CcUC10G207220.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G207220.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr10: 34107803 .. 34110638 (+)
Sequence length	222
RNA-Seq Expression	CcUC10G207220.1
Synteny	CcUC10G207220.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCTGATCTTACTGCTACAACCGTGGTTCGTCGGCCAGGAAGCAATAGTTGGACTTAATTGTAGGACTGGAAAACCATTCGGATAGGCATTATGACAAGAGAGAAATGGTGTGTCAACTTGAATTTAGGTTATATTTTCATAATAGTATAATATAGATTTATTTATTATTGATAGAATTTTATTGATTTATCACAATTTTCTTGCCAAAACACCCTTAATTGCAATAAATGAGTTAACATTTTTTTTAATGAGCCATAATTTAGGATACCTTCAAAGTGTGGAGATATGATTTTTGTTAAAATCTCATGTTTAAATGGAAGACTTGTGTATTTAAAGAGTATGTTTTGTAATATTTAAATTAAAAAAAATATATGTGTTGCAATATTAAAATTTAGACTTTTATAGATTTTGGTCAAATTTAGTTTATTATATTCTTGCATATAGAGTACTTTTGTTTTTTCATTAAAAAAAAAGAAAGAAAAGAAAGAGTATCGTTGTTTTTATTAGGAGATTTCAAGAACTTGTTTACTTTAATTAAAAAGTATATTGCAAAATACCCATTTAAACATATCATCATTTTTTAAAAAAATTATTTGTATACAGTAGAAATTAATGTTATTATTCTTTTAAAAAAATGAGTAATAACTCTCGATCGGAACCCTAACTCCCGAAAAATTTTCACAACGAATCTCACCTCAATTTTCGTAAAATTAAATGAAAAATTTCACATCAACGAAAAGTTAAATAGAGGGCAAGGACGGGGACTAGGTATGTAATTTTCGTCTCATGCCTCCACTATGAACATCTCTACCTCTAGTAATCATACACTATCATCATTCAAATGAGATCAAAATATTATATATATTGTGAGGTCAATTGTCATGAGAATAAGAGATCAAATCATCAATATTTAAAATTATAATTAAGTCCCTATTTATAGACAAAATTGGCTAAAGAAAGAACTTGTTGGTGCCAAAATTTAAGTAGAAAAATACACATTTGATCTTCACATGACAATAACGATAAATTTTGTAATTTGGGGAAGAAAGTGATATGCAAAATAGGATGATATGCACACCATTGTAGTGCTTCCTACATAGGCTTCGATGCTTAAATCAACAAGTTCAAAGTTTAAGTATTAGAATGAACTTACTCGTTATTGGAGCTATCACGATGTATTCATTGGTGTAATTGACCTAGGTCCTCCTAATAGGCTTTCGGTTCTACATTAGGATTGTTCTTCCACTCCTTCAACTAGAAGATGCGAGGGGCGTGTCTTGTTTAACATTTTGTTAGGGTAGGCCTCGACCTTAGTCGAGGTTGAGTACCTTCATCCAGACCCATTTTTAGTCCCAAGGTGATTCTTTAGGCTGAGGCATGTATTGGGTGTCACAATTGCACCACCAATGGCTTTCACTAAGCGATTGTGCAAAACTTGTTATCGCCCACAAACAAGTTAGCCAATTCAATTTTCGACTGCCTACGACACACTGGGTGCCTCTTGCAACCTCTACCTCGTTTACAGAGAAAATAGTTTTAGTAACAGATTTAGAGGAAAATGTTTTCGTAAATGTTTGAAAGCATATTTGAGAAAATAACTTTTTTCGTAAGGCTAGAAAGCAGGGACAACACGACTCAATAACTTACAACTTTGGTAAGAAAGTTTTATGGTTAGTTAGTATATTATATGCATTTTAAGGGCTGTCACCCTTGCATATGCGAAGTGCTGAGTGAGGCACTTACAACCAGAAGTACAAGGAAAGCAAACTAATTTATATGATGAAATACATAATAGAAAAGTATAATAAAAAGGGATTGGTTTGGGCATGCTACCTGTCATGACCATGACATTGGGCATGTTCCATTAGGTGTTTTGCTAACTAGGCTCAACCATGACCTTACTGAAGGGCAAGCATGCTAGCTTGGGCCAAGGCTGAAGCCAACTCCTTCTAGGCACGCTTTGGTCCCAGGATGCCATTTCGTTTTGCATCGAATCTTGTTATTTCCTTCACATGATTATTTGATGTTAATTGTAACATTCGATCCAAAATCAAAGAACTCTATACAAGTCTTGGATATCAGGAGGATATACATATTAAACAATAATTTCTCTGAAAATATAGAGCAGCTCATTATTGGATATTATCATAATACTTATTGACTCTTATTATTAAATATTGTCAATAATTTTTAATAAAAAAATTGTTAACAATTGATAGTCTTTTTGATATTATATTGCGTATACTTTCTTATCCGATTTATTGATTGGAGTATATTTGACATGCTTTTGGCGGCATTTGACCAGAATATTTTACTCTGGATGCCATGTCATCGTGAAATACACTCATAACTTAATTAATTTTCCTTTGATCCAATATACATATCTTTTTATATCATAACGAAATATTTTATTGTATTTTAAAAGCCTCGTCAACATTAAAAATTAAAGTCATCGCCCCGCCAAATTTTCACGTTTCTCCGGCCCCGTCCATGGCTTCTTTTTCCTTACCTACCTTCTTCACTCAGTAATGGCGACCGCTTCTACAGTTCCACTTCCAATTCCTCCTTCGTTTCTCAATATTTCTCCTTCCACGCTCGTACTTCGCATCTGTAATCAGAAACCCTAGGAATCCATCTTCTACTTTCAACATCCGATCTCTCATTTTCTACAAATTTCCGTTCCTCCTTCCAGTGTGTAAAATTTTTCCCAATGTCGACTTGTAGCCTTGTGCTATCTTTATTCTTTGTTTTTCTTAGTTTTTGTTTACTTGCGCCTCATTATCTTGTGGCAGAGGCGATGGCATAGCAGTCAGGGAAAGCGATTTAATTAA

mRNA sequence

ATGGGCCTGATCTTACTGCTACAACCGTGGTTCGTCGGCCAGGAAGCAATAGTTGGACTTAATTTAATGGCGACCGCTTCTACAGTTCCACTTCCAATTCCTCCTTCGTTTCTCAATATTTCTCCTTCCACGCTCGTACTTCGCATCTTTTTTGTTTACTTGCGCCTCATTATCTTGTGGCAGAGGCGATGGCATAGCAGTCAGGGAAAGCGATTTAATTAA

Coding sequence (CDS)

ATGGGCCTGATCTTACTGCTACAACCGTGGTTCGTCGGCCAGGAAGCAATAGTTGGACTTAATTTAATGGCGACCGCTTCTACAGTTCCACTTCCAATTCCTCCTTCGTTTCTCAATATTTCTCCTTCCACGCTCGTACTTCGCATCTTTTTTGTTTACTTGCGCCTCATTATCTTGTGGCAGAGGCGATGGCATAGCAGTCAGGGAAAGCGATTTAATTAA

Protein sequence

MGLILLLQPWFVGQEAIVGLNLMATASTVPLPIPPSFLNISPSTLVLRIFFVYLRLIILWQRRWHSSQGKRFN

Homology

The following BLAST results are available for this feature:

BLAST of CcUC10G207220.1 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G207220.1 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G207220.1 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G207220.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G207220	CcUC10G207220	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G207220.1-exon	CcUC10G207220.1-exon-CicolChr10:34107803..34107866	exon
CcUC10G207220.1-exon	CcUC10G207220.1-exon-CicolChr10:34110334..34110417	exon
CcUC10G207220.1-exon	CcUC10G207220.1-exon-CicolChr10:34110565..34110638	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G207220.1-cds	CcUC10G207220.1-cds-CicolChr10:34107803..34107866	CDS
CcUC10G207220.1-cds	CcUC10G207220.1-cds-CicolChr10:34110334..34110417	CDS
CcUC10G207220.1-cds	CcUC10G207220.1-cds-CicolChr10:34110565..34110638	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G207220.1	CcUC10G207220.1-protein	polypeptide