CcUC10G193880.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G193880.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	zinc-finger homeodomain protein 1-like
Location	CicolChr10: 15881440 .. 15882030 (+)
Sequence length	591
RNA-Seq Expression	CcUC10G193880.1
Synteny	CcUC10G193880.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTGGAGGATCACGAAAAAGAAGACATGAAAATAGTAGAACCACCACCAAACTACATCAACAAAATCCACCCACTTTCCCGGCACACAAAAAACCCATCTCCGGTCCACTCGAACCCCATCATATACAACTACAAAGAATGCTTAAAAAATCACGCCGTCGCCGTCGGCGGTCACGCCCTCGACGGGTGCGGCGAGTTCATGCCCAGCGGACCGCACGGCTCTCTCGACGCCCTCAAATGTGCTGCCTGCCACTGCCACCGCAACTTCCACCGCAAAGACATCACTGACGACGGCGGCGTCAACGGAGAATCAGGGTCGCAGTACATTTCGTACTGGCGTGCTCCGAGGATGCTGGCGCTGCCTTCTTCGTCGTCGGCAAGGAAGCGAGTGAGGACGAAGTTCACGGAGGAGCAGAAGGAGAAGATGGTGGAGATGGCGGAGAAAATGGAGTGGCGGATTCAGAAGAAGGATGAAGCGGCGGTGATGGAATTCTGCAATGAAATCGGCGTGAAGCGGCGAGTGTTGAAGGTTTGGATGCATAACAACAAGAACACGTTTCGTAGTAAGGAATCCAAACAAAACTAA

mRNA sequence

ATGGAGTTGGAGGATCACGAAAAAGAAGACATGAAAATAGTAGAACCACCACCAAACTACATCAACAAAATCCACCCACTTTCCCGGCACACAAAAAACCCATCTCCGGTCCACTCGAACCCCATCATATACAACTACAAAGAATGCTTAAAAAATCACGCCGTCGCCGTCGGCGGTCACGCCCTCGACGGGTGCGGCGAGTTCATGCCCAGCGGACCGCACGGCTCTCTCGACGCCCTCAAATGTGCTGCCTGCCACTGCCACCGCAACTTCCACCGCAAAGACATCACTGACGACGGCGGCGTCAACGGAGAATCAGGGTCGCAGTACATTTCGTACTGGCGTGCTCCGAGGATGCTGGCGCTGCCTTCTTCGTCGTCGGCAAGGAAGCGAGTGAGGACGAAGTTCACGGAGGAGCAGAAGGAGAAGATGGTGGAGATGGCGGAGAAAATGGAGTGGCGGATTCAGAAGAAGGATGAAGCGGCGGTGATGGAATTCTGCAATGAAATCGGCGTGAAGCGGCGAGTGTTGAAGGTTTGGATGCATAACAACAAGAACACGTTTCGTAGTAAGGAATCCAAACAAAACTAA

Coding sequence (CDS)

ATGGAGTTGGAGGATCACGAAAAAGAAGACATGAAAATAGTAGAACCACCACCAAACTACATCAACAAAATCCACCCACTTTCCCGGCACACAAAAAACCCATCTCCGGTCCACTCGAACCCCATCATATACAACTACAAAGAATGCTTAAAAAATCACGCCGTCGCCGTCGGCGGTCACGCCCTCGACGGGTGCGGCGAGTTCATGCCCAGCGGACCGCACGGCTCTCTCGACGCCCTCAAATGTGCTGCCTGCCACTGCCACCGCAACTTCCACCGCAAAGACATCACTGACGACGGCGGCGTCAACGGAGAATCAGGGTCGCAGTACATTTCGTACTGGCGTGCTCCGAGGATGCTGGCGCTGCCTTCTTCGTCGTCGGCAAGGAAGCGAGTGAGGACGAAGTTCACGGAGGAGCAGAAGGAGAAGATGGTGGAGATGGCGGAGAAAATGGAGTGGCGGATTCAGAAGAAGGATGAAGCGGCGGTGATGGAATTCTGCAATGAAATCGGCGTGAAGCGGCGAGTGTTGAAGGTTTGGATGCATAACAACAAGAACACGTTTCGTAGTAAGGAATCCAAACAAAACTAA

Protein sequence

MELEDHEKEDMKIVEPPPNYINKIHPLSRHTKNPSPVHSNPIIYNYKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGESGSQYISYWRAPRMLALPSSSSARKRVRTKFTEEQKEKMVEMAEKMEWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSKESKQN

Homology

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BLAST of CcUC10G193880.1 vs. NCBI nr
Match: XP_038905975.1 (zinc-finger homeodomain protein 10-like [Benincasa hispida])

HSP 1 Score: 341.7 bits (875), Expect = 4.3e-90
Identity = 175/207 (84.54%), Postives = 183/207 (88.41%), Query Frame = 0


Query: 1   MELEDHEKEDMKIVEPPPNYINKIHPLSRHTKNPSPVH---------SNPII--YNYKEC 60
           MELEDHE++DM+IVEPP NYI+KIHPLSR TKNPSPVH         SNPI+  YNYKEC
Sbjct: 1   MELEDHEEDDMEIVEPPSNYIDKIHPLSRFTKNPSPVHSNRPHLPSNSNPILYNYNYKEC 60

Query: 61  LKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGESGSQ 120
           LKNHAVAVGGHALDGC EFMP+GPHGSLDALKCAAC+CHRNFHR+DITDD    GESG Q
Sbjct: 61  LKNHAVAVGGHALDGCCEFMPAGPHGSLDALKCAACNCHRNFHRRDITDD----GESGPQ 120

Query: 121 YISYWRAPRMLALPSSSSARKRVRTKFTEEQKEKMVEMAEKMEWRIQKKDEAAVMEFCNE 180
           YISYWR PRMLALPSSS  RKRVRTKFTEEQKEKMVEMAEKMEWRIQKKDEAAVMEFCNE
Sbjct: 121 YISYWRGPRMLALPSSSPGRKRVRTKFTEEQKEKMVEMAEKMEWRIQKKDEAAVMEFCNE 180

Query: 181 IGVKRRVLKVWMHNNKNTFRSKESKQN 197
           IGVKRRVLKVWMHNNKNTFR KESK N
Sbjct: 181 IGVKRRVLKVWMHNNKNTFR-KESKHN 202

[Close]

BLAST of CcUC10G193880.1 vs. NCBI nr
Match: XP_022999794.1 (zinc-finger homeodomain protein 1-like [Cucurbita maxima])

HSP 1 Score: 266.2 bits (679), Expect = 2.3e-67
Identity = 149/225 (66.22%), Postives = 166/225 (73.78%), Query Frame = 0


Query: 1   MELEDHEKEDMKIVEPPPNYINKI-----HPLSRHTKNPSPVHSN-PIIYNYKECLKNHA 60
           M+ EDHE+E+   +E P NY   +      PLSR  K PSP+HSN P    YKECLKNHA
Sbjct: 1   MDFEDHEEEEDMEMEAPTNYDKPLLQTPPPPLSRLNKTPSPLHSNPPPPLLYKECLKNHA 60

Query: 61  VAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDIT--DDGG-------VNGE 120
           VA+GGHALDGCGEFMP+GP+GSLDALKCAAC+CHRNFHRKDIT  DD G        N  
Sbjct: 61  VAIGGHALDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTHDDNGESPPFILSNPP 120

Query: 121 SGSQYISYWRAP----------RMLALPSSSS----ARKRVRTKFTEEQKEKMVEMAEKM 180
             +Q++ YWRAP          RMLALPS SS     RKRVRTKFTEEQKEKM+ MAEK+
Sbjct: 121 PTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGGCRKRVRTKFTEEQKEKMLVMAEKL 180

Query: 181 EWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSKESKQN 197
           +WRIQK DEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR KES+ N
Sbjct: 181 DWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR-KESEHN 224

[Close]

BLAST of CcUC10G193880.1 vs. NCBI nr
Match: KAG7031305.1 (Zinc-finger homeodomain protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262.3 bits (669), Expect = 3.3e-66
Identity = 145/228 (63.60%), Postives = 166/228 (72.81%), Query Frame = 0


Query: 1   MELEDHEKEDMKIVEPPPNYINKI-------HPLSRHTKNPSPVHSNPIIYN-YKECLKN 60
           ME EDH++E+   +E P NY   +        PLSR  K PSP+HS+P     YKECLKN
Sbjct: 1   MEFEDHDEEEDMEMEAPTNYDKPLLQTPPPPPPLSRLNKTPSPLHSDPPPPPLYKECLKN 60

Query: 61  HAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGES------ 120
           HAV++GGH+LDGCGEFMP+GP+GSLDALKCAAC+CHRNFHRKDIT     NGES      
Sbjct: 61  HAVSIGGHSLDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTTNDDNGESPPFILS 120

Query: 121 ----GSQYISYWRAP----------RMLALPSSSS----ARKRVRTKFTEEQKEKMVEMA 180
                +Q++ YWRAP          RMLALPS SS     RKRVRTKFTEEQKEKM+ MA
Sbjct: 121 NPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGGCRKRVRTKFTEEQKEKMLVMA 180

Query: 181 EKMEWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSKESKQN 197
           EK++WRIQK DEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR K+S+ N
Sbjct: 181 EKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR-KDSEHN 227

[Close]

BLAST of CcUC10G193880.1 vs. NCBI nr
Match: XP_022941755.1 (zinc-finger homeodomain protein 1-like [Cucurbita moschata])

HSP 1 Score: 262.3 bits (669), Expect = 3.3e-66
Identity = 145/228 (63.60%), Postives = 166/228 (72.81%), Query Frame = 0


Query: 1   MELEDHEKEDMKIVEPPPNYINKI-------HPLSRHTKNPSPVHSNPIIYN-YKECLKN 60
           ME EDH++E+   +E P NY   +        PLSR  K PSP+HS+P     YKECLKN
Sbjct: 1   MEFEDHDEEEDMEMEAPTNYDKPLLQTPPPPPPLSRLNKTPSPLHSSPPPPPLYKECLKN 60

Query: 61  HAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGES------ 120
           HAV++GGH+LDGCGEFMP+GP+GSLDALKCAAC+CHRNFHRKDIT     NGES      
Sbjct: 61  HAVSIGGHSLDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTTNDDNGESPPFILS 120

Query: 121 ----GSQYISYWRAP----------RMLALPSSSS----ARKRVRTKFTEEQKEKMVEMA 180
                +Q++ YWRAP          RMLALPS SS     RKRVRTKFTEEQKEKM+ MA
Sbjct: 121 NPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGGCRKRVRTKFTEEQKEKMLVMA 180

Query: 181 EKMEWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSKESKQN 197
           EK++WRIQK DEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR K+S+ N
Sbjct: 181 EKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR-KDSEHN 227

[Close]

BLAST of CcUC10G193880.1 vs. NCBI nr
Match: KAG6600666.1 (Zinc-finger homeodomain protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.9 bits (668), Expect = 4.3e-66
Identity = 145/229 (63.32%), Postives = 166/229 (72.49%), Query Frame = 0


Query: 1   MELEDHEKEDMKIVEPPPNYINKI--------HPLSRHTKNPSPVHSNPIIYN-YKECLK 60
           ME EDH++E+   +E P NY   +         PLSR  K PSP+HS+P     YKECLK
Sbjct: 1   MEFEDHDEEEDMEMEAPTNYDKPLLQTPPPPPPPLSRLNKTPSPLHSDPPPPPLYKECLK 60

Query: 61  NHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGES----- 120
           NHAV++GGH+LDGCGEFMP+GP+GSLDALKCAAC+CHRNFHRKDIT     NGES     
Sbjct: 61  NHAVSIGGHSLDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTTNDDNGESPPFIL 120

Query: 121 -----GSQYISYWRAP----------RMLALPSSSS----ARKRVRTKFTEEQKEKMVEM 180
                 +Q++ YWRAP          RMLALPS SS     RKRVRTKFTEEQKEKM+ M
Sbjct: 121 SNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGGCRKRVRTKFTEEQKEKMLVM 180

Query: 181 AEKMEWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSKESKQN 197
           AEK++WRIQK DEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR K+S+ N
Sbjct: 181 AEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR-KDSEHN 228

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy Swiss-Prot
Match: Q6YXH5 (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD1 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.0e-39
Identity = 93/221 (42.08%), Postives = 115/221 (52.04%), Query Frame = 0


Query: 46  YKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGG---- 105
           Y+ECLKNHAV +GGHA+DGCGEFM +G  G++DAL+CAAC+CHRNFHRK+     G    
Sbjct: 57  YRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESESLAGEGSP 116

Query: 106 --------VNGESGSQYISYWRAP---------------------------RMLALPSSS 165
                          Q+  Y+R P                           R LALPS+S
Sbjct: 117 FSPAAVVPYGATPHHQFSPYYRTPAGYLHHHQHHMAAAAAAAAAAAGGYPQRPLALPSTS 176

Query: 166 ------------------------------------SARKRVRTKFTEEQKEKMVEMAEK 192
                                               S +KR RTKFT+EQK+KM+  AE+
Sbjct: 177 HSGRDDGDDLSGMVGPMSAVGPLSGMSLGAGPSGSGSGKKRFRTKFTQEQKDKMLAFAER 236

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy Swiss-Prot
Match: A2YWA6 (Zinc-finger homeodomain protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD2 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-38
Identity = 96/226 (42.48%), Postives = 114/226 (50.44%), Query Frame = 0


Query: 46  YKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGE 105
           Y+ECLKNHAV +GGHA+DGCGEFM SG  GS+DAL+CAAC CHRNFHRK+     GV   
Sbjct: 63  YRECLKNHAVGIGGHAVDGCGEFMASGEEGSIDALRCAACGCHRNFHRKESESPTGVGPA 122

Query: 106 SGS----------------QYISYWRAP----------------------------RMLA 165
             S                Q+  Y+R P                            R LA
Sbjct: 123 EPSAVSPAAISAYGASPHHQFSPYYRTPAGYLHHQQHQMAAAAAAAAAAAAGGYPQRPLA 182

Query: 166 LPSSS------------------------------------SARKRVRTKFTEEQKEKMV 192
           LPS+S                                    S +KR RTKFT+EQK+KM+
Sbjct: 183 LPSTSHSGRDEGDDMSGMVGPMVIGPMVGMSLGSAGPSGSGSGKKRFRTKFTQEQKDKML 242

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy Swiss-Prot
Match: Q6ZB90 (Zinc-finger homeodomain protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD2 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-38
Identity = 96/226 (42.48%), Postives = 114/226 (50.44%), Query Frame = 0


Query: 46  YKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGE 105
           Y+ECLKNHAV +GGHA+DGCGEFM SG  GS+DAL+CAAC CHRNFHRK+     GV   
Sbjct: 63  YRECLKNHAVGIGGHAVDGCGEFMASGEEGSIDALRCAACGCHRNFHRKESESPTGVGPA 122

Query: 106 SGS----------------QYISYWRAP----------------------------RMLA 165
             S                Q+  Y+R P                            R LA
Sbjct: 123 EPSAVSPAAISAYGASPHHQFSPYYRTPAGYLHHQQHQMAAAAAAAAAAAAGGYPQRPLA 182

Query: 166 LPSSS------------------------------------SARKRVRTKFTEEQKEKMV 192
           LPS+S                                    S +KR RTKFT+EQK+KM+
Sbjct: 183 LPSTSHSGRDEGDDMSGMVGPMVIGPMVGMSLGSAGPSGSGSGKKRFRTKFTQEQKDKML 242

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.3e-38
Identity = 97/223 (43.50%), Postives = 121/223 (54.26%), Query Frame = 0


Query: 1   MELEDHEKE-DMKIVEPPPNYINKIHPLSRHTKNPSPVHSNPI--IYNYKECLKNHAVAV 60
           M  ED E++ +M  V PP  Y +     +  +       S  +     Y+ECLKNHAV +
Sbjct: 1   MNFEDQEEDMEMSGVNPPCGYDSLSGEGATSSGGGGVGRSKGVGAKIRYRECLKNHAVNI 60

Query: 61  GGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGESGSQYISYWRAP 120
           GGHA+DGC EFMPSG  G+LDALKCAAC CHRNFHRK+    GG       +  +Y+  P
Sbjct: 61  GGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGG----RAHRVPTYYNRP 120

Query: 121 RMLALP-----------------------------SSSSARKRVRTKFTEEQKEKMVEMA 180
                P                             SS    KR RTKFT EQKEKM+  A
Sbjct: 121 PQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFRTKFTAEQKEKMLAFA 180

Query: 181 EKMEWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSK 192
           E++ WRIQK D+ AV +FC E GV+R+VLK+WMHNNKN+   K
Sbjct: 181 ERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSLGKK 219

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy Swiss-Prot
Match: A2Z259 (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD1 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.8e-38
Identity = 103/282 (36.52%), Postives = 133/282 (47.16%), Query Frame = 0


Query: 1   MELEDHEKEDMKIVEPPPNYINKIHP----------------LSRHTKNPSPVHSNPIIY 60
           M+ +DH+  D ++   P +   +  P                +  H K PS         
Sbjct: 1   MDFDDHDDGDEEMPPMPVSSSYETPPQHGLAGGGMAPKPPGEIGSHVKGPSCGGG----- 60

Query: 61  NYKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGG--- 120
            Y+ECLKNHAV +GGHA+DGCGEFM +G  G++DAL+CAAC+CHRNFHRK+     G   
Sbjct: 61  RYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESESLAGEGS 120

Query: 121 ---------VNGESGSQYISYWRAP---------------------------RMLALPSS 180
                           Q+  Y+R P                           R LALPS+
Sbjct: 121 PFSPAAVVPYGATPHHQFSPYYRTPAGYLHHHQHHMAAAAAAAAAAAGGHPQRPLALPST 180

Query: 181 S------------------------------------SARKRVRTKFTEEQKEKMVEMAE 192
           S                                    S +KR RTKFT+EQK+KM+  AE
Sbjct: 181 SHSGRDDGDDLSGMVGPMSAVGPLSGMSLGAGPSGSGSGKKRFRTKFTQEQKDKMLAFAE 240

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy TrEMBL
Match: A0A6J1KI40 (zinc-finger homeodomain protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494049 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 149/225 (66.22%), Postives = 166/225 (73.78%), Query Frame = 0


Query: 1   MELEDHEKEDMKIVEPPPNYINKI-----HPLSRHTKNPSPVHSN-PIIYNYKECLKNHA 60
           M+ EDHE+E+   +E P NY   +      PLSR  K PSP+HSN P    YKECLKNHA
Sbjct: 1   MDFEDHEEEEDMEMEAPTNYDKPLLQTPPPPLSRLNKTPSPLHSNPPPPLLYKECLKNHA 60

Query: 61  VAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDIT--DDGG-------VNGE 120
           VA+GGHALDGCGEFMP+GP+GSLDALKCAAC+CHRNFHRKDIT  DD G        N  
Sbjct: 61  VAIGGHALDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTHDDNGESPPFILSNPP 120

Query: 121 SGSQYISYWRAP----------RMLALPSSSS----ARKRVRTKFTEEQKEKMVEMAEKM 180
             +Q++ YWRAP          RMLALPS SS     RKRVRTKFTEEQKEKM+ MAEK+
Sbjct: 121 PTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGGCRKRVRTKFTEEQKEKMLVMAEKL 180

Query: 181 EWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSKESKQN 197
           +WRIQK DEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR KES+ N
Sbjct: 181 DWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR-KESEHN 224

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy TrEMBL
Match: A0A6J1FUN2 (zinc-finger homeodomain protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447027 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.6e-66
Identity = 145/228 (63.60%), Postives = 166/228 (72.81%), Query Frame = 0


Query: 1   MELEDHEKEDMKIVEPPPNYINKI-------HPLSRHTKNPSPVHSNPIIYN-YKECLKN 60
           ME EDH++E+   +E P NY   +        PLSR  K PSP+HS+P     YKECLKN
Sbjct: 1   MEFEDHDEEEDMEMEAPTNYDKPLLQTPPPPPPLSRLNKTPSPLHSSPPPPPLYKECLKN 60

Query: 61  HAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGES------ 120
           HAV++GGH+LDGCGEFMP+GP+GSLDALKCAAC+CHRNFHRKDIT     NGES      
Sbjct: 61  HAVSIGGHSLDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTTNDDNGESPPFILS 120

Query: 121 ----GSQYISYWRAP----------RMLALPSSSS----ARKRVRTKFTEEQKEKMVEMA 180
                +Q++ YWRAP          RMLALPS SS     RKRVRTKFTEEQKEKM+ MA
Sbjct: 121 NPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGGCRKRVRTKFTEEQKEKMLVMA 180

Query: 181 EKMEWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSKESKQN 197
           EK++WRIQK DEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR K+S+ N
Sbjct: 181 EKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFR-KDSEHN 227

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy TrEMBL
Match: A0A6J1C4L4 (zinc-finger homeodomain protein 2-like OS=Momordica charantia OX=3673 GN=LOC111008323 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-54
Identity = 127/213 (59.62%), Postives = 147/213 (69.01%), Query Frame = 0


Query: 1   MELEDHEKE--------DMKIVEPPPNYINKIHP--LSRHTKNPSPVHSNPIIYNYKECL 60
           MELEDHE+         D++ V      +   +P    R  KNP+PV +N  +  Y+ECL
Sbjct: 1   MELEDHEERMQQVDLDLDLEAVITTKPLLRNHNPPHAPRLNKNPTPVQTN--LPTYRECL 60

Query: 61  KNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGESGSQY 120
           KNHAVA+GGHALDGCGEFMP+GP GSLDALKCAAC CHRNFHRKD            +  
Sbjct: 61  KNHAVALGGHALDGCGEFMPAGPDGSLDALKCAACTCHRNFHRKD------------APL 120

Query: 121 ISYWRAP----------RMLALPS-SSSARKRVRTKFTEEQKEKMVEMAEKMEWRIQKKD 180
           ISY RAP          RMLALP+ +   RKR+RTKFTEEQKEKM+ MAEK+EWRI+K+D
Sbjct: 121 ISYSRAPAGYLHVAPERRMLALPAPAEMGRKRMRTKFTEEQKEKMLGMAEKLEWRIEKED 180

Query: 181 EAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSKE 193
           EAAV EFCN IGVKRRVLKVWMHNNKNTFR  +
Sbjct: 181 EAAVAEFCNAIGVKRRVLKVWMHNNKNTFRKDQ 199

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy TrEMBL
Match: A0A444WVZ6 (ZF-HD dimerization-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_Scaffold1g107516 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.0e-44
Identity = 106/222 (47.75%), Postives = 129/222 (58.11%), Query Frame = 0


Query: 24  IHPLSRHTKNPSPVHSNPIIYNYKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCA 83
           + P++    N +   SN +   Y+ECLKNHAV +GGHALDGCGEFMP+G  G+LDALKCA
Sbjct: 41  VQPMTVRNNNNNNSSSNMVKPRYRECLKNHAVGIGGHALDGCGEFMPAGTEGTLDALKCA 100

Query: 84  ACHCHRNFHRKDITDDGGVNGESGSQYI--------------SYWRAPR----------- 143
           AC+CHRNFHRK+ T+  G     G  Y+              +Y+R P            
Sbjct: 101 ACNCHRNFHRKE-TELAGAGPGGGGPYLLTHHPHHHQPPPFAAYYRTPAGYLHVSGGQQR 160

Query: 144 --MLALPSS---------------------------SSARKRVRTKFTEEQKEKMVEMAE 192
              LALPS+                           SS+RKR RTKFT+EQKEKM+E+AE
Sbjct: 161 AGTLALPSTSGAGGGGTARDFEQEDVSGGGGGGGGGSSSRKRFRTKFTQEQKEKMLELAE 220

[Close]

BLAST of CcUC10G193880.1 vs. ExPASy TrEMBL
Match: A0A6P4DAL9 (zinc-finger homeodomain protein 1 OS=Arachis duranensis OX=130453 GN=LOC107487268 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.0e-44
Identity = 106/221 (47.96%), Postives = 129/221 (58.37%), Query Frame = 0


Query: 24  IHPLSRHTKNPSPVHSNPIIYNYKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCA 83
           + P++    N +   SN +   Y+ECLKNHAV +GGHALDGCGEFMP+G  G+LDALKCA
Sbjct: 41  VQPMTVRNNNNNNNSSNMVKPKYRECLKNHAVGIGGHALDGCGEFMPAGTEGTLDALKCA 100

Query: 84  ACHCHRNFHRKDITDDGGVNGESGSQYI--------------SYWRAPR----------- 143
           AC+CHRNFHRK+ T+  G     G  Y+              +Y+R P            
Sbjct: 101 ACNCHRNFHRKE-TELAGAGPGGGGPYLLTHHPHHHQPPPFAAYYRTPAGYLHVSGGQQR 160

Query: 144 --MLALPSS---------------------------SSARKRVRTKFTEEQKEKMVEMAE 191
              LALPS+                           SS+RKR RTKFT+EQKEKM+E+AE
Sbjct: 161 AGTLALPSTSGAGGGGTARDFEQEDVSGGGGGGGGGSSSRKRFRTKFTQEQKEKMLELAE 220

[Close]

BLAST of CcUC10G193880.1 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-39
Identity = 97/223 (43.50%), Postives = 121/223 (54.26%), Query Frame = 0


Query: 1   MELEDHEKE-DMKIVEPPPNYINKIHPLSRHTKNPSPVHSNPI--IYNYKECLKNHAVAV 60
           M  ED E++ +M  V PP  Y +     +  +       S  +     Y+ECLKNHAV +
Sbjct: 1   MNFEDQEEDMEMSGVNPPCGYDSLSGEGATSSGGGGVGRSKGVGAKIRYRECLKNHAVNI 60

Query: 61  GGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDDGGVNGESGSQYISYWRAP 120
           GGHA+DGC EFMPSG  G+LDALKCAAC CHRNFHRK+    GG       +  +Y+  P
Sbjct: 61  GGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGG----RAHRVPTYYNRP 120

Query: 121 RMLALP-----------------------------SSSSARKRVRTKFTEEQKEKMVEMA 180
                P                             SS    KR RTKFT EQKEKM+  A
Sbjct: 121 PQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFRTKFTAEQKEKMLAFA 180

Query: 181 EKMEWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSK 192
           E++ WRIQK D+ AV +FC E GV+R+VLK+WMHNNKN+   K
Sbjct: 181 ERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSLGKK 219

[Close]

BLAST of CcUC10G193880.1 vs. TAIR 10
Match: AT1G14440.1 (homeobox protein 31 )

HSP 1 Score: 154.8 bits (390), Expect = 7.0e-38
Identity = 91/215 (42.33%), Postives = 116/215 (53.95%), Query Frame = 0


Query: 30  HTKNPSPVHSNPII----YNYKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAAC 89
           H ++P  V  N II      YKECLKNHA A+GG+A DGCGEFMPSG  GS++AL C+AC
Sbjct: 70  HHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSAC 129

Query: 90  HCHRNFHRKDITDDGGVNGESGSQYISY--------------WRAPRMLALPSSSS---- 149
           +CHRNFHRK++  +G +   + S Y  +                 P  + +P   S    
Sbjct: 130 NCHRNFHRKEV--EGELAATAMSPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRY 189

Query: 150 -----------------------------ARKRVRTKFTEEQKEKMVEMAEKMEWRIQKK 194
                                         +KR RTKFT EQKEKM+  AEK+ W+IQ++
Sbjct: 190 MHNNSESEDFMEEDGVTTASRSLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQ 249

[Close]

BLAST of CcUC10G193880.1 vs. TAIR 10
Match: AT1G14440.2 (homeobox protein 31 )

HSP 1 Score: 154.8 bits (390), Expect = 7.0e-38
Identity = 91/215 (42.33%), Postives = 116/215 (53.95%), Query Frame = 0


Query: 30  HTKNPSPVHSNPII----YNYKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAAC 89
           H ++P  V  N II      YKECLKNHA A+GG+A DGCGEFMPSG  GS++AL C+AC
Sbjct: 70  HHQDPHHVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSAC 129

Query: 90  HCHRNFHRKDITDDGGVNGESGSQYISY--------------WRAPRMLALPSSSS---- 149
           +CHRNFHRK++  +G +   + S Y  +                 P  + +P   S    
Sbjct: 130 NCHRNFHRKEV--EGELAATAMSPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRY 189

Query: 150 -----------------------------ARKRVRTKFTEEQKEKMVEMAEKMEWRIQKK 194
                                         +KR RTKFT EQKEKM+  AEK+ W+IQ++
Sbjct: 190 MHNNSESEDFMEEDGVTTASRSLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQ 249

[Close]

BLAST of CcUC10G193880.1 vs. TAIR 10
Match: AT2G02540.1 (homeobox protein 21 )

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-36
Identity = 82/206 (39.81%), Postives = 112/206 (54.37%), Query Frame = 0


Query: 41  PIIYNYKECLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDITDD- 100
           P++  YKECLKNHA  +GG+A+DGCGEFMPSG  GS++AL C+ C+CHRNFHR++   + 
Sbjct: 82  PVVIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEE 141

Query: 101 -------------------------------------------GGVNGES-------GSQ 160
                                                       G N ES       G  
Sbjct: 142 KTFFSPYLNHHQPPPQQRKLMFHHKMIKSPLPQQMIMPIGVTTAGSNSESEDLMEEEGGG 201

Query: 161 YISYWRAPRMLALPSS--SSARKRVRTKFTEEQKEKMVEMAEKMEWRIQKKDEAAVMEFC 194
            +++ R P     P S   + +KR RTKFT+EQKEKM+  AE++ W+IQ+++E+ V + C
Sbjct: 202 SLTF-RQPPPPPSPYSYGHNQKKRFRTKFTQEQKEKMISFAERVGWKIQRQEESVVQQLC 261

[Close]

BLAST of CcUC10G193880.1 vs. TAIR 10
Match: AT5G65410.1 (homeobox protein 25 )

HSP 1 Score: 148.3 bits (373), Expect = 6.5e-36
Identity = 94/238 (39.50%), Postives = 127/238 (53.36%), Query Frame = 0


Query: 1   MELEDHEKEDMKIVEPPP--NYINKIHPLSRHTKNPSP---------VH-SNPIIYNYKE 60
           M L + E++D  + + PP    + K    S  T   +          VH      + ++E
Sbjct: 18  MNLHEEEEDDDAVYDSPPLSRVLPKASTESHETTGTTSTGGGGGFMVVHGGGGSRFRFRE 77

Query: 61  CLKNHAVAVGGHALDGCGEFMPSGPHGSLDALKCAACHCHRNFHRKDIT--DDGGVNGES 120
           CLKN AV +GGHA+DGCGEFMP+G  G++DALKCAAC CHRNFHRK++          + 
Sbjct: 78  CLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYFHHAPPQHQP 137

Query: 121 GSQYISYWRAPR--------------MLALP-------------SSSSA----RKRVRTK 180
                 ++R P                LALP             SS+ A    RKR RTK
Sbjct: 138 PPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAGGGIRKRHRTK 197

Query: 181 FTEEQKEKMVEMAEKMEWRIQKKDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRSKES 194
           FT EQKE+M+ +AE++ WRIQ++D+  +  FC E GV R+VLKVW+HNNK+T     S
Sbjct: 198 FTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGVPRQVLKVWLHNNKHTLGKSPS 255

The following BLAST results are available for this feature:

BLAST of CcUC10G193880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905975.1	4.3e-90	84.54	zinc-finger homeodomain protein 10-like [Benincasa hispida]	[more]
XP_022999794.1	2.3e-67	66.22	zinc-finger homeodomain protein 1-like [Cucurbita maxima]	[more]
KAG7031305.1	3.3e-66	63.60	Zinc-finger homeodomain protein 1, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022941755.1	3.3e-66	63.60	zinc-finger homeodomain protein 1-like [Cucurbita moschata]	[more]
KAG6600666.1	4.3e-66	63.32	Zinc-finger homeodomain protein 1, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC10G193880.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YXH5	8.0e-39	42.08	Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH...	[more]
A2YWA6	1.0e-38	42.48	Zinc-finger homeodomain protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD2...	[more]
Q6ZB90	1.0e-38	42.48	Zinc-finger homeodomain protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH...	[more]
Q9SB61	2.3e-38	43.50	Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]
A2Z259	6.8e-38	36.52	Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD1...	[more]

BLAST of CcUC10G193880.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KI40	1.1e-67	66.22	zinc-finger homeodomain protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114940...	[more]
A0A6J1FUN2	1.6e-66	63.60	zinc-finger homeodomain protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1C4L4	1.1e-54	59.62	zinc-finger homeodomain protein 2-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A444WVZ6	3.0e-44	47.75	ZF-HD dimerization-type domain-containing protein OS=Arachis hypogaea OX=3818 GN...	[more]
A0A6P4DAL9	3.0e-44	47.96	zinc-finger homeodomain protein 1 OS=Arachis duranensis OX=130453 GN=LOC10748726...	[more]

BLAST of CcUC10G193880.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24660.1	1.7e-39	43.50	homeobox protein 22	[more]
AT1G14440.1	7.0e-38	42.33	homeobox protein 31	[more]
AT1G14440.2	7.0e-38	42.33	homeobox protein 31	[more]
AT2G02540.1	1.0e-36	39.81	homeobox protein 21	[more]
AT5G65410.1	6.5e-36	39.50	homeobox protein 25	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006455	Homeodomain, ZF-HD class	TIGRFAM	TIGR01565	TIGR01565	coord: 129..186 e-value: 3.4E-25 score: 85.7
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 45..95 e-value: 4.0E-29 score: 98.8
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 45..96 e-value: 4.4E-28 score: 97.4
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 46..95 score: 27.787325
None	No IPR available	GENE3D	1.10.10.60		coord: 121..191 e-value: 1.2E-30 score: 107.2
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 123..191 coord: 32..100
None	No IPR available	PANTHER	PTHR31948:SF61	ZINC-FINGER HOMEODOMAIN PROTEIN 4	coord: 123..191 coord: 32..100
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 123..189

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G193880	CcUC10G193880	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G193880.1-exon	CcUC10G193880.1-exon-CicolChr10:15881440..15882030	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G193880.1-cds	CcUC10G193880.1-cds-CicolChr10:15881440..15882030	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G193880.1	CcUC10G193880.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding