAACGCAGATTTGAGGAAGCTATTGAGATTTGTTTTGATATGTTGTGTAATTCCATGGCACCGGATTTGCTTACTTACAGAACCTTGTTAGAAGGATTATGTCGGGAAGGACGGGATAGCGAAGCATTTGATTTGCTTGATGAATTGAGGAAGAGGGATAAACTGATGAATGAGAAAACATTCAAGACTCTATTAAATGGACTGCACACTGTTGGTAGAGATTAG

Coding sequence (CDS)

ATGCTCAGCAAATTTCTCCGCCCGATTCTCTCATCTTCCCGCAGACCCCAACTCTTTTCATCACCATTTCAATCACTTCTCAACCCCATTCTTCCATCCCATCTCCACCCCCATTTTCTCTGCTCCCTGTCCCCACCTTCATCCGCTCTTCTTCCTCCTCAAAACTCCGACAACCTCAATCTCCCAATCCCAAAAGTTCGAACCCAAACTCCTCTCGAGAAGCAATTCGAATCATGGGTTCAGAAGCTCAAGCCCGGTTTCTCCCCTTCCGACGTCAACGAGGCTCTACAAGCCCAATCCGACCCCGATCTCGCCCTCGACCTTTTCCGGTGGACGGCGCAGCAGCGCGGCTACAAACACAGCCATTTAACCTATCTAACAATCATTAAGATCTTAATTTACCGCCGGAGATACCACCTCGCTGAAACCCTAGTTGAAGAGGTAATTGCTGGTGCTTGTGAAATGAGTGTGCCGCTTTACAATTCCGTGATTAGGTTCTGCTGTGCCCGGAAATGTCGGTTTAATCGAGCTTTTGATGTGTACAAAAAGATGTGGAAATCTGATGACTGTAAACCCACGCTTGAAACTTATGCAATGCTGTTCAATTCACTGCTTAGGAGATTCAATAAGTTGAGTGTTTCTTATGTTTATTTACATTCGGTTCGTTCGTTAACGAAGCAAATGAAATCGTCTGGTGTGATTCCCGATACTTTTGTGTTGAACATGATCATTAAAGCATATTCTAAGTGTCTTGAAGTTGATGAAGCGATTCGGGTTTTTCGAGAAATGGGGTTGTATGCTTGCCAACCGAATTCGTATACTTATGGCTACATTGCAAAAGGGTTGTGTGAGAAAGGACGAGTTGAACAAGGGTTGGAATTTTACAAGGAAATGAGAGTTAGAGGCTTGATTCCTAGCAGCAGTACTTATATGATTTTGATTTGTAGTCTAGCAATGGAACGCAGATTTGAGGAAGCTATTGAGATTTGTTTTGATATGTTGTGTAATTCCATGGCACCGGATTTGCTTACTTACAGAACCTTGTTAGAAGGATTATGTCGGGAAGGACGGGATAGCGAAGCATTTGATTTGCTTGATGAATTGAGGAAGAGGGATAAACTGATGAATGAGAAAACATTCAAGACTCTATTAAATGGACTGCACACTGTTGGTAGAGATTAG

Protein sequence

MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLNLPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHSHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDVYKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD*

Homology

[Close]

BLAST of Chy4G075300.1 vs. ExPASy Swiss-Prot
Match: Q9LSF5 (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g25210 PE=2 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 5.6e-132
Identity = 234/384 (60.94%), Postives = 296/384 (77.08%), Query Frame = 0


Query: 9   ILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLNLPIPKVRT 68
           +L+S+ R +  S PF S       +HL   F    S P S   P            ++RT
Sbjct: 10  LLTSTNRSRNLSPPFLS----TAVNHLSLSFSSVSSSPESHTSP-----------SRIRT 69

Query: 69  QTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHSHLTYLTI 128
           +TPLE QFE+W+Q LKPGF+ SDV  AL+AQSDPDLALD+FRWTAQQRGYKH+H  Y T+
Sbjct: 70  RTPLETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTM 129

Query: 129 IKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDVYKKMWKSD 188
           IK  I  +R +  ETL+EEVIAGACEMSVPLYN +IRFCC RK  FNRAFDVY KM +SD
Sbjct: 130 IKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSD 189

Query: 189 DCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYS 248
           D KP LETY +L +SLL+RFNKL+V YVYLH+VRSLTKQMKS+GVIPDTFVLNMIIKAY+
Sbjct: 190 DSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYA 249

Query: 249 KCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSS 308
           KCLEVDEAIRVF+EM LY  +PN+YTY Y+ KG+CEKGRV QGL FYKEM+V+G++P+ S
Sbjct: 250 KCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGS 309

Query: 309 TYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDEL 368
            YM+LICSL+MERR +EA+E+ +DML NS++PD+LTY T+L  LCR GR SEA ++++E 
Sbjct: 310 CYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEW 369

Query: 369 RKRDKLMNEKTFKTLLNGLHTVGR 393
           +KRD +M E+ ++TL++ ++ + +
Sbjct: 370 KKRDPVMGERNYRTLMDEVYFLNK 378

[Close]

BLAST of Chy4G075300.1 vs. ExPASy Swiss-Prot
Match: Q9ZUY1 (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-53
Identity = 109/317 (34.38%), Postives = 191/317 (60.25%), Query Frame = 0


Query: 75  QFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHSHLTYLTIIKILIY 134
           +F   + KL P F+P ++ +A+  + DP L   LF W +QQ  + H + +Y   I+ L  
Sbjct: 125 KFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGA 184

Query: 135 RRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDVYKKM--WKSDDCKP 194
            + Y   + +V +V++     +  LYNS+I F   +  +  RA ++++ M   K+ +C+P
Sbjct: 185 AKMYQEMDDIVNQVLSVRHIGNENLYNSII-FYFTKAGKLIRAVNIFRHMVTSKNLECRP 244

Query: 195 TLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLE 254
           T+ TY +LF +LL R N   +++VY+ +VRSL +QM  SG+ PD F LN ++K Y   L 
Sbjct: 245 TIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLH 304

Query: 255 VDEAIRVFREMG-LYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSSTYM 314
           V++A+R+F +M  +Y C+PNS+TY Y+  GLC +GR     E   EM+ +G +P+  +Y 
Sbjct: 305 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 364

Query: 315 ILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKR 374
            L+ + A+    ++A++  ++M+ N    D ++YRTL++  CR+G+  EA  LL+ LR++
Sbjct: 365 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 424

Query: 375 DKLMNEKTFKTLLNGLH 389
            +L++  ++  L+N LH
Sbjct: 425 -QLVDRDSYDKLVNVLH 439

[Close]

BLAST of Chy4G075300.1 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.6e-30
Identity = 88/312 (28.21%), Postives = 158/312 (50.64%), Query Frame = 0


Query: 82  KLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQ--RGYKHSHLTYLTIIKILIYRRRYH 141
           K     +PS V + ++A+ D + ++ +F     +   GY H   ++  ++  L+   ++ 
Sbjct: 9   KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68

Query: 142 LAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFD---VYKKMWKSDDCKPTLET 201
            AE L+  +    C +S  +  S+    C    R +R FD   V+ KM K  DC P+ + 
Sbjct: 69  AAEDLIVRMKIENCVVSEDILLSI----CRGYGRVHRPFDSLRVFHKM-KDFDCDPSQKA 128

Query: 202 YAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSK-CLEVDE 261
           Y  +  ++L   N+L++++ +        K M+  G+ P    LN++IKA  +    VD 
Sbjct: 129 YVTVL-AILVEENQLNLAFKFY-------KNMREIGLPPTVASLNVLIKALCRNDGTVDA 188

Query: 262 AIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSSTYMILIC 321
            +++F EM    C P+SYTYG +  GLC  GR+++  + + EM  +   P+  TY  LI 
Sbjct: 189 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 248

Query: 322 SLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLM 381
            L   +  +EA+    +M    + P++ TY +L++GLC++GR  +A +L + +  R    
Sbjct: 249 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 307

Query: 382 NEKTFKTLLNGL 388
           N  T+ TL+ GL
Sbjct: 309 NMVTYTTLITGL 307

[Close]

BLAST of Chy4G075300.1 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.2e-29
Identity = 87/340 (25.59%), Postives = 157/340 (46.18%), Query Frame = 0


Query: 96  LQAQSDPDLALDLFRWTAQQRGYKHSHLTYLTIIKILIYRRRYHLAETLVEEVI------ 155
           ++ + DP LA   F+W+  + G+KHS  +Y  +  IL   R Y+ A ++++E++      
Sbjct: 116 VELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADC 175

Query: 156 -----------------------------AGACEMSVPLYNSVIRFCCARKCR-FNRAFD 215
                                         G  E ++  ++ + RF    K R  N    
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235

Query: 216 VYKKMWKSDDCK------------PTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQ 275
            + K+ K+DD K            PT+ TY ++ + + +  +        + + R L ++
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD--------VEAARGLFEE 295

Query: 276 MKSSGVIPDTFVLNMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGR 335
           MK  G++PDT   N +I  + K   +D+ +  F EM    C+P+  TY  +    C+ G+
Sbjct: 296 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 355

Query: 336 VEQGLEFYKEMRVRGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRT 388
           +  GLEFY+EM+  GL P+  +Y  L+ +   E   ++AI+   DM    + P+  TY +
Sbjct: 356 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 415

[Close]

BLAST of Chy4G075300.1 vs. ExPASy Swiss-Prot
Match: Q9CAN6 (Pentatricopeptide repeat-containing protein At1g63070, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63070 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.4e-26
Identity = 82/278 (29.50%), Postives = 136/278 (48.92%), Query Frame = 0


Query: 116 RGYKHSHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFN 175
           +G +   +TY  +I  L  R    LA  L+ ++  G  E  V +YN++I   C  K   +
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK-HMD 268

Query: 176 RAFDVYKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIP 235
            AFD++ KM ++   KP + TY  L + L         +Y        L   M    + P
Sbjct: 269 DAFDLFNKM-ETKGIKPDVFTYNPLISCL--------CNYGRWSDASRLLSDMLEKNINP 328

Query: 236 DTFVLNMIIKAYSKCLEVDEAIRVFREM-GLYACQPNSYTYGYIAKGLCEKGRVEQGLEF 295
           D    N +I A+ K  ++ EA +++ EM     C P+   Y  + KG C+  RVE+G+E 
Sbjct: 329 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 388

Query: 296 YKEMRVRGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCR 355
           ++EM  RGL+ ++ TY  LI      R  + A  +   M+ + + PD++TY  LL+GLC 
Sbjct: 389 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 448

Query: 356 EGRDSEAFDLLDELRKRDKLMNEKTFKTLLNGLHTVGR 393
            G    A  + + ++KRD  ++  T+ T++  L   G+
Sbjct: 449 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476

[Close]

BLAST of Chy4G075300.1 vs. ExPASy TrEMBL
Match: A0A0A0L8U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G635360 PE=4 SV=1)

HSP 1 Score: 776.5 bits (2004), Expect = 5.1e-221
Identity = 387/393 (98.47%), Postives = 388/393 (98.73%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           MLSKFLRPILSS RRP LFSSPFQSLLNPILPSHLH  FLCSLSPPSSALLPPQNSDNLN
Sbjct: 1   MLSKFLRPILSSCRRPHLFSSPFQSLLNPILPSHLHHRFLCSLSPPSSALLPPQNSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           +HLTYLTIIKILIYRRR HLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV
Sbjct: 121 NHLTYLTIIKILIYRRRCHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 394
           AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD
Sbjct: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393

[Close]

BLAST of Chy4G075300.1 vs. ExPASy TrEMBL
Match: A0A5D3DR42 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00350 PE=4 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 2.5e-212
Identity = 373/393 (94.91%), Postives = 380/393 (96.69%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           ML KFLRPI+SSSR P LFSSPFQSLLNPILPSHLHP FLCSLSPPSSA LPPQ+SDNLN
Sbjct: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           + LTYLTIIKILI  RRYHLA+TLVEEVIAGACEMSVPLYNSVIRFCC RK RFNRAFDV
Sbjct: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKL+VSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVE+GLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 394
           AFDLLDELRKRDKLM+EKTFK LLNGLHTVGRD
Sbjct: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 393

[Close]

BLAST of Chy4G075300.1 vs. ExPASy TrEMBL
Match: A0A1S4E2S7 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499230 PE=4 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 2.5e-212
Identity = 373/393 (94.91%), Postives = 380/393 (96.69%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           ML KFLRPI+SSSR P LFSSPFQSLLNPILPSHLHP FLCSLSPPSSA LPPQ+SDNLN
Sbjct: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           + LTYLTIIKILI  RRYHLA+TLVEEVIAGACEMSVPLYNSVIRFCC RK RFNRAFDV
Sbjct: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKL+VSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVE+GLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 394
           AFDLLDELRKRDKLM+EKTFK LLNGLHTVGRD
Sbjct: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 393

[Close]

BLAST of Chy4G075300.1 vs. ExPASy TrEMBL
Match: A0A6J1K5G5 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111490928 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.9e-189
Identity = 333/393 (84.73%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           M+ KFLRP+LS+SR+    SSPFQSL NPILP +LH   LCS SP  S +LP Q  +N +
Sbjct: 1   MIGKFLRPVLSASRKRNPLSSPFQSLPNPILPYNLHRRSLCSPSPSPSTVLPSQPPENFS 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPI KVR+QTPLEKQFE+WVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH
Sbjct: 61  LPIQKVRSQTPLEKQFETWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           + LTYLTIIKILI RRRYHLAETLVEEV+AGACEMSVPLYNSVIRFCC R+  FNRAFDV
Sbjct: 121 NDLTYLTIIKILICRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRRFLFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKP LETYAMLFNSLLRRFNKL+V YVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPNLETYAMLFNSLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV QGLEFYKEMRV
Sbjct: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           +GL PSSSTYMILICSLAME RF+EAIE+CFDML  S APD+LTYRTLLEGLCREGRDS+
Sbjct: 301 KGLSPSSSTYMILICSLAMEGRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 394
           AFDLLDEL+KRDKLMNEKTF  LLNGLH VGR+
Sbjct: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 393

[Close]

BLAST of Chy4G075300.1 vs. ExPASy TrEMBL
Match: A0A6J1ETB4 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111437373 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 1.3e-187
Identity = 331/393 (84.22%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           M+ KFLRP+LS+SR+    SS FQSL NPILP +LH   LCS SP  S +LPPQ  +N +
Sbjct: 1   MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSP--STVLPPQTPENFD 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPI KVR+QTPLEKQFE+W+QKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH
Sbjct: 61  LPIQKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           + LTYLTIIKILI RR+YHLAETLVEEV+AGACEMSVPLYNSVIRFCC RK  FNRAFDV
Sbjct: 121 NDLTYLTIIKILICRRKYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKP LETYAMLFN+LLRRFNKL+V YVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV QGLEFYKEMRV
Sbjct: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           +GL PSSSTYMILICSLAME RF+EAIE+CFDML  S APD+LTYRTLLEGLCREGRDS+
Sbjct: 301 KGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 394
           AFDLLDEL+KRDKLMNEKTF  LLNGLH VGR+
Sbjct: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 391

[Close]

BLAST of Chy4G075300.1 vs. NCBI nr
Match: XP_004144398.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucumis sativus] >KGN58385.1 hypothetical protein Csa_002386 [Cucumis sativus])

HSP 1 Score: 775 bits (2002), Expect = 1.39e-282
Identity = 387/393 (98.47%), Postives = 388/393 (98.73%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           MLSKFLRPILSS RRP LFSSPFQSLLNPILPSHLH  FLCSLSPPSSALLPPQNSDNLN
Sbjct: 1   MLSKFLRPILSSCRRPHLFSSPFQSLLNPILPSHLHHRFLCSLSPPSSALLPPQNSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           +HLTYLTIIKILIYRRR HLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV
Sbjct: 121 NHLTYLTIIKILIYRRRCHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393
           AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD
Sbjct: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393

[Close]

BLAST of Chy4G075300.1 vs. NCBI nr
Match: XP_016902527.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucumis melo] >KAA0068094.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 746 bits (1927), Expect = 4.05e-271
Identity = 373/393 (94.91%), Postives = 380/393 (96.69%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           ML KFLRPI+SSSR P LFSSPFQSLLNPILPSHLHP FLCSLSPPSSA LPPQ+SDNLN
Sbjct: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           + LTYLTIIKILI  RRYHLA+TLVEEVIAGACEMSVPLYNSVIRFCC RK RFNRAFDV
Sbjct: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKL+VSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVE+GLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393
           AFDLLDELRKRDKLM+EKTFK LLNGLHTVGRD
Sbjct: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 393

[Close]

BLAST of Chy4G075300.1 vs. NCBI nr
Match: XP_038888802.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Benincasa hispida])

HSP 1 Score: 714 bits (1843), Expect = 2.20e-258
Identity = 357/393 (90.84%), Postives = 372/393 (94.66%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           ML KFLRPILS+SRR   FSSPFQSLLNPILPSHLH  FLCS  PPSS ++P QNSDNLN
Sbjct: 1   MLGKFLRPILSASRRRHPFSSPFQSLLNPILPSHLHRRFLCS--PPSSTVIPSQNSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPIPK+R+QTPLEKQFE+WVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH
Sbjct: 61  LPIPKIRSQTPLEKQFETWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           + LTYLTIIKILI RRRYHLAETLVEEV+AGACEMSVPLYNSVIRFCC+RK  FNRAFDV
Sbjct: 121 NDLTYLTIIKILISRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCSRKFLFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKL+V YVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV QGLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           + L+PSSSTYMILICSLAMERRFEEAIEICFDML NSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 KRLLPSSSTYMILICSLAMERRFEEAIEICFDMLSNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393
           AFDLLDELRKRDKLMN+KTFK LLNGLH VGRD
Sbjct: 361 AFDLLDELRKRDKLMNQKTFKILLNGLHIVGRD 391

[Close]

BLAST of Chy4G075300.1 vs. NCBI nr
Match: XP_022995354.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita maxima])

HSP 1 Score: 669 bits (1727), Expect = 1.12e-240
Identity = 333/393 (84.73%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           M+ KFLRP+LS+SR+    SSPFQSL NPILP +LH   LCS SP  S +LP Q  +N +
Sbjct: 1   MIGKFLRPVLSASRKRNPLSSPFQSLPNPILPYNLHRRSLCSPSPSPSTVLPSQPPENFS 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPI KVR+QTPLEKQFE+WVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH
Sbjct: 61  LPIQKVRSQTPLEKQFETWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           + LTYLTIIKILI RRRYHLAETLVEEV+AGACEMSVPLYNSVIRFCC R+  FNRAFDV
Sbjct: 121 NDLTYLTIIKILICRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRRFLFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKP LETYAMLFNSLLRRFNKL+V YVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPNLETYAMLFNSLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV QGLEFYKEMRV
Sbjct: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           +GL PSSSTYMILICSLAME RF+EAIE+CFDML  S APD+LTYRTLLEGLCREGRDS+
Sbjct: 301 KGLSPSSSTYMILICSLAMEGRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393
           AFDLLDEL+KRDKLMNEKTF  LLNGLH VGR+
Sbjct: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 393

[Close]

BLAST of Chy4G075300.1 vs. NCBI nr
Match: XP_023532709.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 667 bits (1722), Expect = 2.44e-239
Identity = 332/393 (84.48%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1   MLSKFLRPILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLN 60
           M+ KFLRPILS+SR+    S PFQSL NP+LP +LH   LCS SP  S +LPPQ  +N +
Sbjct: 39  MIGKFLRPILSASRKRNPLSPPFQSLPNPVLPYNLHRRSLCSPSP--STVLPPQTPENFD 98

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
           LPI KVR+QTPLEKQFE+W+QKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH
Sbjct: 99  LPIQKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 158

Query: 121 SHLTYLTIIKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180
           + LTYLTIIKILI RRRYHLAETLVEEV+AGACEMSVPLYNSVIRFCC RK  FNRAFDV
Sbjct: 159 NDLTYLTIIKILICRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDV 218

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKP LETYAMLFN+LLRRFNKL+V YVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 219 YKKMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 278

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300
           NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV QGLEFYKEMRV
Sbjct: 279 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 338

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           +GL PSSSTYMILICSLAME RF+EAIE+CFDML  S APD+LTYRTLLEGLCREGRDS+
Sbjct: 339 KGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 398

Query: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393
           AFDLLDEL+KRDKLMNEKTF  LLNGLH VGR+
Sbjct: 399 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 429

[Close]

BLAST of Chy4G075300.1 vs. TAIR 10
Match: AT3G25210.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 472.2 bits (1214), Expect = 4.0e-133
Identity = 234/384 (60.94%), Postives = 296/384 (77.08%), Query Frame = 0


Query: 9   ILSSSRRPQLFSSPFQSLLNPILPSHLHPHFLCSLSPPSSALLPPQNSDNLNLPIPKVRT 68
           +L+S+ R +  S PF S       +HL   F    S P S   P            ++RT
Sbjct: 10  LLTSTNRSRNLSPPFLS----TAVNHLSLSFSSVSSSPESHTSP-----------SRIRT 69

Query: 69  QTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHSHLTYLTI 128
           +TPLE QFE+W+Q LKPGF+ SDV  AL+AQSDPDLALD+FRWTAQQRGYKH+H  Y T+
Sbjct: 70  RTPLETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTM 129

Query: 129 IKILIYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDVYKKMWKSD 188
           IK  I  +R +  ETL+EEVIAGACEMSVPLYN +IRFCC RK  FNRAFDVY KM +SD
Sbjct: 130 IKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSD 189

Query: 189 DCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYS 248
           D KP LETY +L +SLL+RFNKL+V YVYLH+VRSLTKQMKS+GVIPDTFVLNMIIKAY+
Sbjct: 190 DSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYA 249

Query: 249 KCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSS 308
           KCLEVDEAIRVF+EM LY  +PN+YTY Y+ KG+CEKGRV QGL FYKEM+V+G++P+ S
Sbjct: 250 KCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGS 309

Query: 309 TYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDEL 368
            YM+LICSL+MERR +EA+E+ +DML NS++PD+LTY T+L  LCR GR SEA ++++E 
Sbjct: 310 CYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEW 369

Query: 369 RKRDKLMNEKTFKTLLNGLHTVGR 393
           +KRD +M E+ ++TL++ ++ + +
Sbjct: 370 KKRDPVMGERNYRTLMDEVYFLNK 378

[Close]

BLAST of Chy4G075300.1 vs. TAIR 10
Match: AT2G27800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-54
Identity = 109/317 (34.38%), Postives = 191/317 (60.25%), Query Frame = 0


Query: 75  QFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHSHLTYLTIIKILIY 134
           +F   + KL P F+P ++ +A+  + DP L   LF W +QQ  + H + +Y   I+ L  
Sbjct: 125 KFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGA 184

Query: 135 RRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDVYKKM--WKSDDCKP 194
            + Y   + +V +V++     +  LYNS+I F   +  +  RA ++++ M   K+ +C+P
Sbjct: 185 AKMYQEMDDIVNQVLSVRHIGNENLYNSII-FYFTKAGKLIRAVNIFRHMVTSKNLECRP 244

Query: 195 TLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLE 254
           T+ TY +LF +LL R N   +++VY+ +VRSL +QM  SG+ PD F LN ++K Y   L 
Sbjct: 245 TIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLH 304

Query: 255 VDEAIRVFREMG-LYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSSTYM 314
           V++A+R+F +M  +Y C+PNS+TY Y+  GLC +GR     E   EM+ +G +P+  +Y 
Sbjct: 305 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 364

Query: 315 ILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKR 374
            L+ + A+    ++A++  ++M+ N    D ++YRTL++  CR+G+  EA  LL+ LR++
Sbjct: 365 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 424

Query: 375 DKLMNEKTFKTLLNGLH 389
            +L++  ++  L+N LH
Sbjct: 425 -QLVDRDSYDKLVNVLH 439

[Close]

BLAST of Chy4G075300.1 vs. TAIR 10
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-31
Identity = 88/312 (28.21%), Postives = 158/312 (50.64%), Query Frame = 0


Query: 82  KLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQ--RGYKHSHLTYLTIIKILIYRRRYH 141
           K     +PS V + ++A+ D + ++ +F     +   GY H   ++  ++  L+   ++ 
Sbjct: 9   KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68

Query: 142 LAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFD---VYKKMWKSDDCKPTLET 201
            AE L+  +    C +S  +  S+    C    R +R FD   V+ KM K  DC P+ + 
Sbjct: 69  AAEDLIVRMKIENCVVSEDILLSI----CRGYGRVHRPFDSLRVFHKM-KDFDCDPSQKA 128

Query: 202 YAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSK-CLEVDE 261
           Y  +  ++L   N+L++++ +        K M+  G+ P    LN++IKA  +    VD 
Sbjct: 129 YVTVL-AILVEENQLNLAFKFY-------KNMREIGLPPTVASLNVLIKALCRNDGTVDA 188

Query: 262 AIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSSTYMILIC 321
            +++F EM    C P+SYTYG +  GLC  GR+++  + + EM  +   P+  TY  LI 
Sbjct: 189 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 248

Query: 322 SLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLM 381
            L   +  +EA+    +M    + P++ TY +L++GLC++GR  +A +L + +  R    
Sbjct: 249 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 307

Query: 382 NEKTFKTLLNGL 388
           N  T+ TL+ GL
Sbjct: 309 NMVTYTTLITGL 307

[Close]

BLAST of Chy4G075300.1 vs. TAIR 10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 3.7e-30
Identity = 87/340 (25.59%), Postives = 157/340 (46.18%), Query Frame = 0


Query: 96  LQAQSDPDLALDLFRWTAQQRGYKHSHLTYLTIIKILIYRRRYHLAETLVEEVI------ 155
           ++ + DP LA   F+W+  + G+KHS  +Y  +  IL   R Y+ A ++++E++      
Sbjct: 116 VELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADC 175

Query: 156 -----------------------------AGACEMSVPLYNSVIRFCCARKCR-FNRAFD 215
                                         G  E ++  ++ + RF    K R  N    
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235

Query: 216 VYKKMWKSDDCK------------PTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQ 275
            + K+ K+DD K            PT+ TY ++ + + +  +        + + R L ++
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD--------VEAARGLFEE 295

Query: 276 MKSSGVIPDTFVLNMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGR 335
           MK  G++PDT   N +I  + K   +D+ +  F EM    C+P+  TY  +    C+ G+
Sbjct: 296 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 355

Query: 336 VEQGLEFYKEMRVRGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRT 388
           +  GLEFY+EM+  GL P+  +Y  L+ +   E   ++AI+   DM    + P+  TY +
Sbjct: 356 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 415

[Close]

BLAST of Chy4G075300.1 vs. TAIR 10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-28
Identity = 78/301 (25.91%), Postives = 139/301 (46.18%), Query Frame = 0


Query: 73  EKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHSHLTYLTIIKIL 132
           E +F+  + KL P F+P ++ +A+  + DP L   LF W +QQ  + H + +        
Sbjct: 116 ESKFQETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCS-------- 175

Query: 133 IYRRRYHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDVYKKMWKSD--DC 192
                YH+A                     + +   A+  +  RA ++++ M  S   +C
Sbjct: 176 -----YHIA---------------------IRKLGAAKSGKLIRAVNIFRHMVNSRNLEC 235

Query: 193 KPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKC 252
           +PT+ TY +LF +LL R N   ++++Y+ +VRSL +QM  SG+ PD F LN ++      
Sbjct: 236 RPTMRTYHILFKALLGRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFALNCLV------ 295

Query: 253 LEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSSTY 312
                                             KGR     E   EM+ +G +P+  +Y
Sbjct: 296 ----------------------------------KGRTINTRELLSEMKGKGFVPNGKSY 342

Query: 313 MILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRK 372
             L+ + A+    ++A++  ++M+ N    D ++YRTL++  CR+G+  EA  LL+ LR+
Sbjct: 356 NSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLRE 342

The following BLAST results are available for this feature:

BLAST of Chy4G075300.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSF5	5.6e-132	60.94	Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop...	[more]
Q9ZUY1	1.8e-53	34.38	Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop...	[more]
Q9FNL2	3.6e-30	28.21	Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX...	[more]
P0C894	5.2e-29	25.59	Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th...	[more]
Q9CAN6	5.4e-26	29.50	Pentatricopeptide repeat-containing protein At1g63070, mitochondrial OS=Arabidop...	[more]

BLAST of Chy4G075300.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8U7	5.1e-221	98.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G635360 PE=4 SV=1	[more]
A0A5D3DR42	2.5e-212	94.91	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4E2S7	2.5e-212	94.91	pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucumis ...	[more]
A0A6J1K5G5	3.9e-189	84.73	pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbit...	[more]
A0A6J1ETB4	1.3e-187	84.22	pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbit...	[more]

BLAST of Chy4G075300.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144398.1	1.39e-282	98.47	pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucumis sa...	[more]
XP_016902527.1	4.05e-271	94.91	PREDICTED: pentatricopeptide repeat-containing protein At3g25210, mitochondrial ...	[more]
XP_038888802.1	2.20e-258	90.84	pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Benincasa ...	[more]
XP_022995354.1	1.12e-240	84.73	pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita ...	[more]
XP_023532709.1	2.44e-239	84.48	pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita ...	[more]

BLAST of Chy4G075300.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25210.1	4.0e-133	60.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G27800.1	1.3e-54	34.38	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G46100.1	2.6e-31	28.21	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G02150.1	3.7e-30	25.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27300.1	2.0e-28	25.91	pentatricopeptide (PPR) repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 273..306 e-value: 1.1E-6 score: 26.4 coord: 309..341 e-value: 2.2E-5 score: 22.3 coord: 239..271 e-value: 1.3E-4 score: 19.9 coord: 344..372 e-value: 1.8E-5 score: 22.6 coord: 160..193 e-value: 6.9E-5 score: 20.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 235..283 e-value: 3.1E-12 score: 46.5 coord: 344..387 e-value: 6.1E-9 score: 36.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 308..335 e-value: 0.024 score: 14.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 156..192 score: 8.527949
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..305 score: 11.969797
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 341..375 score: 10.402331
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..340 score: 8.79102
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 236..270 score: 10.468099
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 302..392 e-value: 1.3E-17 score: 65.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 54..211 e-value: 1.1E-21 score: 79.3 coord: 212..301 e-value: 2.3E-20 score: 74.9
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 44..392
None	No IPR available	PANTHER	PTHR47938:SF2	OS06G0184866 PROTEIN	coord: 44..392

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy4G075300	Chy4G075300	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy4G075300.1.exon1	Chy4G075300.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy4G075300.1.cds1	Chy4G075300.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy4G075300.1	Chy4G075300.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding