CcUC10G198860.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G198860.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Basic helix-loop-helix transcription factor
Location	CicolChr10: 25665695 .. 25667395 (-)
Sequence length	863
RNA-Seq Expression	CcUC10G198860.1
Synteny	CcUC10G198860.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAGGATTTTGAGGAAAAAACCCAATGGATCAAAGCTCTGAGCTTTACAGATTGCTGGCACAGAACGGAGCCTTCAGCCTGGGCGGCGCCGGCGGGTCCTGCGGCTTTCCGGCGACCCAAAGCATGTCGAGCTCTTCCTCTTATTACCCTTTGGATAAGTCCACGACGGCGGCCGCCAGTGAGGCAGCGGTGCCGTCGGCCCACGACAGAGCTCTGACGGCCCTCAAGAATCACAAGGAAGCTGAGAAGCGGAGAAGAGAGAGAATCAACTCTCATCTTGATAAGCTTCGGACTCTTCTTCCTTGTAATTCTAAGGTCATTTCATTTACTCTCATTATTTCTCATTTTTTTAAAAATATTTTCAACACAAATTTTCTTCTTTAAAATTTATAAACCATACTTATTATTATTATTTTTTTTAAAAAAAAAAACTGAATCTTCTCAACAGGTTTTTCTCCTATTAGTTTATATTAAAATTAAAATTTGAAAAATTCATAATGTGAACATCCAAAGTTAGAATTGAAAACTTTGATTTCAGTTTTTTTTTTTTTTTTCCTCCCTCTCACTCGTTTTACTATATGAACTAGAGACAAGTAAAGATAATGATCTAATTGATGTGAGAATTTTTTTTTTAAAAAAAAAATTTTAATCCATGAGTGTTAAGCCTATAGTTTACGTGCACCTCAACTAATCCATAAGAAAATTCGTAGGTGACCATTATTGATAAAACACACTCCCTCCTAGCCTTTTAAAAAACTCAAACCCTAAGCCAATGTATGTAGAATTTTAGTCGTATATCCCAACGAAAAAGAAAGAAGGAAGGATATGTGTGTATGTACGTAGTGACAGGAAGAAGAATGAGTTTGTAAGGTGGGGTTTTAAGAATCTTTTGTGAACTCCAACTCTAAGATTTTCTGCACCAACAACAGATGTGTGTGTTTGTTTGTTGGGTTTAGAGAGAGTGTTTGTTTGTTCAAAGCAAACTGCAAGTCTCTGTACTGCAAAAAAAGTCATAAAATACAGCCACACTTTTTTCTTCTCTCACCAGCCTTAACTTGTTCGCCTATTTTATAGTGTATTTATGGGAAAGTTGAGAAGCTTTTCCACCCTTAACATACACTTTTTTTTTTTTTTGGGTTTTTATAATAATCAGACGGACAAGGCATCTCTTCTGGCAAAAGTGGTTGAGCGAGTGAAAGAGCTGAAGAACGAGACGTCGGAGATCGCGGAGCTTGAAAGCTTCCCTTCGGAGACGGACGAGATCAGTGTGCTGTCCGGAGAGCAGTCGGAGGACGGAAGGCTTGTGTTCAAGGCGTCGTTGTGTTGCGAGGACCGCTCCGACCTCATCCCGGACCTCAACGACATCCTTAATTCCCTCCAACTCAAAACCCTTAGGGCTGACATTGTCACGGTGGGTGGCCGGATCCGCAACGTCCTCCTTATCGCTGCCAACGACCACCACAGCCTCGAGTCCGTTCATTTCCTTCAAAATGCCTTGAAATCTCTCCTTGAACGCTCCAATTCTAGCCTTACATCCAAGAGGAGGCGCCTTGTACTTCACCACAAATGATCATTTCATTCTCCAAATATCTTCCTTTGCTTTTCTTTCCTATTCTATTCTAATATTTTCTCCTCTTTCTTTTCTGTTATCTTTATTTTTTTAATCCAAATATTTAAACGTCATGAACATGCA

mRNA sequence

AAAAAAAAAAAGGATTTTGAGGAAAAAACCCAATGGATCAAAGCTCTGAGCTTTACAGATTGCTGGCACAGAACGGAGCCTTCAGCCTGGGCGGCGCCGGCGGGTCCTGCGGCTTTCCGGCGACCCAAAGCATGTCGAGCTCTTCCTCTTATTACCCTTTGGATAAGTCCACGACGGCGGCCGCCAGTGAGGCAGCGGTGCCGTCGGCCCACGACAGAGCTCTGACGGCCCTCAAGAATCACAAGGAAGCTGAGAAGCGGAGAAGAGAGAGAATCAACTCTCATCTTGATAAGCTTCGGACTCTTCTTCCTTGTAATTCTAAGACGGACAAGGCATCTCTTCTGGCAAAAGTGGTTGAGCGAGTGAAAGAGCTGAAGAACGAGACGTCGGAGATCGCGGAGCTTGAAAGCTTCCCTTCGGAGACGGACGAGATCAGTGTGCTGTCCGGAGAGCAGTCGGAGGACGGAAGGCTTGTGTTCAAGGCGTCGTTGTGTTGCGAGGACCGCTCCGACCTCATCCCGGACCTCAACGACATCCTTAATTCCCTCCAACTCAAAACCCTTAGGGCTGACATTGTCACGGTGGGTGGCCGGATCCGCAACGTCCTCCTTATCGCTGCCAACGACCACCACAGCCTCGAGTCCGTTCATTTCCTTCAAAATGCCTTGAAATCTCTCCTTGAACGCTCCAATTCTAGCCTTACATCCAAGAGGAGGCGCCTTGTACTTCACCACAAATGATCATTTCATTCTCCAAATATCTTCCTTTGCTTTTCTTTCCTATTCTATTCTAATATTTTCTCCTCTTTCTTTTCTGTTATCTTTATTTTTTTAATCCAAATATTTAAACGTCATGAACATGCA

Coding sequence (CDS)

ATGGATCAAAGCTCTGAGCTTTACAGATTGCTGGCACAGAACGGAGCCTTCAGCCTGGGCGGCGCCGGCGGGTCCTGCGGCTTTCCGGCGACCCAAAGCATGTCGAGCTCTTCCTCTTATTACCCTTTGGATAAGTCCACGACGGCGGCCGCCAGTGAGGCAGCGGTGCCGTCGGCCCACGACAGAGCTCTGACGGCCCTCAAGAATCACAAGGAAGCTGAGAAGCGGAGAAGAGAGAGAATCAACTCTCATCTTGATAAGCTTCGGACTCTTCTTCCTTGTAATTCTAAGACGGACAAGGCATCTCTTCTGGCAAAAGTGGTTGAGCGAGTGAAAGAGCTGAAGAACGAGACGTCGGAGATCGCGGAGCTTGAAAGCTTCCCTTCGGAGACGGACGAGATCAGTGTGCTGTCCGGAGAGCAGTCGGAGGACGGAAGGCTTGTGTTCAAGGCGTCGTTGTGTTGCGAGGACCGCTCCGACCTCATCCCGGACCTCAACGACATCCTTAATTCCCTCCAACTCAAAACCCTTAGGGCTGACATTGTCACGGTGGGTGGCCGGATCCGCAACGTCCTCCTTATCGCTGCCAACGACCACCACAGCCTCGAGTCCGTTCATTTCCTTCAAAATGCCTTGAAATCTCTCCTTGAACGCTCCAATTCTAGCCTTACATCCAAGAGGAGGCGCCTTGTACTTCACCACAAATGA

Protein sequence

MDQSSELYRLLAQNGAFSLGGAGGSCGFPATQSMSSSSSYYPLDKSTTAAASEAAVPSAHDRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEIAELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADIVTVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK

Homology

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BLAST of CcUC10G198860.1 vs. NCBI nr
Match: XP_038905302.1 (transcription factor bHLH106 [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 1.9e-108
Identity = 221/233 (94.85%), Postives = 223/233 (95.71%), Query Frame = 0


Query: 2   DQSSELYRLLAQNGAFSLGGAGGSCGFPATQSMSSSSSYYP-LDKSTTAAASEAAVPSAH 61
           DQSSELYR LAQNGAFSLGGA GSC FPATQSMSSSSSYYP LDKS  AAA+E AVPS H
Sbjct: 5   DQSSELYRFLAQNGAFSLGGAAGSCRFPATQSMSSSSSYYPNLDKSPAAAATEGAVPSPH 64

Query: 62  DRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSE 121
           DRAL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSE
Sbjct: 65  DRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSE 124

Query: 122 IAELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRAD 181
           IAELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSL LKTLRAD
Sbjct: 125 IAELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLHLKTLRAD 184

Query: 182 IVTVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLH 234
           IVTVGGRIRNVLLIAANDHHS+ESVHFLQNALKSLLERSNSSLTSKRRRLVLH
Sbjct: 185 IVTVGGRIRNVLLIAANDHHSVESVHFLQNALKSLLERSNSSLTSKRRRLVLH 237

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BLAST of CcUC10G198860.1 vs. NCBI nr
Match: XP_008464948.1 (PREDICTED: transcription factor bHLH106-like [Cucumis melo] >KAA0057222.1 transcription factor bHLH106-like protein [Cucumis melo var. makuwa] >TYK18740.1 transcription factor bHLH106-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 1.7e-96
Identity = 207/239 (86.61%), Postives = 213/239 (89.12%), Query Frame = 0


Query: 3   QSSELYRLLAQNGAFSLGGAGGSCGFP-----ATQSMS-SSSSYYPLDKSTTAAASEAAV 62
           QSSELYRLLAQ GAFSLGGA     FP      TQ+MS SSSSYYPLD + +      A 
Sbjct: 11  QSSELYRLLAQTGAFSLGGA----AFPPPPATTTQTMSNSSSSYYPLDNNKSPPG--VAA 70

Query: 63  PSAHDRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN 122
           PS HDRAL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN
Sbjct: 71  PSPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN 130

Query: 123 ETSEIAELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKT 182
           ET EIAELESFPSETDEISVLSGE+SEDGRLVFKASLCCEDRSDLIPDLNDILNSL LKT
Sbjct: 131 ETLEIAELESFPSETDEISVLSGEKSEDGRLVFKASLCCEDRSDLIPDLNDILNSLHLKT 190

Query: 183 LRADIVTVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 236
           LRADIVTVGGRIRNVLLIAANDHHS+ESVHFLQNALKSL+ERSNSSLTSKRRRLVLHHK
Sbjct: 191 LRADIVTVGGRIRNVLLIAANDHHSIESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 243

[Close]

BLAST of CcUC10G198860.1 vs. NCBI nr
Match: XP_004141200.1 (transcription factor bHLH106 [Cucumis sativus] >KGN59724.1 hypothetical protein Csa_001752 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 1.7e-96
Identity = 201/233 (86.27%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 3   QSSELYRLLAQNGAFSLGGAGGSCGFPATQSMSSSSSYYPLDKSTTAAASEAAVPSAHDR 62
           QSSELYRLLAQ GAF+LGG        +TQ+MSSSSSYYPLD + +      A P+ HDR
Sbjct: 13  QSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQG--VAAPTPHDR 72

Query: 63  ALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEIA 122
           AL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNET EIA
Sbjct: 73  ALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEIA 132

Query: 123 ELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADIV 182
           ELESFPSETDEISVLSGE+SEDGRL+FKASLCCEDRSDLIPDLNDILNSL LKTLRADIV
Sbjct: 133 ELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIV 192

Query: 183 TVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 236
           TVGGRIRNVLLIAANDHHS+ESVHFLQNALKSL+ERSNSSLTSKRRRLVLHHK
Sbjct: 193 TVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 243

[Close]

BLAST of CcUC10G198860.1 vs. NCBI nr
Match: XP_022973344.1 (transcription factor bHLH106 [Cucurbita maxima])

HSP 1 Score: 355.9 bits (912), Expect = 2.6e-94
Identity = 192/234 (82.05%), Postives = 214/234 (91.45%), Query Frame = 0


Query: 2   DQSSELYRLLAQNGAFSLGGAGGSCGFPATQSMSSSSSYYPLDKSTTAAASEAAVPSAHD 61
           D+S ELYR LAQN  F + GA GSC FPA QS+S+SSSY+PL++S  AAA+E  +PS HD
Sbjct: 5   DESCELYRFLAQNKGFRVRGASGSCSFPAPQSLSTSSSYFPLNES-AAAATETTLPSPHD 64

Query: 62  RALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEI 121
           RAL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELK++T++I
Sbjct: 65  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKHQTADI 124

Query: 122 AELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADI 181
           AELE+FPSE+DEISVLSGE+S+DGRL+FKASLCCEDRSDLIP+LNDILNSLQLKT+RADI
Sbjct: 125 AELETFPSESDEISVLSGEESDDGRLLFKASLCCEDRSDLIPELNDILNSLQLKTVRADI 184

Query: 182 VTVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 236
           VTVGGRIRNVLLIAAN HHSLES+HFLQNALKSLLERSN S  SKRRRLV+ HK
Sbjct: 185 VTVGGRIRNVLLIAANHHHSLESLHFLQNALKSLLERSNCSDRSKRRRLVIAHK 237

[Close]

BLAST of CcUC10G198860.1 vs. NCBI nr
Match: XP_022944313.1 (transcription factor bHLH106 isoform X1 [Cucurbita moschata])

HSP 1 Score: 355.1 bits (910), Expect = 4.5e-94
Identity = 192/234 (82.05%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 2   DQSSELYRLLAQNGAFSLGGAGGSCGFPATQSMSSSSSYYPLDKSTTAAASEAAVPSAHD 61
           D+S ELYR LAQN  F   G  GSC FPA QS+S+SSSY+PL++S  AAA+E A+PS HD
Sbjct: 5   DESCELYRFLAQNKGFRQRGGSGSCSFPAAQSLSTSSSYFPLNES-AAAATETALPSPHD 64

Query: 62  RALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEI 121
           RAL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELK++T++I
Sbjct: 65  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKHQTADI 124

Query: 122 AELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADI 181
           AELE+FPSE+DEISVLSGE+S+DGRL+FKASLCCEDRSDLIP+LNDILNSLQLKT+RADI
Sbjct: 125 AELETFPSESDEISVLSGEESDDGRLLFKASLCCEDRSDLIPELNDILNSLQLKTVRADI 184

Query: 182 VTVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 236
           VTVGGRIRNVLLIAAN HHSLES+HFLQNALKSLLERSN S  SKRRRLV+ HK
Sbjct: 185 VTVGGRIRNVLLIAANHHHSLESLHFLQNALKSLLERSNCSDRSKRRRLVIAHK 237

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy Swiss-Prot
Match: O80674 (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.5e-57
Identity = 144/250 (57.60%), Postives = 174/250 (69.60%), Query Frame = 0


Query: 7   LYRLLAQNGAFSLGGAGGSC---GFPATQ-----SMSSSSSYYPLDKSTTAAASEAAVPS 66
           LY  LA N      G GG C    +  T      S SS+SSYYPL      A S      
Sbjct: 10  LYSFLAGNEV----GGGGYCVSGDYMTTMQSLCGSSSSTSSYYPL------AISGIGETM 69

Query: 67  AHDRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNET 126
           A DRAL AL+NHKEAE+RRRERINSHL+KLR +L CNSKTDKA+LLAKVV+RV+ELK +T
Sbjct: 70  AQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQT 129

Query: 127 SEIAELES--FPSETDEISVLS-GEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLK 186
            E ++ +    PSETDEISVL  G+ S DG ++FKASLCCEDRSDL+PDL +IL SL +K
Sbjct: 130 LETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMK 189

Query: 187 TLRADIVTVGGRIRNVLLIAAN-DHHSLESVHFLQNALKSLLERSNSSL----------- 234
           TLRA++VT+GGR R+VL++AA+ + H +ESVHFLQNALKSLLERS+ SL           
Sbjct: 190 TLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSSGGGGGE 249

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy Swiss-Prot
Match: Q9LET0 (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.0e-48
Identity = 109/182 (59.89%), Postives = 145/182 (79.67%), Query Frame = 0


Query: 46  STTAAASEAAVPSAHDRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLA 105
           +T  ++S+       D+AL +L+NHKEAE++RR RINSHL+KLR LL CNSKTDK++LLA
Sbjct: 25  TTVTSSSDPFATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLA 84

Query: 106 KVVERVKELKNETSEIAELESFPSETDEISVLSGE---QSEDGRLVFKASLCCEDRSDLI 165
           KVV+RVKELK +T EI + E+ PSETDEISVL+ E   + +D R++FK S CCEDR +L+
Sbjct: 85  KVVQRVKELKQQTLEITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELL 144

Query: 166 PDLNDILNSLQLKTLRADIVTVGGRIRNVLLIAAN-DHHSLESVHFLQNALKSLLERSNS 224
            DL + L SLQ++TL AD+ TVGGR RNVL++AA+ +HH ++SV+FLQNALKSLLERS+ 
Sbjct: 145 KDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSSK 204

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy Swiss-Prot
Match: Q9S7Y1 (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.1e-40
Identity = 95/185 (51.35%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 62  RALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEI 121
           +AL A K+H EAE+RRRERIN+HL KLR++LP  +KTDKASLLA+V++ VKELK ETS I
Sbjct: 170 KALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVI 229

Query: 122 AELESFPSETDEISVLSGEQSE--DGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRA 181
           +E    P+E+DE++V   E+ E  DGR V KASLCCEDRSDL+PD+   L +++LKTL+A
Sbjct: 230 SETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKA 289

Query: 182 DIVTVGGRIRNVLLIAANDHHSLE-----SVHFLQNALKSLLERSN-----SSLTSKRRR 235
           +I TVGGR++NVL +   +    E      +  ++ ALK+++E+SN     SS  +KR+R
Sbjct: 290 EITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQR 349

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy Swiss-Prot
Match: Q9LS08 (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.3e-34
Identity = 72/134 (53.73%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 62  RALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEI 121
           +AL A K+H EAE+RRRERIN+HL KLR++LP  +KTDKASLLA+V++ +KELK +TS+I
Sbjct: 128 KALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQI 187

Query: 122 AELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADI 181
            +    P+E D+++V S    E+G LV +AS CC+DR+DL+ D+ + L SL+L+TL+A+I
Sbjct: 188 TDTYQVPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEI 247

Query: 182 VTVGGRIRNVLLIA 196
            TVGGR++N+L ++
Sbjct: 248 ATVGGRVKNILFLS 261

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy Swiss-Prot
Match: Q9XEF0 (Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.5e-26
Identity = 73/173 (42.20%), Postives = 114/173 (65.90%), Query Frame = 0


Query: 61  DRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSE 120
           ++A +  ++H+ AEKRRR+RINSHL  LR L+P + K DKA+LLA V+E+VKELK + +E
Sbjct: 58  EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117

Query: 121 IAELESFPSETDEISV----LSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKT 180
               +  P+E DE++V    +S  +S    ++FKAS CCED+ + I ++  +L  LQL+T
Sbjct: 118 SPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLET 177

Query: 181 LRADIVTVGGRIR-NVLLIAANDHHSLE---SVHFLQNALKSLLERSNSSLTS 226
           ++A+I++VGGR+R N +L  +N + +     S   L+ +L S L R  SS T+
Sbjct: 178 IQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTT 230

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy TrEMBL
Match: A0A5A7UMY8 (Transcription factor bHLH106-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00430 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.0e-97
Identity = 207/239 (86.61%), Postives = 213/239 (89.12%), Query Frame = 0


Query: 3   QSSELYRLLAQNGAFSLGGAGGSCGFP-----ATQSMS-SSSSYYPLDKSTTAAASEAAV 62
           QSSELYRLLAQ GAFSLGGA     FP      TQ+MS SSSSYYPLD + +      A 
Sbjct: 11  QSSELYRLLAQTGAFSLGGA----AFPPPPATTTQTMSNSSSSYYPLDNNKSPPG--VAA 70

Query: 63  PSAHDRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN 122
           PS HDRAL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN
Sbjct: 71  PSPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN 130

Query: 123 ETSEIAELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKT 182
           ET EIAELESFPSETDEISVLSGE+SEDGRLVFKASLCCEDRSDLIPDLNDILNSL LKT
Sbjct: 131 ETLEIAELESFPSETDEISVLSGEKSEDGRLVFKASLCCEDRSDLIPDLNDILNSLHLKT 190

Query: 183 LRADIVTVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 236
           LRADIVTVGGRIRNVLLIAANDHHS+ESVHFLQNALKSL+ERSNSSLTSKRRRLVLHHK
Sbjct: 191 LRADIVTVGGRIRNVLLIAANDHHSIESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 243

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy TrEMBL
Match: A0A0A0LFL0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G841480 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.0e-97
Identity = 201/233 (86.27%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 3   QSSELYRLLAQNGAFSLGGAGGSCGFPATQSMSSSSSYYPLDKSTTAAASEAAVPSAHDR 62
           QSSELYRLLAQ GAF+LGG        +TQ+MSSSSSYYPLD + +      A P+ HDR
Sbjct: 13  QSSELYRLLAQTGAFTLGGPAFPPPPASTQTMSSSSSYYPLDNNKSPQG--VAAPTPHDR 72

Query: 63  ALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEIA 122
           AL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNET EIA
Sbjct: 73  ALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETLEIA 132

Query: 123 ELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADIV 182
           ELESFPSETDEISVLSGE+SEDGRL+FKASLCCEDRSDLIPDLNDILNSL LKTLRADIV
Sbjct: 133 ELESFPSETDEISVLSGEKSEDGRLLFKASLCCEDRSDLIPDLNDILNSLHLKTLRADIV 192

Query: 183 TVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 236
           TVGGRIRNVLLIAANDHHS+ESVHFLQNALKSL+ERSNSSLTSKRRRLVLHHK
Sbjct: 193 TVGGRIRNVLLIAANDHHSVESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 243

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy TrEMBL
Match: A0A1S3CMN2 (transcription factor bHLH106-like OS=Cucumis melo OX=3656 GN=LOC103502694 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.0e-97
Identity = 207/239 (86.61%), Postives = 213/239 (89.12%), Query Frame = 0


Query: 3   QSSELYRLLAQNGAFSLGGAGGSCGFP-----ATQSMS-SSSSYYPLDKSTTAAASEAAV 62
           QSSELYRLLAQ GAFSLGGA     FP      TQ+MS SSSSYYPLD + +      A 
Sbjct: 11  QSSELYRLLAQTGAFSLGGA----AFPPPPATTTQTMSNSSSSYYPLDNNKSPPG--VAA 70

Query: 63  PSAHDRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN 122
           PS HDRAL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN
Sbjct: 71  PSPHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKN 130

Query: 123 ETSEIAELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKT 182
           ET EIAELESFPSETDEISVLSGE+SEDGRLVFKASLCCEDRSDLIPDLNDILNSL LKT
Sbjct: 131 ETLEIAELESFPSETDEISVLSGEKSEDGRLVFKASLCCEDRSDLIPDLNDILNSLHLKT 190

Query: 183 LRADIVTVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 236
           LRADIVTVGGRIRNVLLIAANDHHS+ESVHFLQNALKSL+ERSNSSLTSKRRRLVLHHK
Sbjct: 191 LRADIVTVGGRIRNVLLIAANDHHSIESVHFLQNALKSLIERSNSSLTSKRRRLVLHHK 243

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy TrEMBL
Match: A0A6J1IEB0 (transcription factor bHLH106 OS=Cucurbita maxima OX=3661 GN=LOC111471900 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.3e-94
Identity = 192/234 (82.05%), Postives = 214/234 (91.45%), Query Frame = 0


Query: 2   DQSSELYRLLAQNGAFSLGGAGGSCGFPATQSMSSSSSYYPLDKSTTAAASEAAVPSAHD 61
           D+S ELYR LAQN  F + GA GSC FPA QS+S+SSSY+PL++S  AAA+E  +PS HD
Sbjct: 5   DESCELYRFLAQNKGFRVRGASGSCSFPAPQSLSTSSSYFPLNES-AAAATETTLPSPHD 64

Query: 62  RALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEI 121
           RAL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELK++T++I
Sbjct: 65  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKHQTADI 124

Query: 122 AELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADI 181
           AELE+FPSE+DEISVLSGE+S+DGRL+FKASLCCEDRSDLIP+LNDILNSLQLKT+RADI
Sbjct: 125 AELETFPSESDEISVLSGEESDDGRLLFKASLCCEDRSDLIPELNDILNSLQLKTVRADI 184

Query: 182 VTVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 236
           VTVGGRIRNVLLIAAN HHSLES+HFLQNALKSLLERSN S  SKRRRLV+ HK
Sbjct: 185 VTVGGRIRNVLLIAANHHHSLESLHFLQNALKSLLERSNCSDRSKRRRLVIAHK 237

[Close]

BLAST of CcUC10G198860.1 vs. ExPASy TrEMBL
Match: A0A6J1FXX8 (transcription factor bHLH106 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448792 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.2e-94
Identity = 192/234 (82.05%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 2   DQSSELYRLLAQNGAFSLGGAGGSCGFPATQSMSSSSSYYPLDKSTTAAASEAAVPSAHD 61
           D+S ELYR LAQN  F   G  GSC FPA QS+S+SSSY+PL++S  AAA+E A+PS HD
Sbjct: 5   DESCELYRFLAQNKGFRQRGGSGSCSFPAAQSLSTSSSYFPLNES-AAAATETALPSPHD 64

Query: 62  RALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEI 121
           RAL ALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELK++T++I
Sbjct: 65  RALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKHQTADI 124

Query: 122 AELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADI 181
           AELE+FPSE+DEISVLSGE+S+DGRL+FKASLCCEDRSDLIP+LNDILNSLQLKT+RADI
Sbjct: 125 AELETFPSESDEISVLSGEESDDGRLLFKASLCCEDRSDLIPELNDILNSLQLKTVRADI 184

Query: 182 VTVGGRIRNVLLIAANDHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 236
           VTVGGRIRNVLLIAAN HHSLES+HFLQNALKSLLERSN S  SKRRRLV+ HK
Sbjct: 185 VTVGGRIRNVLLIAANHHHSLESLHFLQNALKSLLERSNCSDRSKRRRLVIAHK 237

[Close]

BLAST of CcUC10G198860.1 vs. TAIR 10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-58
Identity = 144/250 (57.60%), Postives = 174/250 (69.60%), Query Frame = 0


Query: 7   LYRLLAQNGAFSLGGAGGSC---GFPATQ-----SMSSSSSYYPLDKSTTAAASEAAVPS 66
           LY  LA N      G GG C    +  T      S SS+SSYYPL      A S      
Sbjct: 10  LYSFLAGNEV----GGGGYCVSGDYMTTMQSLCGSSSSTSSYYPL------AISGIGETM 69

Query: 67  AHDRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNET 126
           A DRAL AL+NHKEAE+RRRERINSHL+KLR +L CNSKTDKA+LLAKVV+RV+ELK +T
Sbjct: 70  AQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQT 129

Query: 127 SEIAELES--FPSETDEISVLS-GEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLK 186
            E ++ +    PSETDEISVL  G+ S DG ++FKASLCCEDRSDL+PDL +IL SL +K
Sbjct: 130 LETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMK 189

Query: 187 TLRADIVTVGGRIRNVLLIAAN-DHHSLESVHFLQNALKSLLERSNSSL----------- 234
           TLRA++VT+GGR R+VL++AA+ + H +ESVHFLQNALKSLLERS+ SL           
Sbjct: 190 TLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSSGGGGGE 249

[Close]

BLAST of CcUC10G198860.1 vs. TAIR 10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 194.9 bits (494), Expect = 7.3e-50
Identity = 109/182 (59.89%), Postives = 145/182 (79.67%), Query Frame = 0


Query: 46  STTAAASEAAVPSAHDRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLA 105
           +T  ++S+       D+AL +L+NHKEAE++RR RINSHL+KLR LL CNSKTDK++LLA
Sbjct: 25  TTVTSSSDPFATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLA 84

Query: 106 KVVERVKELKNETSEIAELESFPSETDEISVLSGE---QSEDGRLVFKASLCCEDRSDLI 165
           KVV+RVKELK +T EI + E+ PSETDEISVL+ E   + +D R++FK S CCEDR +L+
Sbjct: 85  KVVQRVKELKQQTLEITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELL 144

Query: 166 PDLNDILNSLQLKTLRADIVTVGGRIRNVLLIAAN-DHHSLESVHFLQNALKSLLERSNS 224
            DL + L SLQ++TL AD+ TVGGR RNVL++AA+ +HH ++SV+FLQNALKSLLERS+ 
Sbjct: 145 KDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSSK 204

[Close]

BLAST of CcUC10G198860.1 vs. TAIR 10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 166.0 bits (419), Expect = 3.6e-41
Identity = 95/185 (51.35%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 62  RALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEI 121
           +AL A K+H EAE+RRRERIN+HL KLR++LP  +KTDKASLLA+V++ VKELK ETS I
Sbjct: 170 KALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVI 229

Query: 122 AELESFPSETDEISVLSGEQSE--DGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRA 181
           +E    P+E+DE++V   E+ E  DGR V KASLCCEDRSDL+PD+   L +++LKTL+A
Sbjct: 230 SETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKA 289

Query: 182 DIVTVGGRIRNVLLIAANDHHSLE-----SVHFLQNALKSLLERSN-----SSLTSKRRR 235
           +I TVGGR++NVL +   +    E      +  ++ ALK+++E+SN     SS  +KR+R
Sbjct: 290 EITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQR 349

[Close]

BLAST of CcUC10G198860.1 vs. TAIR 10
Match: AT3G25710.1 (basic helix-loop-helix 32 )

HSP 1 Score: 145.2 bits (365), Expect = 6.6e-35
Identity = 72/134 (53.73%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 62  RALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEI 121
           +AL A K+H EAE+RRRERIN+HL KLR++LP  +KTDKASLLA+V++ +KELK +TS+I
Sbjct: 128 KALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQI 187

Query: 122 AELESFPSETDEISVLSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADI 181
            +    P+E D+++V S    E+G LV +AS CC+DR+DL+ D+ + L SL+L+TL+A+I
Sbjct: 188 TDTYQVPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEI 247

Query: 182 VTVGGRIRNVLLIA 196
            TVGGR++N+L ++
Sbjct: 248 ATVGGRVKNILFLS 261

[Close]

BLAST of CcUC10G198860.1 vs. TAIR 10
Match: AT2G40200.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-27
Identity = 73/173 (42.20%), Postives = 114/173 (65.90%), Query Frame = 0


Query: 61  DRALTALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSE 120
           ++A +  ++H+ AEKRRR+RINSHL  LR L+P + K DKA+LLA V+E+VKELK + +E
Sbjct: 58  EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117

Query: 121 IAELESFPSETDEISV----LSGEQSEDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKT 180
               +  P+E DE++V    +S  +S    ++FKAS CCED+ + I ++  +L  LQL+T
Sbjct: 118 SPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLET 177

Query: 181 LRADIVTVGGRIR-NVLLIAANDHHSLE---SVHFLQNALKSLLERSNSSLTS 226
           ++A+I++VGGR+R N +L  +N + +     S   L+ +L S L R  SS T+
Sbjct: 178 IQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTT 230

The following BLAST results are available for this feature:

BLAST of CcUC10G198860.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905302.1	1.9e-108	94.85	transcription factor bHLH106 [Benincasa hispida]	[more]
XP_008464948.1	1.7e-96	86.61	PREDICTED: transcription factor bHLH106-like [Cucumis melo] >KAA0057222.1 transc...	[more]
XP_004141200.1	1.7e-96	86.27	transcription factor bHLH106 [Cucumis sativus] >KGN59724.1 hypothetical protein ...	[more]
XP_022973344.1	2.6e-94	82.05	transcription factor bHLH106 [Cucurbita maxima]	[more]
XP_022944313.1	4.5e-94	82.05	transcription factor bHLH106 isoform X1 [Cucurbita moschata]	[more]

BLAST of CcUC10G198860.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80674	3.5e-57	57.60	Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=...	[more]
Q9LET0	1.0e-48	59.89	Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107...	[more]
Q9S7Y1	5.1e-40	51.35	Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1	[more]
Q9LS08	9.3e-34	53.73	Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1	[more]
Q9XEF0	5.5e-26	42.20	Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1	[more]

BLAST of CcUC10G198860.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMY8	8.0e-97	86.61	Transcription factor bHLH106-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LFL0	8.0e-97	86.27	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G841480 PE=4 S...	[more]
A0A1S3CMN2	8.0e-97	86.61	transcription factor bHLH106-like OS=Cucumis melo OX=3656 GN=LOC103502694 PE=4 S...	[more]
A0A6J1IEB0	1.3e-94	82.05	transcription factor bHLH106 OS=Cucurbita maxima OX=3661 GN=LOC111471900 PE=4 SV...	[more]
A0A6J1FXX8	2.2e-94	82.05	transcription factor bHLH106 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of CcUC10G198860.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41130.1	2.5e-58	57.60	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56770.1	7.3e-50	59.89	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68810.1	3.6e-41	51.35	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G25710.1	6.6e-35	53.73	basic helix-loop-helix 32	[more]
AT2G40200.1	3.9e-27	42.20	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 71..120 e-value: 3.9E-12 score: 56.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 69..114 e-value: 3.5E-12 score: 46.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 65..114 score: 15.687918
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 60..125 e-value: 3.1E-15 score: 57.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 69..127
None	No IPR available	PANTHER	PTHR45844	TRANSCRIPTION FACTOR BHLH30	coord: 4..233
None	No IPR available	PANTHER	PTHR45844:SF19	TRANSCRIPTION FACTOR BHLH106-RELATED	coord: 4..233
None	No IPR available	CDD	cd11455	bHLH_AtAIG1_like	coord: 61..136 e-value: 1.3462E-34 score: 117.009

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G198860	CcUC10G198860	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G198860.1-exon	CcUC10G198860.1-exon-CicolChr10:25665695..25666234	exon
CcUC10G198860.1-exon	CcUC10G198860.1-exon-CicolChr10:25667073..25667395	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G198860.1-three_prime_utr	CcUC10G198860.1-three_prime_utr-CicolChr10:25665695..25665817	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G198860.1-cds	CcUC10G198860.1-cds-CicolChr10:25665818..25666234	CDS
CcUC10G198860.1-cds	CcUC10G198860.1-cds-CicolChr10:25667073..25667363	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G198860.1-five_prime_utr	CcUC10G198860.1-five_prime_utr-CicolChr10:25667364..25667395	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G198860.1	CcUC10G198860.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity