CcUC10G206030.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G206030.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr10: 33143013 .. 33146299 (+)
Sequence length	363
RNA-Seq Expression	CcUC10G206030.1
Synteny	CcUC10G206030.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGTAGAAGAGCCATATATCAACGGGAAAAATTAATAACTCAAATCAGTTTAATTAATCAATATTAAAAGTAGCGGCAAAGCACAAACAGCATTCTTCGGTTAGTTTATTATTTTTGCTTTTAATTATATATAGTGTTATGTAATTCTCGACAGATTGATAATTCTTGTCTGCATATTTAGCTGGAAAATGGTTAAGCTTTTATAATACCTTGTTTCGATCTCGCCAGCCTAGTGCAAATGGCAGCAAACCAACCTTTCTTTGATTTTCCTGTGCAGATCCTTGATTACGCGACCTACAGAGCAGGCAACCCTCATAAAAATGAAACTTGTCACAAAATGAAACATTCGTAGCATTTATAAATTCTTAAGAAAAAATAATATGAAGGAAAACTGATCAAGAATGCTTTTTCCATCCCTAGTTTTTAGGATAAACAAATACAAGATTTTAAGAATTACGAATTAATCTAATGCATAGAACATCAAGTATTCTTTTAAAAATCTTTTATACCCAGGAGACGACATTGCTTTAATTTGGCCAGATTCATATTGTAATGTAGCCTCCAACATGGATTCAGCCATCACCACCCTTTTCTCCATCTCAGCAAGTGAAGCCATAGCTTTCTCATATTTATCCTGTATGTGAATAATAGAGAACAGATAATCACAGAAGAAAAAAAATCTCGGCATGATTATGGCAACGATTGGAAGAGCTTCAGAATTTATACAGGCTAGGATTTGTTTGTATCTTGTAGTATCTACAGATAACAATCAGCACAAACCAATAGTATGTACTTCATCTTTTAAACAAACTCAAGCAATCTAGGGTACAAAAGAATTGAACTATGAGATTTATATATCAGACTCCAGCACAGTAATGTCAGAGAACCAAAAATAATCTGACTAGAAACCAAACCTGAAGCATATGAACAGCATACTTTTGAGCTGCTACGTCTTGCTCAGCGTTTATTCTAGCTTCCTCGGTTACTCTTTGCTCTTGCTCAACACGCATCAACAACTACAGTGTAGAACAATCAATATCAATTGTTTACAGAAGTAATTCAACTGGTGGATAAAACTTAAGACTCAGTTATTGGTTTAGGATCAGGCTTCCTCATCAGAATGTGAATATGATGTCAGCTAACACACACCTGAAGCATTGCAACTTCTTGTTCTTTCTTCTCTGCTAGAGTTTTCTTTAGCTCGGCTACCTCTATCTCCAGTTGTTCAACCTGGAGAATATAAGCAAAATCGTAAGTATGGACAAGAAACCTAAAGGAGAGTTTTAGAAGCAAGTCCACTGTAAACACTTCGATAACCAAGCCTCCACTTATGTACCTAAAAGAGTATAAGTCAAAAGATAAAAGGTTCTCCATGATAAAGGGTGCAGGAGGAAACACATTTTGTGTGGTTCTAATGAAGAAATCACTGATTTCATGGGTAATCCTAGGGGAATGAAGGGCATTGCTAAATGAAAATGCAGTAATTATCGAAGTATATGATCAGGAGAGATGCAAATTTAGGTTAGAACTTTTATTTAATATTTTGTTACGTCAAACATTCTTGCAGCAAGAACAAACGGCTCTTTTAAAAATTTAGACACAAGATGACTTAGGTTTTCTTTTTCATCATGACTAGAATTGGCTCATCTTGAGTTGTAGTTTTGAAAATGCAATCACGACAACAACAAGCATTAGGAAGCTTTCCTCACAAACAAGAGATTTATACCCTGGCACTTAATAGTCGTCGGTTATCTTGGGTGACCATTTCCATAAGTGCTGTTTCTAGCTCCTCGGCTCTGGAAAAGATTGGCAAAAAGAAACAGAAGCTTCAATAACCATCTTCTTTAAACAATCACACGAAGAGTTAGCTCTGAAGAAGAGGCAGGCTTTTTTTGCTACTACGCCATAACCCATGCAATACACTAATCCAAACACATACACATCAAAAGCAAAATATCTTGAAAGGCCCTCAAGGAAGCAATATTGAAGTAGTCGTGCTGATCAGATGTAATGAGTAGGAGGCGAATAAACATGGCTGGAACTCGATAACAGAAGGTGGTGCAAAGTGCCAAGATATCGAAATCATTGTATCTTTTTCTTTACATATTTTTTTCCTAAATTGAATATCGTCACTCACTCATGGAATCTGTGGCAACCACCCAGGGACGAATATAAATTCTCAGATAAGAAGAAAAGCCAAGTCCAATAACATATAGTATTAACCTTAGAACCGCAGATCTTTTTTCCTCCAGCAACCTGCACAACTCAACCTTCAACCATACTACCTGCACAAAAAGCCGCTTATGATTAAAATTAACTCAAACAAGGGAAGCCCTTAAATATCAAGTACCATTCTATCAGCATTGCAATTGGAAATCACACTCAGGTGAACTAAATGCAATAAATGATGATGATCCTCCTCGTCAATGATTATAGGGGGAAAAAGAATTAAGGAAGGCCTTTCAAATTGAAAAATACACCTATAATACCATAGCGACTTGAAACAGACCATATGTGATGGGCATAGATAATTAGTCAATTGGCTAATAAACTCCAGATAAATATAAATCCTACATGGAAAGGGGATAGACCAAAGATTAATGGATAACATTTTAACTTGACAAGTCCTTGTGAAATAAATATCATGACAATGATAAATAGTAAAATCTCTAAAAGATCCTACAAATATTCCTGTACAGGATCCACATCCTAAAATTACAAAGGATGAGACTCTCCTCAAGAGCAGCTTGCAGGCTAATCACTAACAATCACAACCAAGTTATTTATTGAAGCCCACATCCTTTTTGTCATGTCATTGACCTTCAGAATGAAGGAAGCTTCAAATAAATATCGGCAAACAAATATTTGGTAACACCAAATTACCAATGGGAAAGATAGTTACTTGTTCTTGAAGGTCTGGGAGTGATTCTGTTTCTGAATCACCGGCTAATCCACTAAGGAAGTCATCCAGATTAGGGGTACAGGATCCTACATCGGCTCCTGCAGCTGTCTTTTTCCTCTCCATAGGTGATCCGGGATCATGCTTGAAACTATAAAGCTTGGAAGCTAGCCCTTTGGAATCCTTCCAAACCCGACCCTTCTTTGTTCTTTCTTCAATTACAGCTAGCACAGATGGTCGGAGCTTTTCTCTCAACTCTACTAGTCTTACTTCAGTTACAGTCAGAAAACCCATGCAAGCAGTCAACACAAGCTGGCTACTATCAAATGTGGAACCAGCAAGGGATTGTAACAGAGTTATGGCGTCCCCCGCATCTTTTGTAG

mRNA sequence

ATGGGTGGAGACGACATTGCTTTAATTTGGCCAGATTCATATTGTAATGTAGCCTCCAACATGGATTCAGCCATCACCACCCTTTTCTCCATCTCAGCAAGTGAAGCCATAGCTTTCTCATATTTATCCTATAACAATCAGCACAAACCAATACTCGGCTACCTCTATCTCCAGTTGTTCAACCTGGAGAATATAAGCAAAATCCTAGCACAGATGGTCGGAGCTTTTCTCTCAACTCTACTAGTCTTACTTCAGTTACAGTCAGAAAACCCATGCAAGCAGTCAACACAAGCTGGCTACTATCAAATGTGGAACCAGCAAGGGATTGTAACAGAGTTATGGCGTCCCCCGCATCTTTTGTAG

Coding sequence (CDS)

ATGGGTGGAGACGACATTGCTTTAATTTGGCCAGATTCATATTGTAATGTAGCCTCCAACATGGATTCAGCCATCACCACCCTTTTCTCCATCTCAGCAAGTGAAGCCATAGCTTTCTCATATTTATCCTATAACAATCAGCACAAACCAATACTCGGCTACCTCTATCTCCAGTTGTTCAACCTGGAGAATATAAGCAAAATCCTAGCACAGATGGTCGGAGCTTTTCTCTCAACTCTACTAGTCTTACTTCAGTTACAGTCAGAAAACCCATGCAAGCAGTCAACACAAGCTGGCTACTATCAAATGTGGAACCAGCAAGGGATTGTAACAGAGTTATGGCGTCCCCCGCATCTTTTGTAG

Protein sequence

MGGDDIALIWPDSYCNVASNMDSAITTLFSISASEAIAFSYLSYNNQHKPILGYLYLQLFNLENISKILAQMVGAFLSTLLVLLQLQSENPCKQSTQAGYYQMWNQQGIVTELWRPPHLL

Homology

The following BLAST results are available for this feature:

BLAST of CcUC10G206030.1 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G206030.1 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G206030.1 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G206030.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G206030	CcUC10G206030	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G206030.1-exon	CcUC10G206030.1-exon-CicolChr10:33143013..33143019	exon
CcUC10G206030.1-exon	CcUC10G206030.1-exon-CicolChr10:33143531..33143653	exon
CcUC10G206030.1-exon	CcUC10G206030.1-exon-CicolChr10:33143780..33143802	exon
CcUC10G206030.1-exon	CcUC10G206030.1-exon-CicolChr10:33144218..33144268	exon
CcUC10G206030.1-exon	CcUC10G206030.1-exon-CicolChr10:33146141..33146299	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G206030.1-cds	CcUC10G206030.1-cds-CicolChr10:33143013..33143019	CDS
CcUC10G206030.1-cds	CcUC10G206030.1-cds-CicolChr10:33143531..33143653	CDS
CcUC10G206030.1-cds	CcUC10G206030.1-cds-CicolChr10:33143780..33143802	CDS
CcUC10G206030.1-cds	CcUC10G206030.1-cds-CicolChr10:33144218..33144268	CDS
CcUC10G206030.1-cds	CcUC10G206030.1-cds-CicolChr10:33146141..33146299	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G206030.1	CcUC10G206030.1-protein	polypeptide