CcUC10G187530.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G187530.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	glycine-rich cell wall structural protein 1.8-like
Location	CicolChr10: 1558912 .. 1559685 (+)
Sequence length	774
RNA-Seq Expression	CcUC10G187530.1
Synteny	CcUC10G187530.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATCTTTAGAACTTTATCTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCTTAGCTTCGGCAGCCAGAACTCTTCTCTCCTATGATCCTCCACATCATTTTGGATATGATAATTATGATCATTCTGTACATAACCCGAAAGTAGGATATGAACATGATCATCATGATGGACCTTATGGTGGTGGTGCTGGTGGTGGATATGGAGGCGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTGGAGGTTCTGGATATGCAGGTGTAGGAGAACATGGGGCTGGTTATGGTAGTGGTGGAGGTGGTGGATATGGAGCAGGAGTTGGGTCTGACCTTGGTGGTAGTGGATATGGAAGTGGTGGTGGCGGAGGGAGTGGCGGAGGATATGGTGATCTAGGAGGACATGGAAAAGGGTATGGAAGTGGTGGTGGTGGAGGAAGTGGGTATGGAGGTAGAGGAGATCATGGAGCTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGCAGGATCATATGGTCCAGGGGGAGAACATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGTCAGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGTGGTGGAGGAGCAGGTTATGGTGGTGGAGCACAAGGAAGTGGATATGGAAATGGTGGTGGAGCTGGAAGTGGCTACGGTGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

mRNA sequence

ATGGCTATCTTTAGAACTTTATCTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCTTAGCTTCGGCAGCCAGAACTCTTCTCTCCTATGATCCTCCACATCATTTTGGATATGATAATTATGATCATTCTGTACATAACCCGAAAGTAGGATATGAACATGATCATCATGATGGACCTTATGGTGGTGGTGCTGGTGGTGGATATGGAGGCGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTGGAGGTTCTGGATATGCAGGTGTAGGAGAACATGGGGCTGGTTATGGTAGTGGTGGAGGTGGTGGATATGGAGCAGGAGTTGGGTCTGACCTTGGTGGTAGTGGATATGGAAGTGGTGGTGGCGGAGGGAGTGGCGGAGGATATGGTGATCTAGGAGGACATGGAAAAGGGTATGGAAGTGGTGGTGGTGGAGGAAGTGGGTATGGAGGTAGAGGAGATCATGGAGCTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGCAGGATCATATGGTCCAGGGGGAGAACATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGTCAGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGTGGTGGAGGAGCAGGTTATGGTGGTGGAGCACAAGGAAGTGGATATGGAAATGGTGGTGGAGCTGGAAGTGGCTACGGTGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

Coding sequence (CDS)

ATGGCTATCTTTAGAACTTTATCTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCTTAGCTTCGGCAGCCAGAACTCTTCTCTCCTATGATCCTCCACATCATTTTGGATATGATAATTATGATCATTCTGTACATAACCCGAAAGTAGGATATGAACATGATCATCATGATGGACCTTATGGTGGTGGTGCTGGTGGTGGATATGGAGGCGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTGGAGGTTCTGGATATGCAGGTGTAGGAGAACATGGGGCTGGTTATGGTAGTGGTGGAGGTGGTGGATATGGAGCAGGAGTTGGGTCTGACCTTGGTGGTAGTGGATATGGAAGTGGTGGTGGCGGAGGGAGTGGCGGAGGATATGGTGATCTAGGAGGACATGGAAAAGGGTATGGAAGTGGTGGTGGTGGAGGAAGTGGGTATGGAGGTAGAGGAGATCATGGAGCTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGCAGGATCATATGGTCCAGGGGGAGAACATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGTCAGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGTGGTGGAGGAGCAGGTTATGGTGGTGGAGCACAAGGAAGTGGATATGGAAATGGTGGTGGAGCTGGAAGTGGCTACGGTGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

Protein sequence

MAIFRTLSFGFLLLVGLGLASAARTLLSYDPPHHFGYDNYDHSVHNPKVGYEHDHHDGPYGGGAGGGYGGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAQGSGYGNGGGAGSGYGGSGEEGGYDGGYAP

Homology

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BLAST of CcUC10G187530.1 vs. NCBI nr
Match: XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 312.8 bits (800), Expect = 2.8e-81
Identity = 236/258 (91.47%), Postives = 237/258 (91.86%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYD-PPHHFGYDNYDHSVHNPKVGYEHDHHDGP 60
           MAI RTLSFGFLLLVGLGLASA R LLSYD PPH  GYDNYDH VHNPKVGYE DHHDGP
Sbjct: 9   MAILRTLSFGFLLLVGLGLASATRALLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDGP 68

Query: 61  YGGGAGGGYGGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGSGGGGGYGAGVGSDL 120
           YGGGAGGGYGGGAGSSLGGSGYGS  GGGGGSGYAG G+HG GYGSGGGGGYGAGVGSDL
Sbjct: 69  YGGGAGGGYGGGAGSSLGGSGYGS--GGGGGSGYAGAGDHGVGYGSGGGGGYGAGVGSDL 128

Query: 121 GGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVG 180
           GGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHG GYGSGGGGGYGSG G
Sbjct: 129 GGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGG 188

Query: 181 AGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAQGSGYGNGGGAG 240
           AG YGPG EHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGA GS    GGGAG
Sbjct: 189 AG-YGPGVEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHGS----GGGAG 248

Query: 241 SGYGGSGEEGGYDGGYAP 258
           SGYGGSGEEGGYDGGYAP
Sbjct: 249 SGYGGSGEEGGYDGGYAP 259

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BLAST of CcUC10G187530.1 vs. NCBI nr
Match: XP_038903617.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-77
Identity = 229/258 (88.76%), Postives = 233/258 (90.31%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYD-PPHHFGYDNYDHSVHNPKVGYEHDHHDGP 60
           M IFR LSFG LLLVGLGLASA RTLLSYD PPH  GYDNYDH VHNPKVGYE DHHDGP
Sbjct: 1   MDIFRNLSFGLLLLVGLGLASATRTLLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDGP 60

Query: 61  YGGGAGGGYGGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGSGGGGGYGAGVGSDL 120
           YGGGA GGYGGGAGSSLGGSGYGS  GGGGGSGY GVG+HG GYGSGGGGGYGAGVGSDL
Sbjct: 61  YGGGAAGGYGGGAGSSLGGSGYGS--GGGGGSGYTGVGDHGVGYGSGGGGGYGAGVGSDL 120

Query: 121 GGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVG 180
           GGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGY GRGDHG GYGSGGGGGYGSG G
Sbjct: 121 GGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYEGRGDHGVGYGSGGGGGYGSG-G 180

Query: 181 AGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAQGSGYGNGGGAG 240
              +GPG  HG+GYGSGGGGGSG GYGGSKGY GGSGGGGGAGYGGGA GSGYG+GGGAG
Sbjct: 181 GVEHGPGVGHGIGYGSGGGGGSGGGYGGSKGYEGGSGGGGGAGYGGGAHGSGYGSGGGAG 240

Query: 241 SGYGGSGEEGGYDGGYAP 258
           SGYGGSGEEGGYDGGYAP
Sbjct: 241 SGYGGSGEEGGYDGGYAP 255

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BLAST of CcUC10G187530.1 vs. NCBI nr
Match: XP_011650342.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 2.1e-68
Identity = 223/270 (82.59%), Postives = 229/270 (84.81%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYD-PPHHFGYDNYDHSVHNPKVGYEH------ 60
           MAI +TLSFGFLLLV LGLASAAR+LLSYD PPH  GYDNYDH V NPKVGYEH      
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  ----DHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGSGG 120
               DHHD PYGGGAGGGY  G GAGSSLGGSGYGS  GGGGGSGY GVG H  GYGSGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGS--GGGGGSGYGGVGNHEVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGA 240
           SGGGGGYGSGVG G+     +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGA
Sbjct: 181 SGGGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGA 240

Query: 241 QGSGYGNGGGAGSGYGGSGEEGGYDGGYAP 258
            GSGYG+GGGA     GSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGA-----GSGEEGGYDGGYAP 261

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BLAST of CcUC10G187530.1 vs. NCBI nr
Match: XP_008448673.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 2.1e-68
Identity = 226/272 (83.09%), Postives = 232/272 (85.29%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYD-PPHHFGYD-NYD-HSVHNPKVGYEHDHHD 60
           MAI +TLSFGFLLLV LGLASAAR+LL YD PPH  GYD NYD H V NPKVGYEHDHHD
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60

Query: 61  G----------PYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGS 120
           G          PYGGGAGGGY  GGGAGSSLGGSGYGS  GGGGGSGY GVG HG GYGS
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGS--GGGGGSGYGGVGNHGVGYGS 120

Query: 121 GGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAG 180
           GGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHG G
Sbjct: 121 GGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVG 180

Query: 181 YGSGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGG 240
           YGSGGGGGYGSGVG    G G +HGVGYGSGGGGG+G GYGGSKGYG GSGGGGGAGYGG
Sbjct: 181 YGSGGGGGYGSGVG----GAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGG 240

Query: 241 GAQGSGYGNGGGAGSGYGGSGEEGGYDGGYAP 258
           GA GSGYG+GGGAG+   GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGGAGA---GSGEEGGYDGGYAP 263

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BLAST of CcUC10G187530.1 vs. NCBI nr
Match: BAA34064.1 (glycine-rich protein-2, partial [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 4.7e-68
Identity = 222/270 (82.22%), Postives = 229/270 (84.81%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYD-PPHHFGYDNYDHSVHNPKVGYEH------ 60
           MAI +TLSFGFLLLV LGLASAAR+LLSYD PPH  GYDNYDH V NPKVGYEH      
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  ----DHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGSGG 120
               DHHD PYGGGAGGGY  G GAGSSLGGSGYGS  GGGGGSGY GVG H  GYGSGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGS--GGGGGSGYGGVGNHEVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGA 240
           SGGGGGYGSGVG G+     +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGA
Sbjct: 181 SGGGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGA 240

Query: 241 QGSGYGNGGGAGSGYGGSGEEGGYDGGYAP 258
            GSGYG+GGGA     GSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGA-----GSGEEGGYDGGYAP 261

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BLAST of CcUC10G187530.1 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.4e-05
Identity = 146/318 (45.91%), Postives = 162/318 (50.94%), Query Frame = 0


Query: 3   IFRTLSFGFLLLVGLGLASAARTLLSYDPPHHFG-------------YDNYDHSVHNPKV 62
           I R  S  FL+L+ LG+ SA R LL+ D  +  G             Y            
Sbjct: 4   IHRLPSLVFLVLLALGVCSARRALLTLDAGYGLGHGTGGGYGGAAGSYGGGGGGGSGGGG 63

Query: 63  GYEHDHHDGPYGGGAGG--------------GYGGGAGSSLGG----------SGYGSGG 122
           GY  +H    YGGG+GG              GYGGG GS  GG           GYG G 
Sbjct: 64  GYAGEHGVVGYGGGSGGGQGGGVGYGGDQGAGYGGGGGSGGGGGVAYGGGGERGGYGGGQ 123

Query: 123 GGGGGSGYAGVGEHGAGYGSGGGGGYGAGVGSDLGGS---GYGSGGG-GGSGGGYGDL-G 182
           GGG G GY   GEHG GYG GGG G G G G + GG+   GYG+GGG GG GGG GD  G
Sbjct: 124 GGGAGGGYGAGGEHGIGYGGGGGSGAGGGGGYNAGGAQGGGYGTGGGAGGGGGGGGDHGG 183

Query: 183 GHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGA-----------------GSY 242
           G+G G G+GGG G GYGG G+HG G G G GGG G G GA                 G Y
Sbjct: 184 GYGGGQGAGGGAGGGYGGGGEHGGGGGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGY 243

Query: 243 GPGGEHGVGYGSGGGGGSGSGYGG----SKGYGGGSGGGGGAGYGGGAQ---GSGYGNGG 255
           G GGEHG G G G GGG+G GYG       G GGG GGG G GYG G +   G+G G GG
Sbjct: 244 GAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGG 303

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BLAST of CcUC10G187530.1 vs. ExPASy TrEMBL
Match: A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.0e-68
Identity = 223/270 (82.59%), Postives = 229/270 (84.81%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYD-PPHHFGYDNYDHSVHNPKVGYEH------ 60
           MAI +TLSFGFLLLV LGLASAAR+LLSYD PPH  GYDNYDH V NPKVGYEH      
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  ----DHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGSGG 120
               DHHD PYGGGAGGGY  G GAGSSLGGSGYGS  GGGGGSGY GVG H  GYGSGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGS--GGGGGSGYGGVGNHEVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGA 240
           SGGGGGYGSGVG G+     +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGA
Sbjct: 181 SGGGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGA 240

Query: 241 QGSGYGNGGGAGSGYGGSGEEGGYDGGYAP 258
            GSGYG+GGGA     GSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGA-----GSGEEGGYDGGYAP 261

[Close]

BLAST of CcUC10G187530.1 vs. ExPASy TrEMBL
Match: A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.0e-68
Identity = 226/272 (83.09%), Postives = 232/272 (85.29%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYD-PPHHFGYD-NYD-HSVHNPKVGYEHDHHD 60
           MAI +TLSFGFLLLV LGLASAAR+LL YD PPH  GYD NYD H V NPKVGYEHDHHD
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60

Query: 61  G----------PYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGS 120
           G          PYGGGAGGGY  GGGAGSSLGGSGYGS  GGGGGSGY GVG HG GYGS
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGS--GGGGGSGYGGVGNHGVGYGS 120

Query: 121 GGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAG 180
           GGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHG G
Sbjct: 121 GGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVG 180

Query: 181 YGSGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGG 240
           YGSGGGGGYGSGVG    G G +HGVGYGSGGGGG+G GYGGSKGYG GSGGGGGAGYGG
Sbjct: 181 YGSGGGGGYGSGVG----GAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGG 240

Query: 241 GAQGSGYGNGGGAGSGYGGSGEEGGYDGGYAP 258
           GA GSGYG+GGGAG+   GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGGAGA---GSGEEGGYDGGYAP 263

[Close]

BLAST of CcUC10G187530.1 vs. ExPASy TrEMBL
Match: Q9ZWM2 (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.3e-68
Identity = 222/270 (82.22%), Postives = 229/270 (84.81%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYD-PPHHFGYDNYDHSVHNPKVGYEH------ 60
           MAI +TLSFGFLLLV LGLASAAR+LLSYD PPH  GYDNYDH V NPKVGYEH      
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  ----DHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGSGG 120
               DHHD PYGGGAGGGY  G GAGSSLGGSGYGS  GGGGGSGY GVG H  GYGSGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGS--GGGGGSGYGGVGNHEVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGA 240
           SGGGGGYGSGVG G+     +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGA
Sbjct: 181 SGGGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGA 240

Query: 241 QGSGYGNGGGAGSGYGGSGEEGGYDGGYAP 258
            GSGYG+GGGA     GSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGA-----GSGEEGGYDGGYAP 261

[Close]

BLAST of CcUC10G187530.1 vs. ExPASy TrEMBL
Match: A0A6J1CWP3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014911 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.6e-56
Identity = 202/260 (77.69%), Postives = 215/260 (82.69%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYDPPHHFGYDNYDHSVHNPKVGYEHDHHDGPY 60
           MAI +  S  FLLL+G GLASAARTLL ++P     Y+ YD      +VGY+ DHHDG Y
Sbjct: 1   MAISKAFSLSFLLLLGFGLASAARTLLGHEPD---AYNPYDR-----RVGYDRDHHDGAY 60

Query: 61  GGGAGGGYGGGAGSSLGGSGYGSGGGGGGGSGYAGVGEHGAGYGSGGGGGYGAGVGSDLG 120
           GGG+GGGYG GAGSSLGGSGYGSGGGGGGGSGY G G+HG GYGSGGGGGYG G+GS LG
Sbjct: 61  GGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLG 120

Query: 121 GSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGA 180
           G+GYGSGGGGGSGGGYGD GG GKGYGSGGGGGSGYGG GDHGAGYGSGGGGGYGSG G 
Sbjct: 121 GAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGG 180

Query: 181 GS-YGPGGEHGVGYGSGGGGGSGSGYGGSK-GYGGGSGG--GGGAGYG-GGAQGSGYGNG 240
           G+ YGP GEHGVGYGSGGGGGSG GYGGSK GYGGGSGG  GGG GYG GGA G GYG G
Sbjct: 181 GAGYGP-GEHGVGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGG 240

Query: 241 GGAGSGYGGSGEEGGYDGGY 256
           GG+G GYG SGEEGGYDGGY
Sbjct: 241 GGSGGGYGSSGEEGGYDGGY 251

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BLAST of CcUC10G187530.1 vs. ExPASy TrEMBL
Match: A0A6J1KTC0 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111498476 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 207/269 (76.95%), Postives = 221/269 (82.16%), Query Frame = 0


Query: 1   MAIFRTLSFGFLLLVGLGLASAARTLLSYDPPHH----FGYDNYDHSVHNPKVGYEHDHH 60
           MAI ++LS  FLLL+GLGLASAARTLLSYDPPHH    +GY       HNP+VGY+HDHH
Sbjct: 1   MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQ------HNPRVGYDHDHH 60

Query: 61  DGP---YGGGAGGGY--GGGAGSSLGGSGYGSGGGGGGGSGYAGVGE-HGAGYGSGGGGG 120
           DGP   YGGG+GGGY  G GAGS+LGGSGYGSGGGGGGGSGYAGVG+  G+GYGSGGGGG
Sbjct: 61  DGPYGAYGGGSGGGYGAGAGAGSALGGSGYGSGGGGGGGSGYAGVGDLGGSGYGSGGGGG 120

Query: 121 YGAGVGSDLG--GSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGS 180
            G G G DLG  G GYGSGGGGGSG GYGDL GHGKGYGSGGGGGSGYGG  DHG GYGS
Sbjct: 121 SGVGYG-DLGGHGKGYGSGGGGGSGVGYGDLSGHGKGYGSGGGGGSGYGGGADHGVGYGS 180

Query: 181 GGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGG-SKGYGGGSGGGGGAGYGGGA 240
           GGGGGYG+G GAG YGPGG+HGVGYGSGGGGGSG GYGG  KGYGGG       GYGGGA
Sbjct: 181 GGGGGYGAGGGAG-YGPGGDHGVGYGSGGGGGSGGGYGGRDKGYGGGP-----KGYGGGA 240

Query: 241 QGSGYGNGGGAGSGYGG-SGEEGGYDGGY 256
           +GSGYG+GGGAGSGYGG  GEEGGYDGGY
Sbjct: 241 KGSGYGSGGGAGSGYGGVGGEEGGYDGGY 256

The following BLAST results are available for this feature:

BLAST of CcUC10G187530.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905926.1	2.8e-81	91.47	glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]	[more]
XP_038903617.1	1.1e-77	88.76	glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]	[more]
XP_011650342.1	2.1e-68	82.59	glycine-rich cell wall structural protein 2 [Cucumis sativus]	[more]
XP_008448673.1	2.1e-68	83.09	PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]	[more]
BAA34064.1	4.7e-68	82.22	glycine-rich protein-2, partial [Cucumis sativus]	[more]

BLAST of CcUC10G187530.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10496	3.4e-05	45.91	Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]

BLAST of CcUC10G187530.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1U7	1.0e-68	82.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1	[more]
A0A1S3BJM7	1.0e-68	83.09	glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
Q9ZWM2	2.3e-68	82.22	Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A6J1CWP3	2.6e-56	77.69	glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica chara...	[more]
A0A6J1KTC0	1.3e-55	76.95	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of CcUC10G187530.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 165..183 score: 40.79 coord: 97..112 score: 39.06 coord: 124..134 score: 51.14 coord: 6..22 score: 33.09
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..257

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G187530	CcUC10G187530	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G187530.1-exon	CcUC10G187530.1-exon-CicolChr10:1558912..1559685	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G187530.1-cds	CcUC10G187530.1-cds-CicolChr10:1558912..1559685	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G187530.1	CcUC10G187530.1-protein	polypeptide