CcUC10G186990.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G186990.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	CicolChr10: 984810 .. 988825 (+)
Sequence length	1212
RNA-Seq Expression	CcUC10G186990.1
Synteny	CcUC10G186990.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGCTCTTTTGATAAATGCATGGGTGAATTATTGAAATTTCCAAATTCCCCAAAAGTTTCGCAATCTGTATTTCTCACCCAACCAAATCCCCAAAGTCATCGTCCCTCTGCTTCTTCTTGGTTTCGAGAGCTGAAGCAGAGCAGTGCTTGTAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCAGGCTTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTATCCTTTTCTTCTGCTTCATCAGTCCTCAAAACAACCGCTCTTAAACCCTCTAGAACCCTAGCTCCGCCGTGCTCCGTCCTTATGACGGGTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCAGAGACTGACGCCATGGGACTGCTTTTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATGAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGGTATTCACGAGCTGATTTTTTGTGCATAATGTGTAGTTGGTGAAGATATGGAAATATATGATTGGGGCTCAGTTTTATTCTTTTCGAACGATTTAGGTACTTTGATTTCTATGAATATCCCGTTTATGCCTAATTTTCTGTAGAGTTTTCTTCACCTGCACCGCAAACAGTTAGGCTACTAGTTGGTGTATTCATTCTGGTTCTAAAGTTGACATCGATTAAACAAGAGATTTCTTTGATCAGTGCCTTTTTAAAGAATGGCAATGGTTGGAGGTTAAAATTTAGGAGCAGGACAAACCCCTGGCTTCATCCTTCCCGTTTAAGCTATATTTTCCAAACTTTTTCTGTATTTCCAAATGCTAAAGATTTTTCTTTAAAAATTTTTTTGGAATAGGGCAGTCTGAACTTGGAATTTTCAGCTCAGAAGGAACCCTTTGATTTGATAGTGAGAATGGTTGACCTTTATTCGAAAGATGGAAAGCAATCAGCTAAATCTTACTATCTTAGTAAGGATAAATTTTGTTGAAAGTTTGAAACCTTTGGCTTGTATCCACTTGCAAATCTTCCAACCTCCTGCTGAATAGCAGAGAAAGCAGGTTGGTTGCCTTTTTATCCTCGGTTTTGGGAGGAAAAGACTTAGTTCTTCATTTGGACTATGGCTTACAAGAGCCTAAACACTTGTAATTGGATTAAAAGAAGAACCCTTCCATGGCGTTATCTCCTTCTGTTTTCCCTTCTTACCTAATGAAGAAATCCTGGACCATCTTTTTATTCCATTGGCAACGTGTTGCACAAAAGATTTACTTGTGAAAACCCCATTTTATTTGTTTTGGACAAGAAACAATTTCATTGATGAAATGAGATGATATAAAAAGTAAAATCATTCAAAGAGATTACAAAAGATTTCTCCTGTCGGATATGAAAGAATTTATGCTGTATATGTTAAAAGTATCCATATTTTTACTCCTACAAAGTGTCAAAAATATAGAGGCTTATAGGACTTCGAGTTGGGCGCTTTATTTGTCTTGAAATTTTTTTTAGTTCCTTTCATTCCAAATCTTCTAAATACCCGCCCTCGGAATGAAGGACCGAAGGTTATTCTTTGTTGGCTGGCTCAGATGATTTATCTGCTGCAAAATTTGCCAATCGAAACCCATTTTCTATAAGGACCAATTTCCCAAATCATTACTCCTTTGGGAAAGGTCTAATGTTACTTCTCCTAAGCAAGTAAACATGTTGGGCAAATCAAATACTTTTCAACAATTAAACATGGAGGCCTTCTTGTTCGTGCCCTATGACCTTCTTAGTGGCAGGTGATAAAGCATAGAGGTGGTGGAAGTTGAAGATATTACTAAAGTATGGTAGTAATGCATCTATTATCCGTCTCTCCCTTTTCCTTTATGGTATATTTTGAATAGCATGCTAGGGGTTGTGAAGAAGAATTGAGAAGTAGGAGAGTTATAGTGTCTTAACTCTTAACCCACTGAACTCAGAATGTACGTTTTCAAAACATCTACATATTAGTTATCTATTTGTTATCTATTTGTATCAAGTTCTACTTTGTGCTGGATAACACTTGGTCCTTACACAGTACAGATTTATCTTGAAACCACGTAATCTATATATATAACATGCAACCAATCATTTACAACTAATTTAATGCATTGGAATCAGAACTGAATATTTCTTTTCAAACTTCAATAGAGAAATGTAATGTGCTTGTGTCTATGGCTAGAGATGAGTGTATTCGTGCCCTACATTACTACATGAATAGGAAAATTAGCCAACTGTGAGAACGTATGCATATCTTCCCTGATTGTTAATTTATTTATGTTTTATTCTTGTTTCCATGGTTTGCATGGCCTTCATGTACGTTAGGAAATCTTCTAGAGTAATTTAATTTAGATTTATGTGGTTCATGGATGACCTTTTCATTATCTTCTCTTCGAATCTTTTATGTACAACCACTTTCTCAATCTATCATTCATTACCAAACCATTTTTCTAAATGTATACTGATATGTAACTTAAGGATGCTCGTGAGACTTGAGAGGTGTCAGCAGAAGAAATTATGTACTTTTCCTAACCCAGTTCATTTGTCAGAAAATGTTATGTCCTTAAGTTCCATATCCACTTGTCCTCATGTTGATTAAGGAACACACCTTCCAACTTTCTCATAATCCAAACCCAGTGTTCCAATTGTCTATCAAACAGATTCCTTCTCAGCCCAATGTACCCTTAGTTTGGGTGTCTCAAGTAATCACTTACTACCTCTCCTTTTGTACTAGGAATAAAATAGAGTAGATATTATGAAATACCCGACTCAAAGGTGGAATCAAACCACACCAGTTATTTCTTCCTGGATTTTAAGCCCATTTCCCATCTAATAAAGAAACCCTGACCCGTAAAACCCATACATTTAGCTAGATCAGGGCAGGGGCAAAAGGTAGACTAGCCTATATAGTTTTGTTTGTTTTCAGAGATCAGGACTTAAAATTTTAGAAGTGGGAATGCCATATTGACTCATGAGTATATGAATTTTCTCATTGTTTATTTGAAGCTGGAAATATCGATTACTGGGCTTTTTAAATACACACATATATAATATATATACATATATACACACACATATATACAGACACATATATATATTTCTGTTTTTCCTTTCCGGTCTCGAGAACTTGGGTTAGGAGGATATTCAACTTTCAACGAGTGGCACCTGATCTCATCTATTTTTGCATCATATTCATCAACATTTTGAAAGTGGATGGTCTGATTTCCTTCTATTAATGCTGTTTTCATTAGTGCTACCATGGCTATCTACGATGTTGTACAGCTCGTGCGGGCTGATGTATCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTCCATCAACCTCTTGGAGGGGCAAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAATGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATTGATGGAGTGATCGACAAAGACGGCATTATACCTCTCATGCCAGTGCCCGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGACGACGAGATATATTAGTTTCAGGCGTTTCGGCAAACCCTTCTCTAGGGTTTGATTTATTTCACGAGTATCAACTTTTGGCAAACTGTCTCTACTTACCAGAAGTTAAAAGGTATTGGGTATTGGACTCTTTTTTTTTTTGTCTGAAATTTTTAAATGAGCATTCTGAGGAAGGAAAAATTGACAAT

mRNA sequence

GTGCTCTTTTGATAAATGCATGGGTGAATTATTGAAATTTCCAAATTCCCCAAAAGTTTCGCAATCTGTATTTCTCACCCAACCAAATCCCCAAAGTCATCGTCCCTCTGCTTCTTCTTGGTTTCGAGAGCTGAAGCAGAGCAGTGCTTGTAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCAGGCTTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTATCCTTTTCTTCTGCTTCATCAGTCCTCAAAACAACCGCTCTTAAACCCTCTAGAACCCTAGCTCCGCCGTGCTCCGTCCTTATGACGGGTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCAGAGACTGACGCCATGGGACTGCTTTTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATGAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTGCTACCATGGCTATCTACGATGTTGTACAGCTCGTGCGGGCTGATGTATCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTCCATCAACCTCTTGGAGGGGCAAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAATGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATTGATGGAGTGATCGACAAAGACGGCATTATACCTCTCATGCCAGTGCCCGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGACGACGAGATATATTAGTTTCAGGCGTTTCGGCAAACCCTTCTCTAGGGTTTGATTTATTTCACGAGTATCAACTTTTGGCAAACTGTCTCTACTTACCAGAAGTTAAAAGGTATTGGGTATTGGACTCTTTTTTTTTTTGTCTGAAATTTTTAAATGAGCATTCTGAGGAAGGAAAAATTGACAAT

Coding sequence (CDS)

ATGGGTGAATTATTGAAATTTCCAAATTCCCCAAAAGTTTCGCAATCTGTATTTCTCACCCAACCAAATCCCCAAAGTCATCGTCCCTCTGCTTCTTCTTGGTTTCGAGAGCTGAAGCAGAGCAGTGCTTGTAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCAGGCTTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTATCCTTTTCTTCTGCTTCATCAGTCCTCAAAACAACCGCTCTTAAACCCTCTAGAACCCTAGCTCCGCCGTGCTCCGTCCTTATGACGGGTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCAGAGACTGACGCCATGGGACTGCTTTTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATGAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTGCTACCATGGCTATCTACGATGTTGTACAGCTCGTGCGGGCTGATGTATCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTCCATCAACCTCTTGGAGGGGCAAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAATGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATTGATGGAGTGATCGACAAAGACGGCATTATACCTCTCATGCCAGTGCCCGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGACGACGAGATATATTAG

Protein sequence

MGELLKFPNSPKVSQSVFLTQPNPQSHRPSASSWFRELKQSSACKSMELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

Homology

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BLAST of CcUC10G186990.1 vs. NCBI nr
Match: XP_008448589.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo])

HSP 1 Score: 538.9 bits (1387), Expect = 3.2e-149
Identity = 282/294 (95.92%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSF SASSVLKTTALKPSRTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 107 CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 166
           CSV MT PQTPDA+RRGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 167 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 226
           DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 227 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 286
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 287 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           EAVEYGLIDGVID+D IIPL+PVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of CcUC10G186990.1 vs. NCBI nr
Match: XP_038876611.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 535.4 bits (1378), Expect = 3.5e-148
Identity = 280/294 (95.24%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           MELLSRCSTL+P ASS+GLP SHGKPSNF PKLKSTLSF SASSVLKTTA KPSRT APP
Sbjct: 1   MELLSRCSTLLPHASSIGLPTSHGKPSNFLPKLKSTLSFPSASSVLKTTAPKPSRTPAPP 60

Query: 107 CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 166
           CSVLMT PQTPDAARRGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 167 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 226
           DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 227 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 286
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 287 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           EAVEYGLIDGVIDKD IIPLMPVPERVKASLNYEEISKDP KFL PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPTKFLNPDVPDDEIY 294

[Close]

BLAST of CcUC10G186990.1 vs. NCBI nr
Match: XP_022923515.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 531.9 bits (1369), Expect = 3.9e-147
Identity = 278/297 (93.60%), Postives = 287/297 (96.63%), Query Frame = 0


Query: 44  CKSMELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTL 103
           CKSMELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS+LSF SASSVLKTTA KPSRTL
Sbjct: 45  CKSMELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTL 104

Query: 104 APPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQD 163
           A  CSV MTGPQTPDAA+RGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQD
Sbjct: 105 ATSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQD 164

Query: 164 STKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAM 223
           STKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAM
Sbjct: 165 STKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAM 224

Query: 224 PNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYM 283
           PNARIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYM
Sbjct: 225 PNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYM 284

Query: 284 SPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           SPIEAVEYGLIDGVIDKD IIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Sbjct: 285 SPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 341

[Close]

BLAST of CcUC10G186990.1 vs. NCBI nr
Match: XP_022145352.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia])

HSP 1 Score: 530.0 bits (1364), Expect = 1.5e-146
Identity = 277/294 (94.22%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           MELLSRCSTLIP ASSL LPNSH KPSNF+PKLKS+LSF SA SVLK TALKPSRTLA P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 107 CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 166
           CSVLMT PQTPD ARRGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 167 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 226
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 227 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 286
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 287 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           EAVEYGLIDGVIDKD IIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of CcUC10G186990.1 vs. NCBI nr
Match: KAG7015794.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.5 bits (1360), Expect = 4.3e-146
Identity = 276/294 (93.88%), Postives = 285/294 (96.94%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           MELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS+LSF SASSVLKTTA KPSRTLAP 
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPS 60

Query: 107 CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 166
           CSV MTGPQTPDAA+RGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 167 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 226
           DIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 227 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 286
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 287 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           EAVEYGLIDGVIDKD IIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 294

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy Swiss-Prot
Match: Q94B60 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 6.8e-102
Identity = 207/305 (67.87%), Postives = 230/305 (75.41%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           M  LS  S+L P   S  L +S    S+ FPK  +               LKP++ ++PP
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLY-------------LKPTKLISPP 60

Query: 107 CSVLMTGP-----------QTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQ 166
                  P           QT ++A RGAE+D MGLL RERIVFLG+SIDDFVADAIMSQ
Sbjct: 61  LRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQ 120

Query: 167 LLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGG 226
           LLLLDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG G
Sbjct: 121 LLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAG 180

Query: 227 TKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQK 286
           TKGKR AMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNNVT II+  T   FE+V K
Sbjct: 181 TKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLK 240

Query: 287 DIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVP 341
           DIDRDRYMSPIEAVEYGLIDGVID D IIPL PVP+RVK  +NYEEISKDP KFLTP++P
Sbjct: 241 DIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIP 292

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy Swiss-Prot
Match: Q3ANI8 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) OX=110662 GN=clpP1 PE=3 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 4.0e-54
Identity = 104/190 (54.74%), Postives = 141/190 (74.21%), Query Frame = 0


Query: 114 PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 173
           P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYI 69

Query: 174 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 233
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 70  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129

Query: 234 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 293
           PLGGA GQA+D+EIQA+EI++ K  +  +++E TG P +K+ +D DRD ++SP EAVEYG
Sbjct: 130 PLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYG 189

Query: 294 LIDGVIDKDG 303
           LID V+D  G
Sbjct: 190 LIDRVVDSSG 199

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy Swiss-Prot
Match: Q3B0U1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 9.0e-54
Identity = 103/190 (54.21%), Postives = 140/190 (73.68%), Query Frame = 0


Query: 114 PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 173
           P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYV 69

Query: 174 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 233
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 70  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129

Query: 234 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 293
           PLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++SP EAVEYG
Sbjct: 130 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYG 189

Query: 294 LIDGVIDKDG 303
           LID V+D  G
Sbjct: 190 LIDRVVDSSG 199

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy Swiss-Prot
Match: Q7UA36 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) OX=84588 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.9e-52
Identity = 101/190 (53.16%), Postives = 139/190 (73.16%), Query Frame = 0


Query: 114 PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 173
           P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 174 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 233
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GG KGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQ 146

Query: 234 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 293
           PLGGA GQA+D+EIQA+EI+  K  +  ++++ TG P +K+ +D DRD ++SP EAV+YG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKIAEDTDRDYFLSPAEAVQYG 206

Query: 294 LIDGVIDKDG 303
           LID V+D  G
Sbjct: 207 LIDRVVDSSG 216

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy Swiss-Prot
Match: Q7V992 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.8e-52
Identity = 102/187 (54.55%), Postives = 138/187 (73.80%), Query Frame = 0


Query: 114 PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 173
           P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 174 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 233
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQ 146

Query: 234 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 293
           PLGGA GQA+D+EIQA+EI+  K  +  +++E TG P  K+ +D DRD ++SP +AVEYG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEYG 206

Query: 294 LIDGVID 300
           LID V+D
Sbjct: 207 LIDRVVD 213

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy TrEMBL
Match: A0A1S3BJF4 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490719 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.5e-149
Identity = 282/294 (95.92%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSF SASSVLKTTALKPSRTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 107 CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 166
           CSV MT PQTPDA+RRGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 167 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 226
           DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 227 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 286
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 287 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           EAVEYGLIDGVID+D IIPL+PVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy TrEMBL
Match: A0A6J1EC18 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111431188 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.9e-147
Identity = 278/297 (93.60%), Postives = 287/297 (96.63%), Query Frame = 0


Query: 44  CKSMELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTL 103
           CKSMELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS+LSF SASSVLKTTA KPSRTL
Sbjct: 45  CKSMELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTL 104

Query: 104 APPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQD 163
           A  CSV MTGPQTPDAA+RGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQD
Sbjct: 105 ATSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQD 164

Query: 164 STKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAM 223
           STKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAM
Sbjct: 165 STKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAM 224

Query: 224 PNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYM 283
           PNARIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYM
Sbjct: 225 PNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYM 284

Query: 284 SPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           SPIEAVEYGLIDGVIDKD IIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Sbjct: 285 SPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 341

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy TrEMBL
Match: A0A6J1CWB9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111014827 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 7.2e-147
Identity = 277/294 (94.22%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           MELLSRCSTLIP ASSL LPNSH KPSNF+PKLKS+LSF SA SVLK TALKPSRTLA P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 107 CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 166
           CSVLMT PQTPD ARRGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 167 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 226
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 227 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 286
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 287 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           EAVEYGLIDGVIDKD IIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy TrEMBL
Match: A0A6J1HNH6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111465249 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.2e-143
Identity = 272/294 (92.52%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           MELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS LSF SASSVLKTTA KPSRTLA  
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSGLSFPSASSVLKTTARKPSRTLATS 60

Query: 107 CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 166
            SV MTGPQTPDAA+RGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  SSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 167 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 226
           DIRLFINS+GGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVIQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 227 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 286
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 287 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           EAVEYGLIDGVIDKD IIPL+PVPERVKASLNY EISKDP+KF +PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFFSPDVPDDEIY 294

[Close]

BLAST of CcUC10G186990.1 vs. ExPASy TrEMBL
Match: A0A0A0L3S1 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G005040 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.3e-140
Identity = 266/294 (90.48%), Postives = 276/294 (93.88%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSF SASSVLKTTALKPSRTL PP
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 107 CSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTK 166
           CSV MT PQTPDAARRGAETDAMGLL RERIVFLGNSIDDFVADAI+SQLLLLDA+DSTK
Sbjct: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120

Query: 167 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 226
           DIRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 227 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 286
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 287 EAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 341
           EAVEYG IDGVID+D IIPLMPVP++VK   NY E+ KDP KFLTPDVPDDEI+
Sbjct: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of CcUC10G186990.1 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 372.1 bits (954), Expect = 4.8e-103
Identity = 207/305 (67.87%), Postives = 230/305 (75.41%), Query Frame = 0


Query: 47  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPP 106
           M  LS  S+L P   S  L +S    S+ FPK  +               LKP++ ++PP
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLY-------------LKPTKLISPP 60

Query: 107 CSVLMTGP-----------QTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQ 166
                  P           QT ++A RGAE+D MGLL RERIVFLG+SIDDFVADAIMSQ
Sbjct: 61  LRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQ 120

Query: 167 LLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGG 226
           LLLLDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG G
Sbjct: 121 LLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAG 180

Query: 227 TKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQK 286
           TKGKR AMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNNVT II+  T   FE+V K
Sbjct: 181 TKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLK 240

Query: 287 DIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPRKFLTPDVP 341
           DIDRDRYMSPIEAVEYGLIDGVID D IIPL PVP+RVK  +NYEEISKDP KFLTP++P
Sbjct: 241 DIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIP 292

[Close]

BLAST of CcUC10G186990.1 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 195.3 bits (495), Expect = 8.1e-50
Identity = 111/247 (44.94%), Postives = 156/247 (63.16%), Query Frame = 0


Query: 70  GKPSNF------FPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSV----LMTGPQTPDA 129
           GK  NF       PK        S+ S+ K     P +TL+    V    + +  Q+P  
Sbjct: 22  GKNLNFPIRNHRIPKTSKPFCVRSSMSLSK----PPRQTLSSNWDVSSFSIDSVAQSPSR 81

Query: 130 ARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSL 189
                E D   +L R+RIVFLG+ +DD  AD ++SQLLLLDA+DS +DI LFINS GGS+
Sbjct: 82  LPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSI 141

Query: 190 SATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG 249
           +A M IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++M+HQPLG A G
Sbjct: 142 TAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGG 201

Query: 250 QAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID 305
           +A ++ I+ RE+M++K  + +I S  TG P  +++ D DRD +++P EA EYGLID VID
Sbjct: 202 KATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 261

[Close]

BLAST of CcUC10G186990.1 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-45
Identity = 88/167 (52.69%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 132 LFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQL 191
           LF+ RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS++A MAI+D ++ 
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178

Query: 192 VRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREI 251
           +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+HQPLGGA G   D++IQA E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238

Query: 252 MHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI 299
           +H+K N+   ++  TG   EK+ +D DRD +MS  EA EYGLIDGVI
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of CcUC10G186990.1 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 160.6 bits (405), Expect = 2.2e-39
Identity = 78/188 (41.49%), Postives = 116/188 (61.70%), Query Frame = 0


Query: 114 PQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFIN 173
           P  P     G   D   +LFR RI+F+G  I+  VA  ++SQL+ L + D   DI +++N
Sbjct: 83  PVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLN 142

Query: 174 SAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQP 233
             GGS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP
Sbjct: 143 CPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQP 202

Query: 234 LGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGL 293
             G  G   DV  Q  E +  +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+GL
Sbjct: 203 QTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGL 262

Query: 294 IDGVIDKD 302
           IDG+++ +
Sbjct: 263 IDGLLETE 270

[Close]

BLAST of CcUC10G186990.1 vs. TAIR 10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-38
Identity = 89/245 (36.33%), Postives = 135/245 (55.10%), Query Frame = 0


Query: 73  SNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTG----------------PQT 132
           S +   LK+ LS + + S +K     PS    P  ++L +                 P  
Sbjct: 44  SPYGDSLKAGLSSNVSGSPIKIDNKAPSSLPLPILNILKSSTVYFIFGVIEAKKGNPPVM 103

Query: 133 PDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAG 192
           P     G   D   +LFR RI+F+G  I+  VA  ++SQL+ L + D   DI +++N  G
Sbjct: 104 PSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPG 163

Query: 193 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGG 252
           GS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G
Sbjct: 164 GSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTG 223

Query: 253 ASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDG 302
             G   DV  Q  E +  +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG
Sbjct: 224 CGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDG 283

The following BLAST results are available for this feature:

BLAST of CcUC10G186990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448589.1	3.2e-149	95.92	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
XP_038876611.1	3.5e-148	95.24	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispi...	[more]
XP_022923515.1	3.9e-147	93.60	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita ...	[more]
XP_022145352.1	1.5e-146	94.22	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica chara...	[more]
KAG7015794.1	4.3e-146	93.88	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyr...	[more]

BLAST of CcUC10G186990.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B60	6.8e-102	67.87	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis t...	[more]
Q3ANI8	4.0e-54	54.74	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC...	[more]
Q3B0U1	9.0e-54	54.21	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC...	[more]
Q7UA36	2.9e-52	53.16	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH...	[more]
Q7V992	3.8e-52	54.55	ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (str...	[more]

BLAST of CcUC10G186990.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJF4	1.5e-149	95.92	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1EC18	1.9e-147	93.60	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1CWB9	7.2e-147	94.22	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1HNH6	2.2e-143	92.52	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0L3S1	1.3e-140	90.48	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of CcUC10G186990.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45390.1	4.8e-103	67.87	CLP protease P4	[more]
AT1G66670.1	8.1e-50	44.94	CLP protease proteolytic subunit 3	[more]
AT1G02560.1	1.6e-45	52.69	nuclear encoded CLP protease 5	[more]
AT1G11750.1	2.2e-39	41.49	CLP protease proteolytic subunit 6	[more]
AT1G11750.2	1.1e-38	36.33	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 127..142 score: 44.38 coord: 198..215 score: 50.56 coord: 167..187 score: 54.88 coord: 219..238 score: 57.75 coord: 276..295 score: 56.38
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 112..301 score: 36.481956
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 127..297 e-value: 3.60457E-97 score: 283.178
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 126..300 e-value: 4.4E-71 score: 238.5
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 100..337
None	No IPR available	GENE3D	3.90.226.10		coord: 110..302 e-value: 2.5E-68 score: 231.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR10381:SF24	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTIC	coord: 100..337
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 220..233
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 126..303

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G186990	CcUC10G186990	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G186990.1-exon	CcUC10G186990.1-exon-CicolChr10:984810..985367	exon
CcUC10G186990.1-exon	CcUC10G186990.1-exon-CicolChr10:988172..988825	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G186990.1-five_prime_utr	CcUC10G186990.1-five_prime_utr-CicolChr10:984810..984828	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G186990.1-cds	CcUC10G186990.1-cds-CicolChr10:984829..985367	CDS
CcUC10G186990.1-cds	CcUC10G186990.1-cds-CicolChr10:988172..988655	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G186990.1-three_prime_utr	CcUC10G186990.1-three_prime_utr-CicolChr10:988656..988825	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G186990.1	CcUC10G186990.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0051117	ATPase binding