Chy12G212680.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy12G212680.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	photosystem I subunit O
Location	chrH12: 9700604 .. 9701561 (-)
Sequence length	441
RNA-Seq Expression	Chy12G212680.1
Synteny	Chy12G212680.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGTAATCCACTGCTACCTCCAATCAATCCATCTCCAACTCTCTGCTACCGCTGTCATTAATTTTTTGGTCTCTATTATCGTTTTCGCAGGGTTCATCAAGCCGCCCGTGGCTGCCAGGAATCCGCTCAGCGTAGCCGGTGCATCTGGTGGAAAGTTCACCTGGTAAGAAATTTAGTGATGATCTGATTTGGAGAATGAGTGGCTGTTTGGTGTATTTTGATATTGATTTTGTTTTGGTGGAATGAAGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGATTTGGACTGATCGGGTGGATTGCCCCATCAAGCATTCCGGTGATCAGTGGGAAGAGCTTGACGGGGCTGTTTTTTGAGAGCATTGGAGCAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTAAATTGCATTTCCCCCTAACTTATTATTAAATTCTTTTTTCGAAATTAAGCTGATCAAATTAATTTACCTTTAACTTTATTCACTTTTTGTCTACTTTTTAAATTTTAATTAAGAATTTATGGTTGTTTTTAAACACTGCTCATTATCCATTAGCATTTTCTTCTATAAGTTTTGGAAACTAAACATATTCATATTGTATTCCTTCCTGCATCAAAATTATTATAAGTTTATAAAATTTTGTGAGATTTATTGGAAATATATTGGCTAAAATTGTAAAAACTTGTTAGTGGTTATTTTAATTTAAATGAATGATGTAATAAAGTTGTGCGTAATTAATTCAGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTTATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGA

mRNA sequence

ATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGGTTCATCAAGCCGCCCGTGGCTGCCAGGAATCCGCTCAGCGTAGCCGGTGCATCTGGTGGAAAGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGATTTGGACTGATCGGGTGGATTGCCCCATCAAGCATTCCGGTGATCAGTGGGAAGAGCTTGACGGGGCTGTTTTTTGAGAGCATTGGAGCAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTTATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGA

Coding sequence (CDS)

ATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGGTTCATCAAGCCGCCCGTGGCTGCCAGGAATCCGCTCAGCGTAGCCGGTGCATCTGGTGGAAAGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGATTTGGACTGATCGGGTGGATTGCCCCATCAAGCATTCCGGTGATCAGTGGGAAGAGCTTGACGGGGCTGTTTTTTGAGAGCATTGGAGCAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCTGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTTATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGA

Protein sequence

MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK*

Homology

[Close]

BLAST of Chy12G212680.1 vs. ExPASy Swiss-Prot
Match: Q949Q5 (Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-56
Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA  FAT S+V GLG +S+++         S F+KP ++A+NPL +AGASGG+ TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSITTKP-----FSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 145
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]

BLAST of Chy12G212680.1 vs. ExPASy TrEMBL
Match: A0A0A0LT61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168350 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 7.5e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of Chy12G212680.1 vs. ExPASy TrEMBL
Match: A0A1S3CJR4 (photosystem I subunit O OS=Cucumis melo OX=3656 GN=LOC103501744 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.3e-72
Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIK PVAARNPL+V  AS G+FTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 147
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of Chy12G212680.1 vs. ExPASy TrEMBL
Match: A0A6J1IDS7 (photosystem I subunit O OS=Cucurbita maxima OX=3661 GN=LOC111471677 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.9e-69
Identity = 132/147 (89.80%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA+AFAT SSV GLG++SLSSPSSRSPRLVSGFIKPPV ARNP  VA + GG+FTCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSGFIKPPVVARNPFGVARSFGGRFTCFQRD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 147
           TWHLGLFITLTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]

BLAST of Chy12G212680.1 vs. ExPASy TrEMBL
Match: A0A6J1CLD0 (photosystem I subunit O OS=Momordica charantia OX=3673 GN=LOC111012668 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MATAFATSS-VAGLG-TASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFER 60
           MATAFATSS + GLG ++SLSSPSSRSPRL S F+K P AARNPLSVA ASGG+FTCFER
Sbjct: 1   MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPAAARNPLSVARASGGRFTCFER 60

Query: 61  DWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120
           DWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWL
Sbjct: 61  DWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120

Query: 121 ITWHLGLFITLTFGQIGFKGRTEDYFSK 147
           +TWHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 VTWHLGLFITLTFGQIGFKGRTEDYFSK 148

[Close]

BLAST of Chy12G212680.1 vs. ExPASy TrEMBL
Match: A0A6J1EID2 (photosystem I subunit O OS=Cucurbita moschata OX=3662 GN=LOC111434359 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.0e-66
Identity = 127/147 (86.39%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA+AFAT SSV GLG++SLSSPSSRSPRLVS F+KPPV ARNP  V  + GG+ TCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 147
           TWHLGLFITLTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]

BLAST of Chy12G212680.1 vs. NCBI nr
Match: XP_004139499.1 (photosystem I subunit O [Cucumis sativus] >KGN64958.1 hypothetical protein Csa_022779 [Cucumis sativus])

HSP 1 Score: 294 bits (753), Expect = 1.93e-100
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of Chy12G212680.1 vs. NCBI nr
Match: XP_008463649.1 (PREDICTED: photosystem I subunit O [Cucumis melo])

HSP 1 Score: 278 bits (712), Expect = 3.46e-94
Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDW 60
           MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIK PVAARNPL+V  AS G+FTCFERDW
Sbjct: 1   MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDW 60

Query: 61  LRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLIT 120
           LRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLIT
Sbjct: 61  LRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLIT 120

Query: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146
           WHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 WHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]

BLAST of Chy12G212680.1 vs. NCBI nr
Match: XP_038895620.1 (photosystem I subunit O [Benincasa hispida])

HSP 1 Score: 274 bits (701), Expect = 1.70e-92
Identity = 137/147 (93.20%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MATAFATSS-VAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MATAFATSS V GLGTASLSSPSSRSPRLVSGF+K PV ARNP +VA ASGG+FTCFERD
Sbjct: 1   MATAFATSSSVVGLGTASLSSPSSRSPRLVSGFVKLPVTARNPFAVARASGGRFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146
           TWHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 147

[Close]

BLAST of Chy12G212680.1 vs. NCBI nr
Match: XP_022973174.1 (photosystem I subunit O [Cucurbita maxima])

HSP 1 Score: 267 bits (683), Expect = 9.46e-90
Identity = 132/147 (89.80%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MATAFATSS-VAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA+AFATSS V GLG++SLSSPSSRSPRLVSGFIKPPV ARNP  VA + GG+FTCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSGFIKPPVVARNPFGVARSFGGRFTCFQRD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146
           TWHLGLFITLTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]

BLAST of Chy12G212680.1 vs. NCBI nr
Match: XP_022142590.1 (photosystem I subunit O [Momordica charantia])

HSP 1 Score: 264 bits (674), Expect = 2.31e-88
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MATAFATSS-VAGLG-TASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFER 60
           MATAFATSS + GLG ++SLSSPSSRSPRL S F+K P AARNPLSVA ASGG+FTCFER
Sbjct: 1   MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPAAARNPLSVARASGGRFTCFER 60

Query: 61  DWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120
           DWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWL
Sbjct: 61  DWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120

Query: 121 ITWHLGLFITLTFGQIGFKGRTEDYFSK 146
           +TWHLGLFITLTFGQIGFKGRTEDYFSK
Sbjct: 121 VTWHLGLFITLTFGQIGFKGRTEDYFSK 148

[Close]

BLAST of Chy12G212680.1 vs. TAIR 10
Match: AT1G08380.1 (photosystem I subunit O )

HSP 1 Score: 220.7 bits (561), Expect = 7.7e-58
Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60
           MA  FAT S+V GLG +S+++         S F+KP ++A+NPL +AGASGG+ TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSITTKP-----FSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFITLTFGQIGFKGRTEDYF 145
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

The following BLAST results are available for this feature:

BLAST of Chy12G212680.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949Q5	1.1e-56	72.41	Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1	[more]

BLAST of Chy12G212680.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT61	7.5e-77	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168350 PE=4 SV=1	[more]
A0A1S3CJR4	4.3e-72	94.52	photosystem I subunit O OS=Cucumis melo OX=3656 GN=LOC103501744 PE=4 SV=1	[more]
A0A6J1IDS7	9.9e-69	89.80	photosystem I subunit O OS=Cucurbita maxima OX=3661 GN=LOC111471677 PE=4 SV=1	[more]
A0A6J1CLD0	1.1e-67	89.19	photosystem I subunit O OS=Momordica charantia OX=3673 GN=LOC111012668 PE=4 SV=1	[more]
A0A6J1EID2	6.0e-66	86.39	photosystem I subunit O OS=Cucurbita moschata OX=3662 GN=LOC111434359 PE=4 SV=1	[more]

BLAST of Chy12G212680.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139499.1	1.93e-100	100.00	photosystem I subunit O [Cucumis sativus] >KGN64958.1 hypothetical protein Csa_0...	[more]
XP_008463649.1	3.46e-94	94.52	PREDICTED: photosystem I subunit O [Cucumis melo]	[more]
XP_038895620.1	1.70e-92	93.20	photosystem I subunit O [Benincasa hispida]	[more]
XP_022973174.1	9.46e-90	89.80	photosystem I subunit O [Cucurbita maxima]	[more]
XP_022142590.1	2.31e-88	89.19	photosystem I subunit O [Momordica charantia]	[more]

BLAST of Chy12G212680.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08380.1	7.7e-58	72.41	photosystem I subunit O	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017498	Photosystem I PsaO	TIGRFAM	TIGR03059	TIGR03059	coord: 66..144 e-value: 6.9E-39 score: 130.2
IPR017498	Photosystem I PsaO	PANTHER	PTHR36311	PHOTOSYSTEM I SUBUNIT O	coord: 1..146
None	No IPR available	PANTHER	PTHR36311:SF2	BNAC08G43200D PROTEIN	coord: 1..146

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy12G212680	Chy12G212680	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy12G212680.1.exon4	Chy12G212680.1.exon4	exon
Chy12G212680.1.exon3	Chy12G212680.1.exon3	exon
Chy12G212680.1.exon2	Chy12G212680.1.exon2	exon
Chy12G212680.1.exon1	Chy12G212680.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy12G212680.1.cds4	Chy12G212680.1.cds4	CDS
Chy12G212680.1.cds3	Chy12G212680.1.cds3	CDS
Chy12G212680.1.cds2	Chy12G212680.1.cds2	CDS
Chy12G212680.1.cds1	Chy12G212680.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy12G212680.1	Chy12G212680.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
molecular_function	GO:0003729	mRNA binding