CcUC11G210780.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC11G210780.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Peroxiredoxins prx-1 prx-2 prx-3
Location	CicolChr11: 2684687 .. 2690474 (+)
Sequence length	1287
RNA-Seq Expression	CcUC11G210780.1
Synteny	CcUC11G210780.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAGATTTTGACAATGGCTATTGGATACGGAATTTCCCTTTTCTCTCCGCTCATTGTTAGAGCTTAAAACCTCAGTGTTACAGGATTCGAACCAGGCTCAAGACTCAGGTTTGACACCCATTTCATGGCGGCCGAGGAAGGAAAGCTCATTCGGACTCGTCGAAACCAGCTCGACTTCCCATCCCGCAACTGTACGTTCATTCTCTTATTCGGTTATCTTACTTTCTTTGGTTTTATCGTCGATTTTGGAGCTCAAATTTGAATGAAGTATGTAAAATTCGTTACTCTGCACGACTTAGATTTATTATTCGATCTGATTCTGTTATCTTAGAGTTTTGAATCGTTATTACTTCTGATACACCTCCTTGTAAGCAGGGATCGATGGAAATTTTACTAGAAAAATAAGTCATGGCATTGTGGGGTTAACAATAGCACATCTTCGTTGAAACACAACACATAAAACTTTAATTTAATTGAATCCAACTCAACTTAAAACATCAACGTTGGTTTGATTTGGTTTTTGAAATTATGTTTGTTTTCTTGACAATTTATTTACTATAGTGTTCATCATTTCTTAGTTTTTAGCCCAATTCTAAATTCCAAAAACAAAACAAACTTAGCTTGGATTTTGAAAATATTCTAATAAGTGGAAGCAGTGTTAACTTTCAAAATCCTATAATCAACATGGCTTGAATTTTTTGGGTCATCACGTTCTTTAAACACTCCTAGCTCATCATGCACTGTGGTGTTAAATGGATGAAGTATTGTCATCAACACCACACTTTTGGATGGTTTTTAGCTTATGATAGTTTTACTTATAAACCAGAATTATGGAAATTTTCTGGGGAAATCAACATCGACATTGTTTTACAGAGAAGGATGCCTTTTTTTCTGATTACAAAGTCGAGAATGCTTCAAGATATCTCAATTGCTCTTTTGTTCTTATTTCTTTCCATTTCGCATGTTTTCCCGATAATATATTTAGTAGAATGAATGTACTCAATTTTGTTGCCTTAAGTTTTTGGTAGGTCAGTAGGTGCCGTGATATAATTTATCGTATGCCCAATCAATATATTAAGATCCCATGTACCATGTTTAACTTGGCTTTGTCATCAAGTCAGAGTCTTAGCTCACAGAAGGAGACAGAAGAGGCTCATAAAAGATTAAATGCACTGAAACCCATTAAGTCAAGGTTTTTGTTATAGTGGCAATTTAACATGCCCGAGCAAGCAAATTAATTTTGATTCTTGCTTTATTTAAGTCATTGTTTGGTAATAGTTTGAAGATGTTGGAATCTGGGTCATGTATGTACCCGGTGGCAATTTCTCGAAATATTCAATTGCGTATATTCCTTGAAAAGTCTAGTCGTCTTAGACGTTTTAGGCATTTGGCACATGCTTGGAGGTAGGGGTGGCAAAAACCGAAAAAAACCAACGAACTGAACCGAATCGGACTGGTCCAGTTTTTTTAAGAATAGAGAACCAACGGTTTACGGGAGAGCAAAACCGAATGGTTCGGTTTGGTTATCGGTTCATTATCCTACAAAATTGCAGAAAACCGAACCGAACCGTAGTAAAAAAAAATCACGTTGGTTCGGTTCAAGAACTAAAACCGATATGAATCGGTTTTCAATGGTTCTTCTTCATTGTAAACTGATAAGGTTCATGGTTTGGCCCAAAATAGGATCGAACCGAATCGTGCACACCCCTAAGGAATTATAGGAAGTAGCTTTCTTATTGCAGCCAACCCCTTGGCAATGCACGGTCTAAAAAATTCTCTTGGTTCCAATCATGGGGGATTCGGCCATCTGACTTCTAAGGATGTGAGTGATGTCCTGACCAATTGAAGCTATGCTCATGTTGGCATTCCTCTAGGTTTTAATCATGGCATTTTTCCTATTTTATTTTTTGGTCTGTTTTTTTGCTATGTTGGCAAGAGCATCACTCCTAGCATGCATTCTGCTCAAGGAATATCCCTACCAATTCTTGGAGGCTTCCAAAACCAACTTTAGGAGATATCAAGTTCTTAAAGTTTGAACACGGAAAGCTTCGTCCTACGAGGCTAGGACCTTGGAAATATTTTCTAACATTTCAAATCCTTATCATTATAATCCTGGCCCGATATAATTATATTTCAAACCCTTATCATTATAATTATGGCCTGATATAATTATATAAGTTATTTTTTTCTAGATATACTATTCTATAGGAGATCAGCAAACTCTTTTTTCAAAAAAAAAAAAAAAATAGAGATCATCAAGAGGAAGAAAAAGAAAAACCAAGAGGTTGAGTGGAGGGAACTTCAGTTTGGTCCCTTGTTAAACCTCACAAATTATCCCTAAATTGTGTTCTACCCACTTGTTAAACCTACCCACTTGTTAAACCTACATATTTTCTTTTATTTTTTACGCAGCTCTAAACTCTGATTTAATAAACTAATACATATACCTTAATAGGAAGCGATCACATCAGAAAGAAGTTATCAATATCTTAACAGCTAGGATGGTTTGTGATTTATCTAAACGACAAGGACCATGTTGAAAATTTAAAAATAATAAAGATGAAAGCGAAACTAACTCAACCTATAAGGGACTAAATAATTCAAGCTAGAGATACTAAGTTGAAACTTTTAAAACCATAATGACCTAATAGAAATTTTAGCCCTACCATAAAGACCAAATTTGTAATTTAACCTAAAACTAATGATTAGCGACATGATTTCTAAAACATATCTCTCAGTTTCTATTGTAGCATAACTGACAGGCACATCAAATTATTTCTTGTAAATAGGGCGTAGACCATAGTTTAGATGTATGAAATGCCATTATCACCACTCTTTGTCTTGGGATCCTTCTGAAAAGGATGAAGTAGAAGAAAGAGGAAGAAGAGGCTGGCAAGCTTGAGCAGTACTAATGTTGAATGCTGAGTTAAGTATCCTCTGTTAATGTATGCTTATATCCTGACAAGCGAGAACGATAATATCTTGGTCGTTATTTTGGAGTACCACTTGAAATTGAATACCCTTTTCCTTGTAATTTGATTGTAGGGTGTTTGTTTGTGTATTTATATACCAAAGAACTTAAAAATCACTCATGAGCAACGAGTACTGAAGCGCAGTATGCATTTTGGTGCCTATTGAACATCTGGGCAGCTCTAAGTAGATCAAGAGGTCGTTCTGCAGAGGTAGAAAATTTCTCCAATCGGTTTGCTGCAAATTGGTAAACTTCTGTTAACATTGCCTAATTGCACTAGTTTGCTCCATTCTTGTGCCTTATCACCTCTTTAAATCCAAAAGCTTGAAAACGAAGACGAATTTAATTACACGGTTGTAATTATTTCTTGAGTTTTGAAATTATCAAATAGTATAAAGTTGAAACATATGATGAAATGAAACGGTTAAGCTGTTTCAGTGTTTTGTTTTTTCTTTACTTTTTATTTGAATTTAATAACTTCATGACTTTTTCCAAATCCCAATAAACCGAAATGGAATATGTTATCATGTATGTAGGCCCATCCCTGTCGTCATGTATAATAAAGCTATAAAACAAAACAAGGGCATTCCTGATATTGAAGCATCATATGCTAATAGATAAACATTGAAGGATGATATGAACCATCTGGACATCAAATTATTATTTGTATTTTATTTAATAATTTTGATATAATTCTAATATTTTTGAATTTTATCCTTTTTATGACATATTAAGTAGGGACATTTTTGTCTTTTTATTATGATCTATAATGAGGCAATAGAGTTTTCATTAGGATTATCTAAAGTCTTGCTATTAGGTTGTTTCGGTAGATTACAATAAATCGAATTTTGACCTTTGTGTTTCTTTCAAGTTTAGTCTAGAGAGTTTCTTGAATTTTGCAATTTATGTGGAATTGCATGTCAAGCACATTCAAGTAGTATTGATCATCTTATCTTGCGGAGTGTTCGAATCATGGGCCAGGAAACTTGTTCTTTGTCTCAGATCTTTGATCTTTAGGCAATTCGTGTCTAACCTAATTCTTAGGGTTGAAATAGACTTGATTTTAGGGTTTTAGTGTTTGAGAATAAGTGGTTCACATATTCAAAGGATTCTTAATTTCAAGTCAATAAGGTTTTCCTATCAAATTTCTTCTAATCTCTGTCTCTCTCTAACACTGTATAAGGTAAAACAGGAATAACTTTTTAAATGAGGGAATCGGTATAATTTGATGGAGCCTCTTTTCTTAACTTTTGGAACTTTTCTAGCAGATTCATCCACTCCTGAGAATGACCCGCTTTAATTATTTATTGAGAGTATCTGATCCTCAATAATCAGTAGATATGAAAAGAAGAACCTTTTGATGTGGATAAGTTTTGTCACAGTTCCACAATTCAAAAGCAGCAAATAACTTTAGTTTTGATCTTCAATAACTTTCGTGTGCACTTTAGAACTTGTGCTTAATGGAAATTATAACTTTATTTCTCTCTTTTCTGATTTGTATTCAAATTGGGGAAGATACTGATATTATATCCTATTATTGTTGATACTAAAGAAATATGAACTTAGCCAGATTCCTCTTTTTGACATAAGAGATAGAGTGGGCTTTTTTGTATGGTTGCTTTCACTAAGGACAAATCAAGAAGAATCAAAATATCACCTCTTGAATTGAACTATAACTACTTCTAGCCTCACGCACTAGTTGAGGATAAATCTCTTAATTTTCATCATATTTATATTGTAATTAACAAGTCTTTTGCGCTTTTAAATCGTCAAGTTTCCATACTTCTTGCAGCCTCCAGGTATGGCCTCCGATGGCAGCCTTAGTGTTTCGGTTTCCACATCTCCTAAACATGGAAACAGAGATGCTGAGACAGTGACGTCGAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGGTGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCATCAGCATGGATGAAGCGTTCAAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCGCCCAAAGAATCACATGGATCTTCCTAAGGCCATGGGGCATGTGCATGAAGCTGAATACATGTAACACACCTTAAACTTATATCCTCTTAATTCTCTAAAGTTGTGGAGAAGAAAAGCTTTGATTTTATATCTCAACTTTGTATGGCATGGAATATATATAACATGTTTGCCTGTGCGTGTTCACGCACACAACGTTTATCTGTGTATGTGTGTGGGAAAAGTAAATTTGTTCGAAAATTCTTCATTCTTGGTGTGGATTAAGTATGTAGAGTTGCATAACTTGTATCATTCTTTCTTGAAATATAATAGACTAATCTTCTTCTTCCTTTTGTACTACTTTGGGAATGAGGGATCGAGCCTTGGACCTCTAAGGAGGAAGGTTTTGTCAATTTACATTGCGATGAGCTTACCTTTAATACCACTGTTAGGATGTTATGTAGCAACATACTTGATCTAGACCATTAACTGAATCAACAGTCGAAAATTATTTCGACTTCAACTCTGTAAATTCAAAAATAGTTTGTTTTTACAAAATTCTTATTTGAGGAAGACATGGATTTTCAGCCAAACATTGATTGCATGTGGGGAGAGAGATCTTTTTATGGGCATATTGAATTTGGATGAGATTATCTATGGATTGAGAAGAAAAGAAAGGGAAATAGTCGTCACTCATGGCCTACCCTTAGAATATTATTAGTGGGAATGGGATTTGGTGGTCAGATTATCTCTGTCTCTGTTACTTGTCAACCTCCTTATCTTCAATTATTGCAACTCCTTACATACTTTTGTTCA

mRNA sequence

ATAAAGATTTTGACAATGGCTATTGGATACGGAATTTCCCTTTTCTCTCCGCTCATTGTTAGAGCTTAAAACCTCAGTGTTACAGGATTCGAACCAGGCTCAAGACTCAGGTTTGACACCCATTTCATGGCGGCCGAGGAAGGAAAGCTCATTCGGACTCGTCGAAACCAGCTCGACTTCCCATCCCGCAACTCGCAGTATGCATTTTGGTGCCTATTGAACATCTGGGCAGCTCTAAGTAGATCAAGAGGTCGTTCTGCAGAGCCTCCAGGTATGGCCTCCGATGGCAGCCTTAGTGTTTCGGTTTCCACATCTCCTAAACATGGAAACAGAGATGCTGAGACAGTGACGTCGAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGGTGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCATCAGCATGGATGAAGCGTTCAAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCGCCCAAAGAATCACATGGATCTTCCTAAGGCCATGGGGCATGTGCATGAAGCTGAATACATGTAACACACCTTAAACTTATATCCTCTTAATTCTCTAAAGTTGTGGAGAAGAAAAGCTTTGATTTTATATCTCAACTTTGTATGGCATGGAATATATATAACATGTTTGCCTGTGCGTGTTCACGCACACAACGTTTATCTGTGTATGTGTGTGGGAAAAGTAAATTTGTTCGAAAATTCTTCATTCTTGGTGTGGATTAAGTATGTAGAGTTGCATAACTTGTATCATTCTTTCTTGAAATATAATAGACTAATCTTCTTCTTCCTTTTGTACTACTTTGGGAATGAGGGATCGAGCCTTGGACCTCTAAGGAGGAAGGTTTTGTCAATTTACATTGCGATGAGCTTACCTTTAATACCACTGTTAGGATGTTATGTAGCAACATACTTGATCTAGACCATTAACTGAATCAACAGTCGAAAATTATTTCGACTTCAACTCTGTAAATTCAAAAATAGTTTGTTTTTACAAAATTCTTATTTGAGGAAGACATGGATTTTCAGCCAAACATTGATTGCATGTGGGGAGAGAGATCTTTTTATGGGCATATTGAATTTGGATGAGATTATCTATGGATTGAGAAGAAAAGAAAGGGAAATAGTCGTCACTCATGGCCTACCCTTAGAATATTATTAGTGGGAATGGGATTTGGTGGTCAGATTATCTCTGTCTCTGTTACTTGTCAACCTCCTTATCTTCAATTATTGCAACTCCTTACATACTTTTGTTCA

Coding sequence (CDS)

ATGGCGGCCGAGGAAGGAAAGCTCATTCGGACTCGTCGAAACCAGCTCGACTTCCCATCCCGCAACTCGCAGTATGCATTTTGGTGCCTATTGAACATCTGGGCAGCTCTAAGTAGATCAAGAGGTCGTTCTGCAGAGCCTCCAGGTATGGCCTCCGATGGCAGCCTTAGTGTTTCGGTTTCCACATCTCCTAAACATGGAAACAGAGATGCTGAGACAGTGACGTCGAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGGTGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCATCAGCATGGATGAAGCGTTCAAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCGCCCAAAGAATCACATGGATCTTCCTAA

Protein sequence

MAAEEGKLIRTRRNQLDFPSRNSQYAFWCLLNIWAALSRSRGRSAEPPGMASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPANNPVASLSPKESHGSS

Homology

[Close]

BLAST of CcUC11G210780.1 vs. NCBI nr
Match: KAA0061558.1 (hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-31
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MASDGSL VSVSTSPKH NRDAET+ SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 110 SKSMPANNPVASLSPKESHGSS 132
           SKSMPANNPVASLSPK S GSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of CcUC11G210780.1 vs. NCBI nr
Match: KGN60621.1 (hypothetical protein Csa_019426 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 2.3e-31
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MASDGSLSVSVSTSPKH NRDAETV S+SPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 110 SKSMPANNPVASLSPKESHGSS 132
           SKSMP NNPVASLSPKES  SS
Sbjct: 61  SKSMPTNNPVASLSPKESLESS 82

[Close]

BLAST of CcUC11G210780.1 vs. NCBI nr
Match: KAG7030425.1 (hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.8 bits (364), Expect = 5.2e-31
Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MASDGSLSV VSTSPKHGNRDAETV SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 55  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 114

Query: 110 SKSMPANNPVASLSPKESHGSS 132
           SKSMPA++PVASLS KES GSS
Sbjct: 115 SKSMPADHPVASLSSKESLGSS 136

[Close]

BLAST of CcUC11G210780.1 vs. NCBI nr
Match: TYK10714.1 (hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 144.8 bits (364), Expect = 5.2e-31
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MASDGSL VSVS+SPKH NRDAET+ SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 110 SKSMPANNPVASLSPKESHGSS 132
           SKSMPANNPVASLSPK S GSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of CcUC11G210780.1 vs. NCBI nr
Match: XP_022946647.1 (uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946649.1 uncharacterized protein LOC111450652 [Cucurbita moschata])

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-30
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MASDGSLSV VSTSPKHGNRDAETV SSSPKGQCLCSPT+HQGSFRCRLHRS SSAWMKR
Sbjct: 43  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKR 102

Query: 110 SKSMPANNPVASLSPKESHGSS 132
           SKSMPA++PVASLS KES GSS
Sbjct: 103 SKSMPADHPVASLSSKESLGSS 124

[Close]

BLAST of CcUC11G210780.1 vs. ExPASy TrEMBL
Match: A0A5A7V1X5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001200 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 8.6e-32
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MASDGSL VSVSTSPKH NRDAET+ SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 110 SKSMPANNPVASLSPKESHGSS 132
           SKSMPANNPVASLSPK S GSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of CcUC11G210780.1 vs. ExPASy TrEMBL
Match: A0A0A0LKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MASDGSLSVSVSTSPKH NRDAETV S+SPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 110 SKSMPANNPVASLSPKESHGSS 132
           SKSMP NNPVASLSPKES  SS
Sbjct: 61  SKSMPTNNPVASLSPKESLESS 82

[Close]

BLAST of CcUC11G210780.1 vs. ExPASy TrEMBL
Match: A0A5D3CHP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00230 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.5e-31
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MASDGSL VSVS+SPKH NRDAET+ SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 110 SKSMPANNPVASLSPKESHGSS 132
           SKSMPANNPVASLSPK S GSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of CcUC11G210780.1 vs. ExPASy TrEMBL
Match: A0A6J1G498 (uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC111450652 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.2e-30
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MASDGSLSV VSTSPKHGNRDAETV SSSPKGQCLCSPT+HQGSFRCRLHRS SSAWMKR
Sbjct: 43  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKR 102

Query: 110 SKSMPANNPVASLSPKESHGSS 132
           SKSMPA++PVASLS KES GSS
Sbjct: 103 SKSMPADHPVASLSSKESLGSS 124

[Close]

BLAST of CcUC11G210780.1 vs. ExPASy TrEMBL
Match: A0A061GNT6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037897 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.2e-18
Identity = 53/76 (69.74%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 50  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 109
           MAS G  +++VSTSPK  N +A   T+S   GQCLCSPT HQGSFRCR HRS+SSAWMKR
Sbjct: 1   MASHG--NITVSTSPKGSNSEAAVPTNSPKGGQCLCSPTTHQGSFRCRFHRSSSSAWMKR 60

Query: 110 SKSMPANNPVASLSPK 126
           SKSMPAN  +ASLSPK
Sbjct: 61  SKSMPANGSLASLSPK 74

[Close]

BLAST of CcUC11G210780.1 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0


Query: 76  SSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPAN 117
           SSS +  CLC+PT H GSFRCR HR  +   M R  S+P+N
Sbjct: 58  SSSVRQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPSN 98

[Close]

BLAST of CcUC11G210780.1 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 67  GNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPA 116
           G+R     TS + K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 29  GSRGLSRQTSMT-KTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]

BLAST of CcUC11G210780.1 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 67  GNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPA 116
           G+R     TS + K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 29  GSRGLSRQTSMT-KTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]

BLAST of CcUC11G210780.1 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 4.4e-04
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 76  SSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPANNPVASLSPKESH 129
           +S  K  C+CSPT H GSF+C+LHR+ S   ++R+KS+   N + SL  K  H
Sbjct: 25  TSITKTICICSPTTHPGSFKCKLHRTPS---LQRNKSV-ETNILQSLMTKPDH 73

The following BLAST results are available for this feature:

BLAST of CcUC11G210780.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061558.1	1.8e-31	91.46	hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa]	[more]
KGN60621.1	2.3e-31	91.46	hypothetical protein Csa_019426 [Cucumis sativus]	[more]
KAG7030425.1	5.2e-31	91.46	hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
TYK10714.1	5.2e-31	90.24	hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa]	[more]
XP_022946647.1	2.6e-30	90.24	uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 unchar...	[more]

BLAST of CcUC11G210780.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC11G210780.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V1X5	8.6e-32	91.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LKU3	1.1e-31	91.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1	[more]
A0A5D3CHP3	2.5e-31	90.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1G498	1.2e-30	90.24	uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]
A0A061GNT6	3.2e-18	69.74	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037897 PE=4 SV=1	[more]

BLAST of CcUC11G210780.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13227.1	2.8e-06	53.66	serine-rich protein-related	[more]
AT1G67910.1	1.8e-05	53.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67910.2	1.8e-05	53.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G24577.1	4.4e-04	45.28	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..86
None	No IPR available	PANTHER	PTHR33132:SF37	SERINE-RICH PROTEIN-LIKE PROTEIN	coord: 49..126
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 49..126

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC11G210780	CcUC11G210780	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC11G210780.1-exon	CcUC11G210780.1-exon-CicolChr11:2684687..2684879	exon
CcUC11G210780.1-exon	CcUC11G210780.1-exon-CicolChr11:2687800..2687870	exon
CcUC11G210780.1-exon	CcUC11G210780.1-exon-CicolChr11:2689452..2690474	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC11G210780.1-five_prime_utr	CcUC11G210780.1-five_prime_utr-CicolChr11:2684687..2684812	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC11G210780.1-cds	CcUC11G210780.1-cds-CicolChr11:2684813..2684879	CDS
CcUC11G210780.1-cds	CcUC11G210780.1-cds-CicolChr11:2687800..2687870	CDS
CcUC11G210780.1-cds	CcUC11G210780.1-cds-CicolChr11:2689452..2689709	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC11G210780.1-three_prime_utr	CcUC11G210780.1-three_prime_utr-CicolChr11:2689710..2690474	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC11G210780.1	CcUC11G210780.1-protein	polypeptide