Chy1G009570.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy1G009570.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Asp_protease domain-containing protein
Location	chrH01: 9477434 .. 9481783 (-)
Sequence length	600
RNA-Seq Expression	Chy1G009570.1
Synteny	Chy1G009570.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACAACCCAGGACCCCGTCGAAGAATGTTTTGCAACCTTGGAGGGAAAATTGGATGAAGTGCAGAAGCAAGTAAGCGAGAAGAGCAGGTTGATGGAGGAGCTAATCAAGGATAACGTTGAAGTCTCAAAAGCCGTTAGGGAAATGATTAATGACCTTTGAGACACACACGGTAAGGATATCTACGACCTCCTTGTTGAGGTAACCAACATGCGCAAGTTCGTGGAAGAGGAGCTCCATGCCTTGCGTAAGGACATCGATGAGGTACATACTGAATGTCTATCTAGACATAATGCTAATGGTATGGCATCCACTAGCACATCACACACCATGGCTATCCCTCATCATATAAAAGTGTCAAGGCCCGATATGTATAACGACACGAGGAATGCACGATGGTGGCGAACTTCCTATTCGACCTTGAGCAGTATTACGAGGCCTTAGGAATCGTCGACTATGGTGCCAAAATAGCGAATCTCCCAAATTTTCTACGCGAATAGGCACAACTTTGGTGTGGAACGAGAGAAGGACCGAAGCATCTTGAGAACGTGGGAGCAATTCAAAGGTGAGCTTCGTAAACACTTTGTCCCACATAATGTAGAGATGGAGGCCCGTGGCAAACTCAGACGGTTGAGGCAAACCAGAAGTATTCCCTAGTACGTGAAGGAATTCACAACCCTCATGCTAGAGATCGATGGCATGTTCGACAAAGACGCACTCTTTCACTTTAGAGATGGTCTCAAGGACTGGACAAGACTTGAGCTCGACCGACGAGATGTGCAGAATCTTGATGATGCCCTTGCCGCTGTCGAGACGCTCACAGATTACAAATCCAAGGAGAAGAGAACCAACGAAATTGAAGGAGAAGTGTCGGAGTCGAGAGCGCAACATGTTCATAAAGCGAGGGAAAGCCACAAGAATAGTGGAAGGCATGGAAAAGTCATTAAAAGGAAAAAAGGTACATCTCTTAAAACTCCTAAATCTTGTTTTCTCTGCAACGATCCACATTGGACAAGGGATTGTCCACAAAAGAAAATATTGAGTGCATTACTGGCCAATCCACATGGAGAGGAAGAAGCACCCAAAGAGGCACACTTGGGAGGAATGCAATACCTCAGTGCCATAAAAATGGGCCCTTCTTCAAATAAACCCACGAAGAGAGGTTTATTGTACGTGGACGCCACACTCAACGACTAGACTGCCTTAGCATTGCTGGATACAAGCACAACCAGCAACATCATAGATCCAGAAGAGGCGAAGCGGCTAGGCCTCAGGATCATAAGGAGAGACAACATTGAGTTGAAGATCATCAATGTCGAACCTACGCGCAAATTTGGATGGGCTTGGAATGTCAAGGTGAAGATAGAAGAGTGGAAAGGTAAAGTTGATTTCCTCGTAGCACCTCTTGATGACTATAAGATTGTCCTAGGGTTAGACTTCATGAAACAAGCTCATGCCTACTTCGATGCCACAAGGGAGACCCTAGTTTTTCCCTACAAGGAGAGGGAGGTGTCGCTCAAATACATAGAAATGACAGGAAAGGTCATACTGAAATCTATGCAGACAAGAAGACACCGAAAAGGGAAAGGGTCACGTGGTAATGTCGCAACGAGGATGTTGCGAAGGTTGAGTGGGGGAGGATGTCACGTCCCACGAAATGACCCTACTTTTTGCTCCAAAACGAGCTATAAGACTCCCAAAGCAAAGCCAAGGAGGAGCCAAGCACACCTGATAAACAGCCCAACACAGCCATGTGACAGCCCACATGTGCCCACGACACATGCTCATGGCATTAGCTTGTGCCTACGGAAGGCAGCCCTCGAGCCTCGCATGCATGTCATGACATGTGCCCACGATAGCCCCATGTGCTTGTACGGACGCACACCCCATGGGCACGACCATCAGACAGGTGTCAGAAACCAATGCCACCCAGACAGCCCATGTGCACGGGCAGCTGCACATGGCACGACAACCGTCCACCAAGGGCGCAAACCGGCACCCACGCCTACTAGACGGTTGCCCATGCCAAACATAGCATCGCGCACGGACATCGACACACGCACGCACATGTACAAAAGGCTCTAGAAGGCCAGCGCGGGCACCAAATGTCCAAGAAGGCTCTAGAACCTCCCTAACATGCCCAGTGTCATGTACGCTTGGGACTTTTCTAGAATAATTTTGCCGACCTTGTAAGACGGTTTAGGGTTAGTAAGTCAGTTGTATAGCATCTATAAATACCCCAAATGGATTCATTTGTACTCAGTTCACGAAATCTCAAATAAAGGCTCTCTTAGACATTTTATCAAACACCTTGTCTACACTTTCTCCATCACTCTCTTGCCTAACCCTTTACGTTTTCTAGGTGCCATTGTTGCACTAATCATCTTTCGCTATCATACTTCTTGATGTTATTCATAGTGCTTGGTGCACTAACCTCTCTAAAGGTTTACTTGGCTACTTAGGGCGACTTAATCAAACCAAGTGCTGCACGGTTGGTTAGTTGAAAACTCTAACCGTGTGGCATTAAGCTTGGAACAATTCTATGTTGGGTGATCTCCTGACCTCTCGGGAATCTTTTTAGAATGCATGTGAGTGAGAAAAAACCATGTTGAAAGGACTCATGGTGGTTTGTAGAGACAACTTTTGCTCTAAGTAAAGATGATGTTGTAAGGTCGTAGGAAATGCAAAGAAATGTTAGAGTCGTCAGTTTTCAAATCTCTAACCGACAAGGATATTTTTTTAACTTTTTTGTTTTTATAAAGTTTAAAGTATTTTTGAAACTTTTGAAACAAAATACAAGGTTTAGAGGCTATTTGGTATAATTTAGCATTTTAAACTAATTAATAATTAAAACCAAAATTGAATGCGAGTATTTAGTGAAAAAATTCGAGGTTTTAAAAGTGTAAACTTGAAATTGAAGTACCAAAATTAAGCAAATTAACTAAAAACTCAAGGACTAAAAGTGTACTATTTTCAAACTTAGAGACCAAATAAAAATTTGACCTAAACCCTAGTGGCCAAAAGGCTTTTTTCCCAAAAATAATTGAGACGAAATCGACCAAGAATGGTGAATTAAAAAAGACACTATCTTGAATGAACATATTAAAGATCTAACGTTAGAAAGATGAAGAAACCTCATAATGTTTATCATTTACATAAACGAGAACAAAACCTCATGTTTGTCTACCAAAGGAGATCTAGCTAGTTTGAAATGTCCAAAATTTAAAGAGAGGGATATGAATGAACCAATATCACCTCTAAATAAGAAAGGTTTGAGGATACAAAAGTATGGTTAGAAAGACTTAAAAAAAACTGAAAGTTACTACCTATACTAACAAGGTTTAATATCTTTTTCACTGCTTAATTATAGGAACGACTCTAGTAGTTAAGCACGCTTAACTTGAAGAAATAATCCTATGTTTGGCGACCTTCTAGAATTTTCGTAGGATACACGTAAGTGAGAACAAAGCATATCCTGAAACGACCTCATGTTGATTTATGGTGTTAGTAGAGTCTTCACTCTTAGAACCAATTCAAGACACTACAACAAAATTTGTCTGCTATGACAGTTGTGTATCTCACAAAATGGGAGGGAGAAGAAAAAACTGTCACAAATTGGAAAATTTCACGTTTTTGGCGGGAAAAGACAGAATTTTTCGGATAACACTTTCCGCGACAATTATTTGATGTCATAGAATGTTACCATTAAATAATTTATTATTTTATATTAAAAAAAGAATAAATTAAAATTACAACTTTATATTTAAAAAAAAAAACAATTTCCCCAAATCTAAACCCTTAATTTTTCCCCAATCCACCCTTAATCTTCTCCATTCCTCCCGTGCGCGAAGTATCTCCAATCCGGCCATCTTCCTCCCCGTCGCCACTACCGCCCCCTCATGCCCGTCTGTTCAATCCAGCGCTGCCACAACCTCCTCAACCTTTTCAATTTGTACTCGTCTTCTCCAAACCTCCGCAATCACTTCAAACTTCGAACCGTGGTCGTCACCCCCTTCGCCGGTAAGATTCTATTCCTTATCTCTTTCTCTCTCTCTCTATGAAGTTCTTCTCTCAAATTTGTTCCTGCAACTCCATGGGATTGTTTTGTGATTTTGAGTTCTTCATAATTTCTCTTTTCTAATTGTTGATTTTCTGTTATATGGTCTCTAATTCGTTCCTGCAACTCCATGGGATTGTTTTGTGAGTTTGAGTTCTTCCCATTTTCTCTTTTCTAATTGTTGATTTTCTATTATATCGGTAAGTAAAATCCCTAAAGAAAATGGTGGATTTCTCTTGAAATTTCTGGCAGTGTTGAGGAGTTTTAGATACTGTACATTGGGTCATTAG

mRNA sequence

ATGTCGACAACCCAGGACCCCGTCGAAGAATGTTTTGCAACCTTGGAGGGAAAATTGGATGAAGTGCAGAAGCAAGATATCTACGACCTCCTTGTTGAGGTAACCAACATGCGCAAGTTCGTGGAAGAGGAGCTCCATGCCTTGCGTAAGGACATCGATGAGACTGCCTTAGCATTGCTGGATACAAGCACAACCAGCAACATCATAGATCCAGAAGAGGCGAAGCGGCTAGGCCTCAGGATCATAAGGAGAGACAACATTGAGTTGAAGATCATCAATGTCGAACCTACGCGCAAATTTGGATGGGCTTGGAATGTCAAGGTGAAGATAGAAGAGTGGAAAGGTAAAGTTGATTTCCTCGTAGCACCTCTTGATGACTATAAGATTGTCCTAGGGTTAGACTTCATGAAACAAGCTCATGCCTACTTCGATGCCACAAGGGAGACCCTAGTTTTTCCCTACAAGGAGAGGGAGGTGTCGCTCAAATACATAGAAATGACAGGAAAGGTCATACTGAAATCTATGCAGACAAGAAGACACCGAAAAGGGAAAGGGTCACGTGTGTTGAGGAGTTTTAGATACTGTACATTGGGTCATTAG

Coding sequence (CDS)

ATGTCGACAACCCAGGACCCCGTCGAAGAATGTTTTGCAACCTTGGAGGGAAAATTGGATGAAGTGCAGAAGCAAGATATCTACGACCTCCTTGTTGAGGTAACCAACATGCGCAAGTTCGTGGAAGAGGAGCTCCATGCCTTGCGTAAGGACATCGATGAGACTGCCTTAGCATTGCTGGATACAAGCACAACCAGCAACATCATAGATCCAGAAGAGGCGAAGCGGCTAGGCCTCAGGATCATAAGGAGAGACAACATTGAGTTGAAGATCATCAATGTCGAACCTACGCGCAAATTTGGATGGGCTTGGAATGTCAAGGTGAAGATAGAAGAGTGGAAAGGTAAAGTTGATTTCCTCGTAGCACCTCTTGATGACTATAAGATTGTCCTAGGGTTAGACTTCATGAAACAAGCTCATGCCTACTTCGATGCCACAAGGGAGACCCTAGTTTTTCCCTACAAGGAGAGGGAGGTGTCGCTCAAATACATAGAAATGACAGGAAAGGTCATACTGAAATCTATGCAGACAAGAAGACACCGAAAAGGGAAAGGGTCACGTGTGTTGAGGAGTTTTAGATACTGTACATTGGGTCATTAG

Protein sequence

MSTTQDPVEECFATLEGKLDEVQKQDIYDLLVEVTNMRKFVEEELHALRKDIDETALALLDTSTTSNIIDPEEAKRLGLRIIRRDNIELKIINVEPTRKFGWAWNVKVKIEEWKGKVDFLVAPLDDYKIVLGLDFMKQAHAYFDATRETLVFPYKEREVSLKYIEMTGKVILKSMQTRRHRKGKGSRVLRSFRYCTLGH*

Homology

[Close]

BLAST of Chy1G009570.1 vs. ExPASy TrEMBL
Match: A0A5A7UQ97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00090 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24
Identity = 55/100 (55.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 59  LLDTSTTSNIIDPEEAKRLGLRIIRRDNIELKIINVEPTRKFGWAWNVKVKIEEWKGKVD 118
           +LDT  T+N++D +EAKRLGLR  RR +IE+KII  +P R  GW W+VK ++E W+GK+D
Sbjct: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60

Query: 119 FLVAPLDDYKIVLGLDFMKQAHAYFDATRETLVFPYKERE 159
           FL+  LDDYKIV+GLDF+ +AHA  +  ++TL FP   RE
Sbjct: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRE 100

[Close]

BLAST of Chy1G009570.1 vs. ExPASy TrEMBL
Match: A0A5D3E2A4 (Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00310 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-23
Identity = 58/115 (50.43%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 53  DETALALLDTSTTSNIIDPEEAKRLGLRIIRRDNIELKIINVEPTRKFGWAWNVKVKIEE 112
           ++ ALA+LD   T N++DP+EAKRLGLRI RR + E+KIIN +P     WAW+VK++I  
Sbjct: 7   NKVALAMLDIGATKNVMDPKEAKRLGLRITRRSDTEIKIINGKPMMNIRWAWDVKIRIGG 66

Query: 113 WKGKVDFLVAPLDDYKIVLGLDFMKQAHAYFDATRETLVFPYKEREVSLKYIEMT 168
            +G++DFL+APL+D KI+LGLDF+ +A+A  +  ++TL F    REV LK +  T
Sbjct: 67  CQGELDFLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIRREVPLKRMGAT 121

[Close]

BLAST of Chy1G009570.1 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.6e-19
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 53  DETALALLDTSTTSNIIDPEEAKRLGLRIIRRDNIELKIINVEPTRKFGWAWNVKVKIEE 112
           ++ ALA+LD   T N++DPEEAKRLGLR  RR + E+KII+ +  +  GWA +VK ++  
Sbjct: 368 NKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGG 427

Query: 113 WKGKVDFLVAPLDDYKIVLGLDFMKQAHA 142
           W+GK++FL+A LDD KI+LGLDF+  AH+
Sbjct: 428 WQGKLNFLIAHLDDCKIILGLDFVDTAHS 456

[Close]

BLAST of Chy1G009570.1 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-03
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 5  QDPVEECFATLE--GKLDEVQKQDIYDLLVEVTNMRKFVEEELHALRKDIDE 55
          QD VE   A  E    L +   +++YD+LVEVTN+RKFVEEELHALRK++DE
Sbjct: 10 QDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVDE 61

HSP 2 Score: 104.8 bits (260), Expect = 4.4e-19
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 56  ALALLDTSTTSNIIDPEE--AKRLGLRIIRRDNIELKIINVEPTRKFGWAWNVKVKIEEW 115
           A+  L      +  +P+E  AKRLGL+I RR + E+KII+ +P R  G AW++K ++  W
Sbjct: 221 AIRYLSAMENDSFKEPQEGVAKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGW 280

Query: 116 KGKVDFLVAPLDDYKIVLGLDFMKQAHAYFDATRETLVFPYKERE 159
           +G++DFL+APL+DYKIV+GLDF+ +AHA  +  ++TL FP   RE
Sbjct: 281 QGELDFLIAPLNDYKIVIGLDFIDKAHATINLLKKTLDFPRIRRE 325

[Close]

BLAST of Chy1G009570.1 vs. ExPASy TrEMBL
Match: A0A5A7T3H7 (DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00570 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.0e-16
Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 98  RKFGWAWNVKVKIEEWKGKVDFLVAPLDDYKIVLGLDFMKQAHAYFDATRETLVFPYKER 157
           +  GWA +VK ++  W+GK+DFL+APLDD KIVLGLDF+  AHA  +  ++TL F +   
Sbjct: 2   KNIGWAQDVKTRVGGWQGKLDFLIAPLDDCKIVLGLDFIDTAHATINFMKKTLDFTHIRE 61

Query: 158 EVSLKYIEMTGKVILKSMQTRRHRKGKGSR 188
           E  LK +  TG+V L +M+ RR  KGKGSR
Sbjct: 62  EAPLKRMGATGEVRLSAMRVRRRHKGKGSR 91

[Close]

BLAST of Chy1G009570.1 vs. NCBI nr
Match: KAE8637433.1 (hypothetical protein CSA_004611, partial [Cucumis sativus])

HSP 1 Score: 222 bits (566), Expect = 1.64e-67
Identity = 149/365 (40.82%), Postives = 168/365 (46.03%), Query Frame = 0


Query: 2   STTQDPVEECFATLEGKLDEVQKQ-----------------------------------D 61
           STT+D VEE FATLEGKL+EVQ++                                   D
Sbjct: 38  STTRDVVEERFATLEGKLEEVQEKLGETSELMEELLVDHAEVSKITKAMIEDLRDSHGKD 97

Query: 62  IYDLLVEVTNMRKFVEEELHALRKDIDET------------------------------- 121
           I+DL+VEVTNMRKF+EEELHALRKD+DE                                
Sbjct: 98  IHDLIVEVTNMRKFMEEELHALRKDVDEVRAECLSRHNANETLTDYRPKEKRTNESGGEV 157

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 158 SETRKEHVHKARDSHRDSGRHGKATEAKKGTSFKTPSPCFLCNGPHWARDCPQKKVLSAL 217

Query: 182 ------------------------------------------------------ALALLD 186
                                                                 ALALLD
Sbjct: 218 MAKLHKREEEEVPIPEEAHLGGIQYLGAMKVVPSSKEPIGKGLLYVDATLNNQAALALLD 277

[Close]

BLAST of Chy1G009570.1 vs. NCBI nr
Match: KAE8646814.1 (hypothetical protein Csa_005402 [Cucumis sativus])

HSP 1 Score: 217 bits (553), Expect = 4.11e-66
Identity = 106/134 (79.10%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 53  DETALALLDTSTTSNIIDPEEAKRLGLRIIRRDNIELKIINVEPTRKFGWAWNVKVKIEE 112
           ++ ALALLDT  TSNIID EEAKRLGL+I RRD++ELKIIN EPTR +GWAWNVKVKI E
Sbjct: 162 NQAALALLDTGATSNIIDLEEAKRLGLKITRRDDVELKIINAEPTRNYGWAWNVKVKIGE 221

Query: 113 WKGKVDFLVAPLDDYKIVLGLDFMKQAHAYFDATRETLVFPYKEREVSLKYIEMTGKVIL 172
           WKGK+DFL+APLDD K+VLGLDFMKQAHAY DATRETLVFP K+REV LK I MTGKV++
Sbjct: 222 WKGKIDFLLAPLDDCKVVLGLDFMKQAHAYVDATRETLVFPNKKREVPLKCIGMTGKVMI 281

Query: 173 KSMQTRRHRKGKGS 186
            +MQTRRHRKGKGS
Sbjct: 282 GAMQTRRHRKGKGS 295

[Close]

BLAST of Chy1G009570.1 vs. NCBI nr
Match: TYK30022.1 (Asp_protease domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (300), Expect = 4.80e-31
Identity = 58/115 (50.43%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 53  DETALALLDTSTTSNIIDPEEAKRLGLRIIRRDNIELKIINVEPTRKFGWAWNVKVKIEE 112
           ++ ALA+LD   T N++DP+EAKRLGLRI RR + E+KIIN +P     WAW+VK++I  
Sbjct: 7   NKVALAMLDIGATKNVMDPKEAKRLGLRITRRSDTEIKIINGKPMMNIRWAWDVKIRIGG 66

Query: 113 WKGKVDFLVAPLDDYKIVLGLDFMKQAHAYFDATRETLVFPYKEREVSLKYIEMT 167
            +G++DFL+APL+D KI+LGLDF+ +A+A  +  ++TL F    REV LK +  T
Sbjct: 67  CQGELDFLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIRREVPLKRMGAT 121

[Close]

BLAST of Chy1G009570.1 vs. NCBI nr
Match: KAA0057354.1 (uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK30043.1 uncharacterized protein E5676_scaffold216G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 123 bits (309), Expect = 5.83e-31
Identity = 55/100 (55.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 59  LLDTSTTSNIIDPEEAKRLGLRIIRRDNIELKIINVEPTRKFGWAWNVKVKIEEWKGKVD 118
           +LDT  T+N++D +EAKRLGLR  RR +IE+KII  +P R  GW W+VK ++E W+GK+D
Sbjct: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60

Query: 119 FLVAPLDDYKIVLGLDFMKQAHAYFDATRETLVFPYKERE 158
           FL+  LDDYKIV+GLDF+ +AHA  +  ++TL FP   RE
Sbjct: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRE 100

[Close]

BLAST of Chy1G009570.1 vs. NCBI nr
Match: KAA0035961.1 (uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK30442.1 uncharacterized protein E5676_scaffold349G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (265), Expect = 4.70e-23
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 53  DETALALLDTSTTSNIIDPEEAKRLGLRIIRRDNIELKIINVEPTRKFGWAWNVKVKIEE 112
           ++ ALA+LD   T N++DPEEAKRLGLR  RR + E+KII+ +  +  GWA +VK ++  
Sbjct: 368 NKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGG 427

Query: 113 WKGKVDFLVAPLDDYKIVLGLDFMKQAHA 141
           W+GK++FL+A LDD KI+LGLDF+  AH+
Sbjct: 428 WQGKLNFLIAHLDDCKIILGLDFVDTAHS 456

The following BLAST results are available for this feature:

BLAST of Chy1G009570.1 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G009570.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQ97	2.0e-24	55.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E2A4	2.2e-23	50.43	Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7T2W8	2.6e-19	52.81	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T2W8	2.0e-03	57.69	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T3H7	2.0e-16	51.11	DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Chy1G009570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8637433.1	1.64e-67	40.82	hypothetical protein CSA_004611, partial [Cucumis sativus]	[more]
KAE8646814.1	4.11e-66	79.10	hypothetical protein Csa_005402 [Cucumis sativus]	[more]
TYK30022.1	4.80e-31	50.43	Asp_protease domain-containing protein [Cucumis melo var. makuwa]	[more]
KAA0057354.1	5.83e-31	55.00	uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0035961.1	4.70e-23	52.81	uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK3...	[more]

BLAST of Chy1G009570.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..58
None	No IPR available	PFAM	PF13975	gag-asp_proteas	coord: 57..138 e-value: 7.8E-7 score: 29.6
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 53..137 e-value: 1.28642E-14 score: 64.6652
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 52..164 e-value: 2.4E-17 score: 64.9
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 57..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy1G009570	Chy1G009570	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy1G009570.1.exon4	Chy1G009570.1.exon4	exon
Chy1G009570.1.exon3	Chy1G009570.1.exon3	exon
Chy1G009570.1.exon2	Chy1G009570.1.exon2	exon
Chy1G009570.1.exon1	Chy1G009570.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy1G009570.1.cds4	Chy1G009570.1.cds4	CDS
Chy1G009570.1.cds3	Chy1G009570.1.cds3	CDS
Chy1G009570.1.cds2	Chy1G009570.1.cds2	CDS
Chy1G009570.1.cds1	Chy1G009570.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy1G009570.1	Chy1G009570.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0043170	macromolecule metabolic process
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds
molecular_function	GO:0008233	peptidase activity