CcUC10G197440.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G197440.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Cellulose synthase
Location	CicolChr10: 24040778 .. 24043044 (+)
Sequence length	695
RNA-Seq Expression	CcUC10G197440.1
Synteny	CcUC10G197440.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGCATTCAGTGAAAAGGAAATTTAATTCGTTTCTGAATTTTCTGTTTGTTTCTCGGGAAAAAGAAATGGCTCTTGGTGAGGAACCGATTCTCTCTCGGTTGGACCGGCTGGATAATATGGTGAGTTTGTTTTCAGCTTACAATGAAAATTCAAAATTCCAATTAAGATTGAAAAAAATGATTTTTTTTTTCATTTTTTTTTTCTTCTCCTTTTGTTGTGAATATGTTCTTGTGCGGACAAGGTGGGGAAAATGATGGGTTTTGATGTTTGTTTCTCGGGAAAATGAGTGGGAAAATGAGAAGAGTTGGTTGGTGAGAGATTCGTGGCTTAGCTGCATGGGCTGTCTAATTTTTCTTTTTTAATTATTCTGAATTTCATGATTCGTTTTGTAATTTTGATGTAGATGTTTATTTCTTTGTTTGTTTGTTTATTTATTTATTATTGTGTTGTTTAAAAATTATGGAGTAGAATGCTTTCTTCTAATATGGTCGGTGTAATTTTAAGAACGTCCATCTCAATCAATCTACTTCTTACGAATCAAATAGTTTTGAGAGTTCTAGTGAGTGAAGGATTGAAGTCATAGAGAGAGTTTGAAAGTCTTTGTGGATGTTAAAATTACTTTTTTTCATCTTCATCACTAAAAATAGGCCTTTAATCACTTAAATTTTAATTTCTATTTAAATTTACATTTCAAATACAAATTTAATGACTAAACGACACGGCTTATTGTTTCAAAATATGACAAATAAATAGAAACATAGGTCCAAGATATTGTAGTTTTTATATGTACTTAGATAGCAAATTCATTAATAGGTAGGGAGCATTATTGTGAGTATGTAGTTCGTAATAACCTTTTGTAAGGTTAAGATTTGATTAGTTTATGGATGAGTACTGTTTTTTAAAAATATGATAATAATGATAATAAAATCCAACAATTCACATAAATGTCTTAGTTTGTTTTTTAAAATAAAAAAATAAAAATAAAAACCTATATTATAGAAGGGACTTAAAAATCAGAATGAATACAACTTCATATTAGAATTTGAAGTTCAAAGAAAATGCACAAGTTTTAATTAGAGGACTGCCTTGCAATTTGAGTATTTCCCAATTATTTGTATTATTGCAATTAATTGATAAGAAGGCACCGACTAAAATTTTAAGTTTCGAGAAGGTGAAAAATGGGAAGTATTGGGTGTTCTTTTAAATTTTATATTTATAAGAAAGAAAGGAAGGAAGAAAGAAATAAATAAATAAATAAATAAAAGAAGATATAACTGTAATAGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGAAAGTCTCCAAAAAGCTCATGTGCATCCACTCCATCAAGTGGGACCCTGACGAGCGATTATCACACATCGTCCGTTGATCTCTCACCAAAAAGTCTGGAGAAGCACTGCCGTCCGATCAACCACGTCGTCAAAGTTGCTGAACTCAAAGGAAGCCTCGTCGACAGAATGGATAAGTTAGAGGATAGAGTCCTCAAGGTAAAAAAAAAAAAAAAAAAGAAAGTAGATTAAAATATTGATGTTCCTATTGCACGGCTATTTCTTAAATTCTCACATATAAAAATTATTTTAATTATTCGTACTTCTCAACTAAGTAGTTTACAAATATTTTGGGGGCGTTTAGGGCTTGAATTCGTTATAAGATATAAATAGTATTTTTCTGGTTAGAATATCATATTTTTACATTTATTGGAGAATTAATAGGTGGGAATGGAGTTTGAATTTCCAAGTTTTTTTTATTTTTATTTTTTAAAGGTTAATTTCATTTTTCTTCTTTCTGGTTTCTGAACTCTAGAATTTACTAGATATATGTGATGGATTTATGCACTTGGAATCTTAAATTTGTGTTTTCATTTCTAAGCTCTTTTTGTGTTGGATATTAAACAGCTTTGTCTACAAGTGGAAGGAGAGATAGAAAGGGAGAGGGAGATGATAATGGTTGAGAAGAACAAGAAGAAACCTAAGAAGAGCTTTAAACAACTTGTTCAACAGTGTATGACCGGACAGGGAACACGTGAGTCGTGGTCTTGATCTGATTATATTATATTTTTCGTTTTTTGTTTCTTGCTTTTTTGAATTCTGTTTAGATGGATAAGTTCGTTTTGTTTCTAATCACTTGTAGGATCTTTTAGATCTCTGTGGAAGATGTTTATAAAAATTTTGATGGTTTTTGTCATACTTGTCCATTAATATATGGGTTATATTTAACTAAGCCCTCTATTTCAACATGGG

mRNA sequence

TTTTGCATTCAGTGAAAAGGAAATTTAATTCGTTTCTGAATTTTCTGTTTGTTTCTCGGGAAAAAGAAATGGCTCTTGGTGAGGAACCGATTCTCTCTCGGTTGGACCGGCTGGATAATATGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGAAAGTCTCCAAAAAGCTCATGTGCATCCACTCCATCAAGTGGGACCCTGACGAGCGATTATCACACATCGTCCGTTGATCTCTCACCAAAAAGTCTGGAGAAGCACTGCCGTCCGATCAACCACGTCGTCAAAGTTGCTGAACTCAAAGGAAGCCTCGTCGACAGAATGGATAAGTTAGAGGATAGAGTCCTCAAGCTTTGTCTACAAGTGGAAGGAGAGATAGAAAGGGAGAGGGAGATGATAATGGTTGAGAAGAACAAGAAGAAACCTAAGAAGAGCTTTAAACAACTTGTTCAACAGTGTATGACCGGACAGGGAACACGTGAGTCGTGGTCTTGATCTGATTATATTATATTTTTCGTTTTTTGTTTCTTGCTTTTTTGAATTCTGTTTAGATGGATAAGTTCGTTTTGTTTCTAATCACTTGTAGGATCTTTTAGATCTCTGTGGAAGATGTTTATAAAAATTTTGATGGTTTTTGTCATACTTGTCCATTAATATATGGGTTATATTTAACTAAGCCCTCTATTTCAACATGGG

Coding sequence (CDS)

ATGGCTCTTGGTGAGGAACCGATTCTCTCTCGGTTGGACCGGCTGGATAATATGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGAAAGTCTCCAAAAAGCTCATGTGCATCCACTCCATCAAGTGGGACCCTGACGAGCGATTATCACACATCGTCCGTTGATCTCTCACCAAAAAGTCTGGAGAAGCACTGCCGTCCGATCAACCACGTCGTCAAAGTTGCTGAACTCAAAGGAAGCCTCGTCGACAGAATGGATAAGTTAGAGGATAGAGTCCTCAAGCTTTGTCTACAAGTGGAAGGAGAGATAGAAAGGGAGAGGGAGATGATAATGGTTGAGAAGAACAAGAAGAAACCTAAGAAGAGCTTTAAACAACTTGTTCAACAGTGTATGACCGGACAGGGAACACGTGAGTCGTGGTCTTGA

Protein sequence

MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMVEKNKKKPKKSFKQLVQQCMTGQGTRESWS

Homology

[Close]

BLAST of CcUC10G197440.1 vs. NCBI nr
Match: XP_038905600.1 (uncharacterized protein LOC120091575 [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 128/139 (92.09%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           MA+GEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPK 
Sbjct: 1   MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKC 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMVEKNKKKPK 120
           LEKHCRPINHV+KVAELKGSLV+RMD LEDRVLKLC+QVEGEIEREREM++VEKNKK  K
Sbjct: 61  LEKHCRPINHVIKVAELKGSLVERMDNLEDRVLKLCVQVEGEIEREREMMIVEKNKKH-K 120

Query: 121 KSFKQLVQQCMTGQGTRES 140
           KSFKQLVQQCMTGQGTR+S
Sbjct: 121 KSFKQLVQQCMTGQGTRKS 138

[Close]

BLAST of CcUC10G197440.1 vs. NCBI nr
Match: XP_004151057.1 (uncharacterized protein LOC101205386 [Cucumis sativus] >KGN58589.1 hypothetical protein Csa_001276 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 2.3e-61
Identity = 125/142 (88.03%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           MA+ EEPILSRLDRLD MLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS
Sbjct: 1   MAVAEEPILSRLDRLDVMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMVEKNKKKPK 120
           LEKHCRPINHVVKVAELKGSLV+RMD LEDRVLKLC+QVEG++ERE++MIMVEK ++KPK
Sbjct: 61  LEKHCRPINHVVKVAELKGSLVERMDNLEDRVLKLCIQVEGDLEREKDMIMVEKKERKPK 120

Query: 121 KSFKQLVQQCMTGQGT-RESWS 142
           +SFKQLVQ+CMTGQGT R+SWS
Sbjct: 121 RSFKQLVQRCMTGQGTRRDSWS 142

[Close]

BLAST of CcUC10G197440.1 vs. NCBI nr
Match: XP_008461800.1 (PREDICTED: uncharacterized protein LOC103500315 [Cucumis melo] >KAA0048356.1 uncharacterized protein E6C27_scaffold264G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 244.6 bits (623), Expect = 5.2e-61
Identity = 126/143 (88.11%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           MA+ EEPILSRLDRLDNMLRRLEEI+GC KSPKSSCASTPSSGTLTSDYHTSSVDLSPKS
Sbjct: 1   MAVAEEPILSRLDRLDNMLRRLEEIKGCAKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMV-EKNKKKP 120
           LEKHCRPINHVV+VAELKGSLV+RMD LEDRVLKLC+QVEGE+ERE++M+MV +K KKKP
Sbjct: 61  LEKHCRPINHVVRVAELKGSLVERMDNLEDRVLKLCIQVEGEMEREKDMVMVDQKKKKKP 120

Query: 121 KKSFKQLVQQCMTGQG-TRESWS 142
           KKSFKQLVQQCMTGQG TR+SWS
Sbjct: 121 KKSFKQLVQQCMTGQGTTRDSWS 143

[Close]

BLAST of CcUC10G197440.1 vs. NCBI nr
Match: KAG6606879.1 (hypothetical protein SDJN03_00221, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230.7 bits (587), Expect = 7.7e-57
Identity = 118/137 (86.13%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           M + EEPILSRL+RLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDY TSSVDLSPK+
Sbjct: 1   MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKT 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMVEKNKKKPK 120
           LEKHCRPINHVVKV EL+GSLV+RMD +EDRVLKLCLQ+EGEIERE+EMIMVEK+ KKPK
Sbjct: 61  LEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIEGEIEREKEMIMVEKD-KKPK 120

Query: 121 KSFKQLVQQCMTGQGTR 138
           KSFKQL+Q C TGQG R
Sbjct: 121 KSFKQLIQLCATGQGIR 136

[Close]

BLAST of CcUC10G197440.1 vs. NCBI nr
Match: XP_022152667.1 (uncharacterized protein LOC111020329 [Momordica charantia])

HSP 1 Score: 229.2 bits (583), Expect = 2.2e-56
Identity = 119/140 (85.00%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           MA+ EEPILSRLDRLDN+LRRLEEIRGCGKSPKSSC STPSSGTLTSDYHTSSVDLSPKS
Sbjct: 1   MAVAEEPILSRLDRLDNILRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKS 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMV-EKN-KKK 120
           LEKHCRPI++V+K+ E+KGSLV RMD +EDRVLKLCLQ+EGEIERERE +MV EKN KKK
Sbjct: 61  LEKHCRPISNVIKITEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKKKK 120

Query: 121 PKKSFKQLVQQCMTGQGTRE 139
           PKKSFKQLVQ+CMTGQG R+
Sbjct: 121 PKKSFKQLVQRCMTGQGIRD 140

[Close]

BLAST of CcUC10G197440.1 vs. ExPASy TrEMBL
Match: A0A0A0LCD9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G695850 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 125/142 (88.03%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           MA+ EEPILSRLDRLD MLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS
Sbjct: 1   MAVAEEPILSRLDRLDVMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMVEKNKKKPK 120
           LEKHCRPINHVVKVAELKGSLV+RMD LEDRVLKLC+QVEG++ERE++MIMVEK ++KPK
Sbjct: 61  LEKHCRPINHVVKVAELKGSLVERMDNLEDRVLKLCIQVEGDLEREKDMIMVEKKERKPK 120

Query: 121 KSFKQLVQQCMTGQGT-RESWS 142
           +SFKQLVQ+CMTGQGT R+SWS
Sbjct: 121 RSFKQLVQRCMTGQGTRRDSWS 142

[Close]

BLAST of CcUC10G197440.1 vs. ExPASy TrEMBL
Match: A0A5A7U299 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00740 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61
Identity = 126/143 (88.11%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           MA+ EEPILSRLDRLDNMLRRLEEI+GC KSPKSSCASTPSSGTLTSDYHTSSVDLSPKS
Sbjct: 1   MAVAEEPILSRLDRLDNMLRRLEEIKGCAKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMV-EKNKKKP 120
           LEKHCRPINHVV+VAELKGSLV+RMD LEDRVLKLC+QVEGE+ERE++M+MV +K KKKP
Sbjct: 61  LEKHCRPINHVVRVAELKGSLVERMDNLEDRVLKLCIQVEGEMEREKDMVMVDQKKKKKP 120

Query: 121 KKSFKQLVQQCMTGQG-TRESWS 142
           KKSFKQLVQQCMTGQG TR+SWS
Sbjct: 121 KKSFKQLVQQCMTGQGTTRDSWS 143

[Close]

BLAST of CcUC10G197440.1 vs. ExPASy TrEMBL
Match: A0A1S3CFF4 (uncharacterized protein LOC103500315 OS=Cucumis melo OX=3656 GN=LOC103500315 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61
Identity = 126/143 (88.11%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           MA+ EEPILSRLDRLDNMLRRLEEI+GC KSPKSSCASTPSSGTLTSDYHTSSVDLSPKS
Sbjct: 1   MAVAEEPILSRLDRLDNMLRRLEEIKGCAKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMV-EKNKKKP 120
           LEKHCRPINHVV+VAELKGSLV+RMD LEDRVLKLC+QVEGE+ERE++M+MV +K KKKP
Sbjct: 61  LEKHCRPINHVVRVAELKGSLVERMDNLEDRVLKLCIQVEGEMEREKDMVMVDQKKKKKP 120

Query: 121 KKSFKQLVQQCMTGQG-TRESWS 142
           KKSFKQLVQQCMTGQG TR+SWS
Sbjct: 121 KKSFKQLVQQCMTGQGTTRDSWS 143

[Close]

BLAST of CcUC10G197440.1 vs. ExPASy TrEMBL
Match: A0A6J1DGX0 (uncharacterized protein LOC111020329 OS=Momordica charantia OX=3673 GN=LOC111020329 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 119/140 (85.00%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           MA+ EEPILSRLDRLDN+LRRLEEIRGCGKSPKSSC STPSSGTLTSDYHTSSVDLSPKS
Sbjct: 1   MAVAEEPILSRLDRLDNILRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKS 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMV-EKN-KKK 120
           LEKHCRPI++V+K+ E+KGSLV RMD +EDRVLKLCLQ+EGEIERERE +MV EKN KKK
Sbjct: 61  LEKHCRPISNVIKITEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKKKK 120

Query: 121 PKKSFKQLVQQCMTGQGTRE 139
           PKKSFKQLVQ+CMTGQG R+
Sbjct: 121 PKKSFKQLVQRCMTGQGIRD 140

[Close]

BLAST of CcUC10G197440.1 vs. ExPASy TrEMBL
Match: A0A6J1KAC7 (uncharacterized protein LOC111493115 OS=Cucurbita maxima OX=3661 GN=LOC111493115 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.1e-56
Identity = 117/135 (86.67%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKS 60
           M + +EPILSRL+RLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDY TSSVDLSPK+
Sbjct: 1   MGVADEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYLTSSVDLSPKT 60

Query: 61  LEKHCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREMIMVEKNKKKPK 120
           LEKHCRPINHVVKV EL+GSLV+RMD +EDRVLKLCLQ EGEIE+E+EMIMVEK+ KKPK
Sbjct: 61  LEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQTEGEIEKEKEMIMVEKD-KKPK 120

Query: 121 KSFKQLVQQCMTGQG 136
           KSFKQLVQ CMTGQG
Sbjct: 121 KSFKQLVQLCMTGQG 134

[Close]

BLAST of CcUC10G197440.1 vs. TAIR 10
Match: AT1G07985.1 (Expressed protein )

HSP 1 Score: 100.9 bits (250), Expect = 8.6e-22
Identity = 65/124 (52.42%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 1   MALGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDL-SPK 60
           MA+ EEPILSRLDR+D M+R+LEE++  G SP+SS  STPSSGT       SS+DL SP+
Sbjct: 1   MAVVEEPILSRLDRIDFMVRKLEEMK--GSSPRSSSPSTPSSGT-----QPSSMDLSSPR 60

Query: 61  SLEK-HCRPINHVVKVAELKGSLVDRMDKLEDRVLKLCLQVEGEIEREREM-IMVEKNKK 120
           S+ K HCR +  V +  E KG+L++R++ +E++VLKLC Q E E+E ER+     +K KK
Sbjct: 61  SIGKVHCRSMEQVREETERKGTLLERLNNVEEQVLKLCSQFEEEVEEERKREDKTDKEKK 117

Query: 121 KPKK 122
            PKK
Sbjct: 121 TPKK 117

The following BLAST results are available for this feature:

BLAST of CcUC10G197440.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905600.1	1.0e-61	92.09	uncharacterized protein LOC120091575 [Benincasa hispida]	[more]
XP_004151057.1	2.3e-61	88.03	uncharacterized protein LOC101205386 [Cucumis sativus] >KGN58589.1 hypothetical ...	[more]
XP_008461800.1	5.2e-61	88.11	PREDICTED: uncharacterized protein LOC103500315 [Cucumis melo] >KAA0048356.1 unc...	[more]
KAG6606879.1	7.7e-57	86.13	hypothetical protein SDJN03_00221, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022152667.1	2.2e-56	85.00	uncharacterized protein LOC111020329 [Momordica charantia]	[more]

BLAST of CcUC10G197440.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G197440.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCD9	1.1e-61	88.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G695850 PE=4 SV=1	[more]
A0A5A7U299	2.5e-61	88.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3CFF4	2.5e-61	88.11	uncharacterized protein LOC103500315 OS=Cucumis melo OX=3656 GN=LOC103500315 PE=...	[more]
A0A6J1DGX0	1.1e-56	85.00	uncharacterized protein LOC111020329 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1KAC7	4.1e-56	86.67	uncharacterized protein LOC111493115 OS=Cucurbita maxima OX=3661 GN=LOC111493115...	[more]

BLAST of CcUC10G197440.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07985.1	8.6e-22	52.42	Expressed protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..55
None	No IPR available	PANTHER	PTHR34190	EXPRESSED PROTEIN	coord: 4..137
None	No IPR available	PANTHER	PTHR34190:SF4	EXPRESSED PROTEIN	coord: 4..137

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G197440	CcUC10G197440	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G197440.1-exon	CcUC10G197440.1-exon-CicolChr10:24040778..24040899	exon
CcUC10G197440.1-exon	CcUC10G197440.1-exon-CicolChr10:24042064..24042291	exon
CcUC10G197440.1-exon	CcUC10G197440.1-exon-CicolChr10:24042700..24043044	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G197440.1-five_prime_utr	CcUC10G197440.1-five_prime_utr-CicolChr10:24040778..24040845	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G197440.1-cds	CcUC10G197440.1-cds-CicolChr10:24040846..24040899	CDS
CcUC10G197440.1-cds	CcUC10G197440.1-cds-CicolChr10:24042064..24042291	CDS
CcUC10G197440.1-cds	CcUC10G197440.1-cds-CicolChr10:24042700..24042843	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G197440.1-three_prime_utr	CcUC10G197440.1-three_prime_utr-CicolChr10:24042844..24043044	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G197440.1	CcUC10G197440.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0009833	plant-type primary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity
molecular_function	GO:0046872	metal ion binding