CcUC10G205560.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G205560.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr10: 32746827 .. 32748626 (+)
Sequence length	1800
RNA-Seq Expression	CcUC10G205560.1
Synteny	CcUC10G205560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCCATCTCTTATCCCATGTCGAATCAGGCGATTGCCGCGAACATTGCGAAGTTAATTCTGAAATCTGGCCTTACACCCTTCAAAACGACCCCATCTCTGCTTTCAAATCTTGACTCTCGGGTAACGCAGCTGGTTTTGTCCGATCCAAATGTTCCTACTCAGTCCTGTTTGAGTTTTTTCAACTTTCTCAGAAAAAACCCTTCTCAGAAACCCGATCTTCGGGCACATTTAATCCTCATATGTAGGTTATATCGAGCTCGGAAGTTCGCGGTAATGAAAAATGTGTTGAACTACATCGTCAATGATGGAAATCTTCGGAGCACTGCTGATAGGATTATTTCTTCGATTGGAGGTGAGTGTAATGAGCCTAAATTTGTTCATAAATTTTGTGATATGTTGTTTAGAGTATATGTGGATAACAGAATGTTTGATTCGGCTTTGGAGCTCTTTGATTACGCTAGAAAGAGTGGGTTGGAGATTGAAGGGAGATCATGTTTTGTGTTTTTACTTGATTTAAAGAGGTCTGGTAATGTAGAATTATCTCTAGAATTCTTGCGCCGAATGGTTGATTCGGGTGTGGAAATAAGTGTTTATTCGTTGACGACTGTGGTTGATGGGTTGTGTAAGAAAGGGGAGGTTGTTAGGGCTAAAGCTTTGATGGATGAACTTGTTTGCAAAGGGTTTAAGCCCAATGTTTTCACATATAATACTCTTTTGAATGGTTATATTGAAAGGAAGAATATGGGAGGTGTAAATGAGATTCTTAGTTTGATGAAGAAGGATGGTGTAGATTATAATGCAACAACATATACAATCTTGATTGAATGGTATTCAAGAAGTTTGAAAATTGAAGAAGCAGAGAAGCTGTTTGATGAAATGCTTAAGAAAGGAATAGAGCCTGATGTGTATGTTTACACCTCCATTATTAATTGGAATTGTAGTTCTGGGAACATGAAGAGGGCCTTTACTCTGTTTGATGAAATGACTGAGAGAGGGCTTGTTCCAAATGCTTACACTTATGGGGCCCTTATAAATGGTGCCTGCAAGGCAGGGCAGATGGAGGCAGCTGAGATGCTGGTAAATGACATGCAAACCAAAGGAGTTAATGTAAATCAAGTCATATTCAATACGTTGATCGATGGGCACTGCAAAAAAGGGATGATTGACGAAGCTCTAAGGCTGCAGGATATAATGCAGCAAAAAGGATTCGAGATTGATGTGTTTACTTATAACATAATTGCCAATGGATTTTGTCGATCGAATCGGCGAGAGGACGCAAGGAGATTATTGCTCACAATGGAAGAAAGGGGAGTGGCTCCGAATGCAGTGAGCTTCAGTACTTTGATTGACATTTACTGCAAAGAAGGAAATTTTGCAGAAGCAAAAAGGCTGTTGAAGGAAATGGAGAAGAAGGGTGAGGTACCTAATGTTGTTACATACAATACTTTCATTGAAGGATATGGCAAGAAGGGAAAGATGGAGGAGGCATACAAGCTGATGGATGAGATGCAGGAAAGGGGGTTAATACCAGACACATTTACATATACATCACTTATTAATGGAGAATGTGTTCGTGGGAATGTGGATAGGGCTCTTGAACTGTTCAATGAAATGCCTCAACGAGAGCTAAATAGAAATGTGGTAACTTACACGGGGATGATCTCTGGGTTGTCCAAGTATGGCAGAGCTGATGAAGCATTTAAATTATACGATGAAATGAAAGCAGCAGGCATTGAACCTGATGATAGAATATATTCTTCCTTGACAGGGAGCCTTCATGGAGCAGGATCTTAG

mRNA sequence

ATGAAACCCATCTCTTATCCCATGTCGAATCAGGCGATTGCCGCGAACATTGCGAAGTTAATTCTGAAATCTGGCCTTACACCCTTCAAAACGACCCCATCTCTGCTTTCAAATCTTGACTCTCGGGTAACGCAGCTGGTTTTGTCCGATCCAAATGTTCCTACTCAGTCCTGTTTGAGTTTTTTCAACTTTCTCAGAAAAAACCCTTCTCAGAAACCCGATCTTCGGGCACATTTAATCCTCATATGTAGGTTATATCGAGCTCGGAAGTTCGCGGTAATGAAAAATGTGTTGAACTACATCGTCAATGATGGAAATCTTCGGAGCACTGCTGATAGGATTATTTCTTCGATTGGAGGTGAGTGTAATGAGCCTAAATTTGTTCATAAATTTTGTGATATGTTGTTTAGAGTATATGTGGATAACAGAATGTTTGATTCGGCTTTGGAGCTCTTTGATTACGCTAGAAAGAGTGGGTTGGAGATTGAAGGGAGATCATGTTTTGTGTTTTTACTTGATTTAAAGAGGTCTGGTAATGTAGAATTATCTCTAGAATTCTTGCGCCGAATGGTTGATTCGGGTGTGGAAATAAGTGTTTATTCGTTGACGACTGTGGTTGATGGGTTGTGTAAGAAAGGGGAGGTTGTTAGGGCTAAAGCTTTGATGGATGAACTTGTTTGCAAAGGGTTTAAGCCCAATGTTTTCACATATAATACTCTTTTGAATGGTTATATTGAAAGGAAGAATATGGGAGGTGTAAATGAGATTCTTAGTTTGATGAAGAAGGATGGTGTAGATTATAATGCAACAACATATACAATCTTGATTGAATGGTATTCAAGAAGTTTGAAAATTGAAGAAGCAGAGAAGCTGTTTGATGAAATGCTTAAGAAAGGAATAGAGCCTGATGTGTATGTTTACACCTCCATTATTAATTGGAATTGTAGTTCTGGGAACATGAAGAGGGCCTTTACTCTGTTTGATGAAATGACTGAGAGAGGGCTTGTTCCAAATGCTTACACTTATGGGGCCCTTATAAATGGTGCCTGCAAGGCAGGGCAGATGGAGGCAGCTGAGATGCTGGTAAATGACATGCAAACCAAAGGAGTTAATGTAAATCAAGTCATATTCAATACGTTGATCGATGGGCACTGCAAAAAAGGGATGATTGACGAAGCTCTAAGGCTGCAGGATATAATGCAGCAAAAAGGATTCGAGATTGATGTGTTTACTTATAACATAATTGCCAATGGATTTTGTCGATCGAATCGGCGAGAGGACGCAAGGAGATTATTGCTCACAATGGAAGAAAGGGGAGTGGCTCCGAATGCAGTGAGCTTCAGTACTTTGATTGACATTTACTGCAAAGAAGGAAATTTTGCAGAAGCAAAAAGGCTGTTGAAGGAAATGGAGAAGAAGGGTGAGGTACCTAATGTTGTTACATACAATACTTTCATTGAAGGATATGGCAAGAAGGGAAAGATGGAGGAGGCATACAAGCTGATGGATGAGATGCAGGAAAGGGGGTTAATACCAGACACATTTACATATACATCACTTATTAATGGAGAATGTGTTCGTGGGAATGTGGATAGGGCTCTTGAACTGTTCAATGAAATGCCTCAACGAGAGCTAAATAGAAATGTGGTAACTTACACGGGGATGATCTCTGGGTTGTCCAAGTATGGCAGAGCTGATGAAGCATTTAAATTATACGATGAAATGAAAGCAGCAGGCATTGAACCTGATGATAGAATATATTCTTCCTTGACAGGGAGCCTTCATGGAGCAGGATCTTAG

Coding sequence (CDS)

ATGAAACCCATCTCTTATCCCATGTCGAATCAGGCGATTGCCGCGAACATTGCGAAGTTAATTCTGAAATCTGGCCTTACACCCTTCAAAACGACCCCATCTCTGCTTTCAAATCTTGACTCTCGGGTAACGCAGCTGGTTTTGTCCGATCCAAATGTTCCTACTCAGTCCTGTTTGAGTTTTTTCAACTTTCTCAGAAAAAACCCTTCTCAGAAACCCGATCTTCGGGCACATTTAATCCTCATATGTAGGTTATATCGAGCTCGGAAGTTCGCGGTAATGAAAAATGTGTTGAACTACATCGTCAATGATGGAAATCTTCGGAGCACTGCTGATAGGATTATTTCTTCGATTGGAGGTGAGTGTAATGAGCCTAAATTTGTTCATAAATTTTGTGATATGTTGTTTAGAGTATATGTGGATAACAGAATGTTTGATTCGGCTTTGGAGCTCTTTGATTACGCTAGAAAGAGTGGGTTGGAGATTGAAGGGAGATCATGTTTTGTGTTTTTACTTGATTTAAAGAGGTCTGGTAATGTAGAATTATCTCTAGAATTCTTGCGCCGAATGGTTGATTCGGGTGTGGAAATAAGTGTTTATTCGTTGACGACTGTGGTTGATGGGTTGTGTAAGAAAGGGGAGGTTGTTAGGGCTAAAGCTTTGATGGATGAACTTGTTTGCAAAGGGTTTAAGCCCAATGTTTTCACATATAATACTCTTTTGAATGGTTATATTGAAAGGAAGAATATGGGAGGTGTAAATGAGATTCTTAGTTTGATGAAGAAGGATGGTGTAGATTATAATGCAACAACATATACAATCTTGATTGAATGGTATTCAAGAAGTTTGAAAATTGAAGAAGCAGAGAAGCTGTTTGATGAAATGCTTAAGAAAGGAATAGAGCCTGATGTGTATGTTTACACCTCCATTATTAATTGGAATTGTAGTTCTGGGAACATGAAGAGGGCCTTTACTCTGTTTGATGAAATGACTGAGAGAGGGCTTGTTCCAAATGCTTACACTTATGGGGCCCTTATAAATGGTGCCTGCAAGGCAGGGCAGATGGAGGCAGCTGAGATGCTGGTAAATGACATGCAAACCAAAGGAGTTAATGTAAATCAAGTCATATTCAATACGTTGATCGATGGGCACTGCAAAAAAGGGATGATTGACGAAGCTCTAAGGCTGCAGGATATAATGCAGCAAAAAGGATTCGAGATTGATGTGTTTACTTATAACATAATTGCCAATGGATTTTGTCGATCGAATCGGCGAGAGGACGCAAGGAGATTATTGCTCACAATGGAAGAAAGGGGAGTGGCTCCGAATGCAGTGAGCTTCAGTACTTTGATTGACATTTACTGCAAAGAAGGAAATTTTGCAGAAGCAAAAAGGCTGTTGAAGGAAATGGAGAAGAAGGGTGAGGTACCTAATGTTGTTACATACAATACTTTCATTGAAGGATATGGCAAGAAGGGAAAGATGGAGGAGGCATACAAGCTGATGGATGAGATGCAGGAAAGGGGGTTAATACCAGACACATTTACATATACATCACTTATTAATGGAGAATGTGTTCGTGGGAATGTGGATAGGGCTCTTGAACTGTTCAATGAAATGCCTCAACGAGAGCTAAATAGAAATGTGGTAACTTACACGGGGATGATCTCTGGGTTGTCCAAGTATGGCAGAGCTGATGAAGCATTTAAATTATACGATGAAATGAAAGCAGCAGGCATTGAACCTGATGATAGAATATATTCTTCCTTGACAGGGAGCCTTCATGGAGCAGGATCTTAG

Protein sequence

MKPISYPMSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRKNPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKFVHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFLRRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIERKNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVYTSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQTKGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRREDARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIEGYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNRNVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAGS

Homology

[Close]

BLAST of CcUC10G205560.1 vs. NCBI nr
Match: XP_038904125.1 (pentatricopeptide repeat-containing protein At2g32630 [Benincasa hispida])

HSP 1 Score: 1067.0 bits (2758), Expect = 5.9e-308
Identity = 528/592 (89.19%), Postives = 564/592 (95.27%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           MSNQAIA NIAKLILKSGL PFKTTPSLLSNLDSRVTQLVLSDPN+PTQSCLSFFNFLR+
Sbjct: 1   MSNQAIATNIAKLILKSGLKPFKTTPSLLSNLDSRVTQLVLSDPNIPTQSCLSFFNFLRQ 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKF 127
           NPSQKPDLRAHLILICRLYRARKFAVMKNVLN++VNDGNLRST +RI+SSIG E NEPKF
Sbjct: 61  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNFMVNDGNLRSTVERIVSSIGDEFNEPKF 120

Query: 128 VHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFL 187
           V KFCDMLFRVYVDNRMFDSALE+FDYARKSGLEIE RSCFVFLL LKRSGNVELSLEFL
Sbjct: 121 VDKFCDMLFRVYVDNRMFDSALEVFDYARKSGLEIEERSCFVFLLALKRSGNVELSLEFL 180

Query: 188 RRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIER 247
            +MVDSGVEISVYSLT VVDGLCKK EVVRAKALMDEL CKGFKPN+FTYNTLLN YIER
Sbjct: 181 TQMVDSGVEISVYSLTVVVDGLCKKREVVRAKALMDELACKGFKPNIFTYNTLLNAYIER 240

Query: 248 KNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVY 307
            +MG VNEILSLM+KDGVDYNA+TYTILIEWYSR+LKIEEAE+LF++MLKKG+EPDVYVY
Sbjct: 241 NDMGCVNEILSLMEKDGVDYNASTYTILIEWYSRNLKIEEAEELFNKMLKKGVEPDVYVY 300

Query: 308 TSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQT 367
           TSIINWNC+S NMKRAF LFD+MTERG+VPNAYTYGALING CKAG+MEAAEMLVNDMQ+
Sbjct: 301 TSIINWNCNSANMKRAFALFDDMTERGVVPNAYTYGALINGVCKAGKMEAAEMLVNDMQS 360

Query: 368 KGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRED 427
           KG+++N VIFNTLIDG+CKKGMIDEALRLQDIMQQKGFE DVFTYNIIA+GFCR NR+++
Sbjct: 361 KGIDINHVIFNTLIDGYCKKGMIDEALRLQDIMQQKGFENDVFTYNIIASGFCRLNRQDE 420

Query: 428 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 487
           ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEME+KGE PNVVTYNTFIE
Sbjct: 421 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEQKGEEPNVVTYNTFIE 480

Query: 488 GYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNR 547
           GYG KGKMEEAYKL+DEMQERGL+PDTFTYTSLINGECVRGNVDRALELFNEM ++ LNR
Sbjct: 481 GYGMKGKMEEAYKLIDEMQERGLMPDTFTYTSLINGECVRGNVDRALELFNEMSRQGLNR 540

Query: 548 NVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAGS 600
           NV+TYT MISGLSK GRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGA S
Sbjct: 541 NVITYTAMISGLSKDGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGARS 592

[Close]

BLAST of CcUC10G205560.1 vs. NCBI nr
Match: XP_023528780.1 (pentatricopeptide repeat-containing protein At2g32630 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1054.7 bits (2726), Expect = 3.0e-304
Identity = 524/592 (88.51%), Postives = 562/592 (94.93%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           M+NQA+A NIAKLI+KSGL PFKTTPSLLSNLDSRVTQLVLS+P+VPTQSCLSFFNFLR+
Sbjct: 1   MANQAMATNIAKLIVKSGLKPFKTTPSLLSNLDSRVTQLVLSNPSVPTQSCLSFFNFLRQ 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKF 127
           NPSQKPDLRAHLILICRLYRARKFAVMKNVLN+IVNDGNLRS+ +RI+SSIGGE +EPKF
Sbjct: 61  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNFIVNDGNLRSSTERIVSSIGGELSEPKF 120

Query: 128 VHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFL 187
           V KFCDMLFRVYVDN MFDSALE+FDYARK+  EIE RSC V LL LKRSGNVELSLEFL
Sbjct: 121 VDKFCDMLFRVYVDNGMFDSALEVFDYARKNRFEIEERSCLVLLLALKRSGNVELSLEFL 180

Query: 188 RRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIER 247
           R+MVDSGVEISVYSLT VVDGLC+KGEV RAKALMDELV KGFKPNVFTYNTLL  YIER
Sbjct: 181 RQMVDSGVEISVYSLTIVVDGLCRKGEVERAKALMDELVGKGFKPNVFTYNTLLKAYIER 240

Query: 248 KNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVY 307
           KNM  VNEILSLM+KDGVDYNATTYTILIEWYSRS KIEEAEK+FDEMLK+GIEPDVYVY
Sbjct: 241 KNMSCVNEILSLMEKDGVDYNATTYTILIEWYSRSGKIEEAEKVFDEMLKRGIEPDVYVY 300

Query: 308 TSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQT 367
           TSIINWNC+SGNMKRAF LFDEMTERGLVPNAYTYGALINGACKAG+MEAAEMLVNDMQ+
Sbjct: 301 TSIINWNCNSGNMKRAFALFDEMTERGLVPNAYTYGALINGACKAGEMEAAEMLVNDMQS 360

Query: 368 KGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRED 427
           KG++VNQVIFNTLIDG+CKKGM+DEALRLQDIMQQKGFEIDVFTYNIIA+GFCRSNRR++
Sbjct: 361 KGIDVNQVIFNTLIDGYCKKGMLDEALRLQDIMQQKGFEIDVFTYNIIASGFCRSNRRDE 420

Query: 428 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 487
           A+ LLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEME KG+VPNVVTYNTFI+
Sbjct: 421 AKSLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMETKGKVPNVVTYNTFID 480

Query: 488 GYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNR 547
           GYGKKGKMEEAYKL DEMQERGL+ DTFTY+SLINGECVRGN+D ALELFNEMPQR LNR
Sbjct: 481 GYGKKGKMEEAYKLRDEMQERGLMADTFTYSSLINGECVRGNLDTALELFNEMPQRGLNR 540

Query: 548 NVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAGS 600
           N++TYT +ISGLSK GR+DEAFKLYDEMKAAGIEPDDRIYSSLTGSLH AGS
Sbjct: 541 NLITYTALISGLSKDGRSDEAFKLYDEMKAAGIEPDDRIYSSLTGSLHRAGS 592

[Close]

BLAST of CcUC10G205560.1 vs. NCBI nr
Match: XP_022984086.1 (pentatricopeptide repeat-containing protein At2g32630 isoform X1 [Cucurbita maxima] >XP_022984087.1 pentatricopeptide repeat-containing protein At2g32630 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1052.4 bits (2720), Expect = 1.5e-303
Identity = 524/592 (88.51%), Postives = 561/592 (94.76%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           M+NQA+A NIAKLI+KSGL PFKTTPSLLSNLDSRVTQLVLS+P+VPTQSCLSFFNFLR+
Sbjct: 1   MANQAMATNIAKLIVKSGLKPFKTTPSLLSNLDSRVTQLVLSNPSVPTQSCLSFFNFLRQ 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKF 127
           NPSQKPDLRAHLILICRLYRARKFAVMKNVLN+IVNDGNLR T +RI+SSIGGE +EPKF
Sbjct: 61  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNFIVNDGNLRCTTERIVSSIGGELSEPKF 120

Query: 128 VHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFL 187
           V KFCDMLFRVYVDN MFDSALE+FDYARK+  EIE RSC V LL LKRSGNVELSLEFL
Sbjct: 121 VDKFCDMLFRVYVDNGMFDSALEVFDYARKNRFEIEERSCLVLLLALKRSGNVELSLEFL 180

Query: 188 RRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIER 247
           R+MVDSGVEISVYSLT VVDGLC+KGEV RAKALMDELV KGFKPNVFTYNTLLN YIER
Sbjct: 181 RQMVDSGVEISVYSLTIVVDGLCRKGEVERAKALMDELVGKGFKPNVFTYNTLLNAYIER 240

Query: 248 KNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVY 307
           KNM  VNEILSLM+KDGVDYNATTYTILIEWYSRS KIEEAEK+FDEMLK+GIEPDVYVY
Sbjct: 241 KNMSCVNEILSLMEKDGVDYNATTYTILIEWYSRSGKIEEAEKVFDEMLKRGIEPDVYVY 300

Query: 308 TSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQT 367
           TSIINWN +SGNMKRAF LFDEMTERGLVPNAYTYGALINGACKAG+MEAAEMLVNDMQ+
Sbjct: 301 TSIINWNFNSGNMKRAFALFDEMTERGLVPNAYTYGALINGACKAGEMEAAEMLVNDMQS 360

Query: 368 KGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRED 427
           KG++VNQVIFNTLIDG+CKKGM+DEALRLQDIMQQKGFEIDVFTYNIIA+GFCRSNRR++
Sbjct: 361 KGIDVNQVIFNTLIDGYCKKGMLDEALRLQDIMQQKGFEIDVFTYNIIASGFCRSNRRDE 420

Query: 428 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 487
           A+ LLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEME KG+VPNVVTYNTFI+
Sbjct: 421 AKSLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMETKGKVPNVVTYNTFID 480

Query: 488 GYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNR 547
           GYGKKGKMEEAYKL DEMQERGL+ DTFTY+SLINGECVRGN+D ALELFNEMPQR LNR
Sbjct: 481 GYGKKGKMEEAYKLRDEMQERGLMADTFTYSSLINGECVRGNLDTALELFNEMPQRGLNR 540

Query: 548 NVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAGS 600
           N++TYT +ISGLSK GR+DEAFKLYDEMKAAGIEPDDRIYSSLTGSLH AGS
Sbjct: 541 NLITYTALISGLSKDGRSDEAFKLYDEMKAAGIEPDDRIYSSLTGSLHRAGS 592

[Close]

BLAST of CcUC10G205560.1 vs. NCBI nr
Match: XP_022934560.1 (pentatricopeptide repeat-containing protein At2g32630 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1051.2 bits (2717), Expect = 3.4e-303
Identity = 522/592 (88.18%), Postives = 561/592 (94.76%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           M+NQA+A NI KLI+KSGL PFKTTPSLLSNLDSRVTQLVLS+P+VPTQSCLSFFNFLR+
Sbjct: 1   MANQAMATNIVKLIVKSGLKPFKTTPSLLSNLDSRVTQLVLSNPSVPTQSCLSFFNFLRQ 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKF 127
           NPSQKPDLRAHLILICRLYRARKFAVMKNVLN+IVNDGNLRS+ +RI+SSIGGE +EPKF
Sbjct: 61  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNFIVNDGNLRSSTERIVSSIGGELSEPKF 120

Query: 128 VHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFL 187
           V KFCDMLFRVYVDN MFDSALE+FDYARK+G EIE RSC V LL LKRSGNVELSLEFL
Sbjct: 121 VDKFCDMLFRVYVDNGMFDSALEVFDYARKNGFEIEERSCLVLLLALKRSGNVELSLEFL 180

Query: 188 RRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIER 247
           R+MVDSGVEISVYSLT VVDGLC+KGEV RAKALMDELV KGFKPNV TYNTLLN YIER
Sbjct: 181 RQMVDSGVEISVYSLTIVVDGLCRKGEVERAKALMDELVGKGFKPNVVTYNTLLNAYIER 240

Query: 248 KNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVY 307
           +NM  VNEILSLM KDGVDY+ATTYTILIEWYSRS KIEEAEK+FDEMLK+GIEPDVYVY
Sbjct: 241 RNMSCVNEILSLMVKDGVDYSATTYTILIEWYSRSGKIEEAEKVFDEMLKRGIEPDVYVY 300

Query: 308 TSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQT 367
           TSIINWNC+SGNMKRAF LFDEMTERGLVPNAYTYGALINGACKAG+MEAAEMLVNDMQ+
Sbjct: 301 TSIINWNCNSGNMKRAFALFDEMTERGLVPNAYTYGALINGACKAGEMEAAEMLVNDMQS 360

Query: 368 KGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRED 427
           KG++VNQVIFNTLIDG+CKKGM+DEALRLQDIMQQKGF+IDVFTYNIIA+GFCRSNRR++
Sbjct: 361 KGIDVNQVIFNTLIDGYCKKGMLDEALRLQDIMQQKGFKIDVFTYNIIASGFCRSNRRDE 420

Query: 428 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 487
           AR LLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEME KG+VPNVVTYNTFI+
Sbjct: 421 ARSLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMETKGKVPNVVTYNTFID 480

Query: 488 GYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNR 547
           GYGKKGKMEEAYKL DEMQERGL+ DTFTY+SLINGECVRGN+D ALELFNEMPQR LNR
Sbjct: 481 GYGKKGKMEEAYKLRDEMQERGLMADTFTYSSLINGECVRGNLDTALELFNEMPQRGLNR 540

Query: 548 NVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAGS 600
           N++TYT +ISGLSK GR+DEAFKLYDEMKAAGIEPDDRIYSSLTGSLH AGS
Sbjct: 541 NLITYTALISGLSKDGRSDEAFKLYDEMKAAGIEPDDRIYSSLTGSLHRAGS 592

[Close]

BLAST of CcUC10G205560.1 vs. NCBI nr
Match: KAG7017366.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1037.7 bits (2682), Expect = 3.9e-299
Identity = 518/593 (87.35%), Postives = 559/593 (94.27%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           M+NQA+A NIAKLI+KSGL PFKTTPSLLSNLDS VTQLVLS+P+VPTQSCLSFFNFLR+
Sbjct: 1   MANQAMATNIAKLIVKSGLKPFKTTPSLLSNLDSGVTQLVLSNPSVPTQSCLSFFNFLRQ 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSI-GGECNEPK 127
           NPSQKPDLRAHLILICRLYRARKFAVMKNVLN+IVNDGNLRS+ +RI+SSI GGE +EPK
Sbjct: 61  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNFIVNDGNLRSSTERIVSSIGGGELSEPK 120

Query: 128 FVHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEF 187
           FV KFCDMLFRVYVDN MFDSALE+FDYARK+  EIE RSC V LL LKRSGNVELSLEF
Sbjct: 121 FVDKFCDMLFRVYVDNGMFDSALEVFDYARKNRFEIEERSCLVLLLALKRSGNVELSLEF 180

Query: 188 LRRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIE 247
           LR+MVDSGVEISVYSLT VVDGLC+KGEV RAKALMDELV KGFKPNV TYNTLLN YIE
Sbjct: 181 LRQMVDSGVEISVYSLTIVVDGLCRKGEVERAKALMDELVGKGFKPNVVTYNTLLNAYIE 240

Query: 248 RKNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYV 307
           R+NM  VNEILSLM KDGVDYNATTYTILIEW+SRS KIEEAEK+FDEMLK+GIEPDVYV
Sbjct: 241 RRNMSCVNEILSLMVKDGVDYNATTYTILIEWFSRSGKIEEAEKVFDEMLKRGIEPDVYV 300

Query: 308 YTSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQ 367
           YTSIINWNC+SGNM+RAF LFDEMTERGLVPNAYTYGALINGACKAG+MEAAEMLVNDMQ
Sbjct: 301 YTSIINWNCNSGNMRRAFALFDEMTERGLVPNAYTYGALINGACKAGEMEAAEMLVNDMQ 360

Query: 368 TKGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRE 427
           +KG++VNQVIFNTLIDG+CKKGM+DEALRLQDIMQQKGFEIDVFTYNIIA+GFCRSNRR+
Sbjct: 361 SKGIDVNQVIFNTLIDGYCKKGMLDEALRLQDIMQQKGFEIDVFTYNIIASGFCRSNRRD 420

Query: 428 DARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFI 487
           +A+ LLLTMEERGVAPNAVSFSTL+DIYCKEGNFAEAKRLLKEME KG+VPNVVTYNTFI
Sbjct: 421 EAKSLLLTMEERGVAPNAVSFSTLMDIYCKEGNFAEAKRLLKEMETKGKVPNVVTYNTFI 480

Query: 488 EGYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELN 547
           +GYGKKGKMEEAYKL DEMQERGL+ DTFTY+SLINGECV GN+D ALELFNEMPQR LN
Sbjct: 481 DGYGKKGKMEEAYKLRDEMQERGLMADTFTYSSLINGECVCGNLDTALELFNEMPQRGLN 540

Query: 548 RNVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAGS 600
           RN++TYT +ISGLSK GR+DEAFKLYDEMKAAGIEPDDRIYSSLTGSLH AGS
Sbjct: 541 RNLITYTALISGLSKDGRSDEAFKLYDEMKAAGIEPDDRIYSSLTGSLHRAGS 593

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy Swiss-Prot
Match: Q8S8P6 (Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana OX=3702 GN=At2g32630 PE=3 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 1.4e-182
Identity = 318/597 (53.27%), Postives = 432/597 (72.36%), Query Frame = 0


Query: 3   PISYPMSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFF 62
           P+      +A     A L+ KS +   ++ PSLL NL+S VT+LVLS+P +PTQSC+ FF
Sbjct: 24  PVLLSSDQEAARRITACLVEKSTIGKLQSNPSLLFNLNSNVTRLVLSEPTLPTQSCIDFF 83

Query: 63  NFLRKNPSQ-KPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISS-IGG 122
             LR+  S  KPDL A + L  RLY  R+F  M+++LN +VNDG  +   + + S+ +  
Sbjct: 84  KLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDC 143

Query: 123 ECNEPK--FVHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSG 182
           + +E K  F  KF D++FRVYVDN MF+  L +FDY  K GL I+ RSC VFL+  K+  
Sbjct: 144 DISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRR 203

Query: 183 NVELSLEFLRRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYN 242
            ++L LE  RRMVDSGV+I+VYSLT VV+GLC++GEV ++K L+ E   KG KP  +TYN
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263

Query: 243 TLLNGYIERKNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKK 302
           T++N Y+++++  GV  +L +MKKDGV YN  TYT+L+E   ++ K+ +AEKLFDEM ++
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323

Query: 303 GIEPDVYVYTSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAA 362
           GIE DV+VYTS+I+WNC  GNMKRAF LFDE+TE+GL P++YTYGALI+G CK G+M AA
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383

Query: 363 EMLVNDMQTKGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANG 422
           E+L+N+MQ+KGVN+ QV+FNTLIDG+C+KGM+DEA  + D+M+QKGF+ DVFT N IA+ 
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443

Query: 423 FCRSNRREDARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPN 482
           F R  R ++A++ L  M E GV  + VS++ LID+YCKEGN  EAKRL  EM  KG  PN
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503

Query: 483 VVTYNTFIEGYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFN 542
            +TYN  I  Y K+GK++EA KL   M+  G+ PD++TYTSLI+GEC+  NVD A+ LF+
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563

Query: 543 EMPQRELNRNVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLH 596
           EM  + L++N VTYT MISGLSK G++DEAF LYDEMK  G   D+++Y++L GS+H
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.7e-77
Identity = 181/584 (30.99%), Postives = 305/584 (52.23%), Query Frame = 0


Query: 20  LILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQS----CLSFFNFLRKNPSQKPDL 79
           L+    LT  K  P  L +L +  T    S+  + +Q+     L F N+   NP Q   L
Sbjct: 23  LLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNW--ANPHQFFTL 82

Query: 80  RAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKFVHKFC--- 139
           R   I    L+   KF + K     +  D   ++  D   S +     E    +  C   
Sbjct: 83  RCKCI---TLHILTKFKLYKTA-QILAEDVAAKTLDDEYASLVFKSLQE---TYDLCYST 142

Query: 140 ----DMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLD--LKRSGNVELSLEF 199
               D++ + Y    + D AL +   A+  G  + G   +  +LD  ++   N+  +   
Sbjct: 143 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF-MPGVLSYNAVLDATIRSKRNISFAENV 202

Query: 200 LRRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIE 259
            + M++S V  +V++   ++ G C  G +  A  L D++  KG  PNV TYNTL++GY +
Sbjct: 203 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 262

Query: 260 RKNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYV 319
            + +    ++L  M   G++ N  +Y ++I    R  +++E   +  EM ++G   D   
Sbjct: 263 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 322

Query: 320 YTSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQ 379
           Y ++I   C  GN  +A  +  EM   GL P+  TY +LI+  CKAG M  A   ++ M+
Sbjct: 323 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 382

Query: 380 TKGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRE 439
            +G+  N+  + TL+DG  +KG ++EA R+   M   GF   V TYN + NG C + + E
Sbjct: 383 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 442

Query: 440 DARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFI 499
           DA  +L  M+E+G++P+ VS+ST++  +C+  +  EA R+ +EM +KG  P+ +TY++ I
Sbjct: 443 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 502

Query: 500 EGYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELN 559
           +G+ ++ + +EA  L +EM   GL PD FTYT+LIN  C+ G++++AL+L NEM ++ + 
Sbjct: 503 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 562

Query: 560 RNVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSL 591
            +VVTY+ +I+GL+K  R  EA +L  ++      P D  Y +L
Sbjct: 563 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-74
Identity = 157/472 (33.26%), Postives = 263/472 (55.72%), Query Frame = 0


Query: 121 ECNEPKFVHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLD-LKRSGN 180
           E ++ KF  +  +++   YV ++  + ++  F+    +G  + G +CF +LL  +  S +
Sbjct: 88  ETSKTKF--RLYEVIINSYVQSQSLNLSISYFNEMVDNGF-VPGSNCFNYLLTFVVGSSS 147

Query: 181 VELSLEFLRRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNT 240
                 F      S V + VYS   ++ G C+ GE+ ++  L+ EL   GF PNV  Y T
Sbjct: 148 FNQWWSFFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTT 207

Query: 241 LLNGYIERKNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKG 300
           L++G  ++  +    ++   M K G+  N  TYT+LI    ++   ++  +++++M + G
Sbjct: 208 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 267

Query: 301 IEPDVYVYTSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAE 360
           + P++Y Y  ++N  C  G  K AF +FDEM ERG+  N  TY  LI G C+  ++  A 
Sbjct: 268 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 327

Query: 361 MLVNDMQTKGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGF 420
            +V+ M++ G+N N + +NTLIDG C  G + +AL L   ++ +G    + TYNI+ +GF
Sbjct: 328 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 387

Query: 421 CRSNRREDARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNV 480
           CR      A +++  MEERG+ P+ V+++ LID + +  N  +A +L   ME+ G VP+V
Sbjct: 388 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 447

Query: 481 VTYNTFIEGYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNE 540
            TY+  I G+  KG+M EA +L   M E+   P+   Y ++I G C  G+  RAL+L  E
Sbjct: 448 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 507

Query: 541 MPQRELNRNVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLT 592
           M ++EL  NV +Y  MI  L K  ++ EA +L ++M  +GI+P   I S ++
Sbjct: 508 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy Swiss-Prot
Match: Q9ZQF1 (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g15630 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.4e-73
Identity = 173/563 (30.73%), Postives = 286/563 (50.80%), Query Frame = 0


Query: 30  KTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRKNPSQKPDLRAHLILICRLYRAR 89
           K TPSL+S         ++  PN+        FNF+      + D +   + I  + +  
Sbjct: 68  KLTPSLVST----TLLSLVKTPNLA-------FNFVNHIDLYRLDFQTQCLAIAVISKLS 127

Query: 90  KFAVMKNVLNYIVND--GNLRSTADRIISSIGGECNEPKFVHKFCDMLFRVYVDNRMFDS 149
               +  +L  +V     ++R+  D ++  +  +  E K    F D+L R     RM D 
Sbjct: 128 SPKPVTQLLKEVVTSRKNSIRNLFDELV--LAHDRLETKSTILF-DLLVRCCCQLRMVDE 187

Query: 150 ALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFLRRMVDSGVEISVYSLTTVVD 209
           A+E F   ++ G   +  +C   L  L R   +E +  F   M    ++ +VY+   +++
Sbjct: 188 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMIN 247

Query: 210 GLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIERKNMGGVNEILSLMKKDGVDY 269
            LCK+G++ +AK  +  +   G KP + TYNTL+ G+  R  + G   I+S MK  G   
Sbjct: 248 VLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 307

Query: 270 NATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVYTSIINWNCSSGNMKRAFTLF 329
           +  TY  ++ W         A ++  EM + G+ PD   Y  +I    ++G+++ AF   
Sbjct: 308 DMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYR 367

Query: 330 DEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQTKGVNVNQVIFNTLIDGHCKK 389
           DEM ++G+VP  YTY  LI+G     ++EAAE+L+ +++ KG+ ++ V +N LI+G+C+ 
Sbjct: 368 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 427

Query: 390 GMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRREDARRLLLTMEERGVAPNAVSF 449
           G   +A  L D M   G +   FTY  +    CR N+  +A  L   +  +G+ P+ V  
Sbjct: 428 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 487

Query: 450 STLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIEGYGKKGKMEEAYKLMDEMQE 509
           +TL+D +C  GN   A  LLKEM+     P+ VTYN  + G   +GK EEA +LM EM+ 
Sbjct: 488 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 547

Query: 510 RGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNRNVVTYTGMISGLSKYGRADE 569
           RG+ PD  +Y +LI+G   +G+   A  + +EM     N  ++TY  ++ GLSK    + 
Sbjct: 548 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 607

Query: 570 AFKLYDEMKAAGIEPDDRIYSSL 591
           A +L  EMK+ GI P+D  + S+
Sbjct: 608 AEELLREMKSEGIVPNDSSFCSV 613

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.6e-72
Identity = 144/453 (31.79%), Postives = 252/453 (55.63%), Query Frame = 0


Query: 146 DSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFLRRMVDSGVEISVYSLTTV 205
           D A+E+ +   K+G+  +  +    L     SG  + ++ FL++M   GVE  V + + +
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 206 VDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIERKNMGGVNEILSLMKKDGV 265
           +D LCK G  + A+ + D +  +G KP + TY TLL GY  +  +  ++ +L LM ++G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367

Query: 266 DYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVYTSIINWNCSSGNMKRAFT 325
             +   ++ILI  Y++  K+++A  +F +M ++G+ P+   Y ++I   C SG ++ A  
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 326 LFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQTKGVNVNQVIFNTLIDGHC 385
            F++M + GL P    Y +LI+G C   + E AE L+ +M  +G+ +N + FN++ID HC
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487

Query: 386 KKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRREDARRLLLTMEERGVAPNAV 445
           K+G + E+ +L ++M + G + +V TYN + NG+C + + ++A +LL  M   G+ PN V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547

Query: 446 SFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIEGYGKKGKMEEAYKLMDEM 505
           ++STLI+ YCK     +A  L KEME  G  P+++TYN  ++G  +  +   A +L   +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607

Query: 506 QERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNRNVVTYTGMISGLSKYGRA 565
            E G   +  TY  +++G C     D AL++F  +   +L     T+  MI  L K GR 
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667

Query: 566 DEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAG 599
           DEA  L+    + G+ P+   Y  +  ++ G G
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy TrEMBL
Match: A0A6J1J171 (pentatricopeptide repeat-containing protein At2g32630 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482505 PE=4 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 7.3e-304
Identity = 524/592 (88.51%), Postives = 561/592 (94.76%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           M+NQA+A NIAKLI+KSGL PFKTTPSLLSNLDSRVTQLVLS+P+VPTQSCLSFFNFLR+
Sbjct: 1   MANQAMATNIAKLIVKSGLKPFKTTPSLLSNLDSRVTQLVLSNPSVPTQSCLSFFNFLRQ 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKF 127
           NPSQKPDLRAHLILICRLYRARKFAVMKNVLN+IVNDGNLR T +RI+SSIGGE +EPKF
Sbjct: 61  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNFIVNDGNLRCTTERIVSSIGGELSEPKF 120

Query: 128 VHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFL 187
           V KFCDMLFRVYVDN MFDSALE+FDYARK+  EIE RSC V LL LKRSGNVELSLEFL
Sbjct: 121 VDKFCDMLFRVYVDNGMFDSALEVFDYARKNRFEIEERSCLVLLLALKRSGNVELSLEFL 180

Query: 188 RRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIER 247
           R+MVDSGVEISVYSLT VVDGLC+KGEV RAKALMDELV KGFKPNVFTYNTLLN YIER
Sbjct: 181 RQMVDSGVEISVYSLTIVVDGLCRKGEVERAKALMDELVGKGFKPNVFTYNTLLNAYIER 240

Query: 248 KNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVY 307
           KNM  VNEILSLM+KDGVDYNATTYTILIEWYSRS KIEEAEK+FDEMLK+GIEPDVYVY
Sbjct: 241 KNMSCVNEILSLMEKDGVDYNATTYTILIEWYSRSGKIEEAEKVFDEMLKRGIEPDVYVY 300

Query: 308 TSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQT 367
           TSIINWN +SGNMKRAF LFDEMTERGLVPNAYTYGALINGACKAG+MEAAEMLVNDMQ+
Sbjct: 301 TSIINWNFNSGNMKRAFALFDEMTERGLVPNAYTYGALINGACKAGEMEAAEMLVNDMQS 360

Query: 368 KGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRED 427
           KG++VNQVIFNTLIDG+CKKGM+DEALRLQDIMQQKGFEIDVFTYNIIA+GFCRSNRR++
Sbjct: 361 KGIDVNQVIFNTLIDGYCKKGMLDEALRLQDIMQQKGFEIDVFTYNIIASGFCRSNRRDE 420

Query: 428 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 487
           A+ LLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEME KG+VPNVVTYNTFI+
Sbjct: 421 AKSLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMETKGKVPNVVTYNTFID 480

Query: 488 GYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNR 547
           GYGKKGKMEEAYKL DEMQERGL+ DTFTY+SLINGECVRGN+D ALELFNEMPQR LNR
Sbjct: 481 GYGKKGKMEEAYKLRDEMQERGLMADTFTYSSLINGECVRGNLDTALELFNEMPQRGLNR 540

Query: 548 NVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAGS 600
           N++TYT +ISGLSK GR+DEAFKLYDEMKAAGIEPDDRIYSSLTGSLH AGS
Sbjct: 541 NLITYTALISGLSKDGRSDEAFKLYDEMKAAGIEPDDRIYSSLTGSLHRAGS 592

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy TrEMBL
Match: A0A6J1F818 (pentatricopeptide repeat-containing protein At2g32630 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441705 PE=4 SV=1)

HSP 1 Score: 1051.2 bits (2717), Expect = 1.6e-303
Identity = 522/592 (88.18%), Postives = 561/592 (94.76%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           M+NQA+A NI KLI+KSGL PFKTTPSLLSNLDSRVTQLVLS+P+VPTQSCLSFFNFLR+
Sbjct: 1   MANQAMATNIVKLIVKSGLKPFKTTPSLLSNLDSRVTQLVLSNPSVPTQSCLSFFNFLRQ 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKF 127
           NPSQKPDLRAHLILICRLYRARKFAVMKNVLN+IVNDGNLRS+ +RI+SSIGGE +EPKF
Sbjct: 61  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNFIVNDGNLRSSTERIVSSIGGELSEPKF 120

Query: 128 VHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFL 187
           V KFCDMLFRVYVDN MFDSALE+FDYARK+G EIE RSC V LL LKRSGNVELSLEFL
Sbjct: 121 VDKFCDMLFRVYVDNGMFDSALEVFDYARKNGFEIEERSCLVLLLALKRSGNVELSLEFL 180

Query: 188 RRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIER 247
           R+MVDSGVEISVYSLT VVDGLC+KGEV RAKALMDELV KGFKPNV TYNTLLN YIER
Sbjct: 181 RQMVDSGVEISVYSLTIVVDGLCRKGEVERAKALMDELVGKGFKPNVVTYNTLLNAYIER 240

Query: 248 KNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVY 307
           +NM  VNEILSLM KDGVDY+ATTYTILIEWYSRS KIEEAEK+FDEMLK+GIEPDVYVY
Sbjct: 241 RNMSCVNEILSLMVKDGVDYSATTYTILIEWYSRSGKIEEAEKVFDEMLKRGIEPDVYVY 300

Query: 308 TSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQT 367
           TSIINWNC+SGNMKRAF LFDEMTERGLVPNAYTYGALINGACKAG+MEAAEMLVNDMQ+
Sbjct: 301 TSIINWNCNSGNMKRAFALFDEMTERGLVPNAYTYGALINGACKAGEMEAAEMLVNDMQS 360

Query: 368 KGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRED 427
           KG++VNQVIFNTLIDG+CKKGM+DEALRLQDIMQQKGF+IDVFTYNIIA+GFCRSNRR++
Sbjct: 361 KGIDVNQVIFNTLIDGYCKKGMLDEALRLQDIMQQKGFKIDVFTYNIIASGFCRSNRRDE 420

Query: 428 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 487
           AR LLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEME KG+VPNVVTYNTFI+
Sbjct: 421 ARSLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMETKGKVPNVVTYNTFID 480

Query: 488 GYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNR 547
           GYGKKGKMEEAYKL DEMQERGL+ DTFTY+SLINGECVRGN+D ALELFNEMPQR LNR
Sbjct: 481 GYGKKGKMEEAYKLRDEMQERGLMADTFTYSSLINGECVRGNLDTALELFNEMPQRGLNR 540

Query: 548 NVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAGS 600
           N++TYT +ISGLSK GR+DEAFKLYDEMKAAGIEPDDRIYSSLTGSLH AGS
Sbjct: 541 NLITYTALISGLSKDGRSDEAFKLYDEMKAAGIEPDDRIYSSLTGSLHRAGS 592

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy TrEMBL
Match: A0A6J1CU39 (pentatricopeptide repeat-containing protein At2g32630 OS=Momordica charantia OX=3673 GN=LOC111014302 PE=4 SV=1)

HSP 1 Score: 1015.0 bits (2623), Expect = 1.3e-292
Identity = 505/592 (85.30%), Postives = 545/592 (92.06%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           MSNQAIA NI KLI+KSGL PFKTTPSLLSNLD+++T LVLS+PNVPTQSCLSFFNFLR 
Sbjct: 1   MSNQAIATNICKLIVKSGLKPFKTTPSLLSNLDTQITHLVLSNPNVPTQSCLSFFNFLRS 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKF 127
           NPS KPDLRAHLIL+ RLY ARKFAVMKNVLN+I ND NLRST +RI++SIG E NEPKF
Sbjct: 61  NPSHKPDLRAHLILVSRLYGARKFAVMKNVLNFIANDENLRSTTERIVASIGSEFNEPKF 120

Query: 128 VHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFL 187
           V K CDMLFRVYVDNRMFDSAL +FDYA+ +GLEIE RSCFVFLL LKRS NVELSLE L
Sbjct: 121 VDKLCDMLFRVYVDNRMFDSALGVFDYAKNNGLEIEERSCFVFLLALKRSVNVELSLELL 180

Query: 188 RRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIER 247
           R+MVDSGVEI+VYSLT V+DGLC+KG+V RAK LMDELV KG KPNVFTYNTLLN Y ER
Sbjct: 181 RKMVDSGVEITVYSLTIVIDGLCRKGDVERAKTLMDELVGKGIKPNVFTYNTLLNAYTER 240

Query: 248 KNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVY 307
           K+M  VNEILSLM+KDGVDYNA TYTILIEWYSRS KIEEAEKLFDEMLKK IEPDVYVY
Sbjct: 241 KDMCSVNEILSLMEKDGVDYNAATYTILIEWYSRSGKIEEAEKLFDEMLKKNIEPDVYVY 300

Query: 308 TSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQT 367
           TSIINWNC+SGNMKRAF LFDEMTERGLVPN+YTYGALINGACKAG MEAAE+LVNDMQ+
Sbjct: 301 TSIINWNCNSGNMKRAFALFDEMTERGLVPNSYTYGALINGACKAGLMEAAEILVNDMQS 360

Query: 368 KGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRED 427
           +G++VNQV+FNTLIDG+CKKGMIDEALRLQ+IMQQKG EIDVFTYNIIA+GFCRSNRRE+
Sbjct: 361 QGIDVNQVLFNTLIDGYCKKGMIDEALRLQEIMQQKGLEIDVFTYNIIASGFCRSNRREE 420

Query: 428 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 487
           ARRLLLTMEERGVAPNAVSFS LIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE
Sbjct: 421 ARRLLLTMEERGVAPNAVSFSILIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 480

Query: 488 GYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNR 547
           GYGKK KMEEAYKL +EMQERGL+PDTFTYTSLINGEC+RGNVD ALELFNEMPQ+ L+R
Sbjct: 481 GYGKKRKMEEAYKLKNEMQERGLMPDTFTYTSLINGECIRGNVDTALELFNEMPQQGLSR 540

Query: 548 NVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLHGAGS 600
           NVVTY  MISGLSK GRA+EAF+LYDEMKAAGI+PDDRIY SLTGSLH  GS
Sbjct: 541 NVVTYAAMISGLSKDGRANEAFRLYDEMKAAGIKPDDRIYPSLTGSLHRTGS 592

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy TrEMBL
Match: A0A6J1J9J7 (pentatricopeptide repeat-containing protein At2g32630 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482505 PE=4 SV=1)

HSP 1 Score: 986.5 bits (2549), Expect = 4.9e-284
Identity = 491/561 (87.52%), Postives = 527/561 (93.94%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           M+NQA+A NIAKLI+KSGL PFKTTPSLLSNLDSRVTQLVLS+P+VPTQSCLSFFNFLR+
Sbjct: 1   MANQAMATNIAKLIVKSGLKPFKTTPSLLSNLDSRVTQLVLSNPSVPTQSCLSFFNFLRQ 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKF 127
           NPSQKPDLRAHLILICRLYRARKFAVMKNVLN+IVNDGNLR T +RI+SSIGGE +EPKF
Sbjct: 61  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNFIVNDGNLRCTTERIVSSIGGELSEPKF 120

Query: 128 VHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFL 187
           V KFCDMLFRVYVDN MFDSALE+FDYARK+  EIE RSC V LL LKRSGNVELSLEFL
Sbjct: 121 VDKFCDMLFRVYVDNGMFDSALEVFDYARKNRFEIEERSCLVLLLALKRSGNVELSLEFL 180

Query: 188 RRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIER 247
           R+MVDSGVEISVYSLT VVDGLC+KGEV RAKALMDELV KGFKPNVFTYNTLLN YIER
Sbjct: 181 RQMVDSGVEISVYSLTIVVDGLCRKGEVERAKALMDELVGKGFKPNVFTYNTLLNAYIER 240

Query: 248 KNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVY 307
           KNM  VNEILSLM+KDGVDYNATTYTILIEWYSRS KIEEAEK+FDEMLK+GIEPDVYVY
Sbjct: 241 KNMSCVNEILSLMEKDGVDYNATTYTILIEWYSRSGKIEEAEKVFDEMLKRGIEPDVYVY 300

Query: 308 TSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQT 367
           TSIINWN +SGNMKRAF LFDEMTERGLVPNAYTYGALINGACKAG+MEAAEMLVNDMQ+
Sbjct: 301 TSIINWNFNSGNMKRAFALFDEMTERGLVPNAYTYGALINGACKAGEMEAAEMLVNDMQS 360

Query: 368 KGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRED 427
           KG++VNQVIFNTLIDG+CKKGM+DEALRLQDIMQQKGFEIDVFTYNIIA+GFCRSNRR++
Sbjct: 361 KGIDVNQVIFNTLIDGYCKKGMLDEALRLQDIMQQKGFEIDVFTYNIIASGFCRSNRRDE 420

Query: 428 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 487
           A+ LLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEME KG+VPNVVTYNTFI+
Sbjct: 421 AKSLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMETKGKVPNVVTYNTFID 480

Query: 488 GYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNR 547
           GYGKKGKMEEAYKL DEMQERGL+ DTFTY+SLINGECVRGN+D ALELFNEMPQR LNR
Sbjct: 481 GYGKKGKMEEAYKLRDEMQERGLMADTFTYSSLINGECVRGNLDTALELFNEMPQRGLNR 540

Query: 548 NVVTYTGMISGLSKYGRADEA 569
           N++TYT +ISGLSK G    A
Sbjct: 541 NLITYTALISGLSKDGSLHRA 561

[Close]

BLAST of CcUC10G205560.1 vs. ExPASy TrEMBL
Match: A0A6J1F254 (pentatricopeptide repeat-containing protein At2g32630 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441705 PE=4 SV=1)

HSP 1 Score: 985.3 bits (2546), Expect = 1.1e-283
Identity = 489/561 (87.17%), Postives = 527/561 (93.94%), Query Frame = 0


Query: 8   MSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRK 67
           M+NQA+A NI KLI+KSGL PFKTTPSLLSNLDSRVTQLVLS+P+VPTQSCLSFFNFLR+
Sbjct: 1   MANQAMATNIVKLIVKSGLKPFKTTPSLLSNLDSRVTQLVLSNPSVPTQSCLSFFNFLRQ 60

Query: 68  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKF 127
           NPSQKPDLRAHLILICRLYRARKFAVMKNVLN+IVNDGNLRS+ +RI+SSIGGE +EPKF
Sbjct: 61  NPSQKPDLRAHLILICRLYRARKFAVMKNVLNFIVNDGNLRSSTERIVSSIGGELSEPKF 120

Query: 128 VHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFL 187
           V KFCDMLFRVYVDN MFDSALE+FDYARK+G EIE RSC V LL LKRSGNVELSLEFL
Sbjct: 121 VDKFCDMLFRVYVDNGMFDSALEVFDYARKNGFEIEERSCLVLLLALKRSGNVELSLEFL 180

Query: 188 RRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIER 247
           R+MVDSGVEISVYSLT VVDGLC+KGEV RAKALMDELV KGFKPNV TYNTLLN YIER
Sbjct: 181 RQMVDSGVEISVYSLTIVVDGLCRKGEVERAKALMDELVGKGFKPNVVTYNTLLNAYIER 240

Query: 248 KNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVY 307
           +NM  VNEILSLM KDGVDY+ATTYTILIEWYSRS KIEEAEK+FDEMLK+GIEPDVYVY
Sbjct: 241 RNMSCVNEILSLMVKDGVDYSATTYTILIEWYSRSGKIEEAEKVFDEMLKRGIEPDVYVY 300

Query: 308 TSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQT 367
           TSIINWNC+SGNMKRAF LFDEMTERGLVPNAYTYGALINGACKAG+MEAAEMLVNDMQ+
Sbjct: 301 TSIINWNCNSGNMKRAFALFDEMTERGLVPNAYTYGALINGACKAGEMEAAEMLVNDMQS 360

Query: 368 KGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRED 427
           KG++VNQVIFNTLIDG+CKKGM+DEALRLQDIMQQKGF+IDVFTYNIIA+GFCRSNRR++
Sbjct: 361 KGIDVNQVIFNTLIDGYCKKGMLDEALRLQDIMQQKGFKIDVFTYNIIASGFCRSNRRDE 420

Query: 428 ARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIE 487
           AR LLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEME KG+VPNVVTYNTFI+
Sbjct: 421 ARSLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMETKGKVPNVVTYNTFID 480

Query: 488 GYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNR 547
           GYGKKGKMEEAYKL DEMQERGL+ DTFTY+SLINGECVRGN+D ALELFNEMPQR LNR
Sbjct: 481 GYGKKGKMEEAYKLRDEMQERGLMADTFTYSSLINGECVRGNLDTALELFNEMPQRGLNR 540

Query: 548 NVVTYTGMISGLSKYGRADEA 569
           N++TYT +ISGLSK G    A
Sbjct: 541 NLITYTALISGLSKDGSLHRA 561

[Close]

BLAST of CcUC10G205560.1 vs. TAIR 10
Match: AT2G32630.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 641.0 bits (1652), Expect = 9.8e-184
Identity = 318/597 (53.27%), Postives = 432/597 (72.36%), Query Frame = 0


Query: 3   PISYPMSNQAIAANIAKLILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFF 62
           P+      +A     A L+ KS +   ++ PSLL NL+S VT+LVLS+P +PTQSC+ FF
Sbjct: 24  PVLLSSDQEAARRITACLVEKSTIGKLQSNPSLLFNLNSNVTRLVLSEPTLPTQSCIDFF 83

Query: 63  NFLRKNPSQ-KPDLRAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISS-IGG 122
             LR+  S  KPDL A + L  RLY  R+F  M+++LN +VNDG  +   + + S+ +  
Sbjct: 84  KLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDC 143

Query: 123 ECNEPK--FVHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSG 182
           + +E K  F  KF D++FRVYVDN MF+  L +FDY  K GL I+ RSC VFL+  K+  
Sbjct: 144 DISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRR 203

Query: 183 NVELSLEFLRRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYN 242
            ++L LE  RRMVDSGV+I+VYSLT VV+GLC++GEV ++K L+ E   KG KP  +TYN
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263

Query: 243 TLLNGYIERKNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKK 302
           T++N Y+++++  GV  +L +MKKDGV YN  TYT+L+E   ++ K+ +AEKLFDEM ++
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323

Query: 303 GIEPDVYVYTSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAA 362
           GIE DV+VYTS+I+WNC  GNMKRAF LFDE+TE+GL P++YTYGALI+G CK G+M AA
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383

Query: 363 EMLVNDMQTKGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANG 422
           E+L+N+MQ+KGVN+ QV+FNTLIDG+C+KGM+DEA  + D+M+QKGF+ DVFT N IA+ 
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443

Query: 423 FCRSNRREDARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPN 482
           F R  R ++A++ L  M E GV  + VS++ LID+YCKEGN  EAKRL  EM  KG  PN
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503

Query: 483 VVTYNTFIEGYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFN 542
            +TYN  I  Y K+GK++EA KL   M+  G+ PD++TYTSLI+GEC+  NVD A+ LF+
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563

Query: 543 EMPQRELNRNVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLTGSLH 596
           EM  + L++N VTYT MISGLSK G++DEAF LYDEMK  G   D+++Y++L GS+H
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620

[Close]

BLAST of CcUC10G205560.1 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 291.2 bits (744), Expect = 1.9e-78
Identity = 181/584 (30.99%), Postives = 305/584 (52.23%), Query Frame = 0


Query: 20  LILKSGLTPFKTTPSLLSNLDSRVTQLVLSDPNVPTQS----CLSFFNFLRKNPSQKPDL 79
           L+    LT  K  P  L +L +  T    S+  + +Q+     L F N+   NP Q   L
Sbjct: 23  LLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNW--ANPHQFFTL 82

Query: 80  RAHLILICRLYRARKFAVMKNVLNYIVNDGNLRSTADRIISSIGGECNEPKFVHKFC--- 139
           R   I    L+   KF + K     +  D   ++  D   S +     E    +  C   
Sbjct: 83  RCKCI---TLHILTKFKLYKTA-QILAEDVAAKTLDDEYASLVFKSLQE---TYDLCYST 142

Query: 140 ----DMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLD--LKRSGNVELSLEF 199
               D++ + Y    + D AL +   A+  G  + G   +  +LD  ++   N+  +   
Sbjct: 143 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF-MPGVLSYNAVLDATIRSKRNISFAENV 202

Query: 200 LRRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIE 259
            + M++S V  +V++   ++ G C  G +  A  L D++  KG  PNV TYNTL++GY +
Sbjct: 203 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 262

Query: 260 RKNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYV 319
            + +    ++L  M   G++ N  +Y ++I    R  +++E   +  EM ++G   D   
Sbjct: 263 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 322

Query: 320 YTSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQ 379
           Y ++I   C  GN  +A  +  EM   GL P+  TY +LI+  CKAG M  A   ++ M+
Sbjct: 323 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 382

Query: 380 TKGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRRE 439
            +G+  N+  + TL+DG  +KG ++EA R+   M   GF   V TYN + NG C + + E
Sbjct: 383 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 442

Query: 440 DARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFI 499
           DA  +L  M+E+G++P+ VS+ST++  +C+  +  EA R+ +EM +KG  P+ +TY++ I
Sbjct: 443 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 502

Query: 500 EGYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELN 559
           +G+ ++ + +EA  L +EM   GL PD FTYT+LIN  C+ G++++AL+L NEM ++ + 
Sbjct: 503 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 562

Query: 560 RNVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSL 591
            +VVTY+ +I+GL+K  R  EA +L  ++      P D  Y +L
Sbjct: 563 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596

[Close]

BLAST of CcUC10G205560.1 vs. TAIR 10
Match: AT4G11690.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 8.8e-76
Identity = 157/472 (33.26%), Postives = 263/472 (55.72%), Query Frame = 0


Query: 121 ECNEPKFVHKFCDMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLD-LKRSGN 180
           E ++ KF  +  +++   YV ++  + ++  F+    +G  + G +CF +LL  +  S +
Sbjct: 88  ETSKTKF--RLYEVIINSYVQSQSLNLSISYFNEMVDNGF-VPGSNCFNYLLTFVVGSSS 147

Query: 181 VELSLEFLRRMVDSGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNT 240
                 F      S V + VYS   ++ G C+ GE+ ++  L+ EL   GF PNV  Y T
Sbjct: 148 FNQWWSFFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTT 207

Query: 241 LLNGYIERKNMGGVNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKG 300
           L++G  ++  +    ++   M K G+  N  TYT+LI    ++   ++  +++++M + G
Sbjct: 208 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 267

Query: 301 IEPDVYVYTSIINWNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAE 360
           + P++Y Y  ++N  C  G  K AF +FDEM ERG+  N  TY  LI G C+  ++  A 
Sbjct: 268 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 327

Query: 361 MLVNDMQTKGVNVNQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGF 420
            +V+ M++ G+N N + +NTLIDG C  G + +AL L   ++ +G    + TYNI+ +GF
Sbjct: 328 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 387

Query: 421 CRSNRREDARRLLLTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNV 480
           CR      A +++  MEERG+ P+ V+++ LID + +  N  +A +L   ME+ G VP+V
Sbjct: 388 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 447

Query: 481 VTYNTFIEGYGKKGKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNE 540
            TY+  I G+  KG+M EA +L   M E+   P+   Y ++I G C  G+  RAL+L  E
Sbjct: 448 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 507

Query: 541 MPQRELNRNVVTYTGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSLT 592
           M ++EL  NV +Y  MI  L K  ++ EA +L ++M  +GI+P   I S ++
Sbjct: 508 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555

[Close]

BLAST of CcUC10G205560.1 vs. TAIR 10
Match: AT2G15630.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 9.8e-75
Identity = 173/563 (30.73%), Postives = 286/563 (50.80%), Query Frame = 0


Query: 30  KTTPSLLSNLDSRVTQLVLSDPNVPTQSCLSFFNFLRKNPSQKPDLRAHLILICRLYRAR 89
           K TPSL+S         ++  PN+        FNF+      + D +   + I  + +  
Sbjct: 68  KLTPSLVST----TLLSLVKTPNLA-------FNFVNHIDLYRLDFQTQCLAIAVISKLS 127

Query: 90  KFAVMKNVLNYIVND--GNLRSTADRIISSIGGECNEPKFVHKFCDMLFRVYVDNRMFDS 149
               +  +L  +V     ++R+  D ++  +  +  E K    F D+L R     RM D 
Sbjct: 128 SPKPVTQLLKEVVTSRKNSIRNLFDELV--LAHDRLETKSTILF-DLLVRCCCQLRMVDE 187

Query: 150 ALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFLRRMVDSGVEISVYSLTTVVD 209
           A+E F   ++ G   +  +C   L  L R   +E +  F   M    ++ +VY+   +++
Sbjct: 188 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMIN 247

Query: 210 GLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIERKNMGGVNEILSLMKKDGVDY 269
            LCK+G++ +AK  +  +   G KP + TYNTL+ G+  R  + G   I+S MK  G   
Sbjct: 248 VLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 307

Query: 270 NATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVYTSIINWNCSSGNMKRAFTLF 329
           +  TY  ++ W         A ++  EM + G+ PD   Y  +I    ++G+++ AF   
Sbjct: 308 DMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYR 367

Query: 330 DEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQTKGVNVNQVIFNTLIDGHCKK 389
           DEM ++G+VP  YTY  LI+G     ++EAAE+L+ +++ KG+ ++ V +N LI+G+C+ 
Sbjct: 368 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 427

Query: 390 GMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRREDARRLLLTMEERGVAPNAVSF 449
           G   +A  L D M   G +   FTY  +    CR N+  +A  L   +  +G+ P+ V  
Sbjct: 428 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 487

Query: 450 STLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIEGYGKKGKMEEAYKLMDEMQE 509
           +TL+D +C  GN   A  LLKEM+     P+ VTYN  + G   +GK EEA +LM EM+ 
Sbjct: 488 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 547

Query: 510 RGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNRNVVTYTGMISGLSKYGRADE 569
           RG+ PD  +Y +LI+G   +G+   A  + +EM     N  ++TY  ++ GLSK    + 
Sbjct: 548 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 607

Query: 570 AFKLYDEMKAAGIEPDDRIYSSL 591
           A +L  EMK+ GI P+D  + S+
Sbjct: 608 AEELLREMKSEGIVPNDSSFCSV 613

[Close]

BLAST of CcUC10G205560.1 vs. TAIR 10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 271.6 bits (693), Expect = 1.6e-72
Identity = 143/458 (31.22%), Postives = 249/458 (54.37%), Query Frame = 0


Query: 133 DMLFRVYVDNRMFDSALELFDYARKSGLEIEGRSCFVFLLDLKRSGNVELSLEFLRRMVD 192
           D+L R YV  R    A E F   R  G  +   +C   +  L R G VEL+    + +  
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228

Query: 193 SGVEISVYSLTTVVDGLCKKGEVVRAKALMDELVCKGFKPNVFTYNTLLNGYIERKNMGG 252
           SGV I+VY+L  +V+ LCK G++ +    + ++  KG  P++ TYNTL++ Y  +  M  
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288

Query: 253 VNEILSLMKKDGVDYNATTYTILIEWYSRSLKIEEAEKLFDEMLKKGIEPDVYVYTSIIN 312
             E+++ M   G      TY  +I    +  K E A+++F EML+ G+ PD   Y S++ 
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348

Query: 313 WNCSSGNMKRAFTLFDEMTERGLVPNAYTYGALINGACKAGQMEAAEMLVNDMQTKGVNV 372
             C  G++     +F +M  R +VP+   + ++++   ++G ++ A M  N ++  G+  
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408

Query: 373 NQVIFNTLIDGHCKKGMIDEALRLQDIMQQKGFEIDVFTYNIIANGFCRSNRREDARRLL 432
           + VI+  LI G+C+KGMI  A+ L++ M Q+G  +DV TYN I +G C+     +A +L 
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468

Query: 433 LTMEERGVAPNAVSFSTLIDIYCKEGNFAEAKRLLKEMEKKGEVPNVVTYNTFIEGYGKK 492
             M ER + P++ + + LID +CK GN   A  L ++M++K    +VVTYNT ++G+GK 
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528

Query: 493 GKMEEAYKLMDEMQERGLIPDTFTYTSLINGECVRGNVDRALELFNEMPQRELNRNVVTY 552
           G ++ A ++  +M  + ++P   +Y+ L+N  C +G++  A  +++EM  + +   V+  
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588

Query: 553 TGMISGLSKYGRADEAFKLYDEMKAAGIEPDDRIYSSL 591
             MI G  + G A +     ++M + G  PD   Y++L
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626

The following BLAST results are available for this feature:

BLAST of CcUC10G205560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904125.1	5.9e-308	89.19	pentatricopeptide repeat-containing protein At2g32630 [Benincasa hispida]	[more]
XP_023528780.1	3.0e-304	88.51	pentatricopeptide repeat-containing protein At2g32630 [Cucurbita pepo subsp. pep...	[more]
XP_022984086.1	1.5e-303	88.51	pentatricopeptide repeat-containing protein At2g32630 isoform X1 [Cucurbita maxi...	[more]
XP_022934560.1	3.4e-303	88.18	pentatricopeptide repeat-containing protein At2g32630 isoform X1 [Cucurbita mosc...	[more]
KAG7017366.1	3.9e-299	87.35	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of CcUC10G205560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8P6	1.4e-182	53.27	Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	2.7e-77	30.99	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9T0D6	1.2e-74	33.26	Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX...	[more]
Q9ZQF1	1.4e-73	30.73	Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidop...	[more]
Q76C99	2.6e-72	31.79	Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV...	[more]

BLAST of CcUC10G205560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J171	7.3e-304	88.51	pentatricopeptide repeat-containing protein At2g32630 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1F818	1.6e-303	88.18	pentatricopeptide repeat-containing protein At2g32630 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1CU39	1.3e-292	85.30	pentatricopeptide repeat-containing protein At2g32630 OS=Momordica charantia OX=...	[more]
A0A6J1J9J7	4.9e-284	87.52	pentatricopeptide repeat-containing protein At2g32630 isoform X2 OS=Cucurbita ma...	[more]
A0A6J1F254	1.1e-283	87.17	pentatricopeptide repeat-containing protein At2g32630 isoform X2 OS=Cucurbita mo...	[more]

BLAST of CcUC10G205560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32630.1	9.8e-184	53.27	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G39710.1	1.9e-78	30.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G11690.1	8.8e-76	33.26	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT2G15630.1	9.8e-75	30.73	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G01110.1	1.6e-72	31.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 302..351 e-value: 8.2E-16 score: 58.0 coord: 547..590 e-value: 2.3E-12 score: 46.9 coord: 477..525 e-value: 1.5E-20 score: 73.2 coord: 373..421 e-value: 2.2E-16 score: 59.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 221..279 e-value: 1.1E-11 score: 44.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 135..159 e-value: 0.89 score: 10.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 375..409 e-value: 3.2E-8 score: 31.2 coord: 305..339 e-value: 4.0E-7 score: 27.8 coord: 340..373 e-value: 8.5E-8 score: 29.9 coord: 515..545 e-value: 2.1E-5 score: 22.4 coord: 445..479 e-value: 6.2E-10 score: 36.6 coord: 480..514 e-value: 1.5E-11 score: 41.7 coord: 550..583 e-value: 4.5E-11 score: 40.2 coord: 410..444 e-value: 2.9E-7 score: 28.2 coord: 271..304 e-value: 1.9E-9 score: 35.1 coord: 235..268 e-value: 8.0E-5 score: 20.6 coord: 201..234 e-value: 3.4E-6 score: 24.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 438..471 e-value: 3.1E-11 score: 42.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 338..372 score: 11.23539
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 478..512 score: 14.556664
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 548..582 score: 13.833219
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 233..267 score: 9.525427
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 303..337 score: 11.860184
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 373..407 score: 11.958836
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 443..477 score: 13.230347
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 268..302 score: 13.08785
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 513..547 score: 11.125777
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 198..232 score: 10.325603
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 408..442 score: 12.660359
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 282..390 e-value: 1.1E-36 score: 127.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 132..281 e-value: 2.0E-28 score: 101.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 473..543 e-value: 4.0E-24 score: 87.2 coord: 416..472 e-value: 6.9E-15 score: 57.0 coord: 544..599 e-value: 5.7E-12 score: 47.5
None	No IPR available	PANTHER	PTHR47934:SF2	OS07G0671200 PROTEIN	coord: 78..596
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 78..596
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 284..581

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G205560	CcUC10G205560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G205560.1-exon	CcUC10G205560.1-exon-CicolChr10:32746827..32748626	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G205560.1-cds	CcUC10G205560.1-cds-CicolChr10:32746827..32748626	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G205560.1	CcUC10G205560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding