CcUC10G203020.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G203020.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	zinc finger protein 8-like
Location	CicolChr10: 30286685 .. 30287524 (+)
Sequence length	840
RNA-Seq Expression	CcUC10G203020.1
Synteny	CcUC10G203020.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAAGAGTACCAGTGAACGAGAGACTCATGATTTCATGAACGTTGAGTCCTTCTCTCAACTTCCCTTCATCCGTCCTGCACCAAACGAAAAGGGTATTAGGCTTTTCGGAATAGAATTCGGAAGTCGAAACGCTGCCGTAGCTGCCTCCGCTTCCTCCGCTGAGGAGTCGGAATCCGGTGAGACTATTATTGCATGCGAAGATGCGAAAGAAAACAATAGCGACAACAACAATAATGGTGGAGAGAGTAGTCGGAGATTTGAATGTCATTATTGTTGTAGAAATTTCCCTACTTCTCAAGCCTTGGGAGGCCACCAAAATGCTCACAAACGAGAGCGCCAACATGCAAAAAGGGCTCACCTTCAGTCTAATGCAGCCGCTATGGTTCATGGAATTGGAGCCTTCTCAGATGCGGCTCATGTCTATGGGCTCGTGAACTACCAACGCCTAGGCGCCACTCCTTCTAGCCTTCAGATTAATAATTACCCTTCTTGGAATAGAAATTCACCTGCCACGGCTGCTGCCTCCACGAGATTTTACGGTAGCCCTAGTGGGCAGTATTCTCCGGTAGCGGCCGCAACGCCTATAAACGGGAGCCCGTTGGCGATGTGGAGAATCTCGGCCGTTCAAAATAATAATGTACCGTCGTTTGGTGGTCGGGAGCGGTCGTCTCTGCACCCTTTGCCGCTGTTTTCCGGAGATGAGATGGTGAAAGGCGGCAGCGGTGGCGGTGGCACTGCTGTGAGTGGTGGTGGGTCTGGCGGGACTCATCAGACCAGCCGGTTTGTTTACGAGGCAAAAACGGCGGACCAAGTGAGTTTGGATCTTCATCTGTAA

mRNA sequence

ATGGACAAGAGTACCAGTGAACGAGAGACTCATGATTTCATGAACGTTGAGTCCTTCTCTCAACTTCCCTTCATCCGTCCTGCACCAAACGAAAAGGGTATTAGGCTTTTCGGAATAGAATTCGGAAGTCGAAACGCTGCCGTAGCTGCCTCCGCTTCCTCCGCTGAGGAGTCGGAATCCGGTGAGACTATTATTGCATGCGAAGATGCGAAAGAAAACAATAGCGACAACAACAATAATGGTGGAGAGAGTAGTCGGAGATTTGAATGTCATTATTGTTGTAGAAATTTCCCTACTTCTCAAGCCTTGGGAGGCCACCAAAATGCTCACAAACGAGAGCGCCAACATGCAAAAAGGGCTCACCTTCAGTCTAATGCAGCCGCTATGGTTCATGGAATTGGAGCCTTCTCAGATGCGGCTCATGTCTATGGGCTCGTGAACTACCAACGCCTAGGCGCCACTCCTTCTAGCCTTCAGATTAATAATTACCCTTCTTGGAATAGAAATTCACCTGCCACGGCTGCTGCCTCCACGAGATTTTACGGTAGCCCTAGTGGGCAGTATTCTCCGGTAGCGGCCGCAACGCCTATAAACGGGAGCCCGTTGGCGATGTGGAGAATCTCGGCCGTTCAAAATAATAATGTACCGTCGTTTGGTGGTCGGGAGCGGTCGTCTCTGCACCCTTTGCCGCTGTTTTCCGGAGATGAGATGGTGAAAGGCGGCAGCGGTGGCGGTGGCACTGCTGTGAGTGGTGGTGGGTCTGGCGGGACTCATCAGACCAGCCGGTTTGTTTACGAGGCAAAAACGGCGGACCAAGTGAGTTTGGATCTTCATCTGTAA

Coding sequence (CDS)

ATGGACAAGAGTACCAGTGAACGAGAGACTCATGATTTCATGAACGTTGAGTCCTTCTCTCAACTTCCCTTCATCCGTCCTGCACCAAACGAAAAGGGTATTAGGCTTTTCGGAATAGAATTCGGAAGTCGAAACGCTGCCGTAGCTGCCTCCGCTTCCTCCGCTGAGGAGTCGGAATCCGGTGAGACTATTATTGCATGCGAAGATGCGAAAGAAAACAATAGCGACAACAACAATAATGGTGGAGAGAGTAGTCGGAGATTTGAATGTCATTATTGTTGTAGAAATTTCCCTACTTCTCAAGCCTTGGGAGGCCACCAAAATGCTCACAAACGAGAGCGCCAACATGCAAAAAGGGCTCACCTTCAGTCTAATGCAGCCGCTATGGTTCATGGAATTGGAGCCTTCTCAGATGCGGCTCATGTCTATGGGCTCGTGAACTACCAACGCCTAGGCGCCACTCCTTCTAGCCTTCAGATTAATAATTACCCTTCTTGGAATAGAAATTCACCTGCCACGGCTGCTGCCTCCACGAGATTTTACGGTAGCCCTAGTGGGCAGTATTCTCCGGTAGCGGCCGCAACGCCTATAAACGGGAGCCCGTTGGCGATGTGGAGAATCTCGGCCGTTCAAAATAATAATGTACCGTCGTTTGGTGGTCGGGAGCGGTCGTCTCTGCACCCTTTGCCGCTGTTTTCCGGAGATGAGATGGTGAAAGGCGGCAGCGGTGGCGGTGGCACTGCTGTGAGTGGTGGTGGGTCTGGCGGGACTCATCAGACCAGCCGGTTTGTTTACGAGGCAAAAACGGCGGACCAAGTGAGTTTGGATCTTCATCTGTAA

Protein sequence

MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESESGETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSPATAAASTRFYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVPSFGGRERSSLHPLPLFSGDEMVKGGSGGGGTAVSGGGSGGTHQTSRFVYEAKTADQVSLDLHL

Homology

[Close]

BLAST of CcUC10G203020.1 vs. NCBI nr
Match: XP_038906200.1 (zinc finger protein 8-like [Benincasa hispida])

HSP 1 Score: 473.0 bits (1216), Expect = 1.8e-129
Identity = 246/273 (90.11%), Postives = 253/273 (92.67%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKSTSERETHDFMNVESFSQLPFIRP P EKGIRLFGIEFGSRN     SASS EESES
Sbjct: 1   MDKSTSERETHDFMNVESFSQLPFIRPTPKEKGIRLFGIEFGSRN----VSASSVEESES 60

Query: 61  GETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120
           GETIIACEDAKENN  +NNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA
Sbjct: 61  GETIIACEDAKENN--DNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120

Query: 121 HLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSPATAAASTRF 180
           HLQSNA AMVHGIGAFSDAAHVYGL+NYQRLGATPSSLQINNYPSWNRNSPA AAA  RF
Sbjct: 121 HLQSNATAMVHGIGAFSDAAHVYGLMNYQRLGATPSSLQINNYPSWNRNSPAAAAA--RF 180

Query: 181 YGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVPSFGGRERSSLHPLPLFSGDEMVKG 240
           YGSP GQYSP AAATPINGSPLAMWRISAVQNNNVPSFGGRERSSLHPLP+FSGDEM+KG
Sbjct: 181 YGSPGGQYSPTAAATPINGSPLAMWRISAVQNNNVPSFGGRERSSLHPLPMFSGDEMMKG 240

Query: 241 GSGGGGTAVSGGGSGGTHQTSRFVYEAKTADQV 274
           GS GGGT V+GGGS G+HQT RFVYEAKTADQ+
Sbjct: 241 GS-GGGTTVTGGGSDGSHQTGRFVYEAKTADQL 264

[Close]

BLAST of CcUC10G203020.1 vs. NCBI nr
Match: XP_008443018.1 (PREDICTED: zinc finger protein 8-like [Cucumis melo] >KAA0043753.1 zinc finger protein 8-like [Cucumis melo var. makuwa] >TYK25380.1 zinc finger protein 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 472.2 bits (1214), Expect = 3.0e-129
Identity = 250/284 (88.03%), Postives = 258/284 (90.85%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKSTSERETHDFMNVESFSQLPFIRPAP EKGIRLFGIEFGSRNAA   SASS EESES
Sbjct: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSRNAA-TVSASSIEESES 60

Query: 61  GETIIACEDAKENNSD-NNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120
           GET+IACEDAKENN+D NNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR
Sbjct: 61  GETVIACEDAKENNNDGNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120

Query: 121 AHLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSP---ATAAA 180
           AHLQSNAAAMVHGIG FSDAAHVYGL+NYQRLGAT     +NNYPSWNRNSP   A AAA
Sbjct: 121 AHLQSNAAAMVHGIGPFSDAAHVYGLMNYQRLGAT----HLNNYPSWNRNSPAATAAAAA 180

Query: 181 STRFYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVP-SFGGRERSSLHPLPLFSGD 240
           +TRFYGS  GQYS  A ATPINGSPLAMWRISAVQN+NVP SFGGRERSSLHPLPLFSGD
Sbjct: 181 ATRFYGSSGGQYSSAATATPINGSPLAMWRISAVQNSNVPSSFGGRERSSLHPLPLFSGD 240

Query: 241 EMVKGGSGGGGTAVSGGGSGGTHQTSRFVYEAKTADQVSLDLHL 280
           EM+KG  GGGGTAVS GGSGG+HQT RFVYEAKTADQVSLDLHL
Sbjct: 241 EMMKGAGGGGGTAVSAGGSGGSHQTGRFVYEAKTADQVSLDLHL 279

[Close]

BLAST of CcUC10G203020.1 vs. NCBI nr
Match: XP_004136728.3 (zinc finger protein 8 [Cucumis sativus] >KGN59419.2 hypothetical protein Csa_001270 [Cucumis sativus])

HSP 1 Score: 470.7 bits (1210), Expect = 8.8e-129
Identity = 249/283 (87.99%), Postives = 258/283 (91.17%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKSTSERETHDFMNVESFSQLPFIRPAP EKGIRLFGIEFGSRNAA   SASS EESES
Sbjct: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSRNAA-TVSASSIEESES 60

Query: 61  GETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120
           GETIIACEDAKENN+D NNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA
Sbjct: 61  GETIIACEDAKENNND-NNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120

Query: 121 HLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSP---ATAAAS 180
           HLQSNAAAMVHGIG FSDAAHVYGL+NYQRLGAT     INNYPSWNRNSP   A AAA+
Sbjct: 121 HLQSNAAAMVHGIGPFSDAAHVYGLMNYQRLGAT----HINNYPSWNRNSPAATAAAAAA 180

Query: 181 TRFYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVP-SFGGRERSSLHPLPLFSGDE 240
           TRFYGS  GQYS  A ATPINGSPLAMWRISAVQN+N+P SFGGRERSS+HPLPLFSGD+
Sbjct: 181 TRFYGSSGGQYSSAATATPINGSPLAMWRISAVQNSNLPSSFGGRERSSIHPLPLFSGDD 240

Query: 241 MVKGGSGGGGTAVSGGGSGGTHQTSRFVYEAKTADQVSLDLHL 280
           M+KG  GGGGTAVSGGGSGG+HQT RFVYEAKTADQVSLDLHL
Sbjct: 241 MMKGAGGGGGTAVSGGGSGGSHQTGRFVYEAKTADQVSLDLHL 277

[Close]

BLAST of CcUC10G203020.1 vs. NCBI nr
Match: XP_022934297.1 (zinc finger protein GIS2-like [Cucurbita moschata])

HSP 1 Score: 455.7 bits (1171), Expect = 2.9e-124
Identity = 242/282 (85.82%), Postives = 254/282 (90.07%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKS  ERETHDFMNVESFSQLPFIRPAP EKGIRLFGIEFGS+N  VAASASS EESES
Sbjct: 1   MDKSNPERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSQN-VVAASASSIEESES 60

Query: 61  GETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120
            +T+IACEDAKENN+DNNN+GGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA
Sbjct: 61  DDTVIACEDAKENNNDNNNSGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120

Query: 121 HLQSNAAAMVHGIGAFSDAAHVYGLVNYQRL-GATPSSLQINNYPSWNRNSPATAAAS-T 180
           HLQSNAAAMVHGIGAFSDAAHVYGL+NYQRL GA PS LQ+NNYPSWNRNSP  A AS T
Sbjct: 121 HLQSNAAAMVHGIGAFSDAAHVYGLMNYQRLAGAAPSGLQVNNYPSWNRNSPTAATASAT 180

Query: 181 RFYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVPSFGGRERSSLHPLPLFSGDEMV 240
           RFYGSP GQYSP A   PINGSPLAMWRISAVQ NNVP+FG RER+S+HPLPLFSGDEM+
Sbjct: 181 RFYGSPGGQYSPAATTAPINGSPLAMWRISAVQ-NNVPAFGSRERTSMHPLPLFSGDEMM 240

Query: 241 KGGSGGGGTAVSGGGSGGTHQTSRFVYEAKT-ADQVSLDLHL 280
           KGGS    TAV GGGSGG+HQT RFVYEAKT ADQVSLDLHL
Sbjct: 241 KGGS----TAVGGGGSGGSHQT-RFVYEAKTAADQVSLDLHL 275

[Close]

BLAST of CcUC10G203020.1 vs. NCBI nr
Match: XP_022983069.1 (zinc finger protein 8-like [Cucurbita maxima])

HSP 1 Score: 451.4 bits (1160), Expect = 5.5e-123
Identity = 241/281 (85.77%), Postives = 254/281 (90.39%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKS SERETHDFMNVESFSQLPFIRPAP EKGIRLFGIEFGS+N  VAASASS EESES
Sbjct: 1   MDKSNSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSQN-VVAASASSIEESES 60

Query: 61  GETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120
             T+IACEDAKENN D+NN+GGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA
Sbjct: 61  DYTVIACEDAKENN-DDNNSGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120

Query: 121 HLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSP-ATAAASTR 180
           HLQSNAAAMVHGIGAFSDAAHVYGL+NYQRLGA PS LQ+NNYPSWNRNSP A+ A++TR
Sbjct: 121 HLQSNAAAMVHGIGAFSDAAHVYGLMNYQRLGAAPSGLQVNNYPSWNRNSPTASTASATR 180

Query: 181 FYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVPSFGGRERSSLHPLPLFSGDEMVK 240
           FYGSP GQYSP A   PINGSPLAMWRISAVQ NNVP+ G RERSS+HPLPLFSGDEM+K
Sbjct: 181 FYGSPGGQYSPAATTAPINGSPLAMWRISAVQ-NNVPALGSRERSSMHPLPLFSGDEMMK 240

Query: 241 GGSGGGGTAVSGGGSGGTHQTSRFVYEAKT-ADQVSLDLHL 280
           GGS    TAV GGGSGG+HQT RFVYEAKT ADQVSLDLHL
Sbjct: 241 GGS----TAVVGGGSGGSHQT-RFVYEAKTAADQVSLDLHL 273

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-29
Identity = 113/292 (38.70%), Postives = 147/292 (50.34%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIR--PAPNEKGIRLFGIEFGSRNAAVAASASSAEES 60
           MD++T E ET DFMNVESFSQLPFIR     N K IR+FG +F  R+ ++  +    + +
Sbjct: 1   MDEATGETETQDFMNVESFSQLPFIRRPKDKNPKPIRVFGKDFTGRDFSI--TTGQEDYT 60

Query: 61  ESGETIIACEDAKENNSDNN---NNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQ 120
           +  +T    E+ +E+ + +N   NN    +RRFECHYC RNFPTSQALGGHQNAHKRERQ
Sbjct: 61  DPYQTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQ 120

Query: 121 HAKRAHLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSPATAA 180
            AKR            G+ ++           +      P S +  +YPSW  N P TAA
Sbjct: 121 LAKR------------GVSSY-----------FYHPDNNPYSYR--HYPSWT-NGPLTAA 180

Query: 181 ASTRFYGS---PSGQYSPVAAATPINGSPLAMW----RISAVQNNNVP-SFGGRERSSLH 240
            S   + S   PSG Y+      P  GS L +W    R+  V N+N   +  G   SS  
Sbjct: 181 RSYGGFSSGPKPSGYYT-----RPSYGSQLGLWRLPPRVQGVYNSNAAFTSNGSSSSSNS 240

Query: 241 PLPLFSGDEMVKGGSGGGGTAVSGGGSGGTHQTSRFVYEAKTADQVSLDLHL 280
            LPL +  +       GG  A +   S G      +       D VSLDLHL
Sbjct: 241 TLPLLTRSQTQLSSQVGGSAAQNRMSSYG------YGLSPNVQDHVSLDLHL 253

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.2e-29
Identity = 99/227 (43.61%), Postives = 124/227 (54.63%), Query Frame = 0


Query: 1   MDKSTSERETHDFM--NVESFSQLPFI-RPAPNEKG--IRLFGIEF-GSRNAAVAASAS- 60
           MD++   RETHDFM  NVESFSQLPFI R  P EK   IRLFG E  G  +  ++A  S 
Sbjct: 1   MDETNGRRETHDFMNVNVESFSQLPFIRRTPPKEKAAIIRLFGQELVGDNSDNLSAEPSD 60

Query: 61  ---SAEESESGETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAH 120
              + +  ES E I   +  K+ + D +NN   ++RRFECHYC RNFPTSQALGGHQNAH
Sbjct: 61  HQTTTKNDESSENIKDKDKEKDKDKDKDNN---NNRRFECHYCFRNFPTSQALGGHQNAH 120

Query: 121 KRERQHAKRAHLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWN--- 180
           KRERQHAKR  + S     +H      D  H+YG +N         +    +YPSW    
Sbjct: 121 KRERQHAKRGSMTS----YLHHHQP-HDPHHIYGFLN---------NHHHRHYPSWTTEA 180

Query: 181 RNSPATAAASTRFYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNN 215
           R+        T  Y S +    P +    INGSPL +WR+    + N
Sbjct: 181 RSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPLGLWRVPPSTSTN 210

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.8e-21
Identity = 65/125 (52.00%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 9   ETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESESGETIIACE 68
           +T+DFMNV SFS        P E+ IRLFG EFG          +S EESES        
Sbjct: 2   KTYDFMNVNSFS--------PKERPIRLFGFEFG----------ASHEESES-------- 61

Query: 69  DAKENNSDNNNN--GGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSNA 128
             K+N ++NN +       +RF+CHYC RNFPTSQALGGHQNAHKRERQ  KR +L SNA
Sbjct: 62  --KDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHSNA 98

Query: 129 AAMVH 132
           AA  H
Sbjct: 122 AAFFH 98

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.5e-11
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 81  GGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQS--NAAAMVHGIGAFS 138
           GG   R++EC YCCR F  SQALGGHQNAHK+ERQ  KRA LQ+  NAAA     G+ S
Sbjct: 66  GGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSAS 124

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.2e-09
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 79  NNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHL 123
           +  G  SR++EC YCCR F  SQALGGHQNAHK+ERQ  KRA +
Sbjct: 32  SGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQM 75

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy TrEMBL
Match: A0A5A7TJW6 (Zinc finger protein 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005210 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.5e-129
Identity = 250/284 (88.03%), Postives = 258/284 (90.85%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKSTSERETHDFMNVESFSQLPFIRPAP EKGIRLFGIEFGSRNAA   SASS EESES
Sbjct: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSRNAA-TVSASSIEESES 60

Query: 61  GETIIACEDAKENNSD-NNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120
           GET+IACEDAKENN+D NNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR
Sbjct: 61  GETVIACEDAKENNNDGNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120

Query: 121 AHLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSP---ATAAA 180
           AHLQSNAAAMVHGIG FSDAAHVYGL+NYQRLGAT     +NNYPSWNRNSP   A AAA
Sbjct: 121 AHLQSNAAAMVHGIGPFSDAAHVYGLMNYQRLGAT----HLNNYPSWNRNSPAATAAAAA 180

Query: 181 STRFYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVP-SFGGRERSSLHPLPLFSGD 240
           +TRFYGS  GQYS  A ATPINGSPLAMWRISAVQN+NVP SFGGRERSSLHPLPLFSGD
Sbjct: 181 ATRFYGSSGGQYSSAATATPINGSPLAMWRISAVQNSNVPSSFGGRERSSLHPLPLFSGD 240

Query: 241 EMVKGGSGGGGTAVSGGGSGGTHQTSRFVYEAKTADQVSLDLHL 280
           EM+KG  GGGGTAVS GGSGG+HQT RFVYEAKTADQVSLDLHL
Sbjct: 241 EMMKGAGGGGGTAVSAGGSGGSHQTGRFVYEAKTADQVSLDLHL 279

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy TrEMBL
Match: A0A1S3B727 (zinc finger protein 8-like OS=Cucumis melo OX=3656 GN=LOC103486743 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.5e-129
Identity = 250/284 (88.03%), Postives = 258/284 (90.85%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKSTSERETHDFMNVESFSQLPFIRPAP EKGIRLFGIEFGSRNAA   SASS EESES
Sbjct: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSRNAA-TVSASSIEESES 60

Query: 61  GETIIACEDAKENNSD-NNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120
           GET+IACEDAKENN+D NNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR
Sbjct: 61  GETVIACEDAKENNNDGNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120

Query: 121 AHLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSP---ATAAA 180
           AHLQSNAAAMVHGIG FSDAAHVYGL+NYQRLGAT     +NNYPSWNRNSP   A AAA
Sbjct: 121 AHLQSNAAAMVHGIGPFSDAAHVYGLMNYQRLGAT----HLNNYPSWNRNSPAATAAAAA 180

Query: 181 STRFYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVP-SFGGRERSSLHPLPLFSGD 240
           +TRFYGS  GQYS  A ATPINGSPLAMWRISAVQN+NVP SFGGRERSSLHPLPLFSGD
Sbjct: 181 ATRFYGSSGGQYSSAATATPINGSPLAMWRISAVQNSNVPSSFGGRERSSLHPLPLFSGD 240

Query: 241 EMVKGGSGGGGTAVSGGGSGGTHQTSRFVYEAKTADQVSLDLHL 280
           EM+KG  GGGGTAVS GGSGG+HQT RFVYEAKTADQVSLDLHL
Sbjct: 241 EMMKGAGGGGGTAVSAGGSGGSHQTGRFVYEAKTADQVSLDLHL 279

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy TrEMBL
Match: A0A6J1F2B3 (zinc finger protein GIS2-like OS=Cucurbita moschata OX=3662 GN=LOC111441502 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.4e-124
Identity = 242/282 (85.82%), Postives = 254/282 (90.07%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKS  ERETHDFMNVESFSQLPFIRPAP EKGIRLFGIEFGS+N  VAASASS EESES
Sbjct: 1   MDKSNPERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSQN-VVAASASSIEESES 60

Query: 61  GETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120
            +T+IACEDAKENN+DNNN+GGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA
Sbjct: 61  DDTVIACEDAKENNNDNNNSGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120

Query: 121 HLQSNAAAMVHGIGAFSDAAHVYGLVNYQRL-GATPSSLQINNYPSWNRNSPATAAAS-T 180
           HLQSNAAAMVHGIGAFSDAAHVYGL+NYQRL GA PS LQ+NNYPSWNRNSP  A AS T
Sbjct: 121 HLQSNAAAMVHGIGAFSDAAHVYGLMNYQRLAGAAPSGLQVNNYPSWNRNSPTAATASAT 180

Query: 181 RFYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVPSFGGRERSSLHPLPLFSGDEMV 240
           RFYGSP GQYSP A   PINGSPLAMWRISAVQ NNVP+FG RER+S+HPLPLFSGDEM+
Sbjct: 181 RFYGSPGGQYSPAATTAPINGSPLAMWRISAVQ-NNVPAFGSRERTSMHPLPLFSGDEMM 240

Query: 241 KGGSGGGGTAVSGGGSGGTHQTSRFVYEAKT-ADQVSLDLHL 280
           KGGS    TAV GGGSGG+HQT RFVYEAKT ADQVSLDLHL
Sbjct: 241 KGGS----TAVGGGGSGGSHQT-RFVYEAKTAADQVSLDLHL 275

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy TrEMBL
Match: A0A6J1J692 (zinc finger protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111481724 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.7e-123
Identity = 241/281 (85.77%), Postives = 254/281 (90.39%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKS SERETHDFMNVESFSQLPFIRPAP EKGIRLFGIEFGS+N  VAASASS EESES
Sbjct: 1   MDKSNSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSQN-VVAASASSIEESES 60

Query: 61  GETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120
             T+IACEDAKENN D+NN+GGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA
Sbjct: 61  DYTVIACEDAKENN-DDNNSGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120

Query: 121 HLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSP-ATAAASTR 180
           HLQSNAAAMVHGIGAFSDAAHVYGL+NYQRLGA PS LQ+NNYPSWNRNSP A+ A++TR
Sbjct: 121 HLQSNAAAMVHGIGAFSDAAHVYGLMNYQRLGAAPSGLQVNNYPSWNRNSPTASTASATR 180

Query: 181 FYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVPSFGGRERSSLHPLPLFSGDEMVK 240
           FYGSP GQYSP A   PINGSPLAMWRISAVQ NNVP+ G RERSS+HPLPLFSGDEM+K
Sbjct: 181 FYGSPGGQYSPAATTAPINGSPLAMWRISAVQ-NNVPALGSRERSSMHPLPLFSGDEMMK 240

Query: 241 GGSGGGGTAVSGGGSGGTHQTSRFVYEAKT-ADQVSLDLHL 280
           GGS    TAV GGGSGG+HQT RFVYEAKT ADQVSLDLHL
Sbjct: 241 GGS----TAVVGGGSGGSHQT-RFVYEAKTAADQVSLDLHL 273

[Close]

BLAST of CcUC10G203020.1 vs. ExPASy TrEMBL
Match: A0A6J1FYK1 (zinc finger protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111448765 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.7e-114
Identity = 225/279 (80.65%), Postives = 238/279 (85.30%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESES 60
           MDKS SERETHDFMNVESFSQLPFIRP P EKGIRLFGIEFGSRNAA AA+ASS E+SES
Sbjct: 1   MDKSNSERETHDFMNVESFSQLPFIRPVPKEKGIRLFGIEFGSRNAA-AATASSVEDSES 60

Query: 61  GETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRA 120
           G+ I+ACED KE N +N NNGGES+RRFECH+CCRNFPTSQALGGHQNAHKRERQHAKRA
Sbjct: 61  GDMIVACEDGKEYN-NNENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKRA 120

Query: 121 HLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSPATAAASTRF 180
           HLQSNAA MVHGIG FSDAAHVYGL+NY RLGA PSSL  NNYPSWNRNSP+ AA +TRF
Sbjct: 121 HLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSAAAPATRF 180

Query: 181 YGSPSGQYSPVAAATPINGSPLAMWRISAVQNNNVPSFGGRERSSLHPLPLFSGDEMVKG 240
           YGSP G YSP AAATPINGSPLAMWRISAVQNN        ERSSLHPLPL SGDEM K 
Sbjct: 181 YGSPGGSYSPAAAATPINGSPLAMWRISAVQNN------VSERSSLHPLPLLSGDEMTK- 240

Query: 241 GSGGGGTAVSGGGSGGTHQTSRFVYEAKTADQVSLDLHL 280
               GG AV GGG+GG+ QT R VYEAKTA+QVSLDLHL
Sbjct: 241 ---RGGAAVGGGGAGGSLQT-RLVYEAKTAEQVSLDLHL 266

[Close]

BLAST of CcUC10G203020.1 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 9.0e-31
Identity = 113/292 (38.70%), Postives = 147/292 (50.34%), Query Frame = 0


Query: 1   MDKSTSERETHDFMNVESFSQLPFIR--PAPNEKGIRLFGIEFGSRNAAVAASASSAEES 60
           MD++T E ET DFMNVESFSQLPFIR     N K IR+FG +F  R+ ++  +    + +
Sbjct: 1   MDEATGETETQDFMNVESFSQLPFIRRPKDKNPKPIRVFGKDFTGRDFSI--TTGQEDYT 60

Query: 61  ESGETIIACEDAKENNSDNN---NNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQ 120
           +  +T    E+ +E+ + +N   NN    +RRFECHYC RNFPTSQALGGHQNAHKRERQ
Sbjct: 61  DPYQTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQ 120

Query: 121 HAKRAHLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWNRNSPATAA 180
            AKR            G+ ++           +      P S +  +YPSW  N P TAA
Sbjct: 121 LAKR------------GVSSY-----------FYHPDNNPYSYR--HYPSWT-NGPLTAA 180

Query: 181 ASTRFYGS---PSGQYSPVAAATPINGSPLAMW----RISAVQNNNVP-SFGGRERSSLH 240
            S   + S   PSG Y+      P  GS L +W    R+  V N+N   +  G   SS  
Sbjct: 181 RSYGGFSSGPKPSGYYT-----RPSYGSQLGLWRLPPRVQGVYNSNAAFTSNGSSSSSNS 240

Query: 241 PLPLFSGDEMVKGGSGGGGTAVSGGGSGGTHQTSRFVYEAKTADQVSLDLHL 280
            LPL +  +       GG  A +   S G      +       D VSLDLHL
Sbjct: 241 TLPLLTRSQTQLSSQVGGSAAQNRMSSYG------YGLSPNVQDHVSLDLHL 253

[Close]

BLAST of CcUC10G203020.1 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 )

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-30
Identity = 99/227 (43.61%), Postives = 124/227 (54.63%), Query Frame = 0


Query: 1   MDKSTSERETHDFM--NVESFSQLPFI-RPAPNEKG--IRLFGIEF-GSRNAAVAASAS- 60
           MD++   RETHDFM  NVESFSQLPFI R  P EK   IRLFG E  G  +  ++A  S 
Sbjct: 1   MDETNGRRETHDFMNVNVESFSQLPFIRRTPPKEKAAIIRLFGQELVGDNSDNLSAEPSD 60

Query: 61  ---SAEESESGETIIACEDAKENNSDNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAH 120
              + +  ES E I   +  K+ + D +NN   ++RRFECHYC RNFPTSQALGGHQNAH
Sbjct: 61  HQTTTKNDESSENIKDKDKEKDKDKDKDNN---NNRRFECHYCFRNFPTSQALGGHQNAH 120

Query: 121 KRERQHAKRAHLQSNAAAMVHGIGAFSDAAHVYGLVNYQRLGATPSSLQINNYPSWN--- 180
           KRERQHAKR  + S     +H      D  H+YG +N         +    +YPSW    
Sbjct: 121 KRERQHAKRGSMTS----YLHHHQP-HDPHHIYGFLN---------NHHHRHYPSWTTEA 180

Query: 181 RNSPATAAASTRFYGSPSGQYSPVAAATPINGSPLAMWRISAVQNNN 215
           R+        T  Y S +    P +    INGSPL +WR+    + N
Sbjct: 181 RSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPLGLWRVPPSTSTN 210

[Close]

BLAST of CcUC10G203020.1 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-22
Identity = 65/125 (52.00%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 9   ETHDFMNVESFSQLPFIRPAPNEKGIRLFGIEFGSRNAAVAASASSAEESESGETIIACE 68
           +T+DFMNV SFS        P E+ IRLFG EFG          +S EESES        
Sbjct: 2   KTYDFMNVNSFS--------PKERPIRLFGFEFG----------ASHEESES-------- 61

Query: 69  DAKENNSDNNNN--GGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSNA 128
             K+N ++NN +       +RF+CHYC RNFPTSQALGGHQNAHKRERQ  KR +L SNA
Sbjct: 62  --KDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHSNA 98

Query: 129 AAMVH 132
           AA  H
Sbjct: 122 AAFFH 98

[Close]

BLAST of CcUC10G203020.1 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.5e-12
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 81  GGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQS--NAAAMVHGIGAFS 138
           GG   R++EC YCCR F  SQALGGHQNAHK+ERQ  KRA LQ+  NAAA     G+ S
Sbjct: 66  GGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSAS 124

[Close]

BLAST of CcUC10G203020.1 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-10
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 79  NNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHL 123
           +  G  SR++EC YCCR F  SQALGGHQNAHK+ERQ  KRA +
Sbjct: 32  SGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQM 75

The following BLAST results are available for this feature:

BLAST of CcUC10G203020.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906200.1	1.8e-129	90.11	zinc finger protein 8-like [Benincasa hispida]	[more]
XP_008443018.1	3.0e-129	88.03	PREDICTED: zinc finger protein 8-like [Cucumis melo] >KAA0043753.1 zinc finger p...	[more]
XP_004136728.3	8.8e-129	87.99	zinc finger protein 8 [Cucumis sativus] >KGN59419.2 hypothetical protein Csa_001...	[more]
XP_022934297.1	2.9e-124	85.82	zinc finger protein GIS2-like [Cucurbita moschata]	[more]
XP_022983069.1	5.5e-123	85.77	zinc finger protein 8-like [Cucurbita maxima]	[more]

BLAST of CcUC10G203020.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WI0	1.3e-29	38.70	Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1	[more]
P93751	2.2e-29	43.61	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1	[more]
Q9FG05	4.8e-21	52.00	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
Q9C9H1	3.5e-11	61.02	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39265	4.2e-09	63.64	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]

BLAST of CcUC10G203020.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJW6	1.5e-129	88.03	Zinc finger protein 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B727	1.5e-129	88.03	zinc finger protein 8-like OS=Cucumis melo OX=3656 GN=LOC103486743 PE=4 SV=1	[more]
A0A6J1F2B3	1.4e-124	85.82	zinc finger protein GIS2-like OS=Cucurbita moschata OX=3662 GN=LOC111441502 PE=4...	[more]
A0A6J1J692	2.7e-123	85.77	zinc finger protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111481724 PE=4 SV=1	[more]
A0A6J1FYK1	1.7e-114	80.65	zinc finger protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111448765 PE=4 SV=1	[more]

BLAST of CcUC10G203020.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58070.1	9.0e-31	38.70	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G41940.1	1.5e-30	43.61	zinc finger protein 8	[more]
AT5G06650.1	3.4e-22	52.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G68360.1	2.5e-12	61.02	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	3.0e-10	63.64	zinc finger protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044291	Zinc finger protein GIS/GIS2/ZFP8	PANTHER	PTHR46547	ZINC FINGER PROTEIN GIS	coord: 1..279
None	No IPR available	PANTHER	PTHR46547:SF7	ZINC FINGER PROTEIN GIS	coord: 1..279
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 90..110
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 88..115 score: 10.990419
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 85..116

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G203020	CcUC10G203020	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G203020.1-exon	CcUC10G203020.1-exon-CicolChr10:30286685..30287524	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G203020.1-cds	CcUC10G203020.1-cds-CicolChr10:30286685..30287524	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G203020.1	CcUC10G203020.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009739	response to gibberellin
biological_process	GO:0010026	trichome differentiation
biological_process	GO:0010090	trichome morphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity