CcUC10G197820.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G197820.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Calcium-binding EF-hand
Location	CicolChr10: 24475104 .. 24475532 (-)
Sequence length	429
RNA-Seq Expression	CcUC10G197820.1
Synteny	CcUC10G197820.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGGTCGTAATCGACGGATCGACGGTGAGGAACTTCGTGAACGACGAATCTCACTTCAAGAAGAGCGTTGACGAAGCCTTCGCCGCTCTTGATCTCAACAAAGACGGCGTTCTCTCCCGATCCGAGCTGCGGAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTCGCTACTACGCCGGAACAACTCACTCAGCTCTACGATTCCATCTTCGAGCAGTTTGATTGTGACAAAAGCGGCAGCGTAGATGCGGAAGAGTTTCGGACGGAGATGAAGAACATCTTGCTCGCAATCGCCGATGGTTTAGGCTCGTCTCCGATTCAGATGGCGCTTGACGACGGCGATCAGAGTTTCCTTAAGCAAGCCGCGGATCTGGAGGCTTCCAAGCTCGCTCAATCGTCGACCTGA

mRNA sequence

ATGGCGGTGGTCGTAATCGACGGATCGACGGTGAGGAACTTCGTGAACGACGAATCTCACTTCAAGAAGAGCGTTGACGAAGCCTTCGCCGCTCTTGATCTCAACAAAGACGGCGTTCTCTCCCGATCCGAGCTGCGGAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTCGCTACTACGCCGGAACAACTCACTCAGCTCTACGATTCCATCTTCGAGCAGTTTGATTGTGACAAAAGCGGCAGCGTAGATGCGGAAGAGTTTCGGACGGAGATGAAGAACATCTTGCTCGCAATCGCCGATGGTTTAGGCTCGTCTCCGATTCAGATGGCGCTTGACGACGGCGATCAGAGTTTCCTTAAGCAAGCCGCGGATCTGGAGGCTTCCAAGCTCGCTCAATCGTCGACCTGA

Coding sequence (CDS)

ATGGCGGTGGTCGTAATCGACGGATCGACGGTGAGGAACTTCGTGAACGACGAATCTCACTTCAAGAAGAGCGTTGACGAAGCCTTCGCCGCTCTTGATCTCAACAAAGACGGCGTTCTCTCCCGATCCGAGCTGCGGAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTCGCTACTACGCCGGAACAACTCACTCAGCTCTACGATTCCATCTTCGAGCAGTTTGATTGTGACAAAAGCGGCAGCGTAGATGCGGAAGAGTTTCGGACGGAGATGAAGAACATCTTGCTCGCAATCGCCGATGGTTTAGGCTCGTCTCCGATTCAGATGGCGCTTGACGACGGCGATCAGAGTTTCCTTAAGCAAGCCGCGGATCTGGAGGCTTCCAAGCTCGCTCAATCGTCGACCTGA

Protein sequence

MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSST

Homology

[Close]

BLAST of CcUC10G197820.1 vs. NCBI nr
Match: XP_038905172.1 (uncharacterized protein LOC120091281 [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 9.8e-68
Identity = 137/142 (96.48%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKS+DEAFAALDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSIDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV TTPEQLTQLYDSIFEQFDCDKSG+VDA+EFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVTTTPEQLTQLYDSIFEQFDCDKSGTVDADEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLEASKLAQSST
Sbjct: 121 GDQSFLKQAADLEASKLAQSST 142

[Close]

BLAST of CcUC10G197820.1 vs. NCBI nr
Match: KAE8650949.1 (hypothetical protein Csa_002692 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66
Identity = 134/142 (94.37%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDESHF KS+D+AFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 64  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 123

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSG+VDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 124 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 183

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLEASKL QSST
Sbjct: 184 GDQSFLKQAADLEASKLRQSST 205

[Close]

BLAST of CcUC10G197820.1 vs. NCBI nr
Match: XP_004153292.1 (uncharacterized protein LOC101213961 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66
Identity = 134/142 (94.37%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDESHF KS+D+AFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSG+VDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLEASKL QSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]

BLAST of CcUC10G197820.1 vs. NCBI nr
Match: XP_022983603.1 (uncharacterized protein LOC111482160 [Cucurbita maxima] >XP_022983604.1 uncharacterized protein LOC111482160 [Cucurbita maxima])

HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66
Identity = 136/141 (96.45%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFEQFDCDKSG+VDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 142
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of CcUC10G197820.1 vs. NCBI nr
Match: XP_023526874.1 (uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.5 bits (667), Expect = 4.1e-66
Identity = 135/141 (95.74%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFEQFDCDKSG+VDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 142
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of CcUC10G197820.1 vs. ExPASy TrEMBL
Match: A0A6J1J7W5 (uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 8.9e-67
Identity = 136/141 (96.45%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFEQFDCDKSG+VDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 142
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of CcUC10G197820.1 vs. ExPASy TrEMBL
Match: A0A0A0L9X6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 8.9e-67
Identity = 134/142 (94.37%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDESHF KS+D+AFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSG+VDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GDQSFLKQAADLEASKL QSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]

BLAST of CcUC10G197820.1 vs. ExPASy TrEMBL
Match: A0A6J1F6Q4 (uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC111441377 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 135/141 (95.74%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFE+FDCDKSG+VDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 142
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of CcUC10G197820.1 vs. ExPASy TrEMBL
Match: A0A5A7UE76 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00320 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.4e-66
Identity = 133/142 (93.66%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+D+AFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSG+VDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of CcUC10G197820.1 vs. ExPASy TrEMBL
Match: A0A1S3CGR2 (uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.4e-66
Identity = 133/142 (93.66%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+D+AFA+LDLN DGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSG+VDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of CcUC10G197820.1 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 211.1 bits (536), Expect = 5.9e-55
Identity = 107/142 (75.35%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           M VV+IDGSTVR+FV+DE  FKKSVDE FAALDLNKDGVLSRSELRKAFE++RL+E+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T  ++LT LYDSIFE+FD D+SGSVD EEFR+EMK I+LAIADGLGS PI M LDD
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 GDQSFLKQAADLEASKLAQSST 143
            D +FLK+AADLEASKL ++S+
Sbjct: 121 DDDNFLKKAADLEASKLEKASS 142

[Close]

BLAST of CcUC10G197820.1 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 39/122 (31.97%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           M   VI   T+  F++D   F+   ++ F  LDL+K+G+LS SELR+    +  +E+   
Sbjct: 1   MIETVITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESE-- 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMAL-D 120
                  ++   +Y++IFE+F  D    +  + FR  +  IL A+A G+G+SP+ M + +
Sbjct: 61  ---VAPGDETDNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHN 113

Query: 121 DG 122
           DG
Sbjct: 121 DG 113

[Close]

BLAST of CcUC10G197820.1 vs. TAIR 10
Match: AT5G28830.1 (calcium-binding EF hand family protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.2e-09
Identity = 34/119 (28.57%), Postives = 56/119 (47.06%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFG 60
           + V ++DG+ ++ F+ DE  F    +  F  LD    G L +SE+RKA         H G
Sbjct: 101 IVVSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKAL-------VHMG 160

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALD 120
           V++   P     + D I ++ D D    +   +F   ++ +L  IAD L   PI + L+
Sbjct: 161 VEMGVPPLSEFPILDDIIKKHDADSDEELGQAQFAELLQQVLQEIADVLHEKPITIVLN 212

[Close]

BLAST of CcUC10G197820.1 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 58.5 bits (140), Expect = 4.9e-09
Identity = 37/118 (31.36%), Postives = 56/118 (47.46%), Query Frame = 0


Query: 5   VIDGSTVRNFVNDESHFKKSVDEAFAALDLNKDGVLSRSELRKAFETLRLIETHFGVDVA 64
           V+DGS +   V +E  F K V++ F  LD ++DG LS +EL+ A      I    G+   
Sbjct: 14  VLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVAD---IGAALGLPAQ 73

Query: 65  TTPEQLTQLYDSIFEQFDCDKSGSVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGD 123
            T      +Y  +  +F       V   EF+  + +ILL +A GL   PI +   DG+
Sbjct: 74  GTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGE 128

The following BLAST results are available for this feature:

BLAST of CcUC10G197820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905172.1	9.8e-68	96.48	uncharacterized protein LOC120091281 [Benincasa hispida]	[more]
KAE8650949.1	1.8e-66	94.37	hypothetical protein Csa_002692 [Cucumis sativus]	[more]
XP_004153292.1	1.8e-66	94.37	uncharacterized protein LOC101213961 [Cucumis sativus]	[more]
XP_022983603.1	1.8e-66	96.45	uncharacterized protein LOC111482160 [Cucurbita maxima] >XP_022983604.1 uncharac...	[more]
XP_023526874.1	4.1e-66	95.74	uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC10G197820.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G197820.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J7W5	8.9e-67	96.45	uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160...	[more]
A0A0A0L9X6	8.9e-67	94.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1	[more]
A0A6J1F6Q4	2.6e-66	95.74	uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]
A0A5A7UE76	4.4e-66	93.66	Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CGR2	4.4e-66	93.66	uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=...	[more]

BLAST of CcUC10G197820.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	5.9e-55	75.35	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	1.3e-09	31.97	Calcium-binding EF hand family protein	[more]
AT5G28830.1	2.2e-09	28.57	calcium-binding EF hand family protein	[more]
AT4G38810.2	4.9e-09	31.36	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 24..52 e-value: 0.0051 score: 26.0 coord: 73..101 e-value: 0.047 score: 22.8
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 27..98 e-value: 1.3E-10 score: 41.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 20..55 score: 11.779655
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 10.803317
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 25..99 e-value: 9.39003E-8 score: 44.4609
None	No IPR available	GENE3D	1.10.238.10		coord: 8..104 e-value: 2.5E-15 score: 58.7
None	No IPR available	PANTHER	PTHR34574:SF5	CALCIUM-BINDING EF-HAND FAMILY PROTEIN	coord: 1..139
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..139
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 10..101

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G197820	CcUC10G197820	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G197820.1-exon	CcUC10G197820.1-exon-CicolChr10:24475104..24475532	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G197820.1-cds	CcUC10G197820.1-cds-CicolChr10:24475104..24475532	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G197820.1	CcUC10G197820.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding