Chy3G056040.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACTGAACTGAAAGCAGCTTCTGAGGAAGTGAAAGTTGACCTATTTGAGGATGATGATGAGTTTGAGGAGTTTGAGATTAATGAAGGTGTGGCTTGTAATTATTTGTATTTTTTATTCCTTCCCTTGTTTGGATTCCTTTATTGCAGGTTTTAATTGCTCCCATTTTTCATTTATTACTGCCTGTTGTGCAAGATTTCTTTCTTTCAGCCAAATGAATGTGAATGTTATGCAACGGGCTGGAAATCCTGTTACTGACTCGATCCTAACTGCTAGTATTCTTCATTTGTATGGCTCGTTACTGTTGCTTGTTCATTCATTATTTCTTCATTTATCAATGAAGTAGCTCTGTCTGTCAAAAAAAAAAAAAACACATTGTTTTGTAGTAAAGTTGTGGAATCCAGTGTTTGAAACGAATAAGCCAGAATGTTTGTAAACTCAATTGCAATAGTAACAATCAATGAAAAAAGCATATTGATTATGATAAAGAAAAGTTGGATTAATGCATGGTTTTAAAAGACATGTCCCTCAAGTATATATTTGGATGGACCCATTTCACTTTAAAAATTAATCTATAAAAGCCTCTAGATGTTTGTTTGAAGTTAATATAGTGACTTATTTCTTGAAAAAAGTTTATAGAATTACTTCTTTTCTTGGAAGAAAAAAAGTTTGTTTGGAGTTAATTTCTTCTGTGACATACATTTTCCTTTTAAGCTCAGAAGTGCTTGAAGTGTTACATAAGGAGCTGATGGAATAGCTTTTGAACGGAGTTCATTCAGATTTTGCTTTGATTACTTGAAATGGTCTTGGAAGAGTAAACTTTTTCCAACATATATTCCTCAAAAAAAAAAGAAAAAAAAAGAAAGAAGAGAGAGAGATAGATGACCACAAAACCACTTCTCTTTGTTCAGTGAAAGTGGGCGCTTTTCTTTATTTTTCAGACATGGTTACGGTTACTTGATTGTTAGGAAGATAATAAACAATTTTTTTGTTTTGTATTCAGACCATATGGTTGCTCGTTGATGTTGTCAACTGAAACTATGATTTGACGGTCCTACAAGTCTTGCATATGTGACGTTAGCATAACACTGTTAATTGTTAACTTAATGTTGTATGTTCTATACATGTCATGTCACAATCGCAATGTGTTAGCAAAAAATGGTTGTTTGGAAATGAAGTGAAAGATTTGATGAGATTGCCATTTTGATCGTGTCTGAGAGCTTTTATGTATTTATTATCATTACTTCTTTTTATCTAAATAAAAGTGTTTAGGTTTCTTAAGTGCACCTTGATTGATCTCACGTTAAATTAGATTTATAGCATGTCACTGTCAAGTAACGCATGAGATTTTTTATATGTACGCAATGATCATGAGGTCTTTGAACACATCCGTCCGAAAGAACTTTTTACTTATTCAAATGCTCTTGGGGAATAGTAAGGCAAGTCGTGGTGGTTCTTATTTGAGAGGACATAGAAGTTAGAACACTGTAATATTGATGCTAATCAGATAACTTAGAGATCTTTTCCTCCTTTGCAAAGTTATCTTGCAACACTAATATTTCCTCAGATTCTGGTGTAAAGCTTATTACTCTTCTTGTTATTCTTAGCCTAACATCTTTAAGCCTTGTGATATTTTTATAATCTTTCCTTCTGATTCTCCTTGGTCAAAATGGATTACAGAGTGGGAAGTGAAGGAAGGCAAAGAAATCACTCAGCAATGGGAAGATGACTGGGATGATGATGATGTTAATGATGACTTCTCGTTGCAGCTGAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGAAGAGAATCTAGGCACTTTCCTTTTATCTGTCAAACATTTATGTTTAATTTGCACTGTTTGACCTTCAAAGATGGTTTTATTATGCCTTCTATCACTCAAATAGTGTCATTAAAGTAGGCATATTGAATACCTATGGCCTCATTGTACGGCGATTAGAGATTAATTACGTTATAACATGGTAACCAGAATTTGAAGTTTTACTAATTTTTTGAAGTTGAGTAATTGTTCATGCTAATCATAGTGTAAACTGATTATGTAGGGTAGAAAATGGGGGAAAAGCTCATTATGTAAAATTGAAAAAACCAGGAAGAATTTAAGCAATTGAAGTATAGACTGTTTGAACGATATAATTGTTTAAGAAAGTCAAATTTTAATGACAATAAATTTTTATTACTATCTTATTCAACCAGGAACATACCAAATTTACCACGTCTTCTTGGTTGGCTTTATTGTAAAAATTTTAAGACTCCAAAGTAGTTTTATGAAGCAAATTTAATATAATTAGGGTTTGAATGATTCTAACTTAAGGTAGATGACAATGTACATTGATATTAATACTAGATTGACAAGGTGTACTTGTCTTTGTCTAACAAGTCTCAATCCACTGTTTATGTGAGATATAAATAAATATAGAATAAATATATTATATCATACTCGTTTTTGTCAAACTTGGGACTACATGTAGTCTTTTGCAACAACATGTTCTACCATGATGGAGAGCGAAAGAAACATTCAAACTCACACTTAACAAATTTCTCTATCCAAATAGCCCAACAAGAACCATTTGAATTCAATACACAACTCAGATATTTTGAAATAAAATGAGAGAAACTATCAACCGAAACAGAAAAATACAGTGAATTTACTTGGTCACTCTGAAATACTCAAAAAAGAAAAGCATCAATGCTCCTAGTTTAATTCTTCTTAGCGGCAAAAATATAGCTCACGACCCACACATATTTTCTTTTTATTTTTTTCAATGAATCTCCAAATTTAGCCATTGAAATTAATTCACCTCCCACGAAGGAAATCACAATCTTTCTTCAATGTCCGGTAAAAAAAGGAAGTGAGCTTTCTAATTCAAATTCCCAATGTGAGTGATTTTAATTTTCACCATAATTAGACTTGTCCCATTGGTTGAGATAAATTTTGCCTCGAGATTCTAACATCCACAACACAAAGACGGAATCCATGTTGATAGTGAGTCTCCTTCTGCTTTGGTAGCATACAATAAATGGAAGAAATACCCAAAAAAAAAATTCCCTTCCAAAGCAATTTTGGAACCTTAAACACTATTATTATCATTGGATGTACCACAGACATTTGGATACTTACTCAAGTCAATGAAGTCTACTCTGCTCTTCCCATTCTTAATTTTTCTCATTTAATTCAGGCCAAGAGTTTTGGGAATGTAATTGCAAGAAAGCTCACACAATGGTAATGGCGAAAAAGGAAAGGTAAAGTCCACTATTTGTTCACTTTATGCTTTATGGGTAAGAAAGTATTGTAGTATTGTCCTCAAATAGAGATAGCACTGCTGAAATAAAGGAGAGGGACACTCTAAAAGCAAAAGAGAAAGGTAAATAAATTTCATTTGCTAAACATATTCTTCTGTTTTCTATCATACTACGAAAACAGAGAGGAATTTGTCATCACCAAAGTTTAAAGTAACTATGGGGACACACAAAAAGCAAAAGAAAAATGTAAGAAACATATTGTGTGTCACCACAGTTTAAAGTAACTAGGGATGGTCAGCACAATGTGAGGAATTTGGAGAGCATTTCATTGATAGAGACCCTGCTTGCTTCAATGTCCTTCATTTTCTTCGAACCAGCGAGCTTCTTGTTCCTCCAACCATTCCCGACGCGCTTCTCTTTAGGGAAGCTCATTACTATGGACTTCTAGACCAGGTTTGCTCGGCCAGAAACATCGAGTTAGACGGTGAGAATCTCAAACTTGCATCATCCATAATTGGTAGAACTTTGCTGAAAGATAATTCATTGATCAGAGCAAGTGCCAATGGTAGTTGCTCATTTGCCAATGGCACAGTTCTTCATGCCTATGATTGGATGCTCCAAGAACTCTCAATTGGAAACCTTGATTCTATGAAGATTGTGGATATGGAGTGGTATGATTTAGAAAACATCTTAATCAGTTGTCAAAAGCAATCAAATCCAAACACTATTGGTGATGTTAATGATGGAATTATTGGTCTCTTCAATCCACAAACTGCTGAACCTAAACATATATTTCTGCTCACTCAAAGTCGAAGTTCGTCGTGTTCTAATAAACCTGCTTATAGAGGATGTGATCAATTTTTGATAATGAAACCCGGATATTTAGCAATCAACAACTCAAACAACAAAATATTTTGTTGTTGTATAGATACCTACTACACAAAAGTGGATGGCATTGAAGTTTGGGACACAACGACGGGGCAGCAGATAGATTTCATAGAAAGTATACCCAATAGTGAGCTTGGCAACACCTTCAAGCTTCAATGGCTAACAAGTAACAACTGTTTAATAGCAGCGATTCACAGTCCTCAAAGCAATATAATAAGCATATTTGATCCGAGAACAAGAGAAACGCATTCGGGTCAATGGGAACACAATCCATACATGATGACACATGAAGAAGCATTAGTAGATGCAATGGGGATTGAGGAAATGCAGTGTGTTTGTGTAATGGATGGGACTGGTTCTTTTGGCTTTGTGGATTTGAGAAAGCTTGAAGGGGAATCTCAAATGAACAAATTTTTGAGGAGCTTGGAAGAATGA ATGGCAACTGAACTGAAAGCAGCTTCTGAGGAAGTGAAAGTTGACCTATTTGAGGATGATGATGAGTTTGAGGAGTTTGAGATTAATGAAGGCCAAGAGTTTTGGGAATGTAATTGCAAGAAAGCTCACACAATGGTAATGGCGAAAAAGGAAAGAGATAGCACTGCTGAAATAAAGGAGAGGGACACTCTAAAAGCAAAAGAGAAAGCACAATGTGAGGAATTTGGAGAGCATTTCATTGATAGAGACCCTGCTTGCTTCAATGTCCTTCATTTTCTTCGAACCAGCGAGCTTCTTGTTCCTCCAACCATTCCCGACGCGCTTCTCTTTAGGGAAGCTCATTACTATGGACTTCTAGACCAGGTTTGCTCGGCCAGAAACATCGAGTTAGACGGTGAGAATCTCAAACTTGCATCATCCATAATTGGTAGAACTTTGCTGAAAGATAATTCATTGATCAGAGCAAGTGCCAATGGTAGTTGCTCATTTGCCAATGGCACAGTTCTTCATGCCTATGATTGGATGCTCCAAGAACTCTCAATTGGAAACCTTGATTCTATGAAGATTGTGGATATGGAGTGGTATGATTTAGAAAACATCTTAATCAGTTGTCAAAAGCAATCAAATCCAAACACTATTGGTGATGTTAATGATGGAATTATTGGTCTCTTCAATCCACAAACTGCTGAACCTAAACATATATTTCTGCTCACTCAAAGTCGAAGTTCGTCGTGTTCTAATAAACCTGCTTATAGAGGATGTGATCAATTTTTGATAATGAAACCCGGATATTTAGCAATCAACAACTCAAACAACAAAATATTTTGTTGTTGTATAGATACCTACTACACAAAAGTGGATGGCATTGAAGTTTGGGACACAACGACGGGGCAGCAGATAGATTTCATAGAAAGTATACCCAATAGTGAGCTTGGCAACACCTTCAAGCTTCAATGGCTAACAAGTAACAACTGTTTAATAGCAGCGATTCACAGTCCTCAAAGCAATATAATAAGCATATTTGATCCGAGAACAAGAGAAACGCATTCGGGTCAATGGGAACACAATCCATACATGATGACACATGAAGAAGCATTAGTAGATGCAATGGGGATTGAGGAAATGCAGTGTGTTTGTGTAATGGATGGGACTGGTTCTTTTGGCTTTGTGGATTTGAGAAAGCTTGAAGGGGAATCTCAAATGAACAAATTTTTGAGGAGCTTGGAAGAATGA ATGGCAACTGAACTGAAAGCAGCTTCTGAGGAAGTGAAAGTTGACCTATTTGAGGATGATGATGAGTTTGAGGAGTTTGAGATTAATGAAGGCCAAGAGTTTTGGGAATGTAATTGCAAGAAAGCTCACACAATGGTAATGGCGAAAAAGGAAAGAGATAGCACTGCTGAAATAAAGGAGAGGGACACTCTAAAAGCAAAAGAGAAAGCACAATGTGAGGAATTTGGAGAGCATTTCATTGATAGAGACCCTGCTTGCTTCAATGTCCTTCATTTTCTTCGAACCAGCGAGCTTCTTGTTCCTCCAACCATTCCCGACGCGCTTCTCTTTAGGGAAGCTCATTACTATGGACTTCTAGACCAGGTTTGCTCGGCCAGAAACATCGAGTTAGACGGTGAGAATCTCAAACTTGCATCATCCATAATTGGTAGAACTTTGCTGAAAGATAATTCATTGATCAGAGCAAGTGCCAATGGTAGTTGCTCATTTGCCAATGGCACAGTTCTTCATGCCTATGATTGGATGCTCCAAGAACTCTCAATTGGAAACCTTGATTCTATGAAGATTGTGGATATGGAGTGGTATGATTTAGAAAACATCTTAATCAGTTGTCAAAAGCAATCAAATCCAAACACTATTGGTGATGTTAATGATGGAATTATTGGTCTCTTCAATCCACAAACTGCTGAACCTAAACATATATTTCTGCTCACTCAAAGTCGAAGTTCGTCGTGTTCTAATAAACCTGCTTATAGAGGATGTGATCAATTTTTGATAATGAAACCCGGATATTTAGCAATCAACAACTCAAACAACAAAATATTTTGTTGTTGTATAGATACCTACTACACAAAAGTGGATGGCATTGAAGTTTGGGACACAACGACGGGGCAGCAGATAGATTTCATAGAAAGTATACCCAATAGTGAGCTTGGCAACACCTTCAAGCTTCAATGGCTAACAAGTAACAACTGTTTAATAGCAGCGATTCACAGTCCTCAAAGCAATATAATAAGCATATTTGATCCGAGAACAAGAGAAACGCATTCGGGTCAATGGGAACACAATCCATACATGATGACACATGAAGAAGCATTAGTAGATGCAATGGGGATTGAGGAAATGCAGTGTGTTTGTGTAATGGATGGGACTGGTTCTTTTGGCTTTGTGGATTTGAGAAAGCTTGAAGGGGAATCTCAAATGAACAAATTTTTGAGGAGCTTGGAAGAATGA MATELKAASEEVKVDLFEDDDEFEEFEINEGQEFWECNCKKAHTMVMAKKERDSTAEIKERDTLKAKEKAQCEEFGEHFIDRDPACFNVLHFLRTSELLVPPTIPDALLFREAHYYGLLDQVCSARNIELDGENLKLASSIIGRTLLKDNSLIRASANGSCSFANGTVLHAYDWMLQELSIGNLDSMKIVDMEWYDLENILISCQKQSNPNTIGDVNDGIIGLFNPQTAEPKHIFLLTQSRSSSCSNKPAYRGCDQFLIMKPGYLAINNSNNKIFCCCIDTYYTKVDGIEVWDTTTGQQIDFIESIPNSELGNTFKLQWLTSNNCLIAAIHSPQSNIISIFDPRTRETHSGQWEHNPYMMTHEEALVDAMGIEEMQCVCVMDGTGSFGFVDLRKLEGESQMNKFLRSLEE* Homology
BLAST of Chy3G056040.1 vs. ExPASy Swiss-Prot
Match: O65555 (BTB/POZ domain-containing protein At4g30940 OS=Arabidopsis thaliana OX=3702 GN=At4g30940 PE=2 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 4.1e-45 Identity = 116/336 (34.52%), Postives = 176/336 (52.38%), Query Frame = 0
BLAST of Chy3G056040.1 vs. ExPASy Swiss-Prot
Match: Q9ZUH1 (BTB/POZ domain-containing protein At2g24240 OS=Arabidopsis thaliana OX=3702 GN=At2g24240 PE=2 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 6.6e-43 Identity = 116/336 (34.52%), Postives = 169/336 (50.30%), Query Frame = 0
BLAST of Chy3G056040.1 vs. ExPASy Swiss-Prot
Match: Q9FL96 (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 2.1e-04 Identity = 26/30 (86.67%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of Chy3G056040.1 vs. ExPASy TrEMBL
Match: A0A6J1KBH7 (BTB/POZ domain-containing protein At4g30940-like OS=Cucurbita maxima OX=3661 GN=LOC111493963 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.9e-134 Identity = 249/342 (72.81%), Postives = 272/342 (79.53%), Query Frame = 0
BLAST of Chy3G056040.1 vs. ExPASy TrEMBL
Match: A0A6J1G3M9 (BTB/POZ domain-containing protein At4g30940-like OS=Cucurbita moschata OX=3662 GN=LOC111450463 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 2.7e-132 Identity = 247/342 (72.22%), Postives = 270/342 (78.95%), Query Frame = 0
BLAST of Chy3G056040.1 vs. ExPASy TrEMBL
Match: A0A0A0KGR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358060 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 3.3e-106 Identity = 200/254 (78.74%), Postives = 203/254 (79.92%), Query Frame = 0
BLAST of Chy3G056040.1 vs. ExPASy TrEMBL
Match: A0A6J1DFZ3 (BTB/POZ domain-containing protein At4g30940-like OS=Momordica charantia OX=3673 GN=LOC111020714 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 2.2e-86 Identity = 182/339 (53.69%), Postives = 215/339 (63.42%), Query Frame = 0
BLAST of Chy3G056040.1 vs. ExPASy TrEMBL
Match: A0A443PK41 (BTB/POZ domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02029200 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 4.4e-50 Identity = 122/321 (38.01%), Postives = 179/321 (55.76%), Query Frame = 0
BLAST of Chy3G056040.1 vs. NCBI nr
Match: XP_038885891.1 (BTB/POZ domain-containing protein At4g30940-like [Benincasa hispida]) HSP 1 Score: 501 bits (1289), Expect = 2.05e-172 Identity = 258/345 (74.78%), Postives = 276/345 (80.00%), Query Frame = 0
BLAST of Chy3G056040.1 vs. NCBI nr
Match: XP_022999682.1 (BTB/POZ domain-containing protein At4g30940-like [Cucurbita maxima] >XP_022999683.1 BTB/POZ domain-containing protein At4g30940-like [Cucurbita maxima] >XP_022999684.1 BTB/POZ domain-containing protein At4g30940-like [Cucurbita maxima]) HSP 1 Score: 484 bits (1247), Expect = 4.81e-166 Identity = 249/342 (72.81%), Postives = 272/342 (79.53%), Query Frame = 0
BLAST of Chy3G056040.1 vs. NCBI nr
Match: XP_023546759.1 (BTB/POZ domain-containing protein At4g30940-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546760.1 BTB/POZ domain-containing protein At4g30940-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546761.1 BTB/POZ domain-containing protein At4g30940-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 482 bits (1241), Expect = 3.91e-165 Identity = 249/342 (72.81%), Postives = 271/342 (79.24%), Query Frame = 0
BLAST of Chy3G056040.1 vs. NCBI nr
Match: KAG6599103.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 482 bits (1241), Expect = 3.91e-165 Identity = 249/342 (72.81%), Postives = 272/342 (79.53%), Query Frame = 0
BLAST of Chy3G056040.1 vs. NCBI nr
Match: KAG7030040.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 483 bits (1244), Expect = 7.40e-165 Identity = 250/342 (73.10%), Postives = 271/342 (79.24%), Query Frame = 0
BLAST of Chy3G056040.1 vs. TAIR 10
Match: AT4G30940.1 (BTB/POZ domain with WD40/YVTN repeat-like protein ) HSP 1 Score: 183.7 bits (465), Expect = 2.9e-46 Identity = 116/336 (34.52%), Postives = 176/336 (52.38%), Query Frame = 0
BLAST of Chy3G056040.1 vs. TAIR 10
Match: AT2G24240.1 (BTB/POZ domain with WD40/YVTN repeat-like protein ) HSP 1 Score: 176.4 bits (446), Expect = 4.7e-44 Identity = 116/336 (34.52%), Postives = 169/336 (50.30%), Query Frame = 0
BLAST of Chy3G056040.1 vs. TAIR 10
Match: AT5G45010.1 (DSS1 homolog on chromosome V ) HSP 1 Score: 48.5 bits (114), Expect = 1.5e-05 Identity = 26/30 (86.67%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of Chy3G056040.1 vs. TAIR 10
Match: AT1G64750.1 (deletion of SUV3 suppressor 1(I) ) HSP 1 Score: 44.3 bits (103), Expect = 2.8e-04 Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of Chy3G056040.1 vs. TAIR 10
Match: AT1G64750.2 (deletion of SUV3 suppressor 1(I) ) HSP 1 Score: 44.3 bits (103), Expect = 2.8e-04 Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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