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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAGAGTTTGCTATTGTAGGAGCTTATGTTCCTGATACTCGCAGTGTTGATATTATTGAGCTTCATAGACTACATAGAATATTAAATAGTTATATTGCAATATGTACATATTTTGGAGTTGCATTTTAAATAAATGTATAGGAGATGATCATGTAAACACTTTCATTGTTAACCTAACAAATAACTCTTATTTTCAAATAAAGAAAAAATTAACTCCTGTGCAATCCAACTCTTATACCAAAGAAAAAAGACTTGATTGTTAGGTGGTCGACTGTAACGTAACAGGTCTCCTTTTACTGCATGAGAGAAAAGCAACTACAGGGCACTATGTGATTGGGTGGCTAGATTGGGCTATATCGAAGTATTGATAGTAAAAATTCTCTAAAATATCCTCAAATAGAAATTTGAGATAAAATGAAATAGAAACAAAGACAACAAAATGAGCAATCCATTCAAAAAAATAAATTTTAAGTGCTCTCCCAAACATACACTAAATATAATGTTAGGTTTATTGTTAGTAATGGAAAACAAAAAGATGAACTTACAACGGGACGGTTAGCAACGTTGTAAGACCAAGCAGTAGAACCACTGCCATTCAAGCGGCCCGAACCGTCGATGAACAAGTTGTTGACTTGGTTGATACTGAGCCAGTAGTCTCCGGTGGCGAATTGCTTACCGGCAGGAGCCAACAGTTCTCCATCAAGTTGTATACGAATGACGCCATGGCATGGACCTTGAAGTAG mRNA sequence ATGGAAGATAATGGAAAACAAAAAGATGAACTTACAACGGGACGGTTAGCAACGTTTAGAACCACTGCCATTCAAGCGGCCCGAACCGTCGATGAACAAGTTGTTGACTTGGTTGATACTGAGCCAGTAGTCTCCGGTGGCGAATTGCTTACCGGCAGGAGCCAACAGTTCTCCATCAAGTTGTATACGAATGACGCCATGGCATGGACCTTGAAGTAG Coding sequence (CDS) ATGGAAGATAATGGAAAACAAAAAGATGAACTTACAACGGGACGGTTAGCAACGTTTAGAACCACTGCCATTCAAGCGGCCCGAACCGTCGATGAACAAGTTGTTGACTTGGTTGATACTGAGCCAGTAGTCTCCGGTGGCGAATTGCTTACCGGCAGGAGCCAACAGTTCTCCATCAAGTTGTATACGAATGACGCCATGGCATGGACCTTGAAGTAG Protein sequence MEDNGKQKDELTTGRLATFRTTAIQAARTVDEQVVDLVDTEPVVSGGELLTGRSQQFSIKLYTNDAMAWTLK
Homology
BLAST of CcUC10G190540.1 vs. NCBI nr
Match: KAE8650114.1 (hypothetical protein Csa_010527, partial [Cucumis sativus]) HSP 1 Score: 77.8 bits (190), Expect = 4.3e-11 Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 0
Query: 21 TTAIQAARTVDEQVVDLVDTEPVVSGGELLTGRSQQFSIKLYTNDAMAWTLK 73
TTA QA +TVDEQVVD+ DT+P+V+ G+LL SQQF+IKLYTNDAMAWTLK
Sbjct: 22 TTAGQATQTVDEQVVDIFDTKPMVADGKLLIRGSQQFAIKLYTNDAMAWTLK 73
BLAST of CcUC10G190540.1 vs. ExPASy TrEMBL
Match: A0A0A0L2V8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063630 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.1e-11 Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 0
Query: 21 TTAIQAARTVDEQVVDLVDTEPVVSGGELLTGRSQQFSIKLYTNDAMAWTLK 73
TTA QA +TVDEQVVD+ DT+P+V+ G+LL SQQF+IKLYTNDAMAWTLK
Sbjct: 22 TTAGQATQTVDEQVVDIFDTKPMVADGKLLIRGSQQFAIKLYTNDAMAWTLK 73
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8650114.1 | 4.3e-11 | 73.08 | hypothetical protein Csa_010527, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L2V8 | 2.1e-11 | 73.08 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063630 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC10G190540.1-exon | CcUC10G190540.1-exon-CicolChr10:5599685..5599692 | exon |
| CcUC10G190540.1-exon | CcUC10G190540.1-exon-CicolChr10:5600206..5600253 | exon |
| CcUC10G190540.1-exon | CcUC10G190540.1-exon-CicolChr10:5600268..5600430 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC10G190540.1-cds | CcUC10G190540.1-cds-CicolChr10:5599685..5599692 | CDS |
| CcUC10G190540.1-cds | CcUC10G190540.1-cds-CicolChr10:5600206..5600253 | CDS |
| CcUC10G190540.1-cds | CcUC10G190540.1-cds-CicolChr10:5600268..5600430 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC10G190540.1 | CcUC10G190540.1-protein | polypeptide |
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