CcUC10G196090.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G196090.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	AB hydrolase-1 domain-containing protein
Location	CicolChr10: 21978802 .. 21979101 (+)
Sequence length	300
RNA-Seq Expression	CcUC10G196090.1
Synteny	CcUC10G196090.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGTTGCAGAACTTGGGAGCTGACTGCATTGAGGGCGAAAGCACAGGTCCCAGTGCCGGTGAAGTTCATCGTCGGGGATTTGGATCTGACCTACCATGTTCCAGGAGTCGAGGAATATTATATCCACAATGGCGGATTCAAGAAGGACGTGCCGTTTCTGGAGGAAGTGGTTGTAATGAAAGATAGTGCCCACTTCATCAACCAAGAAAGGCCACGTGAAATCAATACTCACATCCATGACTTTTATCAAAGAATTCTGAACTTCATCCCATTCTCCCTTGCTGTTACTTTCTGA

mRNA sequence

ATGTTTTGTTGCAGAACTTGGGAGCTGACTGCATTGAGGGCGAAAGCACAGGTCCCAGTGCCGGTGAAGTTCATCGTCGGGGATTTGGATCTGACCTACCATGTTCCAGGAGTCGAGGAATATTATATCCACAATGGCGGATTCAAGAAGGACGTGCCGTTTCTGGAGGAAGTGGTTGTAATGAAAGATAGTGCCCACTTCATCAACCAAGAAAGGCCACGTGAAATCAATACTCACATCCATGACTTTTATCAAAGAATTCTGAACTTCATCCCATTCTCCCTTGCTGTTACTTTCTGA

Coding sequence (CDS)

ATGTTTTGTTGCAGAACTTGGGAGCTGACTGCATTGAGGGCGAAAGCACAGGTCCCAGTGCCGGTGAAGTTCATCGTCGGGGATTTGGATCTGACCTACCATGTTCCAGGAGTCGAGGAATATTATATCCACAATGGCGGATTCAAGAAGGACGTGCCGTTTCTGGAGGAAGTGGTTGTAATGAAAGATAGTGCCCACTTCATCAACCAAGAAAGGCCACGTGAAATCAATACTCACATCCATGACTTTTATCAAAGAATTCTGAACTTCATCCCATTCTCCCTTGCTGTTACTTTCTGA

Protein sequence

MFCCRTWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSAHFINQERPREINTHIHDFYQRILNFIPFSLAVTF

Homology

[Close]

BLAST of CcUC10G196090.1 vs. NCBI nr
Match: XP_023528763.1 (uncharacterized protein LOC111791601 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28
Identity = 65/81 (80.25%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA   KAQV VPVKFIVGDLDLTY  PG +E YIHNGGFKKDVPFLEEV+VMKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIVGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVIVMKDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP EI+THIHDF ++
Sbjct: 296 HFINQERPHEISTHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. NCBI nr
Match: XP_022934345.1 (uncharacterized protein LOC111441538 [Cucurbita moschata] >KAG6581272.1 hypothetical protein SDJN03_21274, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017999.1 ephA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 136.3 bits (342), Expect = 1.4e-28
Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA   KAQV VPVKFI+GDLDLTY  PG +E YIHNGGFKKDVPFLEEV+VMKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIIGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVIVMKDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP EI+THIHDF ++
Sbjct: 296 HFINQERPHEISTHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. NCBI nr
Match: XP_022984060.1 (uncharacterized protein LOC111482484 [Cucurbita maxima])

HSP 1 Score: 135.6 bits (340), Expect = 2.4e-28
Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA   KAQV VPVKFIVGDLDLTY  PG +E YIHNGGFKKDVPFLEEV++MKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIVGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVILMKDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP EI+THIHDF ++
Sbjct: 296 HFINQERPHEISTHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. NCBI nr
Match: XP_008454330.1 (PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis melo] >TYK29511.1 bifunctional epoxide hydrolase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 6.9e-28
Identity = 64/81 (79.01%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA   KAQV VPVKFIVGDLDLTYH PG +E YIHNGGFK DVPFLEEVVVM+D+A
Sbjct: 236 TWELTASWNKAQVQVPVKFIVGDLDLTYHFPGAKE-YIHNGGFKTDVPFLEEVVVMEDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP EI+ HIHDF ++
Sbjct: 296 HFINQERPHEISAHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. NCBI nr
Match: XP_022155318.1 (uncharacterized protein LOC111022450 [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-27
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA    AQ+ VPVKF+VGDLD+TYH  G +E YIHNGGFKKDVPFLEEVVVMKD+A
Sbjct: 236 TWELTAPWTGAQIQVPVKFVVGDLDMTYHFAGAKE-YIHNGGFKKDVPFLEEVVVMKDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP+EI+THIHDF ++
Sbjct: 296 HFINQERPQEISTHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. ExPASy TrEMBL
Match: A0A6J1F7F3 (uncharacterized protein LOC111441538 OS=Cucurbita moschata OX=3662 GN=LOC111441538 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.7e-29
Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA   KAQV VPVKFI+GDLDLTY  PG +E YIHNGGFKKDVPFLEEV+VMKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIIGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVIVMKDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP EI+THIHDF ++
Sbjct: 296 HFINQERPHEISTHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. ExPASy TrEMBL
Match: A0A6J1J7M9 (uncharacterized protein LOC111482484 OS=Cucurbita maxima OX=3661 GN=LOC111482484 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.1e-28
Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA   KAQV VPVKFIVGDLDLTY  PG +E YIHNGGFKKDVPFLEEV++MKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIVGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVILMKDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP EI+THIHDF ++
Sbjct: 296 HFINQERPHEISTHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. ExPASy TrEMBL
Match: A0A5D3E1N5 (Bifunctional epoxide hydrolase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001130 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.3e-28
Identity = 64/81 (79.01%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA   KAQV VPVKFIVGDLDLTYH PG +E YIHNGGFK DVPFLEEVVVM+D+A
Sbjct: 236 TWELTASWNKAQVQVPVKFIVGDLDLTYHFPGAKE-YIHNGGFKTDVPFLEEVVVMEDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP EI+ HIHDF ++
Sbjct: 296 HFINQERPHEISAHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. ExPASy TrEMBL
Match: A0A1S3BXV2 (bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494764 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.3e-28
Identity = 64/81 (79.01%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA   KAQV VPVKFIVGDLDLTYH PG +E YIHNGGFK DVPFLEEVVVM+D+A
Sbjct: 236 TWELTASWNKAQVQVPVKFIVGDLDLTYHFPGAKE-YIHNGGFKTDVPFLEEVVVMEDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP EI+ HIHDF ++
Sbjct: 296 HFINQERPHEISAHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. ExPASy TrEMBL
Match: A0A6J1DMN0 (uncharacterized protein LOC111022450 OS=Momordica charantia OX=3673 GN=LOC111022450 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.7e-28
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWELTA    AQ+ VPVKF+VGDLD+TYH  G +E YIHNGGFKKDVPFLEEVVVMKD+A
Sbjct: 236 TWELTAPWTGAQIQVPVKFVVGDLDMTYHFAGAKE-YIHNGGFKKDVPFLEEVVVMKDTA 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HFINQERP+EI+THIHDF ++
Sbjct: 296 HFINQERPQEISTHIHDFIKK 315

[Close]

BLAST of CcUC10G196090.1 vs. TAIR 10
Match: AT4G15955.3 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.4e-23
Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 5   RTWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDS 64
           RTWEL    + A+V VPVKFI+GD DLTYH+PG ++ YIH+G FK  VP L+EVVV+K  
Sbjct: 223 RTWELMGSLSNAKVKVPVKFIIGDQDLTYHIPGSKK-YIHDGRFKSHVPLLDEVVVIKGV 282

Query: 65  AHFINQERPREINTHIHDFY 85
            HFI++ERP EI+ HIHD++
Sbjct: 283 GHFIHEERPDEISKHIHDYF 301

[Close]

BLAST of CcUC10G196090.1 vs. TAIR 10
Match: AT4G02340.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-23
Identity = 47/81 (58.02%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 6   TWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           +WELTA     Q+ VPVKFIVGDLD+TY++PG +E YIH GG KK VPFL+EVVVM+   
Sbjct: 236 SWELTAPWTGLQIKVPVKFIVGDLDITYNIPGTKE-YIHEGGLKKHVPFLQEVVVMEGVG 295

Query: 66  HFINQERPREINTHIHDFYQR 87
           HF++QE+P E+  HI+ F+++
Sbjct: 296 HFLHQEKPDEVTDHIYGFFKK 315

[Close]

BLAST of CcUC10G196090.1 vs. TAIR 10
Match: AT4G15960.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-22
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 5   RTWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDS 64
           R WELTA    A++ VPVKFI+GD DLTY+ PG +E YI+ GGFK+DVP L+E VV+K  
Sbjct: 293 RNWELTAPWTGAKIRVPVKFIIGDQDLTYNFPGAKE-YINGGGFKRDVPLLDETVVLKGL 352

Query: 65  AHFINQERPREINTHIHDFYQRIL 89
            HF+++E P  IN HIH+F+ + L
Sbjct: 353 GHFLHEENPDVINQHIHNFFHKFL 375

[Close]

BLAST of CcUC10G196090.1 vs. TAIR 10
Match: AT3G05600.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-22
Identity = 43/81 (53.09%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 7   WELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDSAH 66
           WELTA    A++ VPVKF+ GD D+ Y  PG++E YIH GGF  DVP L+E+VV++D+ H
Sbjct: 245 WELTAPWTGAKIQVPVKFMTGDFDMVYTTPGMKE-YIHGGGFAADVPTLQEIVVIEDAGH 304

Query: 67  FINQERPREINTHIHDFYQRI 88
           F+NQE+P+E+  HI+DF+ ++
Sbjct: 305 FVNQEKPQEVTAHINDFFTKL 324

[Close]

BLAST of CcUC10G196090.1 vs. TAIR 10
Match: AT2G26740.1 (soluble epoxide hydrolase )

HSP 1 Score: 85.5 bits (210), Expect = 2.6e-17
Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 5   RTWELTALRAKAQVPVPVKFIVGDLDLTYHVPGVEEYYIHNGGFKKDVPFLEEVVVMKDS 64
           R  EL      +++ VP KF++G+LDL Y++PGV+E YIH   FK+DVP LEE VVM+  
Sbjct: 240 RNNELLGPWVGSKIQVPTKFVIGELDLVYYMPGVKE-YIHGPQFKEDVPLLEEPVVMEGV 299

Query: 65  AHFINQERPREINTHIHDFYQR 87
           AHFINQE+P+EI   I DF  +
Sbjct: 300 AHFINQEKPQEILQIILDFISK 320

The following BLAST results are available for this feature:

BLAST of CcUC10G196090.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528763.1	1.1e-28	80.25	uncharacterized protein LOC111791601 [Cucurbita pepo subsp. pepo]	[more]
XP_022934345.1	1.4e-28	79.01	uncharacterized protein LOC111441538 [Cucurbita moschata] >KAG6581272.1 hypothet...	[more]
XP_022984060.1	2.4e-28	79.01	uncharacterized protein LOC111482484 [Cucurbita maxima]	[more]
XP_008454330.1	6.9e-28	79.01	PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis melo] >TYK29511.1 bifu...	[more]
XP_022155318.1	1.2e-27	76.54	uncharacterized protein LOC111022450 [Momordica charantia]	[more]

BLAST of CcUC10G196090.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G196090.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7F3	6.7e-29	79.01	uncharacterized protein LOC111441538 OS=Cucurbita moschata OX=3662 GN=LOC1114415...	[more]
A0A6J1J7M9	1.1e-28	79.01	uncharacterized protein LOC111482484 OS=Cucurbita maxima OX=3661 GN=LOC111482484...	[more]
A0A5D3E1N5	3.3e-28	79.01	Bifunctional epoxide hydrolase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BXV2	3.3e-28	79.01	bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494764 PE...	[more]
A0A6J1DMN0	5.7e-28	76.54	uncharacterized protein LOC111022450 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of CcUC10G196090.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15955.3	2.4e-23	60.00	alpha/beta-Hydrolases superfamily protein	[more]
AT4G02340.1	3.2e-23	58.02	alpha/beta-Hydrolases superfamily protein	[more]
AT4G15960.1	1.2e-22	55.95	alpha/beta-Hydrolases superfamily protein	[more]
AT3G05600.1	2.1e-22	53.09	alpha/beta-Hydrolases superfamily protein	[more]
AT2G26740.1	2.6e-17	52.44	soluble epoxide hydrolase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000639	Epoxide hydrolase-like	PRINTS	PR00412	EPOXHYDRLASE	coord: 61..83 score: 38.34 coord: 20..36 score: 38.5
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 2..89 e-value: 2.1E-16 score: 62.5
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 10..83
None	No IPR available	PANTHER	PTHR43329:SF98	SUBFAMILY NOT NAMED	coord: 6..85
None	No IPR available	PANTHER	PTHR43329	EPOXIDE HYDROLASE	coord: 6..85

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G196090	CcUC10G196090	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G196090.1-exon	CcUC10G196090.1-exon-CicolChr10:21978802..21979101	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G196090.1-cds	CcUC10G196090.1-cds-CicolChr10:21978802..21979101	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G196090.1	CcUC10G196090.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009820	alkaloid metabolic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016787	hydrolase activity