CcUC10G202690.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G202690.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Myb family transcription factor family protein
Location	CicolChr10: 29962869 .. 29963384 (-)
Sequence length	516
RNA-Seq Expression	CcUC10G202690.1
Synteny	CcUC10G202690.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCCTTAATTCTTCTTCACTTCAAGTTTTGCCTTCGCCTTCATCTTCAAGCTTGAGATTAGTGAAGTTCAAAACTATTTTGCAGACTTTCATTCTTTCTCTGGCTAGAGCTATCTCCAGAGCCAAAACCACGGCGCTTCACATCTTAAAACAAGCCAATTATCAATCCGCCATAGCTTTGAAGAGGAACAAGAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTCACTCCCCCAGTGCTCACCTGGGACCATGAATACTCCGGCGCCGGCGCCGGTGGCGACCAGCTTCGTGGGTATTTGCAGTGGCTGGAGGAAAGAGATATTAATAAGATTAAAGATGAAGACGAAGATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAAGGTGTCACGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACGCGATGGCTAGAAGCTTTTGA

mRNA sequence

ATGGGTTCCCTTAATTCTTCTTCACTTCAAGTTTTGCCTTCGCCTTCATCTTCAAGCTTGAGATTAGTGAAGTTCAAAACTATTTTGCAGACTTTCATTCTTTCTCTGGCTAGAGCTATCTCCAGAGCCAAAACCACGGCGCTTCACATCTTAAAACAAGCCAATTATCAATCCGCCATAGCTTTGAAGAGGAACAAGAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTCACTCCCCCAGTGCTCACCTGGGACCATGAATACTCCGGCGCCGGCGCCGGTGGCGACCAGCTTCGTGGGTATTTGCAGTGGCTGGAGGAAAGAGATATTAATAAGATTAAAGATGAAGACGAAGATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAAGGTGTCACGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACGCGATGGCTAGAAGCTTTTGA

Coding sequence (CDS)

ATGGGTTCCCTTAATTCTTCTTCACTTCAAGTTTTGCCTTCGCCTTCATCTTCAAGCTTGAGATTAGTGAAGTTCAAAACTATTTTGCAGACTTTCATTCTTTCTCTGGCTAGAGCTATCTCCAGAGCCAAAACCACGGCGCTTCACATCTTAAAACAAGCCAATTATCAATCCGCCATAGCTTTGAAGAGGAACAAGAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTCACTCCCCCAGTGCTCACCTGGGACCATGAATACTCCGGCGCCGGCGCCGGTGGCGACCAGCTTCGTGGGTATTTGCAGTGGCTGGAGGAAAGAGATATTAATAAGATTAAAGATGAAGACGAAGATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAAGGTGTCACGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACGCGATGGCTAGAAGCTTTTGA

Protein sequence

MGSLNSSSLQVLPSPSSSSLRLVKFKTILQTFILSLARAISRAKTTALHILKQANYQSAIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPPVLTWDHEYSGAGAGGDQLRGYLQWLEERDINKIKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDAMARSF

Homology

[Close]

BLAST of CcUC10G202690.1 vs. NCBI nr
Match: XP_038906153.1 (uncharacterized protein LOC120092033 [Benincasa hispida])

HSP 1 Score: 247.7 bits (631), Expect = 7.4e-62
Identity = 142/175 (81.14%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 1   MGSLNS-----SSLQVLPSPS--SSSLRLVKFKTILQTFILSLARAISRAKTTALHILKQ 60
           MGSLNS     SSLQ+LPS S  S S  LVKFK +LQT ILSLARAISRAKTTA HILKQ
Sbjct: 1   MGSLNSSSSPFSSLQILPSSSSPSPSSSLVKFKAVLQTLILSLARAISRAKTTAFHILKQ 60

Query: 61  ANYQSAIALKRNKKKLLYGSFRLHYNWCSVSSNKY-SHVTPPVLTWDHEYS-GAGAGGDQ 120
           AN+Q AIALKRNKKKLLYGSFRLHYNWCSVSSN Y SHVTPPV+TWDHEYS G G GGDQ
Sbjct: 61  ANHQYAIALKRNKKKLLYGSFRLHYNWCSVSSNYYNSHVTPPVITWDHEYSGGGGGGGDQ 120

Query: 121 LRGYLQWLEERD-INKIKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQD 166
           L GYL+WLEER+  NKIK+E E VNEIDKLAEIFIAR HEKFKLEKQESYRRFQD
Sbjct: 121 LGGYLEWLEERENNNKIKNE-EGVNEIDKLAEIFIARSHEKFKLEKQESYRRFQD 174

[Close]

BLAST of CcUC10G202690.1 vs. NCBI nr
Match: XP_031739057.1 (uncharacterized protein LOC116402823 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 138/180 (76.67%), Postives = 147/180 (81.67%), Query Frame = 0


Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKTILQTFILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFK +LQT ILSLARAISRAKTTA        +QSA  
Sbjct: 12  SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTA--------FQSANT 71

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPPVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP VLT DH   G G GGDQL GYLQWLE
Sbjct: 72  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGYLQWLE 131

Query: 123 ERDINK-------IKD--EDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDAMARSF 172
           ERD+NK       ++D  ED+ VNEIDKLAEIFIARCHEKFKLEKQESYRRFQD MARSF
Sbjct: 132 ERDVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 183

[Close]

BLAST of CcUC10G202690.1 vs. NCBI nr
Match: XP_008443602.1 (PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo] >KAA0043723.1 uncharacterized protein E6C27_scaffold236G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 138/181 (76.24%), Postives = 148/181 (81.77%), Query Frame = 0


Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKTILQTFILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFK +LQT I SLARAISRAKTTA        +QSA I
Sbjct: 11  SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTA--------FQSANI 70

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPPVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP VLT+DH   G GAGGDQL GYLQWLE
Sbjct: 71  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGI-GCGAGGDQLGGYLQWLE 130

Query: 123 ERDINK----------IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDAMARS 172
           ERD+NK          ++D +E VNEIDKLAEIFIARCHEKFKLEKQESYRRFQD MARS
Sbjct: 131 ERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 182

[Close]

BLAST of CcUC10G202690.1 vs. NCBI nr
Match: TYK25410.1 (uncharacterized protein E5676_scaffold352G005520 [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 128/170 (75.29%), Postives = 138/170 (81.18%), Query Frame = 0


Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKTILQTFILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFK +LQT I SLARAISRAKTTA        +QSA I
Sbjct: 11  SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTA--------FQSANI 70

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPPVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP VLT+DH   G GAGGDQL GYLQWLE
Sbjct: 71  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGI-GCGAGGDQLGGYLQWLE 130

Query: 123 ERDINK----------IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESY 161
           ERD+NK          ++D +E VNEIDKLAEIFIARCHEKFKLEKQESY
Sbjct: 131 ERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY 171

[Close]

BLAST of CcUC10G202690.1 vs. NCBI nr
Match: KGN59451.2 (hypothetical protein Csa_001296 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48
Identity = 111/145 (76.55%), Postives = 116/145 (80.00%), Query Frame = 0


Query: 37  ARAISRAKTTALHILKQANYQSA-IALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPPV 96
           ARAISRAKTTA        +QSA  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP V
Sbjct: 12  ARAISRAKTTA--------FQSANTALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAV 71

Query: 97  LTWDHEYSGAGAGGDQLRGYLQWLEERDINK-------IKD--EDEDVNEIDKLAEIFIA 156
           LT DH   G G GGDQL GYLQWLEERD+NK       ++D  ED+ VNEIDKLAEIFIA
Sbjct: 72  LTCDHGIGGGGGGGDQLGGYLQWLEERDVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIA 131

Query: 157 RCHEKFKLEKQESYRRFQDAMARSF 172
           RCHEKFKLEKQESYRRFQD MARSF
Sbjct: 132 RCHEKFKLEKQESYRRFQDMMARSF 148

[Close]

BLAST of CcUC10G202690.1 vs. ExPASy TrEMBL
Match: A0A0A0LBV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.8e-61
Identity = 138/180 (76.67%), Postives = 147/180 (81.67%), Query Frame = 0


Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKTILQTFILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFK +LQT ILSLARAISRAKTTA        +QSA  
Sbjct: 6   SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTA--------FQSANT 65

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPPVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP VLT DH   G G GGDQL GYLQWLE
Sbjct: 66  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGYLQWLE 125

Query: 123 ERDINK-------IKD--EDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDAMARSF 172
           ERD+NK       ++D  ED+ VNEIDKLAEIFIARCHEKFKLEKQESYRRFQD MARSF
Sbjct: 126 ERDVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 177

[Close]

BLAST of CcUC10G202690.1 vs. ExPASy TrEMBL
Match: A0A5A7TJT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00520 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.2e-60
Identity = 138/181 (76.24%), Postives = 148/181 (81.77%), Query Frame = 0


Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKTILQTFILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFK +LQT I SLARAISRAKTTA        +QSA I
Sbjct: 11  SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTA--------FQSANI 70

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPPVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP VLT+DH   G GAGGDQL GYLQWLE
Sbjct: 71  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGI-GCGAGGDQLGGYLQWLE 130

Query: 123 ERDINK----------IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDAMARS 172
           ERD+NK          ++D +E VNEIDKLAEIFIARCHEKFKLEKQESYRRFQD MARS
Sbjct: 131 ERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 182

[Close]

BLAST of CcUC10G202690.1 vs. ExPASy TrEMBL
Match: A0A1S3B8H1 (uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.2e-60
Identity = 138/181 (76.24%), Postives = 148/181 (81.77%), Query Frame = 0


Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKTILQTFILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFK +LQT I SLARAISRAKTTA        +QSA I
Sbjct: 11  SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTA--------FQSANI 70

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPPVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP VLT+DH   G GAGGDQL GYLQWLE
Sbjct: 71  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGI-GCGAGGDQLGGYLQWLE 130

Query: 123 ERDINK----------IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDAMARS 172
           ERD+NK          ++D +E VNEIDKLAEIFIARCHEKFKLEKQESYRRFQD MARS
Sbjct: 131 ERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 182

[Close]

BLAST of CcUC10G202690.1 vs. ExPASy TrEMBL
Match: A0A5D3DQ67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005520 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.5e-55
Identity = 128/170 (75.29%), Postives = 138/170 (81.18%), Query Frame = 0


Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKTILQTFILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFK +LQT I SLARAISRAKTTA        +QSA I
Sbjct: 11  SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTA--------FQSANI 70

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPPVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP VLT+DH   G GAGGDQL GYLQWLE
Sbjct: 71  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGI-GCGAGGDQLGGYLQWLE 130

Query: 123 ERDINK----------IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESY 161
           ERD+NK          ++D +E VNEIDKLAEIFIARCHEKFKLEKQESY
Sbjct: 131 ERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESY 171

[Close]

BLAST of CcUC10G202690.1 vs. ExPASy TrEMBL
Match: A0A6J1J6X1 (uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.3e-47
Identity = 115/165 (69.70%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 6   SSSLQVLPSPSSSSLRLVKFKTILQTFILSLARAISRAKTTALHILKQANYQSAIALKRN 65
           SSSLQ+ PS SS        K +LQT ILSLARAISRAKTTALHILKQAN+QSAIA KRN
Sbjct: 9   SSSLQIFPSSSS-------LKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRN 68

Query: 66  KKKLLYGSFRLHYNWCSVSSNKYSHVTPPVLTWDHEYSGAGAGGDQLRGYLQWLEERDIN 125
           K KLL+GSFRLHYNWCS SSN   HV PP LTWD   SGA    D L GYLQWLE+RD  
Sbjct: 69  KNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTWDDNSSGA---ADHLAGYLQWLEDRD-- 128

Query: 126 KIKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDAMARS 171
           K ++     NEIDKLA+IFIARCHEKF+LEKQESYR+FQ+  ARS
Sbjct: 129 KEEELCRHANEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS 158

[Close]

BLAST of CcUC10G202690.1 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-21
Identity = 75/186 (40.32%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 4   LNSSSLQVLPSPSSSSLRLVKFKTILQTF----ILSLARAISRAKTTALHILKQANYQSA 63
           L SSS     S SSSS++L   KT++Q      +    RA+++AK+  L I K  +    
Sbjct: 3   LKSSSPSSSSSSSSSSMKL---KTLIQNLLTHPLYRFLRALAKAKSIFLEISKHNSNNKK 62

Query: 64  IAL--------KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP---PVLTWDHEYSGAGAG 123
             L         +N++K+ +GSFRLHYNWCS      SHV P   P        +G    
Sbjct: 63  RKLMMLFPTKASKNQRKIFFGSFRLHYNWCS------SHVVPVPQPFPFPSSYINGEEED 122

Query: 124 GDQLRGYLQWLEER---DINKIKD--EDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRF 170
             QL GYL+WLE +   D+ +I D   D   ++ID LA++FIA CHEKF LEK ESYRRF
Sbjct: 123 DSQLSGYLEWLEHKKFDDVEEIGDVVADGGDDDIDHLADMFIANCHEKFLLEKVESYRRF 179

[Close]

BLAST of CcUC10G202690.1 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21
Identity = 84/211 (39.81%), Postives = 111/211 (52.61%), Query Frame = 0


Query: 3   SLNSSSLQVLPSPSSSSLRLVKFKTILQTFILS----LARAISRAKTTALHIL--KQANY 62
           S++SS      SP+SSS++L   K+++QT I+S    L R ISR  +  + +L  KQ N+
Sbjct: 11  SMSSSQCSSSSSPTSSSMKL---KSLIQTLIISQVCRLLREISRVSSILVRVLRKKQYNF 70

Query: 63  QSAIAL-------KRNKKKLLYGSFRLHYNWCSVSSNKYSHVTP---PV----------- 122
            S  +L       K+ K  +L+GSFRLHYN+CS      SHV P   PV           
Sbjct: 71  LSVSSLLYPKRVSKKQKNNILFGSFRLHYNFCS------SHVVPVSAPVRLPEELYLAHL 130

Query: 123 ---LTWDHEYSGAGAGG--------DQLRGYLQWLEERDINKIKDEDED-----VNEIDK 171
               TW+  YS     G         QL  YL+ LE+    K+KD  E+     +NEIDK
Sbjct: 131 VHESTWESMYSTESMDGRDDDDQEPSQLSSYLRQLED----KVKDGQEEETETMMNEIDK 190

[Close]

BLAST of CcUC10G202690.1 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 69/175 (39.43%), Postives = 87/175 (49.71%), Query Frame = 0


Query: 16  SSSSLRLVKFKTILQTFI----LSLARAISRAKTTALHILKQANYQSAIALKRNKKKLLY 75
           SSSS      KT+    I      L R++SRA++  + I            K NKK+L  
Sbjct: 6   SSSSSHSTNLKTLFINLITHSLYRLLRSLSRARSVLIEI-----------SKHNKKRL-- 65

Query: 76  GSFRLHYNWCSVSSNKY------SHVTPPVL-TWDHEYSGAGAGGDQLRG-YLQWLEER- 135
             F + +     S N++      SHV  PV   +     G     D L   YLQWLEER 
Sbjct: 66  --FMMMFYTTKSSMNQHNIFFGSSHVVVPVTKPFPFSLDGHVEDEDNLESQYLQWLEERV 125

Query: 136 DINKIKDEDEDVNE-------IDKLAEIFIARCHEKFKLEKQESYRRFQDAMARS 171
           D N   ++D+ V E       ID+LA+ FIARCHEKF LEK ESYRRFQD +ARS
Sbjct: 126 DENNNINDDQSVGERDVGDDDIDRLADKFIARCHEKFLLEKVESYRRFQDMLARS 165

The following BLAST results are available for this feature:

BLAST of CcUC10G202690.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906153.1	7.4e-62	81.14	uncharacterized protein LOC120092033 [Benincasa hispida]	[more]
XP_031739057.1	1.8e-60	76.67	uncharacterized protein LOC116402823 [Cucumis sativus]	[more]
XP_008443602.1	2.4e-60	76.24	PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo] >KAA0043723.1 unc...	[more]
TYK25410.1	1.1e-54	75.29	uncharacterized protein E5676_scaffold352G005520 [Cucumis melo var. makuwa]	[more]
KGN59451.2	1.6e-48	76.55	hypothetical protein Csa_001296 [Cucumis sativus]	[more]

BLAST of CcUC10G202690.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G202690.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBV5	8.8e-61	76.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1	[more]
A0A5A7TJT8	1.2e-60	76.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8H1	1.2e-60	76.24	uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=...	[more]
A0A5D3DQ67	5.5e-55	75.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1J6X1	3.3e-47	69.70	uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779...	[more]

BLAST of CcUC10G202690.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57950.1	1.0e-21	40.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G06790.1	1.4e-21	39.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G42180.1	2.1e-14	39.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 135..169 e-value: 2.2E-13 score: 49.5
None	No IPR available	PANTHER	PTHR33450:SF4	DUF761 DOMAIN PROTEIN	coord: 7..171
None	No IPR available	PANTHER	PTHR33450	EMB\|CAB67623.1-RELATED	coord: 7..171

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G202690	CcUC10G202690	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G202690.1-exon	CcUC10G202690.1-exon-CicolChr10:29962869..29963384	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G202690.1-cds	CcUC10G202690.1-cds-CicolChr10:29962869..29963384	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G202690.1	CcUC10G202690.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity