Chy4G067500.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCGGGACCGTCCTGCGCTTGGCGGCGTCGGCACCGGCTCCTCCAAGTTGGACGTCACTCCCATCGATCGGAAGCGCATCAACGACGCTCTCGATAAACAACTGGAGCGATCCTCACCATCCACTTCTCGCACCGTCATTAACGGCAAGGATAATAAGCCCTCTGCACCTCAGTCCTTGTTAATGCCGAAGCCTCTTTCTGATCAGAGGGACTCTCGTTCTGCCTCTCTCTCTAAGACTAACTGCTCTGGTGGGTTCCTCTTTTCCTCTTTGTTTCTGTGTTTGTTTCGATTTTTTTTTTCTCGATTTTTCTTGTTTAGGTTACTATTCGAGTTCTTGTTAGTTTTTCAGCTGTTATTTCTCTGTTTGGGTTCAATTTTTAATTGGGGTTTTTTTAAGCTTTGTGTGCAAGATATGCATATCTCCCATTTGGTCTGTCTTATTGTGCTCTTCGTGTTTTCTATTGCTTGTGTTGTTTTGGGAATTCAAGGATCCGATAGAGCCTTCCCATGTTTAGATGGTTTCGAGTTTGATGTTCAGGTGTATTGCGTTAGCTGATATCAGCATTTCCAGGCCTTGTGCCTACGGAAGGGTGGTTTTCATCACTAACTTTAGCAATGGCGTATACTTCTCATGTCAGTGGCAGCTATTCCATTTTATAATCATTTTTGTTGTTTTAACCATCTTAAAGAGTGCCTTCCATTTTGTTAATTTTGTTTTGGTTGAGAAGAATCTCTCTGCTGCATTCTTTACATAGTTTCTAATGAAGTATTAATATGCTCAAAGTTCAATATGCGTGTGACTGCTGGTGTTTTCAAAAGGAAAGGCGTACTTCAACAAACTAAAATGTTAATGACAATGTTATAGCCTTTCAAGATGCGCTACTTGATCTCTTTTGTGGTGCATTTGGAACGAGAGAAATAGTAGCATTTTTTAAGATAAGTGTGATTCTTTTGATTCTCTTTGGACTTGGGTTCAACACACAACTTGGTTAAGTACCAATTACGCCAATCACTTTTTTAATTACAGCCATTGTATGATCTTTAACAATTGGAAGGTCTTTATTTACTAAAGTTTCTTGGGAAGGGTTTTCTTGACCCTTATCCTTAGGCTGTCTTCTTTTGTTCTCTTGAATACAAATATCAGTTTTTTATAAATAATAATAATAATAAATAAATTAATAAATTTCCCCATTGTTCGATTTTAAACAAGGGGAACAGCAGATCGGTAAAAAATTTTAAATTATTGGATTTGAAAGGATTTCTGAAACTTTTCCGTTCCCGCAAAGGATAAAGGTTTATTATTTGAGGGTAGAATTTAAGATTGTTGTTCATTTGTGTAACACTAGTTTTATGAAATACTGCCAGCAGAGTGTAAATTATTCACTTGATGCCATTGGCATTTGTACCCTACTTTTGTCAAATGAAAAATAATCTTATCACAGCTTAATTTCACTGATTGCTTATGGAGTTAAACCTGCAATACTTGATTAGAATGAATGTTGTCCCTGCATGTCGGTGTCAGACACGTGTAAGACACAGACACTTCATAAAAAATGATGTGTCCATACTTCCTAGCTGCTAGTTATTTTTTATTTTGATGACTGGCTAATGGGATGATAGGATAAGCTGAATGTTTATGGGAGTTTTTGTGACAATCTCATAAATGCTGCTATAGATGCTATTCAGGATAATTTGCTGACCAAGAACCTTCTCCAACCTTTTGTTGACTTGGCCATTCTTCTCTACTAGTACTATGAAACCAGTTCACATAGCATATTGCTAAGTACTCAATTGACAATAGTCATCATTATTGACCTGCAGAGCAATCATTCATAATTTTTGCCTTTTTTTGTCTGATTGTTTTGTTTTTGAAGTTAGACAAAATGTCATTTATAAATTACTTCAATATGATTGTGTTATATTTTGTTCATCTTTTTAACTCATAATCTTTTGGTTTAATTGCAGAGGAATCTGAGACTGACAGTGAAGAGTCAGATGTCAGTGGGTCTGATGGCGATGATACATCTTGGATTTCATGGTTTTGTAATCTGCGTGGAAACGAGTTCTTTTGTGAAGTGGATGATGACTATATACAAGATGATTTTAACCTCTGTGGGTTAAGCAGCCAAGTTCCATACTATGACTATGCTCTTGATTTGATTCTGGATGTTGAATCCTCTAATGGTATGGTTAATGCACTTTTAATTATTTTGAGATGTTCTTCATTGCTTTATTCAAGTGCACGCATTTCAAAGCAATAATTTAATGAGAGAGTCCTTTAGTTTAAATACATAAATCTAAAAATGCCTGGTAGGCGTGCTCTATGGTAGAGCTAAATGCCATTACAATAGTCAATAGTAATTATGTTTGTCTCTAAAAGATATTTTTGGCTTATCTTTTAGTTGTATATTTCAAAAAGACTTAATTTTCCAACTAGATTGCTCATGCTCCACAATACAAGGGAAGTCATTAATAGAATATTAAAAACCGGCAATTTGATGGGACGACAATTTAATTCTACGATATTTAATAAAAAGAAACTTCTAGAACATGAAATCCTTGGTTGGTGGCCATCATGGTTTTACCTTATTCTTTCTAATTCATAGCCTTTTCCTTGGCGACCAACCCATGGTGATTTGTGTATATTTCCTGTAATAATTATTAATATCTCCTTTGGTTTAATTGACAGTATTCACTTTCTAATTTCTCCTATAAAGGTATTTTATCTTCAATCTTCCATTTAGTTGTCAGTAGTCAGTAATCAATTGGAATGAGTGAATTGTGCAGGTGATATGTTTACAGAGGAACAGAATGAACTAGTTGAATCTGCAGCTGAAATGCTTTACGGTCTAATTCATGCGAGATACATATTGACAAGCAAAGGCATGGCTGCCATGGTGAGAATCTTCTTTCGGGTCCTCTATATATATGCTGCCAGTAATCAGAATAACCCATTATGATTTTCACAGCTGGACAAATTCAAGAATTATGACTTTGGGAGATGCCCCAGAGTTTACTGCTGTGGACAGCCATGCCTTCCTGTTGGTCAATCAGACATTCCTAGAGCAGGCACCGTCAAGATATACTGTCCAAGATGTGAGGATGTTTATTATCCTCGATCGAAGTTTCAAGGTAGTATCCTTAATTTTGATGATCTTATGTTCACCTTCTTGCATGCACGTTTTACATATGTTAATTTACATTTTTCATTAAAAAAAAAAAGAAAATAAAAACTTCTCATTGATATAATGAAAAGGGATACATGTTTAACGCAGAACTTTCATAGGTAGTTAAAAAGAAAAAAAAATACAATCACAAGACAACAACATAAAGGGAATAGACGTGCACAACTTATAATGAACAAGGAGCTTTTTCAATGACTGCTTAAAATACTTTGAGAGCTTGTGAATGAAAGCTGAAGCTGGATAAGGGCTCCACAAAATACTTATAATAGCCTGCTTCAATGATAGCCTACTTTAATCCTATCAAAGCTAATCATGAACTGGCCGCCATCAACCATCAAATATATCTTTAAAAACTAATCACATATCAGCTCATGTAACATCAACAGAATACATCTCAAGACCAGATAGATAACTTTTAGCAGGCTCCTAGCCTTCCCCCCATAAGCATTTTAAACACTGCAAGCTTAACATCTTCGATTCAGTAACATAATTGAGATGTTAAGTGGGCATCCGTAATTCAATAAATCCAAAATGGCCTTCACACTTCCTGGGTTAAGAAGTACCACAGATTCACACTTTCCAAGGCAATATGAGCATGAGTAAAAGAGCAATCACTGATTACTGCAATACACCCTTAATAAGGGTAACTTAAAGTCATCTCGTGAAAAGTTACTCCTTTAAAATCTTTTAACTTCGATGCTTCACTCAAACCAAAAGGCCTCGTGCAAATTAATGCTTTATAATTATCCTAGTGACCAGGATCGTATTGTTGAGTTCATTGAAATTCTTTTATAGATGAGATATTGTTACTAGGACTTGAAAGTTTGATTTCTTACTTGAAAAAAAAAAGAGGAAAAAAGTATCCTCTTTAGTACTTGGTCTAATGGGGCATTATTCTTGAAGGTTAGTTTTAACTTTTAAGTCATGTTCCTTTGGACTTGAATCACTTGATGGGTAATGGGAACATGTTACTATTTGAAAAGAAAAAGTGACATGATTGAACATGCAAATTAGAATCATGCGGTGGCCACATTTTTAAAGCTTCTATGGTGTAAAAAATGACATTTATAATAAACTTTTAAAACTTTCGGTTTGTGTTGCCTTTTCTTGGTGGAGGATGTCATAGCCATCAGTTCATCCGAACTGTCGATTGACTTTGACCATTAGGAAATATGGTAATTTGTGGATTAGACATGCTCAAACTGTATAACTCTCTCGTACTTTGAGTTTATTAACAATAAAGAAGCTTGTCTTCGTTTCAAAAAAAAAAATTATGGATTAGACATTGAAAAGTACAGTCTAATCATGTTTATTCTTGAAACTGATGTTACTTGATTTCCCGAATTTGTATACATGAATTTTAAGCCTAAACAATAATTGTGTTTCTCTCACTGACTTGCATTTTATAAGAATTTACTCTAGATGAACAGCAGTCTTGACAGGCTAATATTTTGGGTTACTTCATAAGTTTCTTTCTTCAACTCTATATAGACATTGATGGGGCTTATTTTGGAACTACATTTCCTCACCTCTTCCTGATGACATATGGACACCATAAGCCACAAAAATCCGTTCAGAGTTACGTTCCAAGAGTGTTTGGATTCAAGATCCACAAGCCATGA ATGCACCGGGACCGTCCTGCGCTTGGCGGCGTCGGCACCGGCTCCTCCAAGTTGGACGTCACTCCCATCGATCGGAAGCGCATCAACGACGCTCTCGATAAACAACTGGAGCGATCCTCACCATCCACTTCTCGCACCGTCATTAACGGCAAGGATAATAAGCCCTCTGCACCTCAGTCCTTGTTAATGCCGAAGCCTCTTTCTGATCAGAGGGACTCTCGTTCTGCCTCTCTCTCTAAGACTAACTGCTCTGAGGAATCTGAGACTGACAGTGAAGAGTCAGATGTCAGTGGGTCTGATGGCGATGATACATCTTGGATTTCATGGTTTTGTAATCTGCGTGGAAACGAGTTCTTTTGTGAAGTGGATGATGACTATATACAAGATGATTTTAACCTCTGTGGGTTAAGCAGCCAAGTTCCATACTATGACTATGCTCTTGATTTGATTCTGGATGTTGAATCCTCTAATGGTGATATGTTTACAGAGGAACAGAATGAACTAGTTGAATCTGCAGCTGAAATGCTTTACGGTCTAATTCATGCGAGATACATATTGACAAGCAAAGGCATGGCTGCCATGCTGGACAAATTCAAGAATTATGACTTTGGGAGATGCCCCAGAGTTTACTGCTGTGGACAGCCATGCCTTCCTGTTGGTCAATCAGACATTCCTAGAGCAGGCACCGTCAAGATATACTGTCCAAGATGTGAGGATGTTTATTATCCTCGATCGAAGTTTCAAGACATTGATGGGGCTTATTTTGGAACTACATTTCCTCACCTCTTCCTGATGACATATGGACACCATAAGCCACAAAAATCCGTTCAGAGTTACGTTCCAAGAGTGTTTGGATTCAAGATCCACAAGCCATGA ATGCACCGGGACCGTCCTGCGCTTGGCGGCGTCGGCACCGGCTCCTCCAAGTTGGACGTCACTCCCATCGATCGGAAGCGCATCAACGACGCTCTCGATAAACAACTGGAGCGATCCTCACCATCCACTTCTCGCACCGTCATTAACGGCAAGGATAATAAGCCCTCTGCACCTCAGTCCTTGTTAATGCCGAAGCCTCTTTCTGATCAGAGGGACTCTCGTTCTGCCTCTCTCTCTAAGACTAACTGCTCTGAGGAATCTGAGACTGACAGTGAAGAGTCAGATGTCAGTGGGTCTGATGGCGATGATACATCTTGGATTTCATGGTTTTGTAATCTGCGTGGAAACGAGTTCTTTTGTGAAGTGGATGATGACTATATACAAGATGATTTTAACCTCTGTGGGTTAAGCAGCCAAGTTCCATACTATGACTATGCTCTTGATTTGATTCTGGATGTTGAATCCTCTAATGGTGATATGTTTACAGAGGAACAGAATGAACTAGTTGAATCTGCAGCTGAAATGCTTTACGGTCTAATTCATGCGAGATACATATTGACAAGCAAAGGCATGGCTGCCATGCTGGACAAATTCAAGAATTATGACTTTGGGAGATGCCCCAGAGTTTACTGCTGTGGACAGCCATGCCTTCCTGTTGGTCAATCAGACATTCCTAGAGCAGGCACCGTCAAGATATACTGTCCAAGATGTGAGGATGTTTATTATCCTCGATCGAAGTTTCAAGACATTGATGGGGCTTATTTTGGAACTACATTTCCTCACCTCTTCCTGATGACATATGGACACCATAAGCCACAAAAATCCGTTCAGAGTTACGTTCCAAGAGTGTTTGGATTCAAGATCCACAAGCCATGA MHRDRPALGGVGTGSSKLDVTPIDRKRINDALDKQLERSSPSTSRTVINGKDNKPSAPQSLLMPKPLSDQRDSRSASLSKTNCSEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSNGDMFTEEQNELVESAAEMLYGLIHARYILTSKGMAAMLDKFKNYDFGRCPRVYCCGQPCLPVGQSDIPRAGTVKIYCPRCEDVYYPRSKFQDIDGAYFGTTFPHLFLMTYGHHKPQKSVQSYVPRVFGFKIHKP* Homology
BLAST of Chy4G067500.1 vs. ExPASy Swiss-Prot
Match: P40228 (Casein kinase II subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=CKB1 PE=1 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 7.3e-121 Identity = 226/300 (75.33%), Postives = 252/300 (84.00%), Query Frame = 0
BLAST of Chy4G067500.1 vs. ExPASy Swiss-Prot
Match: P40229 (Casein kinase II subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=CKB2 PE=1 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 3.4e-118 Identity = 218/295 (73.90%), Postives = 248/295 (84.07%), Query Frame = 0
BLAST of Chy4G067500.1 vs. ExPASy Swiss-Prot
Match: O80507 (Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana OX=3702 GN=CKB4 PE=1 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.3e-117 Identity = 212/293 (72.35%), Postives = 242/293 (82.59%), Query Frame = 0
BLAST of Chy4G067500.1 vs. ExPASy Swiss-Prot
Match: O81275 (Casein kinase II subunit beta-3 OS=Arabidopsis thaliana OX=3702 GN=CKB3 PE=1 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 1.9e-113 Identity = 203/294 (69.05%), Postives = 240/294 (81.63%), Query Frame = 0
BLAST of Chy4G067500.1 vs. ExPASy Swiss-Prot
Match: P67868 (Casein kinase II subunit beta OS=Bos taurus OX=9913 GN=CSNK2B PE=1 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.9e-66 Identity = 113/192 (58.85%), Postives = 143/192 (74.48%), Query Frame = 0
BLAST of Chy4G067500.1 vs. ExPASy TrEMBL
Match: A0A1S3CQ04 (Casein kinase II subunit beta OS=Cucumis melo OX=3656 GN=LOC103503484 PE=3 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 2.8e-168 Identity = 289/291 (99.31%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Chy4G067500.1 vs. ExPASy TrEMBL
Match: A0A0A0LFA7 (Casein kinase II subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G912360 PE=3 SV=1) HSP 1 Score: 599.7 bits (1545), Expect = 6.3e-168 Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Chy4G067500.1 vs. ExPASy TrEMBL
Match: A0A1S3CPZ5 (Casein kinase II subunit beta OS=Cucumis melo OX=3656 GN=LOC103503484 PE=3 SV=1) HSP 1 Score: 594.3 bits (1531), Expect = 2.7e-166 Identity = 288/292 (98.63%), Postives = 291/292 (99.66%), Query Frame = 0
BLAST of Chy4G067500.1 vs. ExPASy TrEMBL
Match: A0A6J1I852 (Casein kinase II subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111471806 PE=3 SV=1) HSP 1 Score: 576.6 bits (1485), Expect = 5.7e-161 Identity = 276/291 (94.85%), Postives = 284/291 (97.59%), Query Frame = 0
BLAST of Chy4G067500.1 vs. ExPASy TrEMBL
Match: A0A6J1EZR9 (Casein kinase II subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111438065 PE=3 SV=1) HSP 1 Score: 575.9 bits (1483), Expect = 9.8e-161 Identity = 276/291 (94.85%), Postives = 284/291 (97.59%), Query Frame = 0
BLAST of Chy4G067500.1 vs. NCBI nr
Match: XP_008465906.1 (PREDICTED: casein kinase II subunit beta-like isoform X2 [Cucumis melo]) HSP 1 Score: 599 bits (1545), Expect = 2.26e-216 Identity = 289/291 (99.31%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Chy4G067500.1 vs. NCBI nr
Match: XP_004148367.1 (casein kinase II subunit beta-1 [Cucumis sativus] >KGN60453.1 hypothetical protein Csa_002045 [Cucumis sativus]) HSP 1 Score: 598 bits (1542), Expect = 6.47e-216 Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Chy4G067500.1 vs. NCBI nr
Match: XP_008465905.1 (PREDICTED: casein kinase II subunit beta-like isoform X1 [Cucumis melo]) HSP 1 Score: 593 bits (1528), Expect = 9.16e-214 Identity = 288/292 (98.63%), Postives = 291/292 (99.66%), Query Frame = 0
BLAST of Chy4G067500.1 vs. NCBI nr
Match: XP_038888092.1 (casein kinase II subunit beta-1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 590 bits (1522), Expect = 7.81e-213 Identity = 286/293 (97.61%), Postives = 290/293 (98.98%), Query Frame = 0
BLAST of Chy4G067500.1 vs. NCBI nr
Match: XP_038888091.1 (casein kinase II subunit beta-1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 584 bits (1505), Expect = 3.17e-210 Identity = 285/294 (96.94%), Postives = 290/294 (98.64%), Query Frame = 0
BLAST of Chy4G067500.1 vs. TAIR 10
Match: AT5G47080.1 (casein kinase II beta chain 1 ) HSP 1 Score: 434.9 bits (1117), Expect = 5.2e-122 Identity = 226/300 (75.33%), Postives = 252/300 (84.00%), Query Frame = 0
BLAST of Chy4G067500.1 vs. TAIR 10
Match: AT2G44680.2 (casein kinase II beta subunit 4 ) HSP 1 Score: 430.6 bits (1106), Expect = 9.8e-121 Identity = 213/292 (72.95%), Postives = 242/292 (82.88%), Query Frame = 0
BLAST of Chy4G067500.1 vs. TAIR 10
Match: AT4G17640.1 (casein kinase II beta chain 2 ) HSP 1 Score: 426.0 bits (1094), Expect = 2.4e-119 Identity = 218/295 (73.90%), Postives = 248/295 (84.07%), Query Frame = 0
BLAST of Chy4G067500.1 vs. TAIR 10
Match: AT2G44680.1 (casein kinase II beta subunit 4 ) HSP 1 Score: 424.1 bits (1089), Expect = 9.2e-119 Identity = 212/293 (72.35%), Postives = 242/293 (82.59%), Query Frame = 0
BLAST of Chy4G067500.1 vs. TAIR 10
Match: AT5G47080.4 (casein kinase II beta chain 1 ) HSP 1 Score: 419.5 bits (1077), Expect = 2.3e-117 Identity = 222/300 (74.00%), Postives = 247/300 (82.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|