CcUC11G216540.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC11G216540.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	disease resistance protein (TIR-NBS class), putative
Location	CicolChr11: 9967524 .. 9967937 (+)
Sequence length	414
RNA-Seq Expression	CcUC11G216540.1
Synteny	CcUC11G216540.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAATCTTTATCATCATCGTCGTTTCAACCCATTTCTACTCCGATCAATAATATTGCAGCTCAATATGATTTGTTCGTGAGTTTTCGAGGCGAAGATGTAAGAAATAATTTTGTTAGTCATCTTCAGGCAGCATTCAAACGCAAAGGAACCGCAACTTTTTTCGACGAAGAGCTCAAGAGAGGACAGCAAATTGCTCCCGCTCTTCTTAAAGCTATACACAAACAATCTTCCATTTCCGTCGTCGTTTTCTCTGAGAACTATGCATTTTCTAGATGGTGTTTGGATGAACTTTCGAAGATTCTTGAATGTAGAAACATCTATGGCCAGGTCGTCCTTCCGCTTTTCTACGGCGTAGATCCATCAAATGTCCGAAAGAAAACAGGGAGTTATGCAGAAGCCATTCTCTAA

mRNA sequence

ATGGCTGAATCTTTATCATCATCGTCGTTTCAACCCATTTCTACTCCGATCAATAATATTGCAGCTCAATATGATTTGTTCGTGAGTTTTCGAGGCGAAGATGTAAGAAATAATTTTGTTAGTCATCTTCAGGCAGCATTCAAACGCAAAGGAACCGCAACTTTTTTCGACGAAGAGCTCAAGAGAGGACAGCAAATTGCTCCCGCTCTTCTTAAAGCTATACACAAACAATCTTCCATTTCCGTCGTCGTTTTCTCTGAGAACTATGCATTTTCTAGATGGTGTTTGGATGAACTTTCGAAGATTCTTGAATGTAGAAACATCTATGGCCAGGTCGTCCTTCCGCTTTTCTACGGCGTAGATCCATCAAATGTCCGAAAGAAAACAGGGAGTTATGCAGAAGCCATTCTCTAA

Coding sequence (CDS)

ATGGCTGAATCTTTATCATCATCGTCGTTTCAACCCATTTCTACTCCGATCAATAATATTGCAGCTCAATATGATTTGTTCGTGAGTTTTCGAGGCGAAGATGTAAGAAATAATTTTGTTAGTCATCTTCAGGCAGCATTCAAACGCAAAGGAACCGCAACTTTTTTCGACGAAGAGCTCAAGAGAGGACAGCAAATTGCTCCCGCTCTTCTTAAAGCTATACACAAACAATCTTCCATTTCCGTCGTCGTTTTCTCTGAGAACTATGCATTTTCTAGATGGTGTTTGGATGAACTTTCGAAGATTCTTGAATGTAGAAACATCTATGGCCAGGTCGTCCTTCCGCTTTTCTACGGCGTAGATCCATCAAATGTCCGAAAGAAAACAGGGAGTTATGCAGAAGCCATTCTCTAA

Protein sequence

MAESLSSSSFQPISTPINNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKKTGSYAEAIL

Homology

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BLAST of CcUC11G216540.1 vs. NCBI nr
Match: XP_038876489.1 (disease resistance protein RLM3-like [Benincasa hispida] >XP_038876490.1 disease resistance protein RLM3-like [Benincasa hispida])

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54
Identity = 114/135 (84.44%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 1   MAESLSSSSFQPISTPINNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEEL 60
           MAE  SSSSFQPIS+P NNIA QYD+FVSFRGEDVRNNFVSHLQAAFKRKG  TFFDEEL
Sbjct: 1   MAEP-SSSSFQPISSPANNIAVQYDVFVSFRGEDVRNNFVSHLQAAFKRKGITTFFDEEL 60

Query: 61  KRGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGV 120
           KRGQQI+PALLKAI +QSSISVVVFSENYA SRWCLDEL KI+ECRN YGQ+VLP+FY V
Sbjct: 61  KRGQQISPALLKAI-QQSSISVVVFSENYASSRWCLDELLKIVECRNTYGQIVLPVFYHV 120

Query: 121 DPSNVRKKTGSYAEA 136
           DPSNVR +TG YAEA
Sbjct: 121 DPSNVRNQTGIYAEA 133

[Close]

BLAST of CcUC11G216540.1 vs. NCBI nr
Match: RVW15031.1 (TMV resistance protein N [Vitis vinifera])

HSP 1 Score: 157.5 bits (397), Expect = 8.1e-35
Identity = 76/139 (54.68%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 2   AESLSSSSFQPISTPINNIAA-----QYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFF 61
           + S SSSS  P S+P ++ ++     +YD+F+SFRGED R +F  HL  A ++KG  TF 
Sbjct: 4   SSSSSSSSSSPFSSPFSSPSSSTHQWEYDVFLSFRGEDTRKSFTDHLHMALRQKGVNTFM 63

Query: 62  DEELKRGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPL 121
           D++L+RG+QI+PALLKAI ++S  S++VFSENYA S WCLDEL+KI++  N+ G V LP+
Sbjct: 64  DDQLRRGEQISPALLKAI-EESRFSIIVFSENYASSSWCLDELAKIVDSVNVMGHVALPV 123

Query: 122 FYGVDPSNVRKKTGSYAEA 136
           FY VDPS+VRK++GS+AEA
Sbjct: 124 FYNVDPSHVRKQSGSFAEA 141

[Close]

BLAST of CcUC11G216540.1 vs. NCBI nr
Match: QCD79341.1 (maintenance of ploidy protein MOB1 [Vigna unguiculata])

HSP 1 Score: 156.0 bits (393), Expect = 2.3e-34
Identity = 69/120 (57.50%), Postives = 95/120 (79.17%), Query Frame = 0


Query: 18  NNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAPALLKAIHKQ 77
           +N + +YD+F+SFRGED R NF SHL    K+K   T+ D  L++G +I+PAL+KAI + 
Sbjct: 9   SNSSKKYDVFLSFRGEDTRMNFTSHLHEVLKQKKVETYIDYRLEKGDEISPALIKAI-ED 68

Query: 78  SSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKKTGSYAEAIL 137
           S +S+V+ SENYAFS+WCL+ELSKILECR I GQ+V+P+FY +DPS+VRK+TGSY +A +
Sbjct: 69  SHVSIVIISENYAFSKWCLEELSKILECRKIQGQIVIPVFYNIDPSHVRKQTGSYEQAFV 127

[Close]

BLAST of CcUC11G216540.1 vs. NCBI nr
Match: XP_027933268.1 (TMV resistance protein N-like isoform X1 [Vigna unguiculata] >XP_027933269.1 TMV resistance protein N-like isoform X1 [Vigna unguiculata])

HSP 1 Score: 156.0 bits (393), Expect = 2.3e-34
Identity = 69/120 (57.50%), Postives = 95/120 (79.17%), Query Frame = 0


Query: 18  NNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAPALLKAIHKQ 77
           +N + +YD+F+SFRGED R NF SHL    K+K   T+ D  L++G +I+PAL+KAI + 
Sbjct: 9   SNSSKKYDVFLSFRGEDTRMNFTSHLHEVLKQKKVETYIDYRLEKGDEISPALIKAI-ED 68

Query: 78  SSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKKTGSYAEAIL 137
           S +S+V+ SENYAFS+WCL+ELSKILECR I GQ+V+P+FY +DPS+VRK+TGSY +A +
Sbjct: 69  SHVSIVIISENYAFSKWCLEELSKILECRKIQGQIVIPVFYNIDPSHVRKQTGSYEQAFV 127

[Close]

BLAST of CcUC11G216540.1 vs. NCBI nr
Match: XP_027933270.1 (TMV resistance protein N-like isoform X2 [Vigna unguiculata])

HSP 1 Score: 156.0 bits (393), Expect = 2.3e-34
Identity = 69/120 (57.50%), Postives = 95/120 (79.17%), Query Frame = 0


Query: 18  NNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAPALLKAIHKQ 77
           +N + +YD+F+SFRGED R NF SHL    K+K   T+ D  L++G +I+PAL+KAI + 
Sbjct: 9   SNSSKKYDVFLSFRGEDTRMNFTSHLHEVLKQKKVETYIDYRLEKGDEISPALIKAI-ED 68

Query: 78  SSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKKTGSYAEAIL 137
           S +S+V+ SENYAFS+WCL+ELSKILECR I GQ+V+P+FY +DPS+VRK+TGSY +A +
Sbjct: 69  SHVSIVIISENYAFSKWCLEELSKILECRKIQGQIVIPVFYNIDPSHVRKQTGSYEQAFV 127

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-34
Identity = 75/135 (55.56%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 1   MAESLSSSSFQPISTPINNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEEL 60
           MA + S  +    STP       YD+F+SFRGED R NF  HL +A  R+G  TF D+ L
Sbjct: 1   MASTSSFRASSSSSTPSIPRTTTYDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDRL 60

Query: 61  KRGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGV 120
           +RG+ IAP LLKAI ++S  SV+VFSENYA SRWCLDEL KI+EC+   G  V P+FY V
Sbjct: 61  RRGEAIAPELLKAI-EESRSSVIVFSENYAHSRWCLDELVKIMECQKDLGHAVFPIFYHV 120

Query: 121 DPSNVRKKTGSYAEA 136
           DPS+VRK+ GS+ EA
Sbjct: 121 DPSHVRKQEGSFGEA 134

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.5e-33
Identity = 76/137 (55.47%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 2   AESLSSSSFQPISTPINNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELK 61
           + S +SSS    STP       YD+F+SFRGED R NF  HL +A  R+G  TF D++L+
Sbjct: 5   SSSRASSSSSSSSTPSIPRTITYDVFLSFRGEDTRFNFTDHLYSALGRRGIRTFRDDKLR 64

Query: 62  RGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILEC---RNIYGQVVLPLFY 121
           RG+ IAP LLKAI ++S  SV+VFSENYA SRWCLDEL KI+EC   +   G  V P+FY
Sbjct: 65  RGEAIAPELLKAI-EESRSSVIVFSENYARSRWCLDELVKIMECHKDKKDPGHAVFPIFY 124

Query: 122 GVDPSNVRKKTGSYAEA 136
            VDPS+VRK+ GS+ EA
Sbjct: 125 HVDPSHVRKQEGSFGEA 140

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy Swiss-Prot
Match: F4JWM0 (Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.8e-30
Identity = 66/134 (49.25%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 2   AESLSSSSFQPISTPINNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELK 61
           + S S SS   +S+PI+     + +F SFRGEDVR  F+SH+Q  FK KG   F D+E+K
Sbjct: 40  SSSSSLSSPPSLSSPISR-TWTHQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMK 99

Query: 62  RGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVD 121
           RG+ I P L +AI ++S I++V+ S+NYA S WCL+EL +I+ CR   GQ V+ +FY VD
Sbjct: 100 RGESIGPGLFQAI-RESKIAIVLLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVD 159

Query: 122 PSNVRKKTGSYAEA 136
           PS+VRK+TG + +A
Sbjct: 160 PSDVRKQTGDFGKA 171

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy Swiss-Prot
Match: O82500 (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.2e-30
Identity = 63/115 (54.78%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 23  QYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAPALLKAIHKQSSISV 82
           +YD+F SFRGEDVRNNF+SHL   F+ KG  TF D+ +KR   I   L  AI ++S ISV
Sbjct: 10  RYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAI-RESKISV 69

Query: 83  VVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKKTGSYAEAIL 138
           V+FSENYA S WCLDEL +I++C+   G  V+P+FY VDPS++RK+TG +  + L
Sbjct: 70  VLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFL 123

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy Swiss-Prot
Match: F4J339 (Probable disease resistance protein RPP1 OS=Arabidopsis thaliana OX=3702 GN=RPP1 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.6e-28
Identity = 57/132 (43.18%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 6   SSSSFQPISTPINNIAA--QYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRG 65
           S+SS   + +P  +++   ++D+F SF G DVR  F+SH+  +F+RKG  TF D  ++R 
Sbjct: 78  SNSSSLSLPSPATSVSRNWKHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERS 137

Query: 66  QQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPS 125
           + I P L +AI K S I++V+ S  YA S WCLDEL++I++CR + GQ+V+ +FY VDP+
Sbjct: 138 KSIGPELKEAI-KGSKIAIVLLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPT 197

Query: 126 NVRKKTGSYAEA 136
           +++K+TG + +A
Sbjct: 198 DIKKQTGEFGKA 208

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy TrEMBL
Match: A0A438BVL8 (TMV resistance protein N OS=Vitis vinifera OX=29760 GN=N_6 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.9e-35
Identity = 76/139 (54.68%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 2   AESLSSSSFQPISTPINNIAA-----QYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFF 61
           + S SSSS  P S+P ++ ++     +YD+F+SFRGED R +F  HL  A ++KG  TF 
Sbjct: 4   SSSSSSSSSSPFSSPFSSPSSSTHQWEYDVFLSFRGEDTRKSFTDHLHMALRQKGVNTFM 63

Query: 62  DEELKRGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPL 121
           D++L+RG+QI+PALLKAI ++S  S++VFSENYA S WCLDEL+KI++  N+ G V LP+
Sbjct: 64  DDQLRRGEQISPALLKAI-EESRFSIIVFSENYASSSWCLDELAKIVDSVNVMGHVALPV 123

Query: 122 FYGVDPSNVRKKTGSYAEA 136
           FY VDPS+VRK++GS+AEA
Sbjct: 124 FYNVDPSHVRKQSGSFAEA 141

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy TrEMBL
Match: A0A4D6KXQ6 (Maintenance of ploidy protein MOB1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g2980 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34
Identity = 69/120 (57.50%), Postives = 95/120 (79.17%), Query Frame = 0


Query: 18  NNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAPALLKAIHKQ 77
           +N + +YD+F+SFRGED R NF SHL    K+K   T+ D  L++G +I+PAL+KAI + 
Sbjct: 9   SNSSKKYDVFLSFRGEDTRMNFTSHLHEVLKQKKVETYIDYRLEKGDEISPALIKAI-ED 68

Query: 78  SSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKKTGSYAEAIL 137
           S +S+V+ SENYAFS+WCL+ELSKILECR I GQ+V+P+FY +DPS+VRK+TGSY +A +
Sbjct: 69  SHVSIVIISENYAFSKWCLEELSKILECRKIQGQIVIPVFYNIDPSHVRKQTGSYEQAFV 127

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy TrEMBL
Match: F6HJI7 (TIR domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s0184g00120 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.3e-34
Identity = 74/118 (62.71%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 18  NNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAPALLKAIHKQ 77
           +N+   YD+F+SFRGED RNNF  HL     RKG   F D++LKRG++IAP LL AI K 
Sbjct: 8   SNLGWTYDVFLSFRGEDTRNNFTDHLYTDLVRKGIRIFRDDKLKRGEKIAPELLNAIEKS 67

Query: 78  SSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKKTGSYAEA 136
            S S+VVFS++YA SRWCLDEL+KI+ECR  YGQ VLP+FY VDPS+VRK+TGS+ EA
Sbjct: 68  RS-SIVVFSKSYADSRWCLDELAKIMECRREYGQKVLPIFYHVDPSDVRKQTGSFGEA 124

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy TrEMBL
Match: V4T5C4 (TIR domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10023975mg PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.3e-34
Identity = 76/120 (63.33%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 20  IAAQ--YDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAPALLKAIHKQ 79
           +AAQ  YD+FVSFRGED R+NF SHL AA  RK   TF DE+L RG +I+PALL AI ++
Sbjct: 8   LAAQCKYDVFVSFRGEDTRDNFTSHLVAALCRKKIKTFIDEQLDRGDEISPALLDAI-ER 67

Query: 80  SSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKKTGSYAEAIL 138
           S ISV++FSENYA S+WCLDEL KILEC+N   Q+V+P+FY VDPS+VRK+TGS+ +A +
Sbjct: 68  SKISVIIFSENYASSKWCLDELVKILECKNKNAQMVVPVFYHVDPSDVRKQTGSFGDAFV 126

[Close]

BLAST of CcUC11G216540.1 vs. ExPASy TrEMBL
Match: A0A2H5NXG4 (TIR domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_084690 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.3e-34
Identity = 76/129 (58.91%), Postives = 97/129 (75.19%), Query Frame = 0


Query: 9   SFQPISTPINNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAP 68
           SF   S+       +YD+FVSFRGED R+NF SHL AA  RK   TF DE+L RG +I+P
Sbjct: 51  SFMAASSSCLAAQCKYDVFVSFRGEDTRDNFTSHLVAALCRKKIKTFIDEQLVRGDEISP 110

Query: 69  ALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKK 128
           ALL AI ++S ISV++FSENYA S+WCLDEL KILEC+N   Q+V+P+FY VDPS+VRK+
Sbjct: 111 ALLDAI-ERSKISVIIFSENYASSKWCLDELVKILECKNKNAQMVVPVFYHVDPSDVRKQ 170

Query: 129 TGSYAEAIL 138
           TGS+ +A +
Sbjct: 171 TGSFGDAFV 178

[Close]

BLAST of CcUC11G216540.1 vs. TAIR 10
Match: AT5G18370.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-31
Identity = 66/134 (49.25%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 2   AESLSSSSFQPISTPINNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELK 61
           + S S SS   +S+PI+     + +F SFRGEDVR  F+SH+Q  FK KG   F D+E+K
Sbjct: 40  SSSSSLSSPPSLSSPISR-TWTHQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMK 99

Query: 62  RGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVD 121
           RG+ I P L +AI ++S I++V+ S+NYA S WCL+EL +I+ CR   GQ V+ +FY VD
Sbjct: 100 RGESIGPGLFQAI-RESKIAIVLLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVD 159

Query: 122 PSNVRKKTGSYAEA 136
           PS+VRK+TG + +A
Sbjct: 160 PSDVRKQTGDFGKA 171

[Close]

BLAST of CcUC11G216540.1 vs. TAIR 10
Match: AT4G11170.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 131.7 bits (330), Expect = 4.4e-31
Identity = 63/115 (54.78%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 23  QYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEELKRGQQIAPALLKAIHKQSSISV 82
           +YD+F SFRGEDVRNNF+SHL   F+ KG  TF D+ +KR   I   L  AI ++S ISV
Sbjct: 10  RYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAI-RESKISV 69

Query: 83  VVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYGVDPSNVRKKTGSYAEAIL 138
           V+FSENYA S WCLDEL +I++C+   G  V+P+FY VDPS++RK+TG +  + L
Sbjct: 70  VLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFL 123

[Close]

BLAST of CcUC11G216540.1 vs. TAIR 10
Match: AT3G04220.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 131.3 bits (329), Expect = 5.8e-31
Identity = 65/135 (48.15%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 3   ESLSSSSFQPI-STPINNIA--AQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEE 62
           E+ SSSS QP  S P+++++   +YD+F SFRGEDVR +F+SH+Q  F+R+G   F D  
Sbjct: 39  ENDSSSSTQPSPSPPLSSLSLTRKYDVFPSFRGEDVRKDFLSHIQKEFQRQGITPFVDNN 98

Query: 63  LKRGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYG 122
           +KRG+ I P L++AI + S I++++ S+NYA S WCLDEL +I++C+   GQ V+ +FY 
Sbjct: 99  IKRGESIGPELIRAI-RGSKIAIILLSKNYASSSWCLDELVEIIKCKEEMGQTVIVIFYK 158

Query: 123 VDPSNVRKKTGSYAE 135
           VDPS V+K TG + +
Sbjct: 159 VDPSLVKKLTGDFGK 172

[Close]

BLAST of CcUC11G216540.1 vs. TAIR 10
Match: AT5G11250.1 (Disease resistance protein (TIR-NBS-LRR class) )

HSP 1 Score: 129.4 bits (324), Expect = 2.2e-30
Identity = 63/136 (46.32%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 1   MAESLSSSSFQPIST--PINNIAAQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDE 60
           ++ S S SS  P S   P ++    + +F SF GEDVR +F+SH+Q  F+R G   F D 
Sbjct: 37  LSPSSSPSSLSPSSVPPPSSSCIWTHQVFPSFSGEDVRRDFLSHIQMEFQRMGITPFVDN 96

Query: 61  ELKRGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFY 120
           E+KRG+ I P LL+AI + S I++++ S NYA S+WCLDEL +I++CR  YGQ V+ +FY
Sbjct: 97  EIKRGESIGPELLRAI-RGSKIAIILLSRNYASSKWCLDELVEIMKCREEYGQTVMAIFY 156

Query: 121 GVDPSNVRKKTGSYAE 135
            VDPS+V+  TG + +
Sbjct: 157 KVDPSDVKNLTGDFGK 171

[Close]

BLAST of CcUC11G216540.1 vs. TAIR 10
Match: AT1G69550.1 (disease resistance protein (TIR-NBS-LRR class) )

HSP 1 Score: 128.3 bits (321), Expect = 4.9e-30
Identity = 62/133 (46.62%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 4   SLSSSSFQPIS--TPINNIA--AQYDLFVSFRGEDVRNNFVSHLQAAFKRKGTATFFDEE 63
           +LSSS+  P S  +P ++++    + +F SFRG+DVR NF+SH+Q  F+RKG   F D E
Sbjct: 56  TLSSSTSHPSSSTSPPSSLSCTGTHHVFPSFRGDDVRRNFLSHIQKEFRRKGITPFIDNE 115

Query: 64  LKRGQQIAPALLKAIHKQSSISVVVFSENYAFSRWCLDELSKILECRNIYGQVVLPLFYG 123
           ++RG+ I P L+KAI ++S I++V+ S NYA S+WCL+EL +I++C+  +G  V  +FY 
Sbjct: 116 IRRGESIGPELIKAI-RESKIAIVLLSRNYASSKWCLEELVEIMKCKKEFGLTVFAIFYE 175

Query: 124 VDPSNVRKKTGSY 133
           VDPS+V+K TG +
Sbjct: 176 VDPSHVKKLTGEF 187

The following BLAST results are available for this feature:

BLAST of CcUC11G216540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876489.1	1.6e-54	84.44	disease resistance protein RLM3-like [Benincasa hispida] >XP_038876490.1 disease...	[more]
RVW15031.1	8.1e-35	54.68	TMV resistance protein N [Vitis vinifera]	[more]
QCD79341.1	2.3e-34	57.50	maintenance of ploidy protein MOB1 [Vigna unguiculata]	[more]
XP_027933268.1	2.3e-34	57.50	TMV resistance protein N-like isoform X1 [Vigna unguiculata] >XP_027933269.1 TMV...	[more]
XP_027933270.1	2.3e-34	57.50	TMV resistance protein N-like isoform X2 [Vigna unguiculata]	[more]

BLAST of CcUC11G216540.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
V9M2S5	1.4e-34	55.56	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
V9M398	3.5e-33	55.47	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
F4JWM0	2.8e-30	49.25	Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=...	[more]
O82500	6.2e-30	54.78	Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN...	[more]
F4J339	7.6e-28	43.18	Probable disease resistance protein RPP1 OS=Arabidopsis thaliana OX=3702 GN=RPP1...	[more]

BLAST of CcUC11G216540.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438BVL8	3.9e-35	54.68	TMV resistance protein N OS=Vitis vinifera OX=29760 GN=N_6 PE=4 SV=1	[more]
A0A4D6KXQ6	1.1e-34	57.50	Maintenance of ploidy protein MOB1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g298...	[more]
F6HJI7	4.3e-34	62.71	TIR domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s0184g00120 PE...	[more]
V4T5C4	4.3e-34	63.33	TIR domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_...	[more]
A0A2H5NXG4	4.3e-34	58.91	TIR domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_084690 PE=4 SV=1	[more]

BLAST of CcUC11G216540.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18370.1	2.0e-31	49.25	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G11170.1	4.4e-31	54.78	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT3G04220.1	5.8e-31	48.15	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G11250.1	2.2e-30	46.32	Disease resistance protein (TIR-NBS-LRR class)	[more]
AT1G69550.1	4.9e-30	46.62	disease resistance protein (TIR-NBS-LRR class)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 23..137 e-value: 3.5E-19 score: 79.7
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 23..135 e-value: 2.5E-36 score: 125.1
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 22..137 score: 32.744179
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 21..137 e-value: 1.6E-48 score: 166.4
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 22..134
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 18..136
None	No IPR available	PANTHER	PTHR32009:SF84	TOLL/INTERLEUKIN-LIKE RECEPTOR-PROTEIN	coord: 18..136

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC11G216540	CcUC11G216540	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC11G216540.1-exon	CcUC11G216540.1-exon-CicolChr11:9967524..9967937	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC11G216540.1-cds	CcUC11G216540.1-cds-CicolChr11:9967524..9967937	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC11G216540.1	CcUC11G216540.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
biological_process	GO:0006952	defense response
molecular_function	GO:0003953	NAD+ nucleosidase activity
molecular_function	GO:0043531	ADP binding