Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCAAACAAGCTCAACCACCGCCCGCCATCTGCCATCCGCTGCCGTCAAATCCCCACATTCTCGCCCCCTTCTTACTCCTTCACTCTACTCTCATCACTCAATTTCCATTTCTTCCACCGATTCCCTCCATTTCAACCGCAATTTCAATGAATTCCAACAAAGACCCGAGGAAGCGGCAGGCGGAATTGCCGCCTCGACGGGGTTTGATCAAGATCAAGATCTTCCGGAGCATTTTCAGGACGGTCAAATCCATACCGGAAGGATTCGCAAGAAGCCGGCGGGAAGACGAAACTCTAACTTCGACTTCCACTTCGACAACGCCGGCTCCAGGTACGAGCGGGTATAACTCGGAAGCTCAGTCCGAGTCATGA
GTTCAAACAAGCTCAACCACCGCCCGCCATCTGCCATCCGCTGCCGTCAAATCCCCACATTCTCGCCCCCTTCTTACTCCTTCACTCTACTCTCATCACTCAATTTCCATTTCTTCCACCGATTCCCTCCATTTCAACCGCAATTTCAATGAATTCCAACAAAGACCCGAGGAAGCGGCAGGCGGAATTGCCGCCTCGACGGGGTTTGATCAAGATCAAGATCTTCCGGAGCATTTTCAGGACGGTCAAATCCATACCGGAAGGATTCGCAAGAAGCCGGCGGGAAGACGAAACTCTAACTTCGACTTCCACTTCGACAACGCCGGCTCCAGGTACGAGCGGGTATAACTCGGAAGCTCAGTCCGAGTCATGA
GTTCAAACAAGCTCAACCACCGCCCGCCATCTGCCATCCGCTGCCGTCAAATCCCCACATTCTCGCCCCCTTCTTACTCCTTCACTCTACTCTCATCACTCAATTTCCATTTCTTCCACCGATTCCCTCCATTTCAACCGCAATTTCAATGAATTCCAACAAAGACCCGAGGAAGCGGCAGGCGGAATTGCCGCCTCGACGGGGTTTGATCAAGATCAAGATCTTCCGGAGCATTTTCAGGACGGTCAAATCCATACCGGAAGGATTCGCAAGAAGCCGGCGGGAAGACGAAACTCTAACTTCGACTTCCACTTCGACAACGCCGGCTCCAGGTACGAGCGGGTATAACTCGGAAGCTCAGTCCGAGTCATGA
VQTSSTTARHLPSAAVKSPHSRPLLTPSLYSHHSISISSTDSLHFNRNFNEFQQRPEEAAGGIAASTGFDQDQDLPEHFQDGQIHTGRIRKKPAGRRNSNFDFHFDNAGSRYERV*LGSSVRVMX
Homology
BLAST of Chy12G214960.1 vs. NCBI nr
Match:
KAG6583473.1 (hypothetical protein SDJN03_19405, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 89.0 bits (219), Expect = 1.91e-19
Identity = 58/101 (57.43%), Postives = 67/101 (66.34%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
KAG6583473.1 1.91e-19 57.43 hypothetical protein SDJN03_19405, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
G T T C A A A C A A G C T C A A C C A C C G C C C G C C A T C T G C C A T C C G C T G C C G T C A A A T C C C C A C A T T C T C G C C C C C T T C T T A C T C C T T C A C T C T A C T C T C A T C A C T C A A T T T C C A T T T C T T C C A C C G A T T C C C T C C A T T T C A A C C G C A A T T T C A A T G A A T T C C A A C A A A G A C C C G A G G A A G C G G C A G G C G G A A T T G C C G C C T C G A C G G G G T T T G A T C A A G A T C A A G A T C T T C C G G A G C A T T T T C A G G A C G G T C A A A T C C A T A C C G G A A G G A T T C G C A A G A A G C C G G C G G G A A G A C G A A A C T C T A A C T T C G A C T T C C A C T T C G A C A A C G C C G G C T C C A G G T A C G A G C G G G T A T A A C T C G G A A G C T C A G T C C G A G T C A T G A 50 100 150 200 250 300 350 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..24 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 56..76
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Type
Chy12G214960.1.exon1 Chy12G214960.1.exon1 exon
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Type
Chy12G214960.1.cds1 Chy12G214960.1.cds1 CDS
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Type
Chy12G214960.1 Chy12G214960.1-protein polypeptide
